F429978

General Info

Members Datasets Scaffolds Average Seq Length
384 190 768 259

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0016504|Ga0466967_0016504_3958_4881
Length 307
Sequence LATASTVGTRVPDDPDPVVDIASHHARRTLPGRLIGELAGGMSSSDSPTSPRPLALVTGPTAGLGRVFADRLARRGYDLVLVARDEARLERLADELRRSYGVSCEVLAADLVDRDQLKAVEDRVSSTGSGGDRPVDLLVNNAGFGLKHTFLRNDVEQEQALLDVLVTAPMRLTHAALRQMTERHTGGILNVSSVAGTQPRGSYSAAKAYLNRLGEWAAHEYAKDGVHIMTLMPGFTRTEFHERMEVGRDAVPGPLWLDVDRVVDEALADWDAGKRVSVPSKRYKVIATASKHLPVGLLQRFQSLGRK

Samples

Sample ID Description Type Environment
1 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
92 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
93 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
94 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
95 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
98 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
104 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
105 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
106 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
107 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
108 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
109 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
123 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
124 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
125 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
156 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
162 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
163 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
166 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
167 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
172 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
173 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
174 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
175 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
179 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
180 2643221604 Nocardioides sp. Root190 Isolate Unclassified
181 2643221615 Nocardioides sp. Root224 Isolate Unclassified
182 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
183 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
184 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
185 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
186 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
187 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
188 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
189 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
190 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 96.88
Metatranscriptomes 0.26
Isolates 2.86

Biome Distribution

Category Percentage (%)
Aerial Root 0.52
Bulb 0
Endosphere 18.75
Nodule 0
Rhizoplane 16.67
Rhizosphere 60.94
Stem 0
Stem Tuber 0
Unclassified 2.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466967_0016504 3300045976 Bacteria 5826
2 MBSR1b_contig_762806 2162886012 Unclassified 1708
3 Ga0070658_10023034 3300005327 Bacteria 4999
4 Ga0070658_10092411 3300005327 Bacteria 2495
5 Ga0070683_100016392 3300005329 Bacteria 6535
6 Ga0070683_100077502 3300005329 Bacteria 3108
7 Ga0068869_100197022 3300005334 Bacteria 1587
8 Ga0070680_100282354 3300005336 Bacteria 1407
9 Ga0070682_100132294 3300005337 Bacteria 1690
10 Ga0068868_100117805 3300005338 Bacteria 2164
11 Ga0068868_100372669 3300005338 Bacteria 1227
12 Ga0070660_100055192 3300005339 Bacteria 3070
13 Ga0070661_100279284 3300005344 Bacteria 1295
14 Ga0070692_10055536 3300005345 Bacteria 2071
15 Ga0070674_100245870 3300005356 Bacteria 1403
16 Ga0070674_100453166 3300005356 Bacteria 1059
17 Ga0070659_100014661 3300005366 Bacteria 5861
18 Ga0070667_100034005 3300005367 Bacteria 4264
19 Ga0070667_100275671 3300005367 Bacteria 1509
20 Ga0070714_100355120 3300005435 Bacteria 1377
21 Ga0070701_10059187 3300005438 Bacteria 2013
22 Ga0070700_100266074 3300005441 Bacteria 1236
23 Ga0070694_100070741 3300005444 Bacteria 2403
24 Ga0070663_100374530 3300005455 Bacteria 1158
25 Ga0070678_100168971 3300005456 Bacteria 1779
26 Ga0070681_10056474 3300005458 Bacteria 3907
27 Ga0070685_10080268 3300005466 Bacteria 1954
28 Ga0070679_100004104 3300005530 Bacteria 13426
29 Ga0070684_100002154 3300005535 Bacteria 14537
30 Ga0070684_100119294 3300005535 Bacteria 2372
31 Ga0070684_100229695 3300005535 Bacteria 1694
32 Ga0070695_100034219 3300005545 Unclassified 3184
33 Ga0070704_100006334 3300005549 Bacteria 6972
34 Ga0068855_100076140 3300005563 Bacteria 3895
35 Ga0068855_100278838 3300005563 Bacteria 1857
36 Ga0068855_100938282 3300005563 Bacteria 912
37 Ga0068856_100118947 3300005614 Bacteria 2643
38 Ga0068852_100823383 3300005616 Bacteria 943
39 Ga0068864_100271190 3300005618 Bacteria 1581
40 Ga0068861_100387931 3300005719 Bacteria 1236
41 Ga0068858_100017195 3300005842 Bacteria 6786
42 Ga0068860_100000282 3300005843 Bacteria 72471
43 Ga0068860_100058167 3300005843 Bacteria 3675
44 Ga0068860_100858196 3300005843 Bacteria 923
45 Ga0081539_10026786 3300005985 Bacteria 3666
46 Ga0081539_10116663 3300005985 Bacteria 1333
47 Ga0075365_10004237 3300006038 Bacteria 7561
48 Ga0075365_10006080 3300006038 Bacteria 6594
49 Ga0075365_10018354 3300006038 Bacteria 4300
50 Ga0075365_10023961 3300006038 Bacteria 3845
51 Ga0075365_10030585 3300006038 Bacteria 3450
52 Ga0075365_10043192 3300006038 Bacteria 2951
53 Ga0075365_10044965 3300006038 Bacteria 2895
54 Ga0075365_10071810 3300006038 Bacteria 2330
55 Ga0075365_10102595 3300006038 Bacteria 1960
56 Ga0075365_10142221 3300006038 Bacteria 1666
57 Ga0075365_10206009 3300006038 Bacteria 1378
58 Ga0075365_10322185 3300006038 Bacteria 1088
59 Ga0075365_10363389 3300006038 Bacteria 1020
60 Ga0075368_10000780 3300006042 Bacteria 9794
61 Ga0075368_10041188 3300006042 Bacteria 1814
62 Ga0075363_100014307 3300006048 Bacteria 3872
63 Ga0075363_100041422 3300006048 Bacteria 2429
64 Ga0075363_100050060 3300006048 Bacteria 2226
65 Ga0075363_100063672 3300006048 Bacteria 1991
66 Ga0075363_100229424 3300006048 Bacteria 1066
67 Ga0075364_10040942 3300006051 Bacteria 3006
68 Ga0075364_10052137 3300006051 Bacteria 2673
69 Ga0075364_10084460 3300006051 Bacteria 2102
70 Ga0075364_10109738 3300006051 Bacteria 1840
71 Ga0075364_10120808 3300006051 Bacteria 1753
72 Ga0075364_10481953 3300006051 Bacteria 848
73 Ga0075362_10005642 3300006177 Bacteria 4597
74 Ga0075362_10075808 3300006177 Bacteria 1543
75 Ga0075367_10001876 3300006178 Bacteria 9298
76 Ga0075367_10015555 3300006178 Bacteria 4140
77 Ga0075367_10083140 3300006178 Bacteria 1939
78 Ga0075367_10139852 3300006178 Bacteria 1500
79 Ga0075370_10005210 3300006353 Bacteria 6431
80 Ga0075370_10141341 3300006353 Bacteria 1407
81 Ga0068871_100473029 3300006358 Bacteria 1126
82 Ga0075431_100337387 3300006847 Unclassified 1517
83 Ga0075433_10410131 3300006852 Unclassified 1195
84 Ga0075434_100006672 3300006871 Bacteria 10598
85 Ga0075434_100138357 3300006871 Bacteria 2454
86 Ga0075434_100218470 3300006871 Bacteria 1926
87 Ga0068865_100022333 3300006881 Bacteria 4126
88 Ga0068865_100072006 3300006881 Bacteria 2454
89 Ga0105245_10000871 3300009098 Bacteria 27350
90 Ga0114129_10003437 3300009147 Bacteria 22268
91 Ga0105248_10124858 3300009177 Bacteria 2903
92 Ga0105237_10093552 3300009545 Bacteria 2995
93 Ga0105249_10420434 3300009553 Bacteria 1370
94 Ga0105239_10001125 3300010375 Bacteria 36868
95 Ga0105239_10018892 3300010375 Bacteria 7615
96 Ga0105239_10125565 3300010375 Bacteria 2852
97 Ga0105246_10016467 3300011119 Bacteria 4682
98 Ga0105246_10557720 3300011119 Bacteria 983
99 Ga0157369_10119129 3300013105 Bacteria 2802
100 Ga0157369_10495486 3300013105 Bacteria 1264
101 Ga0163162_10017275 3300013306 Bacteria 7059
102 Ga0157372_10422778 3300013307 Bacteria 1553
103 Ga0157375_10040980 3300013308 Bacteria 4468
104 Ga0157375_10121306 3300013308 Bacteria 2724
105 Ga0163163_10226618 3300014325 Bacteria 1918
106 Ga0163163_10500497 3300014325 Bacteria 1277
107 Ga0157379_10555630 3300014968 Bacteria 1068
108 Ga0206353_10401723 3300020082 Bacteria 2814
109 Ga0207688_10074507 3300025901 Bacteria 1930
110 Ga0207647_10009800 3300025904 Bacteria 6794
111 Ga0207647_10017451 3300025904 Bacteria 4878
112 Ga0207647_10045061 3300025904 Bacteria 2753
113 Ga0207705_10081040 3300025909 Bacteria 2365
114 Ga0207705_10278524 3300025909 Bacteria 1280
115 Ga0207707_10057560 3300025912 Bacteria 3383
116 Ga0207671_10168196 3300025914 Bacteria 1701
117 Ga0207660_10018779 3300025917 Bacteria 4614
118 Ga0207662_10131510 3300025918 Bacteria 1578
119 Ga0207649_10273167 3300025920 Bacteria 1226
120 Ga0207687_10011917 3300025927 Bacteria 5686
121 Ga0207664_10273347 3300025929 Bacteria 1481
122 Ga0207690_10044063 3300025932 Bacteria 2939
123 Ga0207690_10246928 3300025932 Bacteria 1377
124 Ga0207690_10482413 3300025932 Bacteria 1001
125 Ga0207706_10186091 3300025933 Bacteria 1824
126 Ga0207709_10024365 3300025935 Bacteria 3455
127 Ga0207704_10030155 3300025938 Bacteria 3037
128 Ga0207711_10165327 3300025941 Bacteria 2005
129 Ga0207661_10006979 3300025944 Bacteria 8010
130 Ga0207661_10255213 3300025944 Bacteria 1560
131 Ga0207667_10111752 3300025949 Bacteria 2818
132 Ga0207667_10261718 3300025949 Bacteria 1769
133 Ga0207658_10017118 3300025986 Bacteria 4992
134 Ga0207677_10255699 3300026023 Bacteria 1425
135 Ga0207703_10480466 3300026035 Bacteria 1164
136 Ga0207678_10276494 3300026067 Bacteria 1441
137 Ga0207708_10023415 3300026075 Bacteria 4667
138 Ga0207702_10153248 3300026078 Bacteria 2098
139 Ga0207676_10023181 3300026095 Bacteria 4575
140 Ga0207674_10018038 3300026116 Bacteria 7687
141 Ga0207674_10608848 3300026116 Bacteria 1055
142 Ga0207675_100174492 3300026118 Bacteria 2056
143 Ga0207675_100313138 3300026118 Bacteria 1531
144 Ga0207698_10192362 3300026142 Bacteria 1819
145 Ga0209813_10010824 3300027866 Bacteria 2370
146 Ga0209813_10020386 3300027866 Bacteria 1855
147 Ga0209813_10036601 3300027866 Bacteria 1475
148 Ga0268264_10000390 3300028381 Bacteria 63138
149 Ga0268264_10077049 3300028381 Bacteria 2839
150 Ga0316576_10000074 3300031727 Bacteria 34074
151 Ga0307410_10005843 3300031852 Bacteria 6568
152 Ga0307407_10068438 3300031903 Bacteria 2103
153 Ga0307412_10302074 3300031911 Bacteria 1266
154 Ga0307409_100008911 3300031995 Bacteria 6128
155 Ga0307416_100112223 3300032002 Bacteria 2405
156 Ga0307411_10016080 3300032005 Bacteria 4227
157 Ga0307411_10036604 3300032005 Bacteria 3077
158 Ga0307415_100023810 3300032126 Bacteria 3810
159 Ga0373931_0087437 3300035691 Unclassified 1731
160 Ga0395905_0013024 3300037471 Bacteria 7991
161 Ga0436364_0854939 3300037853 Bacteria 8175
162 Ga0395901_0228355 3300038443 Bacteria 1944
163 Ga0436365_1489475 3300039437 Bacteria 1023
164 Ga0451795_1351288 3300041456 Bacteria 1026
165 Ga0451839_1246922 3300041496 Bacteria 1241
166 Ga0450907_006740 3300042146 Bacteria 1918
167 Ga0439464_0016863 3300042439 Bacteria 1977
168 Ga0466969_0010007 3300044656 Bacteria 5029
169 Ga0466969_0173208 3300044656 Bacteria 989
170 Ga0466972_0015222 3300044658 Bacteria 3846
171 Ga0466972_0029448 3300044658 Bacteria 2703
172 Ga0466972_0068594 3300044658 Bacteria 1694
173 Ga0466965_0014849 3300044683 Bacteria 3691
174 Ga0466965_0071404 3300044683 Bacteria 1746
175 Ga0466965_0078073 3300044683 Bacteria 1672
176 Ga0466966_0020019 3300044684 Bacteria 4402
177 Ga0466966_0061031 3300044684 Bacteria 2379
178 Ga0466966_0330578 3300044684 Bacteria 916
179 Ga0466961_0008262 3300044693 Bacteria 6631
180 Ga0466961_0064113 3300044693 Bacteria 2335
181 Ga0466961_0117113 3300044693 Bacteria 1674
182 Ga0466961_0130621 3300044693 Bacteria 1574
183 Ga0466963_0005938 3300044694 Bacteria 7189
184 Ga0466963_0085513 3300044694 Bacteria 2141
185 Ga0466963_0097857 3300044694 Bacteria 2005
186 Ga0466971_0017891 3300044719 Bacteria 3139
187 Ga0466970_0007701 3300044765 Bacteria 5404
188 Ga0466970_0012365 3300044765 Bacteria 4363
189 Ga0466970_0019420 3300044765 Bacteria 3524
190 Ga0466970_0021960 3300044765 Bacteria 3330
191 Ga0466960_0007150 3300044901 Bacteria 4516
192 Ga0466960_0026373 3300044901 Bacteria 2639
193 Ga0466960_0030174 3300044901 Bacteria 2494
194 Ga0466960_0070707 3300044901 Bacteria 1737
195 Ga0466960_0083566 3300044901 Bacteria 1614
196 Ga0466960_0101612 3300044901 Bacteria 1481
197 Ga0466959_0016728 3300045049 Bacteria 5365
198 Ga0466959_0223897 3300045049 Bacteria 1304
199 Ga0466959_0325030 3300045049 Bacteria 1051
200 Ga0466958_0063214 3300045836 Bacteria 2257
201 Ga0466958_0418871 3300045836 Bacteria 866
202 Ga0466967_0170289 3300045976 Bacteria 2048
203 Ga0466967_0270292 3300045976 Bacteria 1629
204 Ga0466967_0371357 3300045976 Bacteria 1387
205 Ga0466967_0751789 3300045976 Bacteria 967
206 Ga0496100_0055575 3300048903 Bacteria 2587
207 Ga0496100_0068266 3300048903 Unclassified 2364
208 Ga0496100_0098341 3300048903 Bacteria 2011
209 Ga0496100_0193247 3300048903 Bacteria 1479
210 Ga0496101_0015345 3300048904 Bacteria 5161
211 Ga0496101_0020074 3300048904 Bacteria 4569
212 Ga0496101_0058978 3300048904 Bacteria 2781
213 Ga0496101_0071607 3300048904 Bacteria 2542
214 Ga0496101_0096285 3300048904 Bacteria 2209
215 Ga0496102_0004625 3300048905 Bacteria 11647
216 Ga0496102_0016113 3300048905 Bacteria 6527
217 Ga0496102_0016823 3300048905 Bacteria 6397
218 Ga0496102_0055555 3300048905 Bacteria 3610
219 Ga0496102_0140891 3300048905 Bacteria 2261
220 Ga0496103_0030223 3300048906 Bacteria 3296
221 Ga0496103_0033914 3300048906 Bacteria 3120
222 Ga0496103_0054335 3300048906 Bacteria 2482
223 Ga0496104_0002533 3300048907 Bacteria 15741
224 Ga0496104_0014153 3300048907 Bacteria 7200
225 Ga0496104_0079375 3300048907 Bacteria 3128
226 Ga0496105_0007482 3300048908 Bacteria 8458
227 Ga0496105_0125077 3300048908 Bacteria 2120
228 Ga0496105_0209633 3300048908 Bacteria 1589
229 Ga0496106_0041368 3300048909 Bacteria 3453
230 Ga0496107_0070726 3300048910 Bacteria 2534
231 Ga0496107_0092721 3300048910 Bacteria 2208
232 Ga0496107_0179818 3300048910 Bacteria 1570
233 Ga0496108_0016149 3300048911 Bacteria 6087
234 Ga0496108_0017097 3300048911 Bacteria 5932
235 Ga0496108_0091730 3300048911 Bacteria 2582
236 Ga0496108_0285067 3300048911 Bacteria 1438
237 Ga0496108_0491337 3300048911 Bacteria 1072
238 Ga0496109_0001874 3300048912 Bacteria 17423
239 Ga0496109_0046130 3300048912 Bacteria 3957
240 Ga0496109_0055565 3300048912 Bacteria 3612
241 Ga0496109_0067778 3300048912 Bacteria 3270
242 Ga0496109_0069746 3300048912 Unclassified 3224
243 Ga0496109_0129420 3300048912 Bacteria 2355
244 Ga0496109_0137334 3300048912 Bacteria 2285
245 Ga0496109_0351140 3300048912 Bacteria 1393
246 Ga0496110_0000921 3300048913 Bacteria 20626
247 Ga0496110_0009798 3300048913 Bacteria 7759
248 Ga0496110_0013427 3300048913 Bacteria 6772
249 Ga0496110_0036961 3300048913 Bacteria 4243
250 Ga0496110_0064261 3300048913 Bacteria 3243
251 Ga0496110_0076223 3300048913 Bacteria 2981
252 Ga0496111_0027693 3300048914 Bacteria 4012
253 Ga0496111_0049206 3300048914 Unclassified 3039
254 Ga0496111_0387229 3300048914 Bacteria 1034
255 Ga0496112_0006110 3300048915 Bacteria 10528
256 Ga0496112_0054424 3300048915 Bacteria 3931
257 Ga0496112_0341986 3300048915 Bacteria 1439
258 Ga0496112_0500353 3300048915 Bacteria 1151
259 Ga0496113_0006081 3300048916 Bacteria 7609
260 Ga0496113_0009335 3300048916 Bacteria 6432
261 Ga0496113_0126901 3300048916 Bacteria 1999
262 Ga0496114_0003472 3300048917 Bacteria 12096
263 Ga0496114_0010661 3300048917 Bacteria 7315
264 Ga0496114_0045392 3300048917 Bacteria 3650
265 Ga0496114_0073760 3300048917 Bacteria 2872
266 Ga0496115_0012347 3300048918 Bacteria 6424
267 Ga0496115_0014204 3300048918 Bacteria 6025
268 Ga0496115_0090536 3300048918 Unclassified 2499
269 Ga0501031_0410885 3300049568 Bacteria 875
270 Ga0501032_0020296 3300049569 Bacteria 4630
271 Ga0501034_0007108 3300049571 Bacteria 11942
272 Ga0501034_0095551 3300049571 Bacteria 2968
273 Ga0501034_0102082 3300049571 Bacteria 2861
274 Ga0501036_0018552 3300049572 Bacteria 5831
275 Ga0501036_0038620 3300049572 Bacteria 4040
276 Ga0501036_0181632 3300049572 Bacteria 1771
277 Ga0501037_0040161 3300049573 Bacteria 3443
278 Ga0501037_0051072 3300049573 Bacteria 3024
279 Ga0501037_0328003 3300049573 Bacteria 1059
280 Ga0501038_0052667 3300049574 Bacteria 3508
281 Ga0501039_0043569 3300049575 Bacteria 3466
282 Ga0501039_0054569 3300049575 Bacteria 3093
283 Ga0501040_0151294 3300049576 Bacteria 1637
284 Ga0501041_0040661 3300049577 Bacteria 2823
285 Ga0501042_0028214 3300049578 Bacteria 3952
286 Ga0501042_0051071 3300049578 Bacteria 2950
287 Ga0501042_0324511 3300049578 Bacteria 1112
288 Ga0501043_0057956 3300049579 Bacteria 3040
289 Ga0501046_0006718 3300049580 Bacteria 10157
290 Ga0501048_0005064 3300049582 Bacteria 10043
291 Ga0501067_0001580 3300049583 Bacteria 12466
292 Ga0501067_0003346 3300049583 Bacteria 8809
293 Ga0501067_0067492 3300049583 Bacteria 1980
294 Ga0501068_0002796 3300049584 Bacteria 9283
295 Ga0501068_0040074 3300049584 Bacteria 2811
296 Ga0501069_0023659 3300049585 Bacteria 3350
297 Ga0501069_0050153 3300049585 Bacteria 2321
298 Ga0501069_0119299 3300049585 Bacteria 1506
299 Ga0501069_0166115 3300049585 Bacteria 1272
300 Ga0501070_0021212 3300049586 Bacteria 5453
301 Ga0501070_0079881 3300049586 Bacteria 2706
302 Ga0501070_0128287 3300049586 Bacteria 2096
303 Ga0501070_0190402 3300049586 Bacteria 1686
304 Ga0501071_0005339 3300049587 Bacteria 8250
305 Ga0501071_0088947 3300049587 Bacteria 2266
306 Ga0501071_0092650 3300049587 Bacteria 2221
307 Ga0501071_0301498 3300049587 Bacteria 1215
308 Ga0501072_0007764 3300049588 Bacteria 8145
309 Ga0501072_0064680 3300049588 Bacteria 2884
310 Ga0501073_0010030 3300049589 Bacteria 6963
311 Ga0501073_0029507 3300049589 Bacteria 3919
312 Ga0501073_0031343 3300049589 Bacteria 3793
313 Ga0501074_0000472 3300049590 Bacteria 24338
314 Ga0501074_0160028 3300049590 Bacteria 1608
315 Ga0501077_0132047 3300049593 Bacteria 1583
316 Ga0501077_0246596 3300049593 Bacteria 1135
317 Ga0501079_0014802 3300049741 Bacteria 5947
318 Ga0501079_0040726 3300049741 Bacteria 3585
319 Ga0501080_0003999 3300049742 Bacteria 13050
320 Ga0501080_0036525 3300049742 Bacteria 4586
321 Ga0501083_0019945 3300049744 Bacteria 4666
322 Ga0501083_0022669 3300049744 Bacteria 4357
323 Ga0501035_0055958 3300049822 Bacteria 3521
324 Ga0501035_0296179 3300049822 Bacteria 1364
325 Ga0501044_0065739 3300049823 Bacteria 3698
326 Ga0501044_0173563 3300049823 Bacteria 2126
327 nmdc:mga03683_116104_c1 3300050489 Bacteria 1187
328 nmdc:mga03683_36737_c1 3300050489 Bacteria 1994
329 nmdc:mga03n38_194430_c1 3300050490 Bacteria 1047
330 nmdc:mga03n38_196985_c1 3300050490 Bacteria 1041
331 nmdc:mga03n38_39739_c1 3300050490 Bacteria 2041
332 nmdc:mga03n38_66684_c1 3300050490 Bacteria 1654
333 nmdc:mga00v17_111760_c1 3300050491 Bacteria 1734
334 nmdc:mga00v17_23479_c1 3300050491 Bacteria 3567
335 nmdc:mga00v17_31256_c1 3300050491 Bacteria 3139
336 nmdc:mga00v17_350851_c1 3300050491 Bacteria 959
337 nmdc:mga0yw44_129941_c1 3300050492 Bacteria 1630
338 nmdc:mga0yw44_13345_c1 3300050492 Bacteria 4323
339 nmdc:mga0yw44_141902_c1 3300050492 Bacteria 1562
340 nmdc:mga0yw44_1717_c1 3300050492 Bacteria 8886
341 nmdc:mga0yw44_173214_c1 3300050492 Bacteria 1418
342 nmdc:mga0yw44_174804_c1 3300050492 Bacteria 1411
343 nmdc:mga0yw44_223866_c1 3300050492 Bacteria 1247
344 nmdc:mga0yw44_27323_c1 3300050492 Bacteria 3267
345 nmdc:mga0yw44_276206_c1 3300050492 Bacteria 1122
346 nmdc:mga0yw44_37343_c1 3300050492 Bacteria 2868
347 nmdc:mga0yw44_63261_c1 3300050492 Bacteria 2275
348 nmdc:mga06z11_3667_c1 3300050494 Bacteria 5963
349 nmdc:mga06z11_69843_c1 3300050494 Bacteria 1856
350 nmdc:mga06z11_83475_c1 3300050494 Bacteria 1719
351 nmdc:mga04h51_28410_c1 3300050495 Bacteria 1745
352 nmdc:mga07m45_35341_c1 3300050496 Bacteria 2779
353 nmdc:mga07m45_54108_c1 3300050496 Bacteria 2268
354 nmdc:mga07m45_63525_c1 3300050496 Bacteria 2094
355 nmdc:mga07m45_80361_c1 3300050496 Bacteria 1862
356 nmdc:mga09592_543786_c1 3300050508 Unclassified 998
357 nmdc:mga0n895_147724_c1 3300050512 Bacteria 2380
358 nmdc:mga0n895_208782_c1 3300050512 Bacteria 1983
359 nmdc:mga0n895_20938_c1 3300050512 Bacteria 6108
360 nmdc:mga0a205_84150_c1 3300050515 Unclassified 3072
361 Ga0500644_0000086 3300053088 Bacteria 56950
362 Ga0500554_041648 3300053102 Bacteria 1412
363 Ga0500556_0000560 3300053104 Bacteria 24819
364 Ga0500593_000116 3300053117 Bacteria 30957
365 Ga0500573_0053371 3300053140 Bacteria 2323
366 Ga0500573_0126411 3300053140 Bacteria 1419
367 Ga0501084_0035080 3300054114 Bacteria 4193
368 Ga0501084_0098330 3300054114 Bacteria 2457
369 Ga0501082_0027243 3300060353 Bacteria 4921
370 Ga0501082_0048058 3300060353 Bacteria 3677
371 Ga0501082_0260082 3300060353 Bacteria 1510
372 Ga0466962_0015924 3300061719 Bacteria 3629
373 Ga0530510_0237130 3300061734 Bacteria 1358
374 2644035198 2643221604 Bacteria 5014917
375 2644092392 2643221615 Bacteria 5487866
376 2644323348 2643221657 Bacteria 5490246
377 2774396592 2773857762 Bacteria 5971770
378 2809198256 2808606439 Bacteria 5952208
379 2812353073 2811994878 Bacteria 5992952
380 2855389222 2855386786 Bacteria 4752232
381 2857484974 2857481737 Bacteria 4761446
382 2891969300 2891968417 Bacteria 5821697
383 2984580655 2984576629 Bacteria 4248407
384 2990258347 2990256926 Bacteria 4252839
385 Ga0466967_0016504
386 MBSR1b_contig_762806
387 Ga0070658_10023034
388 Ga0070658_10092411
389 Ga0070683_100016392
390 Ga0070683_100077502
391 Ga0068869_100197022
392 Ga0070680_100282354
393 Ga0070682_100132294
394 Ga0068868_100117805
395 Ga0068868_100372669
396 Ga0070660_100055192
397 Ga0070661_100279284
398 Ga0070692_10055536
399 Ga0070674_100245870
400 Ga0070674_100453166
401 Ga0070659_100014661
402 Ga0070667_100034005
403 Ga0070667_100275671
404 Ga0070714_100355120
405 Ga0070701_10059187
406 Ga0070700_100266074
407 Ga0070694_100070741
408 Ga0070663_100374530
409 Ga0070678_100168971
410 Ga0070681_10056474
411 Ga0070685_10080268
412 Ga0070679_100004104
413 Ga0070684_100002154
414 Ga0070684_100119294
415 Ga0070684_100229695
416 Ga0070695_100034219
417 Ga0070704_100006334
418 Ga0068855_100076140
419 Ga0068855_100278838
420 Ga0068855_100938282
421 Ga0068856_100118947
422 Ga0068852_100823383
423 Ga0068864_100271190
424 Ga0068861_100387931
425 Ga0068858_100017195
426 Ga0068860_100000282
427 Ga0068860_100058167
428 Ga0068860_100858196
429 Ga0081539_10026786
430 Ga0081539_10116663
431 Ga0075365_10004237
432 Ga0075365_10006080
433 Ga0075365_10018354
434 Ga0075365_10023961
435 Ga0075365_10030585
436 Ga0075365_10043192
437 Ga0075365_10044965
438 Ga0075365_10071810
439 Ga0075365_10102595
440 Ga0075365_10142221
441 Ga0075365_10206009
442 Ga0075365_10322185
443 Ga0075365_10363389
444 Ga0075368_10000780
445 Ga0075368_10041188
446 Ga0075363_100014307
447 Ga0075363_100041422
448 Ga0075363_100050060
449 Ga0075363_100063672
450 Ga0075363_100229424
451 Ga0075364_10040942
452 Ga0075364_10052137
453 Ga0075364_10084460
454 Ga0075364_10109738
455 Ga0075364_10120808
456 Ga0075364_10481953
457 Ga0075362_10005642
458 Ga0075362_10075808
459 Ga0075367_10001876
460 Ga0075367_10015555
461 Ga0075367_10083140
462 Ga0075367_10139852
463 Ga0075370_10005210
464 Ga0075370_10141341
465 Ga0068871_100473029
466 Ga0075431_100337387
467 Ga0075433_10410131
468 Ga0075434_100006672
469 Ga0075434_100138357
470 Ga0075434_100218470
471 Ga0068865_100022333
472 Ga0068865_100072006
473 Ga0105245_10000871
474 Ga0114129_10003437
475 Ga0105248_10124858
476 Ga0105237_10093552
477 Ga0105249_10420434
478 Ga0105239_10001125
479 Ga0105239_10018892
480 Ga0105239_10125565
481 Ga0105246_10016467
482 Ga0105246_10557720
483 Ga0157369_10119129
484 Ga0157369_10495486
485 Ga0163162_10017275
486 Ga0157372_10422778
487 Ga0157375_10040980
488 Ga0157375_10121306
489 Ga0163163_10226618
490 Ga0163163_10500497
491 Ga0157379_10555630
492 Ga0206353_10401723
493 Ga0207688_10074507
494 Ga0207647_10009800
495 Ga0207647_10017451
496 Ga0207647_10045061
497 Ga0207705_10081040
498 Ga0207705_10278524
499 Ga0207707_10057560
500 Ga0207671_10168196
501 Ga0207660_10018779
502 Ga0207662_10131510
503 Ga0207649_10273167
504 Ga0207687_10011917
505 Ga0207664_10273347
506 Ga0207690_10044063
507 Ga0207690_10246928
508 Ga0207690_10482413
509 Ga0207706_10186091
510 Ga0207709_10024365
511 Ga0207704_10030155
512 Ga0207711_10165327
513 Ga0207661_10006979
514 Ga0207661_10255213
515 Ga0207667_10111752
516 Ga0207667_10261718
517 Ga0207658_10017118
518 Ga0207677_10255699
519 Ga0207703_10480466
520 Ga0207678_10276494
521 Ga0207708_10023415
522 Ga0207702_10153248
523 Ga0207676_10023181
524 Ga0207674_10018038
525 Ga0207674_10608848
526 Ga0207675_100174492
527 Ga0207675_100313138
528 Ga0207698_10192362
529 Ga0209813_10010824
530 Ga0209813_10020386
531 Ga0209813_10036601
532 Ga0268264_10000390
533 Ga0268264_10077049
534 Ga0316576_10000074
535 Ga0307410_10005843
536 Ga0307407_10068438
537 Ga0307412_10302074
538 Ga0307409_100008911
539 Ga0307416_100112223
540 Ga0307411_10016080
541 Ga0307411_10036604
542 Ga0307415_100023810
543 Ga0373931_0087437
544 Ga0395905_0013024
545 Ga0436364_0854939
546 Ga0395901_0228355
547 Ga0436365_1489475
548 Ga0451795_1351288
549 Ga0451839_1246922
550 Ga0450907_006740
551 Ga0439464_0016863
552 Ga0466969_0010007
553 Ga0466969_0173208
554 Ga0466972_0015222
555 Ga0466972_0029448
556 Ga0466972_0068594
557 Ga0466965_0014849
558 Ga0466965_0071404
559 Ga0466965_0078073
560 Ga0466966_0020019
561 Ga0466966_0061031
562 Ga0466966_0330578
563 Ga0466961_0008262
564 Ga0466961_0064113
565 Ga0466961_0117113
566 Ga0466961_0130621
567 Ga0466963_0005938
568 Ga0466963_0085513
569 Ga0466963_0097857
570 Ga0466971_0017891
571 Ga0466970_0007701
572 Ga0466970_0012365
573 Ga0466970_0019420
574 Ga0466970_0021960
575 Ga0466960_0007150
576 Ga0466960_0026373
577 Ga0466960_0030174
578 Ga0466960_0070707
579 Ga0466960_0083566
580 Ga0466960_0101612
581 Ga0466959_0016728
582 Ga0466959_0223897
583 Ga0466959_0325030
584 Ga0466958_0063214
585 Ga0466958_0418871
586 Ga0466967_0170289
587 Ga0466967_0270292
588 Ga0466967_0371357
589 Ga0466967_0751789
590 Ga0496100_0055575
591 Ga0496100_0068266
592 Ga0496100_0098341
593 Ga0496100_0193247
594 Ga0496101_0015345
595 Ga0496101_0020074
596 Ga0496101_0058978
597 Ga0496101_0071607
598 Ga0496101_0096285
599 Ga0496102_0004625
600 Ga0496102_0016113
601 Ga0496102_0016823
602 Ga0496102_0055555
603 Ga0496102_0140891
604 Ga0496103_0030223
605 Ga0496103_0033914
606 Ga0496103_0054335
607 Ga0496104_0002533
608 Ga0496104_0014153
609 Ga0496104_0079375
610 Ga0496105_0007482
611 Ga0496105_0125077
612 Ga0496105_0209633
613 Ga0496106_0041368
614 Ga0496107_0070726
615 Ga0496107_0092721
616 Ga0496107_0179818
617 Ga0496108_0016149
618 Ga0496108_0017097
619 Ga0496108_0091730
620 Ga0496108_0285067
621 Ga0496108_0491337
622 Ga0496109_0001874
623 Ga0496109_0046130
624 Ga0496109_0055565
625 Ga0496109_0067778
626 Ga0496109_0069746
627 Ga0496109_0129420
628 Ga0496109_0137334
629 Ga0496109_0351140
630 Ga0496110_0000921
631 Ga0496110_0009798
632 Ga0496110_0013427
633 Ga0496110_0036961
634 Ga0496110_0064261
635 Ga0496110_0076223
636 Ga0496111_0027693
637 Ga0496111_0049206
638 Ga0496111_0387229
639 Ga0496112_0006110
640 Ga0496112_0054424
641 Ga0496112_0341986
642 Ga0496112_0500353
643 Ga0496113_0006081
644 Ga0496113_0009335
645 Ga0496113_0126901
646 Ga0496114_0003472
647 Ga0496114_0010661
648 Ga0496114_0045392
649 Ga0496114_0073760
650 Ga0496115_0012347
651 Ga0496115_0014204
652 Ga0496115_0090536
653 Ga0501031_0410885
654 Ga0501032_0020296
655 Ga0501034_0007108
656 Ga0501034_0095551
657 Ga0501034_0102082
658 Ga0501036_0018552
659 Ga0501036_0038620
660 Ga0501036_0181632
661 Ga0501037_0040161
662 Ga0501037_0051072
663 Ga0501037_0328003
664 Ga0501038_0052667
665 Ga0501039_0043569
666 Ga0501039_0054569
667 Ga0501040_0151294
668 Ga0501041_0040661
669 Ga0501042_0028214
670 Ga0501042_0051071
671 Ga0501042_0324511
672 Ga0501043_0057956
673 Ga0501046_0006718
674 Ga0501048_0005064
675 Ga0501067_0001580
676 Ga0501067_0003346
677 Ga0501067_0067492
678 Ga0501068_0002796
679 Ga0501068_0040074
680 Ga0501069_0023659
681 Ga0501069_0050153
682 Ga0501069_0119299
683 Ga0501069_0166115
684 Ga0501070_0021212
685 Ga0501070_0079881
686 Ga0501070_0128287
687 Ga0501070_0190402
688 Ga0501071_0005339
689 Ga0501071_0088947
690 Ga0501071_0092650
691 Ga0501071_0301498
692 Ga0501072_0007764
693 Ga0501072_0064680
694 Ga0501073_0010030
695 Ga0501073_0029507
696 Ga0501073_0031343
697 Ga0501074_0000472
698 Ga0501074_0160028
699 Ga0501077_0132047
700 Ga0501077_0246596
701 Ga0501079_0014802
702 Ga0501079_0040726
703 Ga0501080_0003999
704 Ga0501080_0036525
705 Ga0501083_0019945
706 Ga0501083_0022669
707 Ga0501035_0055958
708 Ga0501035_0296179
709 Ga0501044_0065739
710 Ga0501044_0173563
711 nmdc:mga03683_116104_c1
712 nmdc:mga03683_36737_c1
713 nmdc:mga03n38_194430_c1
714 nmdc:mga03n38_196985_c1
715 nmdc:mga03n38_39739_c1
716 nmdc:mga03n38_66684_c1
717 nmdc:mga00v17_111760_c1
718 nmdc:mga00v17_23479_c1
719 nmdc:mga00v17_31256_c1
720 nmdc:mga00v17_350851_c1
721 nmdc:mga0yw44_129941_c1
722 nmdc:mga0yw44_13345_c1
723 nmdc:mga0yw44_141902_c1
724 nmdc:mga0yw44_1717_c1
725 nmdc:mga0yw44_173214_c1
726 nmdc:mga0yw44_174804_c1
727 nmdc:mga0yw44_223866_c1
728 nmdc:mga0yw44_27323_c1
729 nmdc:mga0yw44_276206_c1
730 nmdc:mga0yw44_37343_c1
731 nmdc:mga0yw44_63261_c1
732 nmdc:mga06z11_3667_c1
733 nmdc:mga06z11_69843_c1
734 nmdc:mga06z11_83475_c1
735 nmdc:mga04h51_28410_c1
736 nmdc:mga07m45_35341_c1
737 nmdc:mga07m45_54108_c1
738 nmdc:mga07m45_63525_c1
739 nmdc:mga07m45_80361_c1
740 nmdc:mga09592_543786_c1
741 nmdc:mga0n895_147724_c1
742 nmdc:mga0n895_208782_c1
743 nmdc:mga0n895_20938_c1
744 nmdc:mga0a205_84150_c1
745 Ga0500644_0000086
746 Ga0500554_041648
747 Ga0500556_0000560
748 Ga0500593_000116
749 Ga0500573_0053371
750 Ga0500573_0126411
751 Ga0501084_0035080
752 Ga0501084_0098330
753 Ga0501082_0027243
754 Ga0501082_0048058
755 Ga0501082_0260082
756 Ga0466962_0015924
757 Ga0530510_0237130
758 2644035198
759 2644092392
760 2644323348
761 2774396592
762 2809198256
763 2812353073
764 2855389222
765 2857484974
766 2891969300
767 2984580655
768 2990258347

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

53

248

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

59

251

0.92

PF08659

KR

KR domain

54

231

0.87

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

55

236

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bmv-assembly4.cif.gz_I short-chain dehydrogenase from sphingobium yanoikuyae in complex with nadph 0.9442 10 237
3uf0-assembly1.cif.gz_A crystal structure of a putative nad(p) dependent gluconate 5-dehydrogenase from beutenbergia cavernae(efi target efi-502044) with bound nadp (low occupancy) 0.9106 10 241
7e28-assembly1.cif.gz_B crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.9099 10 234
7e3x-assembly1.cif.gz_B crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.9078 11 237
8g93-assembly1.cif.gz_B crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9075 9 250
ID Description Score Start End Superfamily
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9437 93 191 3.40.50.720
af_Q10782_3_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9408 7 252 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9326 10 197 3.40.50.720
af_Q54CD7_32_271_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9217 9 224 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9217 10 79 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A532V9A5-F1-model_v4 Short-chain dehydrogenase 0.9658 6 261 GO:0016020
GO:0016491
AF-A0A3L7VYX6-F1-model_v4 SDR family oxidoreductase 0.9532 7 254 GO:0016491
AF-A0A1A8VD90-F1-model_v4 Retinol dehydrogenase 8b 0.9499 87 184 GO:0004745
GO:0005829
GO:0016020
GO:0042572
AF-A0A2H5W9U6-F1-model_v4 Serine 3-dehydrogenase (EC 1.1.1.276) 0.9494 7 253 GO:0016020
GO:0031132
AF-A0A2V8IK81-F1-model_v4 Short-chain dehydrogenase 0.9484 7 175 GO:0016020
GO:0016491

Map