F430359

General Info

Members Datasets Scaffolds Average Seq Length
385 253 318 658

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2881101125|2881102110
Length 689
Sequence RNIEADLSRFRLRVLVASVVVLVCFLLLVARLVWLQVVRHEQFSERAEANRTAVVPVVPNRGLILDRNGIVLATNYSAYTLEITPSRLQAPLEDTINALSRIVEIQPRDRRRFRKLLDESKSFESLPIRTKLNEEEVARFTAQRFRFPGVDIRARLFRNYPWGELGSHVIGYIGRINQAEKKAMEEWDEEVQANYRGTEYIGKLGVEQSLEQRLHGTTGVEELETSAGGRAVRKLASLPATPGDTVMLSIDIKLQHLVEQMFGPRRGALVALDPKSGEVLAFVSKPTFDPNLFVDGIDSENWQALNESLDKPLLNRALRGTYPPGSTYKPFMALAALETGKRTAGQIIQDNGSWSFGGHVFRSHGDHGLGPVDLHVSIVKSSNVYYYSLANEMGVDAMHDFMKPLGFGQLTGIDIPGEVRGILPSQEWKRNYYRRPEQKKWFAGETISLGIGQGYNSFTMLQLAHATATLVNGGIKHKPRLVIATQDPVSHQTEPLPLEPGVNLNYKPQHVEAVRRAMVGVTQGGTSTRVFAGSPYLSGGKTGTAQAVTIGQRQKYDAAKLEEHQRDHSLYIAFAPADDPKIAVAVVVENAGFGAAAAAPIARRVFDYWLAGLYPSEEDLAAVQKGQAAAPVGKQRPAAEVAWPPGAAAAEAAAAAARTPAPTAAAATTAPRSALVPTAARRAPRQPAR

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
3 2547132374 Acidovorax radicis N35 Isolate Unclassified
4 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
5 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
6 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
7 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
8 2643221570 Acidovorax sp. Root568 Isolate Unclassified
9 2643221596 Acidovorax sp. Root70 Isolate Unclassified
10 2643221609 Acidovorax sp. Root217 Isolate Unclassified
11 2643221611 Acidovorax sp. Root219 Isolate Unclassified
12 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
13 2643221652 Acidovorax sp. Root402 Isolate Unclassified
14 2643221658 Variovorax sp. Root411 Isolate Unclassified
15 2643221672 Variovorax sp. Root434 Isolate Unclassified
16 2643221683 Variovorax sp. Root473 Isolate Unclassified
17 2643221717 Acidovorax sp. Root267 Isolate Unclassified
18 2721755523 Delftia sp. HK171 Isolate Unclassified
19 2738541277 Variovorax sp. GV051 Isolate Unclassified
20 2738541307 Variovorax sp. GV008 Isolate Unclassified
21 2738543012 Acidovorax sp. CF301 Isolate Unclassified
22 2738543013 Variovorax sp. BT01 Isolate Unclassified
23 2738543019 Variovorax sp. GV040 Isolate Unclassified
24 2816332133 Acidovorax radicis 2721A Isolate Unclassified
25 2818991446 Variovorax sp. 1180 Isolate Unclassified
26 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
27 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
28 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
29 2842677519 Variovorax sp. R-72495 Isolate Unclassified
30 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
31 2842733646 Variovorax sp. R-72446 Isolate Unclassified
32 2842747753 Variovorax sp. R-72060 Isolate Unclassified
33 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
34 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
35 2885198086 Variovorax sp. 679 Isolate Unclassified
36 2885211737 Variovorax sp. 553 Isolate Unclassified
37 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
38 2899924645 Variovorax sp. 369 Isolate Unclassified
39 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
40 2904456579 Variovorax sp. 2002 Isolate Unclassified
41 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
42 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
43 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
44 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
45 2928037797 Variovorax sp. 1126 Isolate Unclassified
46 2928044640 Variovorax sp. 1128 Isolate Unclassified
47 2928051484 Variovorax sp. 1133 Isolate Unclassified
48 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
49 2928070936 Variovorax gossypii 1167 Isolate Unclassified
50 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
51 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
52 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
53 2929520902 Variovorax beijingensis 502 Isolate Unclassified
54 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
55 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
56 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
57 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
58 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
59 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
60 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
61 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
62 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
63 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
64 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
65 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
66 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
67 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
68 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
69 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
70 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
71 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
72 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
73 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
74 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
75 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
76 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
77 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
78 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
79 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
80 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
81 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
82 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
83 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
84 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
85 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
86 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
87 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
88 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
89 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
90 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
91 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
92 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
93 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
94 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
95 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
96 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
97 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
98 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
99 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
100 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
101 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
102 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
103 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
104 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
105 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
106 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
107 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
108 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
109 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
110 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
111 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
112 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
113 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
114 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
115 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
116 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
117 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
118 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
119 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
120 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
121 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
122 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
123 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
124 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
125 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
126 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
130 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
131 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
132 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
134 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
135 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
136 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
137 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
138 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
139 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
141 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
142 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
143 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
145 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
146 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
147 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
148 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
150 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
163 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
165 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
166 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
167 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
168 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
169 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
170 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
171 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
172 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
173 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
174 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
175 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
176 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
177 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
178 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
179 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
180 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
181 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
182 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
183 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
184 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
185 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
186 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
187 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
188 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
189 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
190 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
191 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
192 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
193 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
194 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
195 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
196 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
197 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
198 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
199 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
200 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
201 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
202 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
203 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
204 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
205 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
206 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
207 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
208 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
209 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
210 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
211 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
212 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
213 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
214 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
215 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
216 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
217 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
218 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
219 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
220 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
221 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
222 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
223 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
224 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
225 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
226 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
227 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
228 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
229 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
230 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
231 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
232 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
233 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
234 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
235 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
236 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
237 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
238 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
239 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
240 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
241 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
242 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
243 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
244 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
245 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
246 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
247 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
248 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
249 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
250 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
251 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
252 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
253 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.6
Metatranscriptomes 0
Isolates 17.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 34.29
Nodule 1.56
Rhizoplane 2.6
Rhizosphere 42.34
Stem 0
Stem Tuber 0
Unclassified 19.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10010715 3300001989 Bacteria 3399
2 JGI25155J39150_1000009 3300002704 Bacteria 224358
3 JGI25156J39149_1000009 3300002705 Bacteria 224379
4 JGI25154J39366_1000024 3300002738 Bacteria 211372
5 JGI25157J39369_1000007 3300002741 Bacteria 224377
6 JGI25159J45721_1000286 3300002987 Bacteria 23822
7 JGI25159J45721_1006037 3300002987 Bacteria 3691
8 JGI25151J46595_10019503 3300003187 Bacteria 2880
9 JGI25151J46595_10023635 3300003187 Bacteria 2528
10 JGI25153J46596_10012121 3300003215 Bacteria 3752
11 JGI25160J50197_1000242 3300003354 Bacteria 42399
12 JGI25161J50226_1000009 3300003374 Bacteria 224699
13 Ga0055535_1000158 3300003761 Bacteria 72697
14 Ga0055542_1000013 3300003762 Bacteria 387560
15 Ga0055526_1000764 3300003771 Bacteria 24002
16 Ga0055526_1002603 3300003771 Bacteria 12065
17 Ga0055537_1000235 3300003773 Bacteria 40558
18 Ga0055537_1000487 3300003773 Bacteria 24424
19 Ga0055524_1000143 3300003775 Bacteria 84686
20 Ga0055536_1000258 3300003781 Bacteria 41836
21 Ga0055536_1002402 3300003781 Bacteria 10534
22 Ga0055536_1005743 3300003781 Bacteria 5977
23 Ga0055536_1006989 3300003781 Bacteria 5134
24 Ga0055536_1010919 3300003781 Bacteria 3541
25 Ga0055534_1000037 3300003784 Bacteria 107072
26 Ga0055534_1000612 3300003784 Bacteria 18479
27 Ga0055528_1000994 3300003790 Bacteria 18821
28 Ga0055528_1002471 3300003790 Bacteria 9882
29 Ga0055530_10000474 3300003791 Bacteria 34978
30 Ga0055530_10004947 3300003791 Bacteria 6594
31 Ga0055530_10013307 3300003791 Bacteria 2815
32 Ga0055540_1000027 3300003792 Bacteria 187454
33 Ga0055540_1001077 3300003792 Bacteria 17342
34 Ga0055540_1007020 3300003792 Bacteria 4341
35 Ga0055531_10000465 3300003794 Bacteria 37499
36 Ga0055531_10007440 3300003794 Bacteria 5977
37 Ga0065165_1004502 3300005262 Bacteria 8567
38 Ga0065704_10073175 3300005289 Bacteria 7503
39 Ga0065704_10086250 3300005289 Bacteria 3140
40 Ga0070674_100020283 3300005356 Bacteria 4242
41 Ga0070673_100078219 3300005364 Bacteria 2675
42 Ga0070667_100075831 3300005367 Bacteria 2871
43 Ga0070678_100078126 3300005456 Bacteria 2499
44 Ga0068867_100001075 3300005459 Bacteria 18682
45 Ga0070679_100137965 3300005530 Bacteria 2420
46 Ga0068853_100057834 3300005539 Bacteria 3347
47 Ga0070672_100045307 3300005543 Bacteria 3401
48 Ga0070665_100053767 3300005548 Bacteria 4038
49 Ga0068855_100004439 3300005563 Bacteria 17139
50 Ga0070664_100008943 3300005564 Bacteria 8120
51 Ga0068857_100086401 3300005577 Bacteria 2805
52 Ga0068866_10005432 3300005718 Bacteria 5259
53 Ga0068861_100008665 3300005719 Bacteria 6996
54 Ga0068858_100088036 3300005842 Bacteria 2889
55 Ga0068860_100004588 3300005843 Bacteria 14099
56 Ga0068862_100000732 3300005844 Bacteria 33138
57 Ga0068862_100016050 3300005844 Bacteria 6228
58 Ga0068862_100058111 3300005844 Bacteria 3318
59 Ga0075365_10008732 3300006038 Bacteria 5775
60 Ga0075365_10054242 3300006038 Bacteria 2657
61 Ga0075363_100015359 3300006048 Bacteria 3762
62 Ga0075364_10008817 3300006051 Bacteria 6037
63 Ga0075364_10070822 3300006051 Bacteria 2296
64 Ga0075432_10009976 3300006058 Bacteria 3226
65 Ga0075432_10011070 3300006058 Bacteria 3064
66 Ga0075362_10001128 3300006177 Bacteria 8314
67 Ga0075367_10031158 3300006178 Bacteria 3061
68 Ga0075366_10004504 3300006195 Bacteria 7476
69 Ga0075370_10017163 3300006353 Bacteria 3907
70 Ga0079104_1000170 3300006946 Bacteria 92339
71 Ga0099826_10012901 3300006948 Bacteria 6298
72 Ga0105244_10012240 3300009036 Bacteria 5082
73 Ga0105250_10000214 3300009092 Bacteria 47939
74 Ga0105240_10051706 3300009093 Bacteria 5168
75 Ga0105243_10000400 3300009148 Bacteria 45768
76 Ga0105243_10001608 3300009148 Bacteria 19691
77 Ga0105243_10002697 3300009148 Bacteria 14746
78 Ga0105243_10010658 3300009148 Bacteria 6972
79 Ga0105242_10000638 3300009176 Bacteria 27494
80 Ga0157370_10009234 3300013104 Bacteria 10569
81 Ga0157370_10076635 3300013104 Bacteria 3150
82 Ga0163162_10002515 3300013306 Bacteria 17338
83 Ga0157375_10102234 3300013308 Bacteria 2950
84 Ga0182008_10000075 3300014497 Bacteria 77531
85 Ga0182008_10002475 3300014497 Bacteria 11559
86 Ga0182008_10008195 3300014497 Bacteria 5721
87 Ga0182007_10005083 3300015262 Bacteria 5842
88 Ga0183362_10004 3300015683 Bacteria 569303
89 Ga0163161_10003838 3300017792 Bacteria 10536
90 Ga0163161_10059240 3300017792 Bacteria 2784
91 Ga0209435_100051 3300025206 Bacteria 90866
92 Ga0209672_100583 3300025228 Bacteria 19381
93 Ga0209147_100596 3300025229 Bacteria 19916
94 Ga0209258_100020 3300025242 Bacteria 565241
95 Ga0207425_1000708 3300025245 Bacteria 17958
96 Ga0207425_1002676 3300025245 Bacteria 6107
97 Ga0209646_1000029 3300025246 Bacteria 386414
98 Ga0209026_1000016 3300025250 Bacteria 386457
99 Ga0209148_1000031 3300025254 Bacteria 564601
100 Ga0209759_1000016 3300025256 Bacteria 386414
101 Ga0209129_1000055 3300025258 Bacteria 261708
102 Ga0209129_1004917 3300025258 Bacteria 4978
103 Ga0209565_1000122 3300025263 Bacteria 111132
104 Ga0209565_1000131 3300025263 Bacteria 107341
105 Ga0209565_1000310 3300025263 Bacteria 45322
106 Ga0209565_1000373 3300025263 Bacteria 38291
107 Ga0209673_1000170 3300025273 Bacteria 133933
108 Ga0209673_1000302 3300025273 Bacteria 91221
109 Ga0209673_1000502 3300025273 Bacteria 64647
110 Ga0209673_1000812 3300025273 Bacteria 41302
111 Ga0209130_1000014 3300025284 Bacteria 412039
112 Ga0209130_1000457 3300025284 Bacteria 42999
113 Ga0209130_1000487 3300025284 Bacteria 40823
114 Ga0209130_1000495 3300025284 Bacteria 40276
115 Ga0209130_1003224 3300025284 Bacteria 7171
116 Ga0209675_1000055 3300025291 Bacteria 193129
117 Ga0209675_1000098 3300025291 Bacteria 130512
118 Ga0209675_1005625 3300025291 Bacteria 5190
119 Ga0209675_1010824 3300025291 Bacteria 3077
120 Ga0209676_1000013 3300025292 Bacteria 816080
121 Ga0209676_1000040 3300025292 Bacteria 438184
122 Ga0209676_1000071 3300025292 Bacteria 309464
123 Ga0209676_1001865 3300025292 Bacteria 17343
124 Ga0209676_1002233 3300025292 Bacteria 14333
125 Ga0209676_1002860 3300025292 Bacteria 11384
126 Ga0209025_1000409 3300025294 Bacteria 86577
127 Ga0209025_1002900 3300025294 Bacteria 17118
128 Ga0209025_1003811 3300025294 Bacteria 13774
129 Ga0209025_1004202 3300025294 Bacteria 12704
130 Ga0209025_1005102 3300025294 Bacteria 10921
131 Ga0209025_1005897 3300025294 Bacteria 9789
132 Ga0209025_1006236 3300025294 Bacteria 9343
133 Ga0209025_1007537 3300025294 Bacteria 8082
134 Ga0209025_1011882 3300025294 Bacteria 5667
135 Ga0209025_1016857 3300025294 Bacteria 4268
136 Ga0209564_1000803 3300025295 Bacteria 42999
137 Ga0209564_1000832 3300025295 Bacteria 41822
138 Ga0209564_1001169 3300025295 Bacteria 30538
139 Ga0209564_1001202 3300025295 Bacteria 29560
140 Ga0209758_1000042 3300025297 Bacteria 407145
141 Ga0209758_1010183 3300025297 Bacteria 5679
142 Ga0209050_1000008 3300025298 Bacteria 1144179
143 Ga0209050_1000021 3300025298 Bacteria 574406
144 Ga0209050_1002039 3300025298 Bacteria 18656
145 Ga0209050_1005170 3300025298 Bacteria 8357
146 Ga0209050_1007563 3300025298 Bacteria 6052
147 Ga0209050_1018911 3300025298 Bacteria 2650
148 Ga0209256_1000039 3300025299 Bacteria 372337
149 Ga0209256_1000056 3300025299 Bacteria 283044
150 Ga0209256_1000124 3300025299 Bacteria 165390
151 Ga0207426_1000055 3300025302 Bacteria 374450
152 Ga0207426_1000079 3300025302 Bacteria 314709
153 Ga0207426_1000224 3300025302 Bacteria 130233
154 Ga0209051_1000005 3300025303 Bacteria 1142353
155 Ga0209051_1000028 3300025303 Bacteria 404269
156 Ga0209051_1000126 3300025303 Bacteria 142582
157 Ga0209051_1000261 3300025303 Bacteria 87969
158 Ga0209051_1000446 3300025303 Bacteria 55218
159 Ga0209051_1000468 3300025303 Bacteria 52954
160 Ga0209051_1007113 3300025303 Bacteria 6181
161 Ga0209257_1000031 3300025304 Bacteria 688770
162 Ga0209257_1000043 3300025304 Bacteria 512127
163 Ga0209257_1001377 3300025304 Bacteria 29185
164 Ga0209257_1004235 3300025304 Bacteria 11335
165 Ga0209257_1007858 3300025304 Bacteria 6285
166 Ga0209257_1012577 3300025304 Bacteria 3892
167 Ga0207656_10005158 3300025321 Bacteria 4594
168 Ga0207655_1001192 3300025728 Bacteria 25155
169 Ga0207642_10002721 3300025899 Bacteria 5517
170 Ga0207695_10112926 3300025913 Bacteria 2694
171 Ga0207657_10028298 3300025919 Bacteria 5115
172 Ga0207649_10034790 3300025920 Bacteria 3021
173 Ga0207652_10038105 3300025921 Bacteria 4073
174 Ga0207681_10013562 3300025923 Bacteria 5048
175 Ga0207694_10041908 3300025924 Bacteria 3529
176 Ga0207706_10014656 3300025933 Bacteria 7099
177 Ga0207686_10006359 3300025934 Bacteria 6356
178 Ga0207709_10000038 3300025935 Bacteria 266638
179 Ga0207709_10000405 3300025935 Bacteria 42204
180 Ga0207709_10000540 3300025935 Bacteria 32468
181 Ga0207709_10000599 3300025935 Bacteria 30037
182 Ga0207691_10061955 3300025940 Bacteria 3396
183 Ga0207689_10100579 3300025942 Bacteria 2375
184 Ga0207679_10015144 3300025945 Bacteria 5087
185 Ga0207639_10038604 3300026041 Bacteria 3553
186 Ga0207702_10037526 3300026078 Bacteria 4057
187 Ga0207648_10001410 3300026089 Bacteria 26468
188 Ga0207674_10017016 3300026116 Bacteria 7938
189 Ga0207675_100025098 3300026118 Bacteria 5548
190 Ga0207683_10076088 3300026121 Bacteria 2972
191 Ga0209281_1000072 3300027111 Bacteria 273114
192 Ga0209970_1000162 3300027614 Bacteria 10390
193 Ga0209282_1000139 3300027666 Bacteria 42847
194 Ga0209971_1000546 3300027682 Bacteria 9856
195 Ga0209974_10003485 3300027876 Bacteria 5671
196 Ga0209974_10006381 3300027876 Bacteria 4117
197 Ga0268265_10003594 3300028380 Bacteria 11073
198 Ga0268265_10020436 3300028380 Bacteria 4621
199 Ga0268264_10013682 3300028381 Bacteria 6679
200 Ga0307515_10000013 3300028794 Bacteria 568456
201 Ga0307515_10000322 3300028794 Bacteria 118563
202 Ga0314311_1017790 3300030733 Bacteria 3641
203 Ga0316180_1035995 3300030736 Bacteria 4131
204 Ga0316183_1000702 3300030742 Bacteria 7278
205 Ga0265330_10000037 3300031235 Bacteria 120957
206 Ga0265332_10000008 3300031238 Bacteria 301609
207 Ga0265332_10000243 3300031238 Bacteria 43281
208 Ga0265332_10002309 3300031238 Bacteria 9747
209 Ga0265327_10000147 3300031251 Bacteria 153254
210 Ga0265327_10002224 3300031251 Bacteria 21112
211 Ga0265327_10014179 3300031251 Bacteria 5231
212 Ga0307513_10000013 3300031456 Bacteria 325682
213 Ga0307513_10000194 3300031456 Bacteria 87921
214 Ga0307408_100000298 3300031548 Bacteria 47947
215 Ga0307408_100050258 3300031548 Bacteria 2997
216 Ga0307408_100120379 3300031548 Bacteria 2032
217 Ga0265314_10000065 3300031711 Bacteria 158383
218 Ga0265314_10005800 3300031711 Bacteria 11071
219 Ga0307405_10003306 3300031731 Bacteria 7376
220 Ga0307406_10006328 3300031901 Bacteria 6532
221 Ga0307412_10011873 3300031911 Bacteria 5058
222 Ga0307412_10025267 3300031911 Bacteria 3677
223 Ga0307416_100036501 3300032002 Bacteria 3770
224 Ga0395899_0005887 3300037312 Bacteria 9513
225 Ga0395898_0013488 3300037466 Bacteria 8414
226 Ga0395905_0000390 3300037471 Bacteria 62192
227 Ga0395905_0001234 3300037471 Bacteria 31751
228 Ga0395905_0013583 3300037471 Bacteria 7801
229 Ga0395905_0076376 3300037471 Bacteria 3139
230 Ga0395905_0081895 3300037471 Bacteria 3024
231 Ga0395901_0090910 3300038443 Bacteria 3195
232 Ga0395901_0122857 3300038443 Bacteria 2728
233 Ga0439436_0002764 3300041404 Bacteria 5306
234 Ga0439445_0001304 3300042004 Bacteria 5391
235 Ga0439445_0001691 3300042004 Bacteria 4840
236 Ga0439449_0001783 3300042007 Bacteria 8469
237 Ga0439449_0007227 3300042007 Bacteria 4224
238 Ga0439452_006961 3300042010 Bacteria 3500
239 Ga0439462_0001360 3300042015 Bacteria 5403
240 Ga0450911_001015 3300042115 Bacteria 7158
241 Ga0450906_004904 3300042145 Bacteria 2779
242 Ga0450908_001052 3300042184 Bacteria 5353
243 Ga0450918_000544 3300042531 Bacteria 8047
244 Ga0451577_0000191 3300042876 Bacteria 128991
245 Ga0451577_0031378 3300042876 Bacteria 4794
246 Ga0466969_0016229 3300044656 Bacteria 3900
247 Ga0466966_0015277 3300044684 Bacteria 5077
248 Ga0466961_0026985 3300044693 Bacteria 3692
249 Ga0453684_0000590 3300044712 Bacteria 134718
250 Ga0453684_0012562 3300044712 Bacteria 13940
251 Ga0451576_0009688 3300045051 Bacteria 11145
252 Ga0451576_0011263 3300045051 Bacteria 10180
253 Ga0451576_0011961 3300045051 Bacteria 9807
254 Ga0495627_006231 3300046453 Bacteria 4692
255 Ga0495638_0009609 3300046460 Bacteria 6770
256 Ga0495639_0007969 3300046475 Bacteria 4551
257 Ga0495631_0000101 3300046518 Bacteria 57202
258 Ga0495642_0024871 3300046528 Bacteria 2370
259 Ga0495654_0004563 3300046530 Bacteria 8190
260 Ga0495597_0000060 3300046542 Bacteria 92172
261 Ga0495633_0002482 3300046558 Bacteria 13006
262 Ga0495656_0001081 3300046615 Bacteria 8830
263 Ga0495668_0029635 3300046616 Bacteria 3091
264 Ga0495625_0000136 3300046660 Bacteria 114576
265 Ga0495625_0014946 3300046660 Bacteria 6169
266 Ga0495625_0047354 3300046660 Bacteria 3100
267 Ga0495671_0007080 3300046692 Bacteria 6420
268 Ga0496101_0055471 3300048904 Bacteria 2862
269 Ga0496102_0007175 3300048905 Bacteria 9513
270 Ga0496104_0115241 3300048907 Bacteria 2578
271 Ga0496109_0043408 3300048912 Bacteria 4075
272 Ga0496109_0055082 3300048912 Bacteria 3628
273 Ga0496110_0032548 3300048913 Bacteria 4504
274 Ga0496111_0071879 3300048914 Bacteria 2518
275 Ga0496116_0027074 3300048919 Bacteria 4178
276 Ga0496117_0027687 3300048920 Bacteria 4408
277 Ga0496117_0050129 3300048920 Bacteria 2962
278 Ga0496118_0023617 3300048921 Bacteria 5334
279 Ga0496118_0026855 3300048921 Bacteria 4891
280 Ga0496121_0017130 3300048924 Bacteria 7423
281 Ga0496121_0033939 3300048924 Bacteria 4604
282 Ga0496121_0041268 3300048924 Bacteria 4036
283 Ga0496122_0001604 3300048925 Bacteria 35387
284 Ga0496122_0026830 3300048925 Bacteria 4948
285 Ga0496123_0000329 3300048926 Bacteria 90380
286 Ga0496123_0020775 3300048926 Bacteria 5124
287 Ga0496124_0019190 3300048927 Bacteria 6376
288 Ga0496124_0030764 3300048927 Bacteria 4758
289 Ga0496125_0006190 3300048928 Bacteria 13033
290 Ga0496125_0020182 3300048928 Bacteria 6262
291 Ga0496125_0022572 3300048928 Bacteria 5838
292 Ga0496125_0025615 3300048928 Bacteria 5397
293 Ga0496125_0033203 3300048928 Bacteria 4572
294 Ga0496125_0045279 3300048928 Bacteria 3706
295 Ga0496125_0078151 3300048928 Bacteria 2545
296 Ga0501031_0004553 3300049568 Bacteria 8991
297 Ga0501034_0052145 3300049571 Bacteria 4122
298 Ga0501036_0118409 3300049572 Bacteria 2237
299 Ga0501080_0037872 3300049742 Bacteria 4503
300 Ga0501262_000115 3300049759 Bacteria 9904
301 nmdc:mga00v17_25978_c1 3300050491 Bacteria 3407
302 nmdc:mga0yw44_58589_c1 3300050492 Bacteria 2353
303 nmdc:mga0k408_15361_c1 3300050493 Bacteria 4233
304 nmdc:mga0k408_1885_c1 3300050493 Bacteria 5002
305 nmdc:mga07m45_18301_c1 3300050496 Bacteria 3779
306 Ga0500644_0000898 3300053088 Bacteria 9580
307 Ga0500651_0000136 3300053093 Bacteria 45911
308 Ga0500571_000102 3300053110 Bacteria 28122
309 Ga0500593_000328 3300053117 Bacteria 19163
310 Ga0500658_0000168 3300053134 Bacteria 31129
311 Ga0500658_0000433 3300053134 Bacteria 17977
312 Ga0500559_0000570 3300053136 Bacteria 25507
313 Ga0500559_0008213 3300053136 Bacteria 4589
314 Ga0500568_0002066 3300053139 Bacteria 12169
315 Ga0500568_0019035 3300053139 Bacteria 2993
316 Ga0500616_0014180 3300053153 Bacteria 4588
317 Ga0500627_0000763 3300053158 Bacteria 8564
318 Ga0500645_001273 3300053730 Bacteria 13201

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048920 Ga0496117_0050129 Ga0496117_0050129_18_1715 564
2 3300046558 Ga0495633_0002482 Ga0495633_0002482_2313_4265 613
3 3300048928 Ga0496125_0033203 Ga0496125_0033203_1870_3762 624
4 3300046530 Ga0495654_0004563 Ga0495654_0004563_1740_3683 627
5 iso_pu_bacteria 2643221717 2644646452 627
6 3300031238 Ga0265332_10000243 Ga0265332_1000024312 631
7 3300049568 Ga0501031_0004553 Ga0501031_0004553_261_2222 632
8 3300005548 Ga0070665_100053767 Ga0070665_1000537674 633
9 3300025919 Ga0207657_10028298 Ga0207657_100282982 638
10 iso_pu_bacteria 2932422444 2932425531 639
11 iso_pu_bacteria 2939631187 2939636336 639
12 3300042876 Ga0451577_0000191 Ga0451577_0000191_12347_14323 640
13 3300044712 Ga0453684_0000590 Ga0453684_0000590_18074_20050 640
14 3300045051 Ga0451576_0011263 Ga0451576_0011263_6251_8230 640
15 3300048924 Ga0496121_0033939 Ga0496121_0033939_857_2779 640
16 3300048928 Ga0496125_0045279 Ga0496125_0045279_796_2718 640
17 iso_pu_bacteria 2904479285 2904481185 640
18 3300005563 Ga0068855_100004439 Ga0068855_10000443912 641
19 3300025921 Ga0207652_10038105 Ga0207652_100381052 641
20 3300048928 Ga0496125_0022572 Ga0496125_0022572_1835_3898 642
21 3300053088 Ga0500644_0000898 Ga0500644_0000898_3011_5077 642
22 3300053117 Ga0500593_000328 Ga0500593_000328_2343_4409 642
23 iso_pu_bacteria 2547132374 2548501822 642
24 iso_pu_bacteria 2643221570 2643864064 642
25 iso_pu_bacteria 2643221596 2643992374 642
26 iso_pu_bacteria 2643221652 2644292279 642
27 iso_pu_bacteria 2842718218 2842720938 642
28 iso_pu_bacteria 2990710928 2990714595 642
29 3300002987 JGI25159J45721_1006037 JGI25159J45721_10060372 643
30 3300003771 Ga0055526_1000764 Ga0055526_10007644 643
31 3300003773 Ga0055537_1000235 Ga0055537_100023538 643
32 3300003775 Ga0055524_1000143 Ga0055524_100014353 643
33 3300003781 Ga0055536_1002402 Ga0055536_10024023 643
34 3300003784 Ga0055534_1000612 Ga0055534_10006124 643
35 3300003790 Ga0055528_1000994 Ga0055528_100099416 643
36 3300003791 Ga0055530_10000474 Ga0055530_1000047430 643
37 3300003792 Ga0055540_1000027 Ga0055540_1000027142 643
38 3300003794 Ga0055531_10000465 Ga0055531_1000046514 643
39 3300009093 Ga0105240_10051706 Ga0105240_100517062 643
40 3300025245 Ga0207425_1002676 Ga0207425_10026763 643
41 3300025263 Ga0209565_1000122 Ga0209565_100012271 643
42 3300025273 Ga0209673_1000302 Ga0209673_100030257 643
43 3300025284 Ga0209130_1000487 Ga0209130_100048739 643
44 3300025291 Ga0209675_1000098 Ga0209675_100009898 643
45 3300025292 Ga0209676_1000013 Ga0209676_1000013715 643
46 3300025294 Ga0209025_1003811 Ga0209025_10038112 643
47 3300025295 Ga0209564_1001169 Ga0209564_100116925 643
48 3300025298 Ga0209050_1000008 Ga0209050_1000008715 643
49 3300025299 Ga0209256_1000039 Ga0209256_1000039314 643
50 3300025303 Ga0209051_1000005 Ga0209051_1000005715 643
51 3300025304 Ga0209257_1000031 Ga0209257_1000031305 643
52 3300044656 Ga0466969_0016229 Ga0466969_0016229_126_2141 643
53 3300044684 Ga0466966_0015277 Ga0466966_0015277_953_2968 643
54 3300044693 Ga0466961_0026985 Ga0466961_0026985_1646_3661 643
55 3300050493 nmdc:mga0k408_1885_c1 nmdc:mga0k408_1885_c1_2208_4241 643
56 iso_pu_bacteria 2643221609 2644060042 644
57 iso_pu_bacteria 2643221611 2644072646 644
58 iso_pu_bacteria 2738543012 2739245670 644
59 iso_pu_bacteria 2816332133 2816470426 644
60 3300027682 Ga0209971_1000546 Ga0209971_10005467 645
61 3300027876 Ga0209974_10006381 Ga0209974_100063813 645
62 3300031235 Ga0265330_10000037 Ga0265330_1000003780 645
63 3300031238 Ga0265332_10000008 Ga0265332_1000000832 645
64 3300031711 Ga0265314_10000065 Ga0265314_10000065114 645
65 3300048913 Ga0496110_0032548 Ga0496110_0032548_805_2985 645
66 iso_pu_bacteria 2894023352 2894023477 645
67 3300006051 Ga0075364_10070822 Ga0075364_100708222 646
68 3300025294 Ga0209025_1005897 Ga0209025_10058978 646
69 3300027876 Ga0209974_10003485 Ga0209974_100034853 646
70 3300031548 Ga0307408_100000298 Ga0307408_10000029843 646
71 3300031901 Ga0307406_10006328 Ga0307406_100063284 646
72 3300042876 Ga0451577_0031378 Ga0451577_0031378_527_2584 646
73 3300045051 Ga0451576_0009688 Ga0451576_0009688_6186_8243 646
74 iso_pu_bacteria 2721755523 2722881185 646
75 iso_pu_bacteria 2839138175 2839141079 646
76 iso_pu_bacteria 2974320154 2974321182 646
77 3300003771 Ga0055526_1002603 Ga0055526_10026035 647
78 3300005530 Ga0070679_100137965 Ga0070679_1001379651 647
79 3300009176 Ga0105242_10000638 Ga0105242_100006384 647
80 3300025295 Ga0209564_1001202 Ga0209564_100120226 647
81 3300025934 Ga0207686_10006359 Ga0207686_100063594 647
82 3300046475 Ga0495639_0007969 Ga0495639_0007969_1844_3787 647
83 3300046528 Ga0495642_0024871 Ga0495642_0024871_179_2122 647
84 3300048907 Ga0496104_0115241 Ga0496104_0115241_584_2527 647
85 iso_pu_bacteria 2643221683 2644467871 647
86 3300025294 Ga0209025_1000409 Ga0209025_100040943 648
87 iso_pu_bacteria 2842733646 2842736875 648
88 iso_pu_bacteria 2919704043 2919708630 648
89 3300006058 Ga0075432_10011070 Ga0075432_100110701 649
90 iso_pu_bacteria 2511231002 2511246409 649
91 iso_pu_bacteria 2738541277 2738721069 649
92 iso_pu_bacteria 2738541307 2738881060 649
93 iso_pu_bacteria 2738543019 2739280268 649
94 3300006946 Ga0079104_1000170 Ga0079104_100017063 650
95 3300009092 Ga0105250_10000214 Ga0105250_1000021412 650
96 3300009148 Ga0105243_10002697 Ga0105243_1000269710 650
97 3300025935 Ga0207709_10000599 Ga0207709_100005996 650
98 3300027111 Ga0209281_1000072 Ga0209281_1000072194 650
99 3300044712 Ga0453684_0012562 Ga0453684_0012562_1068_3125 650
100 3300046542 Ga0495597_0000060 Ga0495597_0000060_62975_65065 650
101 3300003781 Ga0055536_1000258 Ga0055536_100025837 651
102 3300003781 Ga0055536_1006989 Ga0055536_10069894 651
103 3300003792 Ga0055540_1001077 Ga0055540_10010775 651
104 3300003792 Ga0055540_1007020 Ga0055540_10070202 651
105 3300005289 Ga0065704_10073175 Ga0065704_100731757 651
106 3300009148 Ga0105243_10000400 Ga0105243_1000040014 651
107 3300009148 Ga0105243_10001608 Ga0105243_1000160818 651
108 3300025292 Ga0209676_1000071 Ga0209676_100007174 651
109 3300025303 Ga0209051_1000261 Ga0209051_100026169 651
110 3300025304 Ga0209257_1004235 Ga0209257_10042353 651
111 3300025935 Ga0207709_10000038 Ga0207709_10000038186 651
112 3300027614 Ga0209970_1000162 Ga0209970_10001628 651
113 3300031238 Ga0265332_10002309 Ga0265332_100023099 651
114 3300037312 Ga0395899_0005887 Ga0395899_0005887_7006_9021 651
115 3300037466 Ga0395898_0013488 Ga0395898_0013488_3596_5611 651
116 3300037471 Ga0395905_0001234 Ga0395905_0001234_21437_23452 651
117 3300037471 Ga0395905_0013583 Ga0395905_0013583_5565_7592 651
118 3300037471 Ga0395905_0076376 Ga0395905_0076376_645_2660 651
119 3300038443 Ga0395901_0122857 Ga0395901_0122857_234_2249 651
120 3300048925 Ga0496122_0026830 Ga0496122_0026830_2760_4808 651
121 3300048926 Ga0496123_0020775 Ga0496123_0020775_1325_3373 651
122 3300048928 Ga0496125_0006190 Ga0496125_0006190_3525_5573 651
123 iso_pu_bacteria 2513020051 2513229242 651
124 iso_pu_bacteria 2599185214 2599622423 651
125 iso_pu_bacteria 2599185226 2599674485 651
126 iso_pu_bacteria 2599185227 2599680170 651
127 iso_pu_bacteria 2599185229 2599692186 651
128 iso_pu_bacteria 2643221628 2644160868 651
129 iso_pu_bacteria 2643221658 2644326542 651
130 iso_pu_bacteria 2643221672 2644396886 651
131 iso_pu_bacteria 2643221683 2644469434 651
132 iso_pu_bacteria 2738541277 2738719341 651
133 iso_pu_bacteria 2738541307 2738883314 651
134 iso_pu_bacteria 2738543013 2739247344 651
135 iso_pu_bacteria 2738543019 2739282928 651
136 iso_pu_bacteria 2818991446 2819599113 651
137 iso_pu_bacteria 2831265667 2831270899 651
138 iso_pu_bacteria 2838054893 2838058946 651
139 iso_pu_bacteria 2842677519 2842679268 651
140 iso_pu_bacteria 2842733646 2842738254 651
141 iso_pu_bacteria 2842747753 2842750746 651
142 iso_pu_bacteria 2881101125 2881102110 651
143 iso_pu_bacteria 2885192300 2885194646 651
144 iso_pu_bacteria 2885198086 2885202279 651
145 iso_pu_bacteria 2885211737 2885215932 651
146 iso_pu_bacteria 2899924645 2899929937 651
147 iso_pu_bacteria 2904449895 2904451639 651
148 iso_pu_bacteria 2904456579 2904461872 651
149 iso_pu_bacteria 2904541872 2904543331 651
150 iso_pu_bacteria 2919462493 2919464500 651
151 iso_pu_bacteria 2928037797 2928043472 651
152 iso_pu_bacteria 2928044640 2928049898 651
153 iso_pu_bacteria 2928051484 2928054465 651
154 iso_pu_bacteria 2928064002 2928070059 651
155 iso_pu_bacteria 2928070936 2928074332 651
156 iso_pu_bacteria 2928084124 2928086558 651
157 iso_pu_bacteria 2928115317 2928118888 651
158 iso_pu_bacteria 2929160207 2929160563 651
159 iso_pu_bacteria 2929520902 2929526558 651
160 iso_pu_bacteria 2945909444 2945915541 651
161 iso_pu_bacteria 2945945610 2945950442 651
162 iso_pu_bacteria 2945972063 2945974916 651
163 iso_pu_bacteria 2945984333 2945989049 651
164 iso_pu_bacteria 2954767861 2954770110 651
165 3300002987 JGI25159J45721_1000286 JGI25159J45721_10002864 652
166 3300003187 JGI25151J46595_10023635 JGI25151J46595_100236351 652
167 3300003354 JGI25160J50197_1000242 JGI25160J50197_100024240 652
168 3300003374 JGI25161J50226_1000009 JGI25161J50226_1000009187 652
169 3300005844 Ga0068862_100058111 Ga0068862_1000581112 652
170 3300006051 Ga0075364_10008817 Ga0075364_100088172 652
171 3300014497 Ga0182008_10000075 Ga0182008_1000007565 652
172 3300025258 Ga0209129_1004917 Ga0209129_10049172 652
173 3300025263 Ga0209565_1000373 Ga0209565_10003734 652
174 3300025284 Ga0209130_1000014 Ga0209130_100001441 652
175 3300025284 Ga0209130_1000495 Ga0209130_10004954 652
176 3300025294 Ga0209025_1005102 Ga0209025_10051029 652
177 3300025294 Ga0209025_1006236 Ga0209025_10062364 652
178 3300025297 Ga0209758_1010183 Ga0209758_10101834 652
179 3300025298 Ga0209050_1002039 Ga0209050_100203915 652
180 3300025298 Ga0209050_1005170 Ga0209050_10051706 652
181 3300025302 Ga0207426_1000224 Ga0207426_100022441 652
182 3300025913 Ga0207695_10112926 Ga0207695_101129262 652
183 3300025924 Ga0207694_10041908 Ga0207694_100419083 652
184 3300028380 Ga0268265_10020436 Ga0268265_100204363 652
185 3300031456 Ga0307513_10000194 Ga0307513_1000019411 652
186 3300031711 Ga0265314_10005800 Ga0265314_100058006 652
187 3300031731 Ga0307405_10003306 Ga0307405_100033062 652
188 3300045051 Ga0451576_0011961 Ga0451576_0011961_2077_4047 652
189 3300048920 Ga0496117_0027687 Ga0496117_0027687_1751_3739 652
190 3300048924 Ga0496121_0041268 Ga0496121_0041268_1533_3521 652
191 3300050491 nmdc:mga00v17_25978_c1 nmdc:mga00v17_25978_c1_475_2547 652
192 3300053136 Ga0500559_0000570 Ga0500559_0000570_880_2865 652
193 3300053139 Ga0500568_0019035 Ga0500568_0019035_77_2170 652
194 3300053730 Ga0500645_001273 Ga0500645_001273_8549_10627 652
195 3300002704 JGI25155J39150_1000009 JGI25155J39150_1000009180 653
196 3300002705 JGI25156J39149_1000009 JGI25156J39149_100000940 653
197 3300002738 JGI25154J39366_1000024 JGI25154J39366_100002440 653
198 3300002741 JGI25157J39369_1000007 JGI25157J39369_100000740 653
199 3300003187 JGI25151J46595_10019503 JGI25151J46595_100195032 653
200 3300005262 Ga0065165_1004502 Ga0065165_10045022 653
201 3300005356 Ga0070674_100020283 Ga0070674_1000202832 653
202 3300005367 Ga0070667_100075831 Ga0070667_1000758312 653
203 3300005456 Ga0070678_100078126 Ga0070678_1000781262 653
204 3300005459 Ga0068867_100001075 Ga0068867_10000107516 653
205 3300005543 Ga0070672_100045307 Ga0070672_1000453073 653
206 3300005718 Ga0068866_10005432 Ga0068866_100054324 653
207 3300005719 Ga0068861_100008665 Ga0068861_1000086652 653
208 3300005842 Ga0068858_100088036 Ga0068858_1000880362 653
209 3300005843 Ga0068860_100004588 Ga0068860_10000458814 653
210 3300005844 Ga0068862_100000732 Ga0068862_1000007322 653
211 3300005844 Ga0068862_100016050 Ga0068862_1000160504 653
212 3300006038 Ga0075365_10054242 Ga0075365_100542422 653
213 3300013306 Ga0163162_10002515 Ga0163162_100025156 653
214 3300013308 Ga0157375_10102234 Ga0157375_101022342 653
215 3300025206 Ga0209435_100051 Ga0209435_10005156 653
216 3300025246 Ga0209646_1000029 Ga0209646_1000029332 653
217 3300025250 Ga0209026_1000016 Ga0209026_1000016332 653
218 3300025256 Ga0209759_1000016 Ga0209759_1000016332 653
219 3300025291 Ga0209675_1010824 Ga0209675_10108241 653
220 3300025292 Ga0209676_1002860 Ga0209676_10028608 653
221 3300025294 Ga0209025_1004202 Ga0209025_10042028 653
222 3300025298 Ga0209050_1018911 Ga0209050_10189111 653
223 3300025303 Ga0209051_1007113 Ga0209051_10071133 653
224 3300025304 Ga0209257_1007858 Ga0209257_10078581 653
225 3300025304 Ga0209257_1012577 Ga0209257_10125772 653
226 3300025899 Ga0207642_10002721 Ga0207642_100027212 653
227 3300025935 Ga0207709_10000540 Ga0207709_100005404 653
228 3300025940 Ga0207691_10061955 Ga0207691_100619553 653
229 3300026089 Ga0207648_10001410 Ga0207648_100014106 653
230 3300026118 Ga0207675_100025098 Ga0207675_1000250982 653
231 3300026121 Ga0207683_10076088 Ga0207683_100760882 653
232 3300028380 Ga0268265_10003594 Ga0268265_100035947 653
233 3300028381 Ga0268264_10013682 Ga0268264_100136825 653
234 3300031456 Ga0307513_10000013 Ga0307513_1000001350 653
235 3300037471 Ga0395905_0000390 Ga0395905_0000390_26452_28467 653
236 3300042004 Ga0439445_0001691 Ga0439445_0001691_1300_3330 653
237 3300042115 Ga0450911_001015 Ga0450911_001015_2984_5014 653
238 3300048924 Ga0496121_0017130 Ga0496121_0017130_1757_3787 653
239 3300048927 Ga0496124_0030764 Ga0496124_0030764_1937_3967 653
240 3300048928 Ga0496125_0020182 Ga0496125_0020182_3258_5288 653
241 3300048928 Ga0496125_0025615 Ga0496125_0025615_1640_3670 653
242 3300050492 nmdc:mga0yw44_58589_c1 nmdc:mga0yw44_58589_c1_78_2153 653
243 3300014497 Ga0182008_10008195 Ga0182008_100081955 654
244 3300028794 Ga0307515_10000013 Ga0307515_10000013514 654
245 3300031251 Ga0265327_10000147 Ga0265327_10000147125 654
246 3300037471 Ga0395905_0081895 Ga0395905_0081895_402_2426 654
247 3300038443 Ga0395901_0090910 Ga0395901_0090910_754_2778 654
248 3300049571 Ga0501034_0052145 Ga0501034_0052145_1450_3462 654
249 3300049572 Ga0501036_0118409 Ga0501036_0118409_196_2208 654
250 3300049742 Ga0501080_0037872 Ga0501080_0037872_1328_3340 654
251 3300001989 JGI24739J22299_10010715 JGI24739J22299_100107153 655
252 3300003215 JGI25153J46596_10012121 JGI25153J46596_100121212 655
253 3300003761 Ga0055535_1000158 Ga0055535_100015831 655
254 3300003762 Ga0055542_1000013 Ga0055542_1000013165 655
255 3300003773 Ga0055537_1000487 Ga0055537_10004874 655
256 3300003781 Ga0055536_1005743 Ga0055536_10057434 655
257 3300003781 Ga0055536_1010919 Ga0055536_10109191 655
258 3300003784 Ga0055534_1000037 Ga0055534_10000374 655
259 3300003790 Ga0055528_1002471 Ga0055528_10024713 655
260 3300003791 Ga0055530_10004947 Ga0055530_100049474 655
261 3300003791 Ga0055530_10013307 Ga0055530_100133072 655
262 3300003794 Ga0055531_10007440 Ga0055531_100074404 655
263 3300005289 Ga0065704_10086250 Ga0065704_100862502 655
264 3300005364 Ga0070673_100078219 Ga0070673_1000782192 655
265 3300005539 Ga0068853_100057834 Ga0068853_1000578342 655
266 3300005564 Ga0070664_100008943 Ga0070664_1000089437 655
267 3300005577 Ga0068857_100086401 Ga0068857_1000864012 655
268 3300006038 Ga0075365_10008732 Ga0075365_100087322 655
269 3300006048 Ga0075363_100015359 Ga0075363_1000153592 655
270 3300006058 Ga0075432_10009976 Ga0075432_100099762 655
271 3300006177 Ga0075362_10001128 Ga0075362_100011284 655
272 3300006178 Ga0075367_10031158 Ga0075367_100311583 655
273 3300006195 Ga0075366_10004504 Ga0075366_100045043 655
274 3300006353 Ga0075370_10017163 Ga0075370_100171632 655
275 3300006948 Ga0099826_10012901 Ga0099826_100129014 655
276 3300009036 Ga0105244_10012240 Ga0105244_100122402 655
277 3300009148 Ga0105243_10010658 Ga0105243_100106584 655
278 3300013104 Ga0157370_10009234 Ga0157370_100092344 655
279 3300013104 Ga0157370_10076635 Ga0157370_100766352 655
280 3300014497 Ga0182008_10002475 Ga0182008_100024754 655
281 3300015262 Ga0182007_10005083 Ga0182007_100050833 655
282 3300015683 Ga0183362_10004 Ga0183362_10004521 655
283 3300017792 Ga0163161_10003838 Ga0163161_100038388 655
284 3300017792 Ga0163161_10059240 Ga0163161_100592402 655
285 3300025228 Ga0209672_100583 Ga0209672_1005834 655
286 3300025229 Ga0209147_100596 Ga0209147_1005968 655
287 3300025242 Ga0209258_100020 Ga0209258_100020321 655
288 3300025245 Ga0207425_1000708 Ga0207425_10007083 655
289 3300025254 Ga0209148_1000031 Ga0209148_1000031321 655
290 3300025258 Ga0209129_1000055 Ga0209129_1000055195 655
291 3300025263 Ga0209565_1000131 Ga0209565_100013194 655
292 3300025263 Ga0209565_1000310 Ga0209565_100031016 655
293 3300025273 Ga0209673_1000170 Ga0209673_100017094 655
294 3300025273 Ga0209673_1000502 Ga0209673_100050243 655
295 3300025273 Ga0209673_1000812 Ga0209673_100081210 655
296 3300025284 Ga0209130_1000457 Ga0209130_10004574 655
297 3300025284 Ga0209130_1003224 Ga0209130_10032246 655
298 3300025291 Ga0209675_1000055 Ga0209675_100005594 655
299 3300025291 Ga0209675_1005625 Ga0209675_10056253 655
300 3300025292 Ga0209676_1000040 Ga0209676_1000040221 655
301 3300025292 Ga0209676_1001865 Ga0209676_10018658 655
302 3300025292 Ga0209676_1002233 Ga0209676_100223312 655
303 3300025294 Ga0209025_1002900 Ga0209025_10029008 655
304 3300025294 Ga0209025_1007537 Ga0209025_10075375 655
305 3300025294 Ga0209025_1011882 Ga0209025_10118822 655
306 3300025294 Ga0209025_1016857 Ga0209025_10168573 655
307 3300025295 Ga0209564_1000803 Ga0209564_10008034 655
308 3300025295 Ga0209564_1000832 Ga0209564_10008324 655
309 3300025297 Ga0209758_1000042 Ga0209758_1000042165 655
310 3300025298 Ga0209050_1000021 Ga0209050_1000021172 655
311 3300025298 Ga0209050_1007563 Ga0209050_10075633 655
312 3300025299 Ga0209256_1000056 Ga0209256_1000056101 655
313 3300025299 Ga0209256_1000124 Ga0209256_100012439 655
314 3300025302 Ga0207426_1000055 Ga0207426_1000055166 655
315 3300025302 Ga0207426_1000079 Ga0207426_1000079170 655
316 3300025303 Ga0209051_1000028 Ga0209051_1000028340 655
317 3300025303 Ga0209051_1000126 Ga0209051_10001264 655
318 3300025303 Ga0209051_1000446 Ga0209051_100044623 655
319 3300025303 Ga0209051_1000468 Ga0209051_100046849 655
320 3300025304 Ga0209257_1000043 Ga0209257_1000043167 655
321 3300025304 Ga0209257_1001377 Ga0209257_100137727 655
322 3300025321 Ga0207656_10005158 Ga0207656_100051584 655
323 3300025728 Ga0207655_1001192 Ga0207655_10011929 655
324 3300025920 Ga0207649_10034790 Ga0207649_100347902 655
325 3300025923 Ga0207681_10013562 Ga0207681_100135623 655
326 3300025933 Ga0207706_10014656 Ga0207706_100146566 655
327 3300025935 Ga0207709_10000405 Ga0207709_1000040523 655
328 3300025942 Ga0207689_10100579 Ga0207689_101005791 655
329 3300025945 Ga0207679_10015144 Ga0207679_100151444 655
330 3300026041 Ga0207639_10038604 Ga0207639_100386042 655
331 3300026078 Ga0207702_10037526 Ga0207702_100375262 655
332 3300026116 Ga0207674_10017016 Ga0207674_100170166 655
333 3300027666 Ga0209282_1000139 Ga0209282_100013940 655
334 3300028794 Ga0307515_10000322 Ga0307515_1000032236 655
335 3300030733 Ga0314311_1017790 Ga0314311_10177902 655
336 3300030736 Ga0316180_1035995 Ga0316180_10359952 655
337 3300030742 Ga0316183_1000702 Ga0316183_10007026 655
338 3300031251 Ga0265327_10002224 Ga0265327_1000222421 655
339 3300031251 Ga0265327_10014179 Ga0265327_100141793 655
340 3300031548 Ga0307408_100050258 Ga0307408_1000502583 655
341 3300031548 Ga0307408_100120379 Ga0307408_1001203791 655
342 3300031911 Ga0307412_10011873 Ga0307412_100118734 655
343 3300031911 Ga0307412_10025267 Ga0307412_100252672 655
344 3300032002 Ga0307416_100036501 Ga0307416_1000365013 655
345 3300041404 Ga0439436_0002764 Ga0439436_0002764_1652_3622 655
346 3300042004 Ga0439445_0001304 Ga0439445_0001304_3129_5096 655
347 3300042007 Ga0439449_0001783 Ga0439449_0001783_249_2219 655
348 3300042007 Ga0439449_0007227 Ga0439449_0007227_2137_4107 655
349 3300042010 Ga0439452_006961 Ga0439452_006961_813_2783 655
350 3300042015 Ga0439462_0001360 Ga0439462_0001360_1943_3913 655
351 3300042145 Ga0450906_004904 Ga0450906_004904_488_2455 655
352 3300042184 Ga0450908_001052 Ga0450908_001052_2216_4183 655
353 3300042531 Ga0450918_000544 Ga0450918_000544_3894_5861 655
354 3300046453 Ga0495627_006231 Ga0495627_006231_860_2830 655
355 3300046460 Ga0495638_0009609 Ga0495638_0009609_99_2069 655
356 3300046518 Ga0495631_0000101 Ga0495631_0000101_30409_32379 655
357 3300046615 Ga0495656_0001081 Ga0495656_0001081_3869_5839 655
358 3300046616 Ga0495668_0029635 Ga0495668_0029635_860_2830 655
359 3300046660 Ga0495625_0000136 Ga0495625_0000136_97813_99780 655
360 3300046660 Ga0495625_0014946 Ga0495625_0014946_2406_4376 655
361 3300046660 Ga0495625_0047354 Ga0495625_0047354_448_2415 655
362 3300046692 Ga0495671_0007080 Ga0495671_0007080_4190_6157 655
363 3300048904 Ga0496101_0055471 Ga0496101_0055471_517_2493 655
364 3300048905 Ga0496102_0007175 Ga0496102_0007175_5378_7354 655
365 3300048912 Ga0496109_0043408 Ga0496109_0043408_30_2006 655
366 3300048912 Ga0496109_0055082 Ga0496109_0055082_490_2589 655
367 3300048914 Ga0496111_0071879 Ga0496111_0071879_461_2491 655
368 3300048919 Ga0496116_0027074 Ga0496116_0027074_1466_3436 655
369 3300048921 Ga0496118_0023617 Ga0496118_0023617_2677_4647 655
370 3300048921 Ga0496118_0026855 Ga0496118_0026855_879_2849 655
371 3300048925 Ga0496122_0001604 Ga0496122_0001604_31112_33085 655
372 3300048926 Ga0496123_0000329 Ga0496123_0000329_47666_49639 655
373 3300048927 Ga0496124_0019190 Ga0496124_0019190_1892_3865 655
374 3300048928 Ga0496125_0078151 Ga0496125_0078151_170_2140 655
375 3300049759 Ga0501262_000115 Ga0501262_000115_5595_7562 655
376 3300050493 nmdc:mga0k408_15361_c1 nmdc:mga0k408_15361_c1_320_2287 655
377 3300050496 nmdc:mga07m45_18301_c1 nmdc:mga07m45_18301_c1_1062_3032 655
378 3300053093 Ga0500651_0000136 Ga0500651_0000136_8944_10914 655
379 3300053110 Ga0500571_000102 Ga0500571_000102_13152_15122 655
380 3300053134 Ga0500658_0000168 Ga0500658_0000168_3875_5845 655
381 3300053134 Ga0500658_0000433 Ga0500658_0000433_13862_15832 655
382 3300053136 Ga0500559_0008213 Ga0500559_0008213_2091_4064 655
383 3300053139 Ga0500568_0002066 Ga0500568_0002066_5196_7166 655
384 3300053153 Ga0500616_0014180 Ga0500616_0014180_661_2631 655
385 3300053158 Ga0500627_0000763 Ga0500627_0000763_6247_8214 655

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

267

607

0.94

PF03717

PBP_dimer

Penicillin-binding Protein dimerisation domain

56

236

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6tix-assembly1.cif.gz_AAA crystal structure of penicillin-binding protein 2 from yersinia pestis in complex with mecillinam 0.9056 59 613
7kis-assembly2.cif.gz_B crystal structure of pseudomonas aeruginosa pbp2 in complex with wck 5153 0.9053 60 614
6tix-assembly1.cif.gz_AAA crystal structure of penicillin-binding protein 2 from yersinia pestis in complex with mecillinam 0.9004 59 613
6tix-assembly2.cif.gz_BBB crystal structure of penicillin-binding protein 2 from yersinia pestis in complex with mecillinam 0.8997 55 612
6xv5-assembly2.cif.gz_AAA crystal structure of penicillin-binding protein 2 from yersinia pestis in complex with ertapenem 0.8976 55 613
ID Description Score Start End Superfamily
af_P0AD65_248_620_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9312 249 613 3.40.710.10
af_P0AD65_248_620_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.907 249 613 3.40.710.10
3ue3A03 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8972 319 524 3.40.710.10
3ue3A03 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8833 319 524 3.40.710.10
4bjpA03 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8731 319 524 3.40.710.10
ID Description Score Start End GO Terms
AF-X0Y5R2-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9525 265 468 GO:0005886
GO:0008360
GO:0008658
GO:0009252
GO:0071555
GO:0071972
AF-A0A381WXU1-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9477 212 613 GO:0005886
GO:0008360
GO:0008658
GO:0009002
GO:0009252
GO:0071555
GO:0071972
AF-A0A7C9P8L1-F1-model_v4 Penicillin-binding protein 2 0.9409 424 618 GO:0005886
GO:0008360
GO:0008658
GO:0009252
GO:0071555
GO:0071972
AF-A0A2D8BA13-F1-model_v4 Penicillin-binding protein 2 0.9388 287 613 GO:0005886
GO:0008360
GO:0008658
GO:0009252
GO:0071555
GO:0071972
AF-A0A812A8R1-F1-model_v4 deleted 0.9304 201 376

Feature Viewer

pLDDT pTM Quality
85.9 0.82 High
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Predicted Structure (AlphaFold2)

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