F430109

General Info

Members Datasets Scaffolds Average Seq Length
385 183 770 360

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100031376|Ga0068869_1000313762
Length 390
Sequence MFSNWFLKSFRILLLPFSIIYWLTVWIRNFFYDTKILRSSSFGLPIICVGNLSVGGTGKSPMVEFLIGHLKDKFKPATLSRGYKRKTTGYVLANEHTTSLDIGDEPMLFHQKFPGVPVAVGEERLVAIPQLLHDRPGTQVIVLDDAFQHRAVNAGLNILLTDCGNLFTRDFYLPTGDLRDLKSGYKRADIIVVTKCKFEMTGEEADKIRNEIQPSSKQQLYFSSIQYGNPYHIINHTPFELDQDTEVLLVTGIASPQPLKKLLEEKCRTYQLMSFRDHYIFRIDDLRDIRRRFDRVEAQKKIILTTEKDAMRLMKFRNELERLPVYVIPISHHFLFEQEMQFIDAVTKFIKEFKPSGMKESGAGLPEAQVPARTERVRSGGSDTIPPGRD

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
119 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
127 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
128 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
129 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
141 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
156 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
157 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
158 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
159 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
160 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
161 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
162 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
163 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
164 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
165 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
166 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
167 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
168 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
169 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
171 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
178 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
181 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
182 2818991444 Filimonas endophytica 3197 Isolate Unclassified
183 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0
Isolates 0.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.08
Nodule 0
Rhizoplane 0.52
Rhizosphere 95.58
Stem 0
Stem Tuber 0
Unclassified 11.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100031376 3300005334 Bacteria 3738
2 MRS1b_contig_5012334 2162886011 Unclassified 2075
3 JGI24740J21852_10027848 3300001979 Bacteria 1875
4 JGI24751J29686_10000670 3300002459 Bacteria 8551
5 JGI25406J46586_10000644 3300003203 Bacteria 16307
6 rootL2_10100903 3300003322 Bacteria 4681
7 JGI25160J50197_1001682 3300003354 Bacteria 10776
8 Ga0065712_10002603 3300005290 Bacteria 6674
9 Ga0065707_10133654 3300005295 Unclassified 1878
10 Ga0070683_100012898 3300005329 Bacteria 7273
11 Ga0070683_100025338 3300005329 Bacteria 5326
12 Ga0070670_100056696 3300005331 Bacteria 3363
13 Ga0070670_100065046 3300005331 Bacteria 3129
14 Ga0070670_100108980 3300005331 Bacteria 2386
15 Ga0070670_100161966 3300005331 Bacteria 1939
16 Ga0070670_100247264 3300005331 Bacteria 1553
17 Ga0070677_10015941 3300005333 Bacteria 2669
18 Ga0068869_100007449 3300005334 Bacteria 6996
19 Ga0068869_100031458 3300005334 Bacteria 3733
20 Ga0068869_100043186 3300005334 Unclassified 3237
21 Ga0068869_100341356 3300005334 Bacteria 1219
22 Ga0070666_10011914 3300005335 Bacteria 5470
23 Ga0070682_100045120 3300005337 Bacteria 2731
24 Ga0068868_100002169 3300005338 Bacteria 13537
25 Ga0070660_100127769 3300005339 Bacteria 2032
26 Ga0070661_100014452 3300005344 Bacteria 5563
27 Ga0070668_100013911 3300005347 Bacteria 6017
28 Ga0070668_100016633 3300005347 Bacteria 5498
29 Ga0070669_100018600 3300005353 Bacteria 4966
30 Ga0070675_100021923 3300005354 Bacteria 5104
31 Ga0070675_100046351 3300005354 Bacteria 3559
32 Ga0070675_100106120 3300005354 Bacteria 2371
33 Ga0070675_100112986 3300005354 Bacteria 2300
34 Ga0070675_100199112 3300005354 Bacteria 1738
35 Ga0070673_100003474 3300005364 Bacteria 9812
36 Ga0070673_100013780 3300005364 Bacteria 5608
37 Ga0070673_100042493 3300005364 Bacteria 3505
38 Ga0070673_100052496 3300005364 Bacteria 3198
39 Ga0070688_100004110 3300005365 Bacteria 7554
40 Ga0070688_100013681 3300005365 Bacteria 4582
41 Ga0070688_100106263 3300005365 Bacteria 1859
42 Ga0070688_100240139 3300005365 Bacteria 1285
43 Ga0070659_100014346 3300005366 Bacteria 5921
44 Ga0070667_100061020 3300005367 Bacteria 3192
45 Ga0070667_100066540 3300005367 Bacteria 3062
46 Ga0070662_100002745 3300005457 Bacteria 10880
47 Ga0070662_100035839 3300005457 Bacteria 3506
48 Ga0070662_100099052 3300005457 Bacteria 2203
49 Ga0068867_100017599 3300005459 Bacteria 5075
50 Ga0068867_100038580 3300005459 Unclassified 3478
51 Ga0068867_100077090 3300005459 Bacteria 2504
52 Ga0068867_100091625 3300005459 Bacteria 2308
53 Ga0068867_100103807 3300005459 Bacteria 2174
54 Ga0070685_10019539 3300005466 Bacteria 3657
55 Ga0070698_100002611 3300005471 Bacteria 19856
56 Ga0070698_100008358 3300005471 Bacteria 11187
57 Ga0070684_100001466 3300005535 Bacteria 17035
58 Ga0070684_100028684 3300005535 Bacteria 4708
59 Ga0070684_100211455 3300005535 Bacteria 1768
60 Ga0070697_100174168 3300005536 Bacteria 1822
61 Ga0068853_100054908 3300005539 Bacteria 3433
62 Ga0068853_100116066 3300005539 Bacteria 2383
63 Ga0068853_100121392 3300005539 Bacteria 2331
64 Ga0070672_100062518 3300005543 Bacteria 2938
65 Ga0070672_100097157 3300005543 Bacteria 2384
66 Ga0070672_100123771 3300005543 Bacteria 2119
67 Ga0070672_100277614 3300005543 Bacteria 1416
68 Ga0070686_100107351 3300005544 Bacteria 1896
69 Ga0068855_100183493 3300005563 Bacteria 2365
70 Ga0070664_100018624 3300005564 Bacteria 5708
71 Ga0070664_100040819 3300005564 Bacteria 3914
72 Ga0070664_100064867 3300005564 Bacteria 3115
73 Ga0070664_100115122 3300005564 Unclassified 2350
74 Ga0070664_100118496 3300005564 Bacteria 2316
75 Ga0070664_100198882 3300005564 Bacteria 1788
76 Ga0070664_100388588 3300005564 Bacteria 1275
77 Ga0068857_100030762 3300005577 Bacteria 4742
78 Ga0068857_100050145 3300005577 Bacteria 3703
79 Ga0068857_100102831 3300005577 Bacteria 2565
80 Ga0068857_100240306 3300005577 Unclassified 1658
81 Ga0068857_100247935 3300005577 Bacteria 1632
82 Ga0068852_100002173 3300005616 Bacteria 13438
83 Ga0068852_100056904 3300005616 Bacteria 3382
84 Ga0068852_100245108 3300005616 Bacteria 1714
85 Ga0068852_100525693 3300005616 Bacteria 1181
86 Ga0068859_100076011 3300005617 Unclassified 3399
87 Ga0068859_100162620 3300005617 Bacteria 2311
88 Ga0068859_100272435 3300005617 Bacteria 1785
89 Ga0068864_100003839 3300005618 Bacteria 12389
90 Ga0068864_100006025 3300005618 Bacteria 9953
91 Ga0068864_100016140 3300005618 Bacteria 6214
92 Ga0068864_100131420 3300005618 Bacteria 2249
93 Ga0068864_100268096 3300005618 Unclassified 1590
94 Ga0068861_100023860 3300005719 Bacteria 4417
95 Ga0068861_100130333 3300005719 Bacteria 2040
96 Ga0068861_100193569 3300005719 Bacteria 1702
97 Ga0068861_100247065 3300005719 Unclassified 1521
98 Ga0068858_100018630 3300005842 Bacteria 6499
99 Ga0068860_100070342 3300005843 Bacteria 3327
100 Ga0068860_100161582 3300005843 Unclassified 2160
101 Ga0068860_100225124 3300005843 Bacteria 1822
102 Ga0068860_100469236 3300005843 Unclassified 1253
103 Ga0068862_100043653 3300005844 Bacteria 3823
104 Ga0068862_100208795 3300005844 Bacteria 1764
105 Ga0068862_100228462 3300005844 Unclassified 1687
106 Ga0081539_10000641 3300005985 Bacteria 70679
107 Ga0081539_10007728 3300005985 Bacteria 9641
108 Ga0075366_10013047 3300006195 Bacteria 4725
109 Ga0097621_100029321 3300006237 Bacteria 4345
110 Ga0097621_100052198 3300006237 Bacteria 3330
111 Ga0068871_100016177 3300006358 Bacteria 5608
112 Ga0068871_100274937 3300006358 Bacteria 1472
113 Ga0075428_100020415 3300006844 Bacteria 7333
114 Ga0075428_100077093 3300006844 Bacteria 3639
115 Ga0075428_100340350 3300006844 Unclassified 1611
116 Ga0075430_100035476 3300006846 Bacteria 4231
117 Ga0075430_100209292 3300006846 Bacteria 1618
118 Ga0075431_100070190 3300006847 Bacteria 3614
119 Ga0075431_100221505 3300006847 Unclassified 1930
120 Ga0075434_100109014 3300006871 Bacteria 2779
121 Ga0075429_100007106 3300006880 Bacteria 9721
122 Ga0075429_100104451 3300006880 Bacteria 2474
123 Ga0068865_100162427 3300006881 Bacteria 1705
124 Ga0097620_100076011 3300006931 Unclassified 3399
125 Ga0097620_100162620 3300006931 Bacteria 2311
126 Ga0097620_100272431 3300006931 Bacteria 1785
127 Ga0097620_100360194 3300006931 Bacteria 1549
128 Ga0097620_100374587 3300006931 Bacteria 1519
129 Ga0111539_10005334 3300009094 Bacteria 16629
130 Ga0111539_10151447 3300009094 Bacteria 2715
131 Ga0111539_10283200 3300009094 Bacteria 1929
132 Ga0105247_10002918 3300009101 Bacteria 11374
133 Ga0105243_10159079 3300009148 Bacteria 1946
134 Ga0105241_10082137 3300009174 Unclassified 2525
135 Ga0105242_10032592 3300009176 Unclassified 4167
136 Ga0105237_10007550 3300009545 Bacteria 11883
137 Ga0105237_10007627 3300009545 Bacteria 11822
138 Ga0105249_10001965 3300009553 Bacteria 17835
139 Ga0105249_10002979 3300009553 Bacteria 14608
140 Ga0105249_10010476 3300009553 Bacteria 8146
141 Ga0105249_10012416 3300009553 Bacteria 7509
142 Ga0105249_10035849 3300009553 Bacteria 4498
143 Ga0105249_10075355 3300009553 Bacteria 3125
144 Ga0105239_10029965 3300010375 Bacteria 5985
145 Ga0105239_10037800 3300010375 Bacteria 5290
146 Ga0105239_10458107 3300010375 Bacteria 1447
147 Ga0157370_10034265 3300013104 Bacteria 4947
148 Ga0157369_10068652 3300013105 Bacteria 3808
149 Ga0157374_10001792 3300013296 Bacteria 18071
150 Ga0157374_10002989 3300013296 Bacteria 14152
151 Ga0157374_10048251 3300013296 Bacteria 3951
152 Ga0157374_10070999 3300013296 Bacteria 3282
153 Ga0157378_10007694 3300013297 Bacteria 9399
154 Ga0157378_10011944 3300013297 Bacteria 7603
155 Ga0157378_10083171 3300013297 Bacteria 2896
156 Ga0157378_10133058 3300013297 Bacteria 2304
157 Ga0163162_10007176 3300013306 Bacteria 10819
158 Ga0163162_10012486 3300013306 Bacteria 8298
159 Ga0163162_10059293 3300013306 Bacteria 3859
160 Ga0163162_10166320 3300013306 Bacteria 2329
161 Ga0163162_10166899 3300013306 Bacteria 2325
162 Ga0163162_10523189 3300013306 Unclassified 1315
163 Ga0157372_10034236 3300013307 Bacteria 5584
164 Ga0157372_10101484 3300013307 Bacteria 3285
165 Ga0157372_10170971 3300013307 Bacteria 2514
166 Ga0157372_10248971 3300013307 Bacteria 2062
167 Ga0157372_10306613 3300013307 Bacteria 1847
168 Ga0157375_10029071 3300013308 Bacteria 5193
169 Ga0157375_10037039 3300013308 Bacteria 4670
170 Ga0157375_10046061 3300013308 Bacteria 4249
171 Ga0157375_10094924 3300013308 Bacteria 3052
172 Ga0157375_10137611 3300013308 Unclassified 2567
173 Ga0163163_10000982 3300014325 Bacteria 24199
174 Ga0163163_10004922 3300014325 Bacteria 11488
175 Ga0163163_10009032 3300014325 Bacteria 8881
176 Ga0163163_10027214 3300014325 Bacteria 5475
177 Ga0163163_10058527 3300014325 Bacteria 3811
178 Ga0163163_10235868 3300014325 Bacteria 1879
179 Ga0157380_10002635 3300014326 Bacteria 12151
180 Ga0157380_10005287 3300014326 Bacteria 9029
181 Ga0157380_10059734 3300014326 Bacteria 3044
182 Ga0157380_10405361 3300014326 Bacteria 1295
183 Ga0157377_10002833 3300014745 Bacteria 7742
184 Ga0157379_10216745 3300014968 Bacteria 1734
185 Ga0157379_10269648 3300014968 Unclassified 1548
186 Ga0157376_10171578 3300014969 Bacteria 1976
187 Ga0157376_10379221 3300014969 Unclassified 1362
188 Ga0163161_10012175 3300017792 Bacteria 5966
189 Ga0163161_10014865 3300017792 Bacteria 5424
190 Ga0163161_10068427 3300017792 Bacteria 2594
191 Ga0163161_10119158 3300017792 Unclassified 1982
192 Ga0163161_10343365 3300017792 Bacteria 1185
193 Ga0213876_10041819 3300021384 Bacteria 2421
194 Ga0207426_1000023 3300025302 Bacteria 545465
195 Ga0207697_10078304 3300025315 Unclassified 1391
196 Ga0207710_10005959 3300025900 Bacteria 5227
197 Ga0207688_10005217 3300025901 Bacteria 7061
198 Ga0207680_10025497 3300025903 Bacteria 3261
199 Ga0207680_10033458 3300025903 Bacteria 2933
200 Ga0207647_10000057 3300025904 Bacteria 85211
201 Ga0207647_10016638 3300025904 Bacteria 5016
202 Ga0207685_10002475 3300025905 Bacteria 4246
203 Ga0207645_10001094 3300025907 Bacteria 22378
204 Ga0207645_10011957 3300025907 Bacteria 5905
205 Ga0207645_10068362 3300025907 Bacteria 2272
206 Ga0207643_10022830 3300025908 Bacteria 3447
207 Ga0207671_10006650 3300025914 Bacteria 10247
208 Ga0207671_10023950 3300025914 Bacteria 4596
209 Ga0207649_10015927 3300025920 Bacteria 4230
210 Ga0207649_10040582 3300025920 Bacteria 2829
211 Ga0207681_10012879 3300025923 Bacteria 5171
212 Ga0207681_10080232 3300025923 Bacteria 2301
213 Ga0207681_10223544 3300025923 Bacteria 1458
214 Ga0207650_10001510 3300025925 Bacteria 16628
215 Ga0207650_10013056 3300025925 Bacteria 5747
216 Ga0207650_10025329 3300025925 Bacteria 4226
217 Ga0207650_10047832 3300025925 Bacteria 3153
218 Ga0207650_10194340 3300025925 Unclassified 1623
219 Ga0207659_10009233 3300025926 Bacteria 6158
220 Ga0207659_10047153 3300025926 Bacteria 3047
221 Ga0207659_10061629 3300025926 Unclassified 2704
222 Ga0207659_10073147 3300025926 Bacteria 2509
223 Ga0207659_10077648 3300025926 Bacteria 2445
224 Ga0207644_10052013 3300025931 Bacteria 2943
225 Ga0207644_10116359 3300025931 Bacteria 2029
226 Ga0207644_10125347 3300025931 Bacteria 1960
227 Ga0207706_10007765 3300025933 Bacteria 9902
228 Ga0207706_10040361 3300025933 Bacteria 4136
229 Ga0207706_10089276 3300025933 Bacteria 2710
230 Ga0207706_10272197 3300025933 Bacteria 1478
231 Ga0207686_10000956 3300025934 Bacteria 17240
232 Ga0207686_10026228 3300025934 Bacteria 3399
233 Ga0207686_10112854 3300025934 Unclassified 1836
234 Ga0207670_10007259 3300025936 Bacteria 6174
235 Ga0207670_10054419 3300025936 Bacteria 2700
236 Ga0207704_10164175 3300025938 Bacteria 1584
237 Ga0207691_10022742 3300025940 Bacteria 5910
238 Ga0207691_10064722 3300025940 Bacteria 3311
239 Ga0207689_10001172 3300025942 Bacteria 25240
240 Ga0207689_10007661 3300025942 Bacteria 9455
241 Ga0207689_10014455 3300025942 Bacteria 6714
242 Ga0207689_10027951 3300025942 Bacteria 4719
243 Ga0207689_10088224 3300025942 Unclassified 2548
244 Ga0207689_10109405 3300025942 Unclassified 2271
245 Ga0207689_10171161 3300025942 Bacteria 1790
246 Ga0207661_10039306 3300025944 Bacteria 3713
247 Ga0207661_10122425 3300025944 Bacteria 2216
248 Ga0207679_10009123 3300025945 Bacteria 6341
249 Ga0207679_10125095 3300025945 Bacteria 2053
250 Ga0207651_10017162 3300025960 Bacteria 4268
251 Ga0207651_10071355 3300025960 Unclassified 2461
252 Ga0207651_10073778 3300025960 Unclassified 2427
253 Ga0207651_10111217 3300025960 Unclassified 2057
254 Ga0207651_10298565 3300025960 Bacteria 1338
255 Ga0207712_10002195 3300025961 Bacteria 12716
256 Ga0207712_10005316 3300025961 Bacteria 8132
257 Ga0207712_10039740 3300025961 Bacteria 3225
258 Ga0207712_10072850 3300025961 Bacteria 2475
259 Ga0207640_10100841 3300025981 Bacteria 2024
260 Ga0207658_10103318 3300025986 Bacteria 2237
261 Ga0207677_10046646 3300026023 Bacteria 2903
262 Ga0207639_10049168 3300026041 Unclassified 3196
263 Ga0207639_10110160 3300026041 Bacteria 2242
264 Ga0207678_10135378 3300026067 Bacteria 2102
265 Ga0207708_10128878 3300026075 Bacteria 1976
266 Ga0207641_10005870 3300026088 Bacteria 10418
267 Ga0207641_10017176 3300026088 Bacteria 5919
268 Ga0207648_10001367 3300026089 Bacteria 26953
269 Ga0207648_10002631 3300026089 Bacteria 19216
270 Ga0207648_10009027 3300026089 Bacteria 9588
271 Ga0207648_10057949 3300026089 Bacteria 3379
272 Ga0207648_10160175 3300026089 Bacteria 1987
273 Ga0207676_10009281 3300026095 Bacteria 6998
274 Ga0207676_10022760 3300026095 Bacteria 4613
275 Ga0207676_10138963 3300026095 Bacteria 2077
276 Ga0207674_10001383 3300026116 Bacteria 31265
277 Ga0207674_10026453 3300026116 Bacteria 6161
278 Ga0207674_10088077 3300026116 Bacteria 3098
279 Ga0207674_10220941 3300026116 Bacteria 1843
280 Ga0207675_100044565 3300026118 Bacteria 4146
281 Ga0207675_100050675 3300026118 Bacteria 3874
282 Ga0207675_100153052 3300026118 Bacteria 2196
283 Ga0207683_10021873 3300026121 Bacteria 5484
284 Ga0207698_10049810 3300026142 Bacteria 3191
285 Ga0207698_10114922 3300026142 Bacteria 2265
286 Ga0207698_10451602 3300026142 Bacteria 1241
287 Ga0268266_10164514 3300028379 Bacteria 2009
288 Ga0268265_10060283 3300028380 Bacteria 2908
289 Ga0268265_10173158 3300028380 Bacteria 1847
290 Ga0268265_10297751 3300028380 Bacteria 1451
291 Ga0268264_10049468 3300028381 Bacteria 3497
292 Ga0268264_10201204 3300028381 Unclassified 1822
293 Ga0265327_10000368 3300031251 Bacteria 85604
294 Ga0265327_10043351 3300031251 Bacteria 2408
295 Ga0307411_10032271 3300032005 Bacteria 3234
296 Ga0307415_100055379 3300032126 Bacteria 2713
297 Ga0373955_0075357 3300035172 Bacteria 1896
298 Ga0373933_0017341 3300035724 Bacteria 4040
299 Ga0373937_0012130 3300036401 Bacteria 7564
300 Ga0395905_0036185 3300037471 Bacteria 4636
301 Ga0436365_0313492 3300039437 Bacteria 30833
302 Ga0436365_0555131 3300039437 Unclassified 2614
303 Ga0436365_0881017 3300039437 Bacteria 14010
304 Ga0439461_0022824 3300041410 Bacteria 1256
305 Ga0439441_028067 3300042001 Bacteria 1077
306 Ga0439449_0002303 3300042007 Bacteria 7477
307 Ga0450894_004605 3300042131 Bacteria 1789
308 Ga0466972_0000022 3300044658 Bacteria 193802
309 Ga0453684_0094845 3300044712 Bacteria 3669
310 Ga0466970_0021611 3300044765 Unclassified 3352
311 Ga0466967_0080931 3300045976 Bacteria 2933
312 Ga0495653_0090320 3300046463 Bacteria 2242
313 Ga0495650_0025235 3300046471 Bacteria 2791
314 Ga0495618_0048412 3300046514 Bacteria 2683
315 Ga0495628_0033660 3300046516 Bacteria 4128
316 Ga0495630_0023630 3300046517 Bacteria 4544
317 Ga0495635_0054608 3300046663 Bacteria 2752
318 Ga0495669_0132923 3300046684 Bacteria 1172
319 Ga0495600_0030783 3300046809 Bacteria 3476
320 Ga0496110_0061085 3300048913 Bacteria 3325
321 Ga0496110_0068418 3300048913 Bacteria 3143
322 Ga0501031_0007370 3300049568 Bacteria 7171
323 Ga0501032_0150391 3300049569 Unclassified 1531
324 Ga0501034_0017489 3300049571 Bacteria 7353
325 Ga0501034_0020069 3300049571 Bacteria 6824
326 Ga0501034_0447086 3300049571 Unclassified 1210
327 Ga0501036_0051094 3300049572 Bacteria 3500
328 Ga0501037_0029858 3300049573 Unclassified 4028
329 Ga0501037_0098080 3300049573 Bacteria 2117
330 Ga0501038_0056728 3300049574 Bacteria 3364
331 Ga0501038_0150427 3300049574 Bacteria 1898
332 Ga0501038_0310010 3300049574 Unclassified 1237
333 Ga0501039_0070936 3300049575 Bacteria 2706
334 Ga0501043_0006278 3300049579 Bacteria 9541
335 Ga0501043_0028468 3300049579 Bacteria 4386
336 Ga0501046_0008687 3300049580 Bacteria 8830
337 Ga0501046_0010889 3300049580 Bacteria 7793
338 Ga0501047_0007240 3300049581 Bacteria 10430
339 Ga0501072_0166297 3300049588 Unclassified 1760
340 Ga0501072_0178033 3300049588 Unclassified 1696
341 Ga0501074_0002158 3300049590 Bacteria 13623
342 Ga0501198_000546 3300049649 Bacteria 4678
343 Ga0501202_000151 3300049652 Bacteria 8308
344 Ga0501202_002679 3300049652 Bacteria 3005
345 Ga0501202_006426 3300049652 Bacteria 2104
346 Ga0501227_014210 3300049665 Bacteria 1765
347 Ga0501233_008623 3300049668 Bacteria 1969
348 Ga0501235_006408 3300049669 Bacteria 2563
349 Ga0501243_006062 3300049675 Bacteria 1829
350 Ga0501257_001852 3300049686 Bacteria 4404
351 Ga0501257_013743 3300049686 Unclassified 1858
352 Ga0501259_001742 3300049688 Bacteria 3603
353 Ga0501259_009514 3300049688 Bacteria 1579
354 Ga0501221_000190 3300049704 Bacteria 8567
355 Ga0501225_0011729 3300049705 Bacteria 2464
356 Ga0501245_002059 3300049708 Bacteria 2666
357 Ga0501245_006451 3300049708 Bacteria 1641
358 Ga0501083_0009095 3300049744 Bacteria 7016
359 Ga0501266_000575 3300049763 Bacteria 4864
360 Ga0501282_003596 3300049778 Bacteria 1671
361 Ga0501035_0017343 3300049822 Bacteria 6639
362 Ga0501035_0022601 3300049822 Bacteria 5777
363 Ga0501035_0078068 3300049822 Bacteria 2926
364 Ga0501035_0130627 3300049822 Unclassified 2190
365 Ga0501044_0025047 3300049823 Bacteria 6327
366 Ga0501044_0049149 3300049823 Bacteria 4354
367 Ga0501044_0341816 3300049823 Bacteria 1417
368 nmdc:mga0k408_110991_c1 3300050493 Bacteria 1621
369 nmdc:mga05p37_236936_c1 3300050507 Bacteria 2196
370 nmdc:mga05p37_308350_c1 3300050507 Bacteria 1877
371 nmdc:mga09592_116354_c1 3300050508 Bacteria 2294
372 nmdc:mga09592_334741_c1 3300050508 Bacteria 1311
373 nmdc:mga09592_44078_c1 3300050508 Bacteria 3754
374 nmdc:mga0qj67_251063_c1 3300050509 Bacteria 1435
375 nmdc:mga06r32_160396_c1 3300050510 Bacteria 2231
376 nmdc:mga06r32_223123_c1 3300050510 Bacteria 1873
377 nmdc:mga06r32_301877_c1 3300050510 Unclassified 1587
378 nmdc:mga0n895_357837_c1 3300050512 Bacteria 1478
379 Ga0495619_0038373 3300053085 Bacteria 3125
380 Ga0500562_000020 3300053108 Bacteria 113686
381 Ga0500568_0001662 3300053139 Bacteria 13941
382 Ga0500622_0000467 3300053156 Bacteria 38187
383 Ga0500611_000188 3300053727 Bacteria 8325
384 2819588330 2818991444 Bacteria 6968812
385 2929156461 2929154850 Bacteria 6753285
386 Ga0068869_100031376
387 MRS1b_contig_5012334
388 JGI24740J21852_10027848
389 JGI24751J29686_10000670
390 JGI25406J46586_10000644
391 rootL2_10100903
392 JGI25160J50197_1001682
393 Ga0065712_10002603
394 Ga0065707_10133654
395 Ga0070683_100012898
396 Ga0070683_100025338
397 Ga0070670_100056696
398 Ga0070670_100065046
399 Ga0070670_100108980
400 Ga0070670_100161966
401 Ga0070670_100247264
402 Ga0070677_10015941
403 Ga0068869_100007449
404 Ga0068869_100031458
405 Ga0068869_100043186
406 Ga0068869_100341356
407 Ga0070666_10011914
408 Ga0070682_100045120
409 Ga0068868_100002169
410 Ga0070660_100127769
411 Ga0070661_100014452
412 Ga0070668_100013911
413 Ga0070668_100016633
414 Ga0070669_100018600
415 Ga0070675_100021923
416 Ga0070675_100046351
417 Ga0070675_100106120
418 Ga0070675_100112986
419 Ga0070675_100199112
420 Ga0070673_100003474
421 Ga0070673_100013780
422 Ga0070673_100042493
423 Ga0070673_100052496
424 Ga0070688_100004110
425 Ga0070688_100013681
426 Ga0070688_100106263
427 Ga0070688_100240139
428 Ga0070659_100014346
429 Ga0070667_100061020
430 Ga0070667_100066540
431 Ga0070662_100002745
432 Ga0070662_100035839
433 Ga0070662_100099052
434 Ga0068867_100017599
435 Ga0068867_100038580
436 Ga0068867_100077090
437 Ga0068867_100091625
438 Ga0068867_100103807
439 Ga0070685_10019539
440 Ga0070698_100002611
441 Ga0070698_100008358
442 Ga0070684_100001466
443 Ga0070684_100028684
444 Ga0070684_100211455
445 Ga0070697_100174168
446 Ga0068853_100054908
447 Ga0068853_100116066
448 Ga0068853_100121392
449 Ga0070672_100062518
450 Ga0070672_100097157
451 Ga0070672_100123771
452 Ga0070672_100277614
453 Ga0070686_100107351
454 Ga0068855_100183493
455 Ga0070664_100018624
456 Ga0070664_100040819
457 Ga0070664_100064867
458 Ga0070664_100115122
459 Ga0070664_100118496
460 Ga0070664_100198882
461 Ga0070664_100388588
462 Ga0068857_100030762
463 Ga0068857_100050145
464 Ga0068857_100102831
465 Ga0068857_100240306
466 Ga0068857_100247935
467 Ga0068852_100002173
468 Ga0068852_100056904
469 Ga0068852_100245108
470 Ga0068852_100525693
471 Ga0068859_100076011
472 Ga0068859_100162620
473 Ga0068859_100272435
474 Ga0068864_100003839
475 Ga0068864_100006025
476 Ga0068864_100016140
477 Ga0068864_100131420
478 Ga0068864_100268096
479 Ga0068861_100023860
480 Ga0068861_100130333
481 Ga0068861_100193569
482 Ga0068861_100247065
483 Ga0068858_100018630
484 Ga0068860_100070342
485 Ga0068860_100161582
486 Ga0068860_100225124
487 Ga0068860_100469236
488 Ga0068862_100043653
489 Ga0068862_100208795
490 Ga0068862_100228462
491 Ga0081539_10000641
492 Ga0081539_10007728
493 Ga0075366_10013047
494 Ga0097621_100029321
495 Ga0097621_100052198
496 Ga0068871_100016177
497 Ga0068871_100274937
498 Ga0075428_100020415
499 Ga0075428_100077093
500 Ga0075428_100340350
501 Ga0075430_100035476
502 Ga0075430_100209292
503 Ga0075431_100070190
504 Ga0075431_100221505
505 Ga0075434_100109014
506 Ga0075429_100007106
507 Ga0075429_100104451
508 Ga0068865_100162427
509 Ga0097620_100076011
510 Ga0097620_100162620
511 Ga0097620_100272431
512 Ga0097620_100360194
513 Ga0097620_100374587
514 Ga0111539_10005334
515 Ga0111539_10151447
516 Ga0111539_10283200
517 Ga0105247_10002918
518 Ga0105243_10159079
519 Ga0105241_10082137
520 Ga0105242_10032592
521 Ga0105237_10007550
522 Ga0105237_10007627
523 Ga0105249_10001965
524 Ga0105249_10002979
525 Ga0105249_10010476
526 Ga0105249_10012416
527 Ga0105249_10035849
528 Ga0105249_10075355
529 Ga0105239_10029965
530 Ga0105239_10037800
531 Ga0105239_10458107
532 Ga0157370_10034265
533 Ga0157369_10068652
534 Ga0157374_10001792
535 Ga0157374_10002989
536 Ga0157374_10048251
537 Ga0157374_10070999
538 Ga0157378_10007694
539 Ga0157378_10011944
540 Ga0157378_10083171
541 Ga0157378_10133058
542 Ga0163162_10007176
543 Ga0163162_10012486
544 Ga0163162_10059293
545 Ga0163162_10166320
546 Ga0163162_10166899
547 Ga0163162_10523189
548 Ga0157372_10034236
549 Ga0157372_10101484
550 Ga0157372_10170971
551 Ga0157372_10248971
552 Ga0157372_10306613
553 Ga0157375_10029071
554 Ga0157375_10037039
555 Ga0157375_10046061
556 Ga0157375_10094924
557 Ga0157375_10137611
558 Ga0163163_10000982
559 Ga0163163_10004922
560 Ga0163163_10009032
561 Ga0163163_10027214
562 Ga0163163_10058527
563 Ga0163163_10235868
564 Ga0157380_10002635
565 Ga0157380_10005287
566 Ga0157380_10059734
567 Ga0157380_10405361
568 Ga0157377_10002833
569 Ga0157379_10216745
570 Ga0157379_10269648
571 Ga0157376_10171578
572 Ga0157376_10379221
573 Ga0163161_10012175
574 Ga0163161_10014865
575 Ga0163161_10068427
576 Ga0163161_10119158
577 Ga0163161_10343365
578 Ga0213876_10041819
579 Ga0207426_1000023
580 Ga0207697_10078304
581 Ga0207710_10005959
582 Ga0207688_10005217
583 Ga0207680_10025497
584 Ga0207680_10033458
585 Ga0207647_10000057
586 Ga0207647_10016638
587 Ga0207685_10002475
588 Ga0207645_10001094
589 Ga0207645_10011957
590 Ga0207645_10068362
591 Ga0207643_10022830
592 Ga0207671_10006650
593 Ga0207671_10023950
594 Ga0207649_10015927
595 Ga0207649_10040582
596 Ga0207681_10012879
597 Ga0207681_10080232
598 Ga0207681_10223544
599 Ga0207650_10001510
600 Ga0207650_10013056
601 Ga0207650_10025329
602 Ga0207650_10047832
603 Ga0207650_10194340
604 Ga0207659_10009233
605 Ga0207659_10047153
606 Ga0207659_10061629
607 Ga0207659_10073147
608 Ga0207659_10077648
609 Ga0207644_10052013
610 Ga0207644_10116359
611 Ga0207644_10125347
612 Ga0207706_10007765
613 Ga0207706_10040361
614 Ga0207706_10089276
615 Ga0207706_10272197
616 Ga0207686_10000956
617 Ga0207686_10026228
618 Ga0207686_10112854
619 Ga0207670_10007259
620 Ga0207670_10054419
621 Ga0207704_10164175
622 Ga0207691_10022742
623 Ga0207691_10064722
624 Ga0207689_10001172
625 Ga0207689_10007661
626 Ga0207689_10014455
627 Ga0207689_10027951
628 Ga0207689_10088224
629 Ga0207689_10109405
630 Ga0207689_10171161
631 Ga0207661_10039306
632 Ga0207661_10122425
633 Ga0207679_10009123
634 Ga0207679_10125095
635 Ga0207651_10017162
636 Ga0207651_10071355
637 Ga0207651_10073778
638 Ga0207651_10111217
639 Ga0207651_10298565
640 Ga0207712_10002195
641 Ga0207712_10005316
642 Ga0207712_10039740
643 Ga0207712_10072850
644 Ga0207640_10100841
645 Ga0207658_10103318
646 Ga0207677_10046646
647 Ga0207639_10049168
648 Ga0207639_10110160
649 Ga0207678_10135378
650 Ga0207708_10128878
651 Ga0207641_10005870
652 Ga0207641_10017176
653 Ga0207648_10001367
654 Ga0207648_10002631
655 Ga0207648_10009027
656 Ga0207648_10057949
657 Ga0207648_10160175
658 Ga0207676_10009281
659 Ga0207676_10022760
660 Ga0207676_10138963
661 Ga0207674_10001383
662 Ga0207674_10026453
663 Ga0207674_10088077
664 Ga0207674_10220941
665 Ga0207675_100044565
666 Ga0207675_100050675
667 Ga0207675_100153052
668 Ga0207683_10021873
669 Ga0207698_10049810
670 Ga0207698_10114922
671 Ga0207698_10451602
672 Ga0268266_10164514
673 Ga0268265_10060283
674 Ga0268265_10173158
675 Ga0268265_10297751
676 Ga0268264_10049468
677 Ga0268264_10201204
678 Ga0265327_10000368
679 Ga0265327_10043351
680 Ga0307411_10032271
681 Ga0307415_100055379
682 Ga0373955_0075357
683 Ga0373933_0017341
684 Ga0373937_0012130
685 Ga0395905_0036185
686 Ga0436365_0313492
687 Ga0436365_0555131
688 Ga0436365_0881017
689 Ga0439461_0022824
690 Ga0439441_028067
691 Ga0439449_0002303
692 Ga0450894_004605
693 Ga0466972_0000022
694 Ga0453684_0094845
695 Ga0466970_0021611
696 Ga0466967_0080931
697 Ga0495653_0090320
698 Ga0495650_0025235
699 Ga0495618_0048412
700 Ga0495628_0033660
701 Ga0495630_0023630
702 Ga0495635_0054608
703 Ga0495669_0132923
704 Ga0495600_0030783
705 Ga0496110_0061085
706 Ga0496110_0068418
707 Ga0501031_0007370
708 Ga0501032_0150391
709 Ga0501034_0017489
710 Ga0501034_0020069
711 Ga0501034_0447086
712 Ga0501036_0051094
713 Ga0501037_0029858
714 Ga0501037_0098080
715 Ga0501038_0056728
716 Ga0501038_0150427
717 Ga0501038_0310010
718 Ga0501039_0070936
719 Ga0501043_0006278
720 Ga0501043_0028468
721 Ga0501046_0008687
722 Ga0501046_0010889
723 Ga0501047_0007240
724 Ga0501072_0166297
725 Ga0501072_0178033
726 Ga0501074_0002158
727 Ga0501198_000546
728 Ga0501202_000151
729 Ga0501202_002679
730 Ga0501202_006426
731 Ga0501227_014210
732 Ga0501233_008623
733 Ga0501235_006408
734 Ga0501243_006062
735 Ga0501257_001852
736 Ga0501257_013743
737 Ga0501259_001742
738 Ga0501259_009514
739 Ga0501221_000190
740 Ga0501225_0011729
741 Ga0501245_002059
742 Ga0501245_006451
743 Ga0501083_0009095
744 Ga0501266_000575
745 Ga0501282_003596
746 Ga0501035_0017343
747 Ga0501035_0022601
748 Ga0501035_0078068
749 Ga0501035_0130627
750 Ga0501044_0025047
751 Ga0501044_0049149
752 Ga0501044_0341816
753 nmdc:mga0k408_110991_c1
754 nmdc:mga05p37_236936_c1
755 nmdc:mga05p37_308350_c1
756 nmdc:mga09592_116354_c1
757 nmdc:mga09592_334741_c1
758 nmdc:mga09592_44078_c1
759 nmdc:mga0qj67_251063_c1
760 nmdc:mga06r32_160396_c1
761 nmdc:mga06r32_223123_c1
762 nmdc:mga06r32_301877_c1
763 nmdc:mga0n895_357837_c1
764 Ga0495619_0038373
765 Ga0500562_000020
766 Ga0500568_0001662
767 Ga0500622_0000467
768 Ga0500611_000188
769 2819588330
770 2929156461

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02606

LpxK

Tetraacyldisaccharide-1-P 4'-kinase

10

351

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4itm-assembly1.cif.gz_A "crystal structure of ""apo"" form lpxk from aquifex aeolicus in complex with atp at 2.2 angstrom resolution" 0.837 10 350
4itm-assembly1.cif.gz_A "crystal structure of ""apo"" form lpxk from aquifex aeolicus in complex with atp at 2.2 angstrom resolution" 0.8298 10 350
3f0h-assembly1.cif.gz_A-2 crystal structure of aminotransferase (rer070207000802) from eubacterium rectale at 1.70 a resolution 0.6987 240 306
2ch2-assembly2.cif.gz_C structure of the anopheles gambiae 3-hydroxykynurenine transaminase in complex with inhibitor 0.6806 241 306
1vjo-assembly1.cif.gz_A-2 crystal structure of alanine--glyoxylate aminotransferase (alr1004) from nostoc sp. at 1.70 a resolution 0.6393 241 306
ID Description Score Start End Superfamily
af_P27300_12_322_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8734 11 346 3.40.50.300
af_P27300_12_322_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8655 11 346 3.40.50.300
af_A0A0P0X1P5_1_135_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8039 76 222 3.40.50.300
af_I1KYA1_28_391_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7988 18 350 3.40.50.300
af_A0A0P0X1P5_1_135_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7826 76 222 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A4Q3W4D5-F1-model_v4 Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) 0.9753 7 351 GO:0005524
GO:0005886
GO:0009029
GO:0009244
GO:0009245
AF-A0A849USF7-F1-model_v4 Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) 0.9694 3 353 GO:0005524
GO:0005886
GO:0009029
GO:0009244
GO:0009245
AF-E5CGZ3-F1-model_v4 Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) 0.9689 14 351 GO:0005524
GO:0005886
GO:0009029
GO:0009244
GO:0009245
AF-A0A836XDU5-F1-model_v4 Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) 0.9669 11 353 GO:0005524
GO:0005886
GO:0009029
GO:0009244
GO:0009245
AF-A0A6F9ZHH0-F1-model_v4 Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) (Lipid A 4'-kinase) 0.9659 13 351 GO:0005524
GO:0005886
GO:0009029
GO:0009244
GO:0009245

Map