F426905

General Info

Members Datasets Scaffolds Average Seq Length
374 258 304 463

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2808606306|2808629457
Length 507
Sequence SRGARRHAAGHRRPGTAGSGRVTRIEGMSKVLQSLPVGERIGIAFSGGLDTSVAVAWMRDKGAVPCTYTGDLGQPDEDDIEAIPGRALEYGAEVARLVDCKTALVEEGFVALACGAFHIRSGGKTYFNTTPLGRAVTGTLLVRAMKEDGVDIWGDGSTYKGNDIERFYRYGLLANPALRIYKPWLDADFVTELGGRTEMSEWLVAHGFPYRDSVEKAYSTDANIWGATHEAKTLEHLDVSLETVEPIMGVKYWDPSVEIATEDVTVTFDRGRPVALNGVEFTDPVALVFEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLFIAYERLVNSILNEDTLATYHEQGRRLGRLMYEGRWLEPQSLMLRESIQKWVGSTITGTVTLRLRRGDDWTIVDTSATGMSYSPEKLSMERVGDAAFGPTDRIGQLTMRNLDIADSRARLEQYAGMGLLGGATGELVGRVHAGESGEITGHAAPFDVEREELADATDAANEASAFDLGTD

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
3 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
4 2643221546 Microbacterium sp. Root53 Isolate Unclassified
5 2643221553 Microbacterium sp. Root553 Isolate Unclassified
6 2643221566 Microbacterium sp. Root166 Isolate Unclassified
7 2643221575 Microbacterium sp. Root61 Isolate Unclassified
8 2643221585 Pelomonas sp. Root662 Isolate Unclassified
9 2643221590 Nocardioides sp. Root682 Isolate Unclassified
10 2643221597 Microbacterium sp. Root180 Isolate Unclassified
11 2643221604 Nocardioides sp. Root190 Isolate Unclassified
12 2643221630 Microbacterium sp. Root322 Isolate Unclassified
13 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
14 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
15 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
16 2643221649 Leifsonia sp. Root4 Isolate Unclassified
17 2643221656 Pelomonas sp. Root405 Isolate Unclassified
18 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
19 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
20 2738541337 Pelomonas sp. BT06 Isolate Unclassified
21 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
22 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
23 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
24 2773857759 Microbacterium sp. 1294 Isolate Unclassified
25 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
26 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
27 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
28 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
29 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
30 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
31 2831864461 Roseateles noduli HZ7 Isolate Nodule
32 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
33 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
34 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
35 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
36 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
37 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
38 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
39 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
40 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
41 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
42 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
43 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
44 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
45 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
46 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
47 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
48 2919069694 Microbacterium sp. 1154 Isolate Unclassified
49 2919395869 Microbacterium resistens 2980 Isolate Unclassified
50 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
51 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
52 2928153084 Leifsonia sp. 563 Isolate Unclassified
53 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
54 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
55 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
56 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
57 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
58 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
59 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
60 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
61 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
62 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
63 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
64 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
65 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
66 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
67 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
68 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
69 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
70 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
71 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
72 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
73 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
74 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
75 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
76 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
77 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
78 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
79 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
80 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
81 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
82 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
83 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
84 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
85 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
86 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
87 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
88 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
89 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
90 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
91 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
92 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
93 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
94 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
95 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
96 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
97 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
98 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
99 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
100 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
101 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
102 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
103 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
104 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
105 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
106 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
107 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
108 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
109 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
110 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
111 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
112 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
113 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
114 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
115 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
116 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
120 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
122 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
124 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
126 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
147 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
148 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
150 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
151 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
152 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
153 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
154 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
155 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
156 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
157 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
158 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
159 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
160 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
161 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
162 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
163 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
164 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
165 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
166 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
167 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
168 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
169 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
170 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
171 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
172 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
173 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
174 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
175 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
176 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
177 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
178 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
179 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
180 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
181 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
182 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
183 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
184 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
185 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
186 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
187 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
188 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
189 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
190 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
191 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
192 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
193 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
194 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
195 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
196 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
197 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
198 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
199 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
200 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
201 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
202 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
203 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
204 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
205 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
206 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
207 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
208 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
209 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
210 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
211 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
212 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
213 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
214 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
215 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
216 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
217 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
218 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
219 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
220 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
221 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
222 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
223 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
224 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
225 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
227 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
228 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
229 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
230 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
231 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
233 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
234 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
235 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
236 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
237 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
238 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
239 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
240 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
241 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
242 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
243 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
244 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
245 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
246 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
247 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
248 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
249 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
250 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
251 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
252 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
253 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
254 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
255 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
256 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
257 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
258 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.95
Metatranscriptomes 1.34
Isolates 18.72

Biome Distribution

Category Percentage (%)
Aerial Root 0.53
Bulb 0
Endosphere 10.16
Nodule 0.8
Rhizoplane 8.02
Rhizosphere 55.61
Stem 0
Stem Tuber 0
Unclassified 24.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000242 3300001979 Bacteria 23108
2 Ga0006562J51391_1054739 3300003578 Bacteria 18638
3 Ga0006562J51391_1054740 3300003578 Bacteria 18110
4 Ga0006562J51391_1054825 3300003578 Bacteria 3860
5 Ga0055539_1000019 3300003752 Bacteria 341727
6 Ga0055533_1000023 3300003756 Bacteria 341727
7 Ga0055531_10000060 3300003794 Bacteria 120626
8 Ga0055543_1000673 3300004625 Bacteria 17829
9 Ga0065165_1000407 3300005262 Bacteria 68987
10 Ga0065165_1000455 3300005262 Bacteria 64259
11 Ga0070683_100058397 3300005329 Bacteria 3584
12 Ga0070690_100012297 3300005330 Bacteria 5036
13 Ga0070670_100007980 3300005331 Bacteria 9003
14 Ga0068868_100002993 3300005338 Bacteria 11740
15 Ga0070661_100011524 3300005344 Bacteria 6159
16 Ga0070675_100085616 3300005354 Bacteria 2633
17 Ga0070671_100053558 3300005355 Bacteria 3354
18 Ga0070673_100052646 3300005364 Bacteria 3195
19 Ga0070659_100154602 3300005366 Bacteria 1872
20 Ga0070667_100012835 3300005367 Bacteria 6922
21 Ga0070714_100053463 3300005435 Bacteria 3447
22 Ga0070714_100199702 3300005435 Bacteria 1829
23 Ga0070713_100049478 3300005436 Bacteria 3467
24 Ga0070679_100207749 3300005530 Bacteria 1922
25 Ga0070672_100002134 3300005543 Bacteria 12481
26 Ga0070665_100032017 3300005548 Bacteria 5293
27 Ga0070664_100005092 3300005564 Bacteria 10542
28 Ga0068856_100030107 3300005614 Bacteria 5306
29 Ga0068852_100096143 3300005616 Bacteria 2662
30 Ga0068864_100011318 3300005618 Bacteria 7372
31 Ga0068863_100005916 3300005841 Bacteria 11996
32 Ga0081455_10069403 3300005937 Bacteria 2931
33 Ga0075365_10016186 3300006038 Bacteria 4529
34 Ga0075364_10014324 3300006051 Bacteria 4899
35 Ga0075364_10105488 3300006051 Bacteria 1877
36 Ga0075367_10022652 3300006178 Bacteria 3526
37 Ga0075369_10015804 3300006186 Bacteria 3035
38 Ga0097621_100003123 3300006237 Bacteria 11365
39 Ga0075370_10002416 3300006353 Bacteria 8653
40 Ga0075370_10002796 3300006353 Bacteria 8182
41 Ga0099823_1000003 3300006944 Bacteria 189058
42 Ga0105240_10001299 3300009093 Bacteria 43154
43 Ga0105240_10099864 3300009093 Bacteria 3532
44 Ga0105245_10177173 3300009098 Bacteria 2034
45 Ga0105243_10007648 3300009148 Bacteria 8304
46 Ga0105243_10094337 3300009148 Bacteria 2471
47 Ga0105243_10160839 3300009148 Bacteria 1936
48 Ga0105241_10051393 3300009174 Bacteria 3143
49 Ga0105248_10003618 3300009177 Bacteria 17145
50 Ga0105237_10024634 3300009545 Bacteria 6154
51 Ga0105237_10095874 3300009545 Bacteria 2957
52 Ga0105238_10004469 3300009551 Bacteria 13858
53 Ga0157319_1000002 3300012497 Bacteria 410803
54 Ga0171462_1005 3300013250 Bacteria 598379
55 Ga0157374_10118899 3300013296 Bacteria 2549
56 Ga0163162_10005753 3300013306 Bacteria 11993
57 Ga0163162_10143866 3300013306 Bacteria 2499
58 Ga0157372_10037792 3300013307 Bacteria 5326
59 Ga0157372_10096773 3300013307 Bacteria 3365
60 Ga0157372_10111924 3300013307 Bacteria 3128
61 Ga0157375_10004826 3300013308 Bacteria 11710
62 Ga0163163_10034475 3300014325 Bacteria 4902
63 Ga0163163_10125393 3300014325 Bacteria 2605
64 Ga0163163_10214244 3300014325 Bacteria 1975
65 Ga0157379_10010368 3300014968 Bacteria 8119
66 Ga0206353_10119690 3300020082 Bacteria 2110
67 Ga0206353_11018149 3300020082 Bacteria 2193
68 Ga0209566_100031 3300025225 Bacteria 341555
69 Ga0209674_100001 3300025226 Bacteria 4013750
70 Ga0209563_100001 3300025230 Bacteria 4013775
71 Ga0209646_1000030 3300025246 Bacteria 384216
72 Ga0209677_100001 3300025253 Bacteria 4013787
73 Ga0209233_1000573 3300025261 Bacteria 19670
74 Ga0209455_1002272 3300025272 Bacteria 7560
75 Ga0209673_1011878 3300025273 Bacteria 3554
76 Ga0209050_1001861 3300025298 Bacteria 20339
77 Ga0209050_1007788 3300025298 Bacteria 5899
78 Ga0209256_1002110 3300025299 Bacteria 17294
79 Ga0209051_1005247 3300025303 Bacteria 7646
80 Ga0209051_1005347 3300025303 Bacteria 7543
81 Ga0209257_1000103 3300025304 Bacteria 245859
82 Ga0209257_1015070 3300025304 Bacteria 3253
83 Ga0207647_10030220 3300025904 Bacteria 3497
84 Ga0207705_10099224 3300025909 Bacteria 2141
85 Ga0207695_10000360 3300025913 Bacteria 104334
86 Ga0207671_10000256 3300025914 Bacteria 79879
87 Ga0207671_10048001 3300025914 Bacteria 3159
88 Ga0207650_10005125 3300025925 Bacteria 8942
89 Ga0207644_10193409 3300025931 Bacteria 1601
90 Ga0207709_10089267 3300025935 Bacteria 2009
91 Ga0207691_10002926 3300025940 Bacteria 16660
92 Ga0207691_10189893 3300025940 Bacteria 1792
93 Ga0207711_10038402 3300025941 Bacteria 4071
94 Ga0207661_10080911 3300025944 Bacteria 2682
95 Ga0207679_10162617 3300025945 Bacteria 1829
96 Ga0207667_10054700 3300025949 Bacteria 4198
97 Ga0207668_10118490 3300025972 Bacteria 2000
98 Ga0207658_10014282 3300025986 Bacteria 5438
99 Ga0207658_10113972 3300025986 Bacteria 2143
100 Ga0207677_10006858 3300026023 Bacteria 6258
101 Ga0207703_10072380 3300026035 Bacteria 2849
102 Ga0207702_10012664 3300026078 Bacteria 7020
103 Ga0207641_10017883 3300026088 Bacteria 5807
104 Ga0209389_1000268 3300027296 Bacteria 32841
105 Ga0209371_1009467 3300027312 Bacteria 3094
106 Ga0268266_10011873 3300028379 Bacteria 7545
107 Ga0265337_1001689 3300028556 Bacteria 10711
108 Ga0307515_10091925 3300028794 Bacteria 3784
109 Ga0268256_1010106 3300030500 Bacteria 3079
110 Ga0265320_10000106 3300031240 Bacteria 72024
111 Ga0265339_10000185 3300031249 Bacteria 52886
112 Ga0265316_10000130 3300031344 Bacteria 81991
113 Ga0307408_100000038 3300031548 Bacteria 183170
114 Ga0307408_100005248 3300031548 Bacteria 8685
115 Ga0307514_10000420 3300031649 Bacteria 94078
116 Ga0265314_10000003 3300031711 Bacteria 1653386
117 Ga0265314_10007184 3300031711 Bacteria 9690
118 Ga0307406_10000150 3300031901 Bacteria 41061
119 Ga0307406_10124280 3300031901 Bacteria 1799
120 Ga0307412_10151178 3300031911 Bacteria 1713
121 Ga0307414_10068738 3300032004 Bacteria 2543
122 Ga0307411_10000044 3300032005 Bacteria 36504
123 Ga0373923_0007887 3300035111 Bacteria 3766
124 Ga0373939_0000781 3300035114 Bacteria 7844
125 Ga0373931_0000513 3300035691 Bacteria 15871
126 Ga0373937_0000955 3300036401 Bacteria 24554
127 Ga0373937_0050170 3300036401 Bacteria 3822
128 Ga0373937_0089494 3300036401 Bacteria 2850
129 Ga0373937_0166658 3300036401 Bacteria 2066
130 Ga0395898_0002891 3300037466 Bacteria 19576
131 Ga0395898_0050017 3300037466 Bacteria 4093
132 Ga0395898_0263670 3300037466 Bacteria 1643
133 Ga0395901_0029938 3300038443 Bacteria 5608
134 Ga0451793_1508536 3300041452 Bacteria 6816
135 Ga0439431_0003087 3300041997 Bacteria 3657
136 Ga0450917_000264 3300042120 Bacteria 3863
137 Ga0450888_000001 3300042126 Bacteria 20561
138 Ga0450890_001846 3300042127 Bacteria 3000
139 Ga0450891_000126 3300042129 Bacteria 6900
140 Ga0450892_000272 3300042130 Bacteria 6175
141 Ga0450889_000218 3300042144 Bacteria 6296
142 Ga0439434_0003954 3300042435 Bacteria 4328
143 Ga0450893_0002610 3300042532 Bacteria 2819
144 Ga0451577_0008454 3300042876 Bacteria 10017
145 Ga0451577_0027343 3300042876 Bacteria 5162
146 Ga0453683_0001222 3300044673 Bacteria 23029
147 Ga0453683_0003391 3300044673 Bacteria 11763
148 Ga0466965_0011766 3300044683 Bacteria 4107
149 Ga0466966_0037200 3300044684 Bacteria 3140
150 Ga0466966_0058411 3300044684 Bacteria 2438
151 Ga0466961_0018766 3300044693 Bacteria 4450
152 Ga0466961_0063099 3300044693 Bacteria 2354
153 Ga0466961_0083665 3300044693 Bacteria 2018
154 Ga0466961_0116460 3300044693 Bacteria 1679
155 Ga0453684_0000028 3300044712 Bacteria 762381
156 Ga0453684_0000067 3300044712 Bacteria 461903
157 Ga0453684_0020623 3300044712 Bacteria 9921
158 Ga0453684_0044161 3300044712 Bacteria 5971
159 Ga0453684_0061987 3300044712 Bacteria 4794
160 Ga0466970_0004423 3300044765 Bacteria 6928
161 Ga0466970_0012719 3300044765 Bacteria 4305
162 Ga0466970_0016294 3300044765 Bacteria 3829
163 Ga0466970_0042407 3300044765 Bacteria 2420
164 Ga0466957_0012909 3300044842 Bacteria 4841
165 Ga0466957_0044328 3300044842 Bacteria 2695
166 Ga0466957_0095416 3300044842 Bacteria 1868
167 Ga0466957_0112644 3300044842 Bacteria 1727
168 Ga0466960_0019238 3300044901 Bacteria 3006
169 Ga0466960_0027888 3300044901 Bacteria 2580
170 Ga0466959_0001374 3300045049 Bacteria 14858
171 Ga0466959_0020687 3300045049 Bacteria 4849
172 Ga0451576_0001910 3300045051 Bacteria 33370
173 Ga0451576_0011402 3300045051 Bacteria 10104
174 Ga0451576_0029663 3300045051 Bacteria 5852
175 Ga0451576_0113933 3300045051 Bacteria 2814
176 Ga0466958_0003632 3300045836 Bacteria 8045
177 Ga0466967_0013875 3300045976 Bacteria 6248
178 Ga0466967_0037160 3300045976 Bacteria 4164
179 Ga0466967_0049378 3300045976 Bacteria 3679
180 Ga0495627_002021 3300046453 Bacteria 10436
181 Ga0495592_0019151 3300046454 Bacteria 5208
182 Ga0495639_0065968 3300046475 Bacteria 1666
183 Ga0495607_0093796 3300046501 Bacteria 1620
184 Ga0495645_0013163 3300046543 Bacteria 5849
185 Ga0495667_0002449 3300046559 Bacteria 12391
186 Ga0495613_0199404 3300046689 Bacteria 1411
187 Ga0495581_0099886 3300047315 Bacteria 1686
188 Ga0495674_0040684 3300047319 Bacteria 4155
189 Ga0495686_0003102 3300047472 Bacteria 14686
190 Ga0496100_0032477 3300048903 Bacteria 3256
191 Ga0496100_0075910 3300048903 Bacteria 2255
192 Ga0496101_0027743 3300048904 Bacteria 3948
193 Ga0496101_0083582 3300048904 Bacteria 2364
194 Ga0496102_0038929 3300048905 Bacteria 4294
195 Ga0496102_0130036 3300048905 Bacteria 2356
196 Ga0496103_0023486 3300048906 Bacteria 3718
197 Ga0496103_0039155 3300048906 Bacteria 2913
198 Ga0496103_0074178 3300048906 Bacteria 2132
199 Ga0496105_0004428 3300048908 Bacteria 10575
200 Ga0496105_0097110 3300048908 Bacteria 2433
201 Ga0496105_0269499 3300048908 Bacteria 1375
202 Ga0496107_0016582 3300048910 Bacteria 5175
203 Ga0496108_0071633 3300048911 Bacteria 2925
204 Ga0496109_0020717 3300048912 Bacteria 5807
205 Ga0496110_0079504 3300048913 Bacteria 2920
206 Ga0496111_0046480 3300048914 Bacteria 3126
207 Ga0496111_0068971 3300048914 Bacteria 2571
208 Ga0496111_0172571 3300048914 Bacteria 1607
209 Ga0496114_0014471 3300048917 Bacteria 6337
210 Ga0496114_0015297 3300048917 Bacteria 6168
211 Ga0496114_0027267 3300048917 Bacteria 4678
212 Ga0496114_0040327 3300048917 Bacteria 3865
213 Ga0496114_0044515 3300048917 Bacteria 3682
214 Ga0496114_0065221 3300048917 Bacteria 3051
215 Ga0496114_0154716 3300048917 Bacteria 1990
216 Ga0496114_0246860 3300048917 Bacteria 1570
217 Ga0496114_0259436 3300048917 Bacteria 1530
218 Ga0496115_0050796 3300048918 Bacteria 3323
219 Ga0496116_0010953 3300048919 Bacteria 7555
220 Ga0496117_0000014 3300048920 Bacteria 584427
221 Ga0496117_0000978 3300048920 Bacteria 43772
222 Ga0496117_0004949 3300048920 Bacteria 14308
223 Ga0496117_0081154 3300048920 Bacteria 2129
224 Ga0496118_0022428 3300048921 Bacteria 5519
225 Ga0496118_0047499 3300048921 Bacteria 3325
226 Ga0496118_0053202 3300048921 Bacteria 3081
227 Ga0496119_0000792 3300048922 Bacteria 42312
228 Ga0496119_0000988 3300048922 Bacteria 36561
229 Ga0496119_0003817 3300048922 Bacteria 15398
230 Ga0496119_0007345 3300048922 Bacteria 9962
231 Ga0496119_0015032 3300048922 Bacteria 5997
232 Ga0496120_0003162 3300048923 Bacteria 15361
233 Ga0496120_0003176 3300048923 Bacteria 15307
234 Ga0496120_0004887 3300048923 Bacteria 10917
235 Ga0496120_0005224 3300048923 Bacteria 10450
236 Ga0496120_0047750 3300048923 Bacteria 2467
237 Ga0496121_0032572 3300048924 Bacteria 4735
238 Ga0496121_0191931 3300048924 Bacteria 1464
239 Ga0496122_0000065 3300048925 Bacteria 235242
240 Ga0496122_0000270 3300048925 Bacteria 116104
241 Ga0496122_0007503 3300048925 Bacteria 12099
242 Ga0496122_0013308 3300048925 Bacteria 8064
243 Ga0496122_0035980 3300048925 Bacteria 4015
244 Ga0496123_0000006 3300048926 Bacteria 647258
245 Ga0496123_0000036 3300048926 Bacteria 265722
246 Ga0496123_0004241 3300048926 Bacteria 15265
247 Ga0496123_0007764 3300048926 Bacteria 10003
248 Ga0496123_0047886 3300048926 Bacteria 2883
249 Ga0496124_0006001 3300048927 Bacteria 13396
250 Ga0496124_0009964 3300048927 Bacteria 9709
251 Ga0496124_0029467 3300048927 Bacteria 4889
252 Ga0496124_0054402 3300048927 Bacteria 3388
253 Ga0496125_0001079 3300048928 Bacteria 41999
254 Ga0496125_0004231 3300048928 Bacteria 16721
255 Ga0496125_0006721 3300048928 Bacteria 12368
256 Ga0496125_0011166 3300048928 Bacteria 9005
257 Ga0496125_0020011 3300048928 Bacteria 6292
258 Ga0496125_0190761 3300048928 Bacteria 1353
259 Ga0496126_0003404 3300048929 Bacteria 20104
260 Ga0496126_0035997 3300048929 Bacteria 4633
261 Ga0501031_0003621 3300049568 Bacteria 9937
262 Ga0501031_0024983 3300049568 Bacteria 3896
263 Ga0501032_0008340 3300049569 Bacteria 7552
264 Ga0501033_0071222 3300049570 Bacteria 2554
265 Ga0501034_0002138 3300049571 Bacteria 24551
266 Ga0501034_0046573 3300049571 Bacteria 4381
267 Ga0501034_0121366 3300049571 Bacteria 2600
268 Ga0501037_0018969 3300049573 Bacteria 5069
269 Ga0501038_0006978 3300049574 Bacteria 10430
270 Ga0501038_0012596 3300049574 Bacteria 7729
271 Ga0501038_0019105 3300049574 Bacteria 6180
272 Ga0501039_0055953 3300049575 Bacteria 3056
273 Ga0501039_0068502 3300049575 Bacteria 2755
274 Ga0501043_0034509 3300049579 Bacteria 3978
275 Ga0501043_0085504 3300049579 Bacteria 2478
276 Ga0501043_0160866 3300049579 Bacteria 1754
277 Ga0501046_0036942 3300049580 Bacteria 3927
278 Ga0501047_0016164 3300049581 Bacteria 7119
279 Ga0501047_0066279 3300049581 Bacteria 3480
280 Ga0501048_0001448 3300049582 Bacteria 18003
281 Ga0501048_0009837 3300049582 Bacteria 7170
282 Ga0501070_0005544 3300049586 Bacteria 10761
283 Ga0501071_0137900 3300049587 Bacteria 1816
284 Ga0501072_0005152 3300049588 Bacteria 9943
285 Ga0501225_0024087 3300049705 Bacteria 1676
286 Ga0501229_000702 3300049706 Bacteria 3789
287 Ga0501035_0083819 3300049822 Bacteria 2812
288 Ga0501044_0146791 3300049823 Bacteria 2343
289 Ga0501045_0101195 3300049824 Bacteria 2133
290 nmdc:mga03683_25796_c1 3300050489 Bacteria 2312
291 nmdc:mga00v17_41408_c1 3300050491 Bacteria 2766
292 nmdc:mga00v17_78856_c1 3300050491 Bacteria 2053
293 nmdc:mga00v17_9389_c1 3300050491 Bacteria 5291
294 nmdc:mga07m45_13117_c1 3300050496 Bacteria 4388
295 nmdc:mga07m45_319_c2 3300050496 Bacteria 8809
296 Ga0495619_0096476 3300053085 Bacteria 2007
297 Ga0495619_0121368 3300053085 Bacteria 1792
298 Ga0500568_0000008 3300053139 Bacteria 281012
299 Ga0500577_0023766 3300053142 Bacteria 2052
300 Ga0500616_0000344 3300053153 Bacteria 66183
301 Ga0500616_0000633 3300053153 Bacteria 42693
302 Ga0500622_0015228 3300053156 Bacteria 4122
303 Ga0590075_003715 3300059424 Bacteria 3623
304 Ga0501082_0191263 3300060353 Bacteria 1780

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046501 Ga0495607_0093796 Ga0495607_0093796_347_1594 411
2 3300048908 Ga0496105_0269499 Ga0496105_0269499_109_1356 411
3 3300048917 Ga0496114_0154716 Ga0496114_0154716_20_1267 411
4 3300048928 Ga0496125_0190761 Ga0496125_0190761_26_1273 411
5 3300049579 Ga0501043_0085504 Ga0501043_0085504_1221_2468 411
6 3300050489 nmdc:mga03683_25796_c1 nmdc:mga03683_25796_c1_616_1926 421
7 3300005530 Ga0070679_100207749 Ga0070679_1002077491 423
8 3300049824 Ga0501045_0101195 Ga0501045_0101195_136_1440 423
9 3300060353 Ga0501082_0191263 Ga0501082_0191263_36_1340 423
10 3300036401 Ga0373937_0089494 Ga0373937_0089494_1284_2582 428
11 3300042876 Ga0451577_0008454 Ga0451577_0008454_5639_6964 428
12 3300044712 Ga0453684_0061987 Ga0453684_0061987_529_1854 428
13 3300048917 Ga0496114_0065221 Ga0496114_0065221_477_1805 428
14 3300053153 Ga0500616_0000344 Ga0500616_0000344_62052_63383 429
15 3300006051 Ga0075364_10014324 Ga0075364_100143244 430
16 iso_pu_bacteria 2643221585 2643935622 431
17 iso_pu_bacteria 2643221639 2644221084 431
18 iso_pu_bacteria 2643221646 2644259926 431
19 iso_pu_bacteria 2643221656 2644317405 431
20 iso_pu_bacteria 2643221544 2643746841 432
21 iso_pu_bacteria 2738541337 2739057586 432
22 3300050491 nmdc:mga00v17_41408_c1 nmdc:mga00v17_41408_c1_45_1391 433
23 3300028794 Ga0307515_10091925 Ga0307515_100919253 435
24 3300048920 Ga0496117_0081154 Ga0496117_0081154_15_1367 435
25 3300053142 Ga0500577_0023766 Ga0500577_0023766_200_1552 435
26 3300003794 Ga0055531_10000060 Ga0055531_1000006076 436
27 3300025298 Ga0209050_1001861 Ga0209050_100186112 436
28 3300025303 Ga0209051_1005347 Ga0209051_10053472 436
29 3300025304 Ga0209257_1000103 Ga0209257_1000103144 436
30 3300031548 Ga0307408_100000038 Ga0307408_10000003869 436
31 3300032005 Ga0307411_10000044 Ga0307411_1000004422 436
32 3300035114 Ga0373939_0000781 Ga0373939_0000781_6439_7755 436
33 3300035691 Ga0373931_0000513 Ga0373931_0000513_10348_11664 436
34 3300042120 Ga0450917_000264 Ga0450917_000264_2107_3426 436
35 3300042126 Ga0450888_000001 Ga0450888_000001_4617_5936 436
36 3300042127 Ga0450890_001846 Ga0450890_001846_315_1634 436
37 3300042129 Ga0450891_000126 Ga0450891_000126_4796_6115 436
38 3300042130 Ga0450892_000272 Ga0450892_000272_2158_3477 436
39 3300042144 Ga0450889_000218 Ga0450889_000218_3113_4432 436
40 3300042532 Ga0450893_0002610 Ga0450893_0002610_1367_2686 436
41 3300049705 Ga0501225_0024087 Ga0501225_0024087_319_1638 436
42 3300049706 Ga0501229_000702 Ga0501229_000702_1758_3077 436
43 3300050496 nmdc:mga07m45_319_c2 nmdc:mga07m45_319_c2_5428_6747 436
44 3300006237 Ga0097621_100003123 Ga0097621_1000031235 437
45 3300053153 Ga0500616_0000633 Ga0500616_0000633_15112_16434 437
46 3300005330 Ga0070690_100012297 Ga0070690_1000122974 438
47 3300005331 Ga0070670_100007980 Ga0070670_1000079802 438
48 3300005338 Ga0068868_100002993 Ga0068868_1000029933 438
49 3300005367 Ga0070667_100012835 Ga0070667_1000128352 438
50 3300005543 Ga0070672_100002134 Ga0070672_1000021346 438
51 3300005564 Ga0070664_100005092 Ga0070664_1000050922 438
52 3300005618 Ga0068864_100011318 Ga0068864_1000113183 438
53 3300005841 Ga0068863_100005916 Ga0068863_1000059163 438
54 3300025925 Ga0207650_10005125 Ga0207650_100051252 438
55 3300025940 Ga0207691_10002926 Ga0207691_100029266 438
56 3300025986 Ga0207658_10014282 Ga0207658_100142826 438
57 3300026023 Ga0207677_10006858 Ga0207677_100068587 438
58 3300026088 Ga0207641_10017883 Ga0207641_100178831 438
59 iso_pu_bacteria 2831864461 2831864710 438
60 3300013250 Ga0171462_1005 Ga0171462_1005423 439
61 3300020082 Ga0206353_11018149 Ga0206353_110181491 439
62 3300045051 Ga0451576_0011402 Ga0451576_0011402_6269_7603 439
63 3300014325 Ga0163163_10125393 Ga0163163_101253933 440
64 3300031911 Ga0307412_10151178 Ga0307412_101511781 440
65 3300049588 Ga0501072_0005152 Ga0501072_0005152_8226_9560 440
66 3300009098 Ga0105245_10177173 Ga0105245_101771732 441
67 3300009148 Ga0105243_10160839 Ga0105243_101608392 441
68 3300031249 Ga0265339_10000185 Ga0265339_1000018529 441
69 3300031344 Ga0265316_10000130 Ga0265316_100001309 441
70 3300031711 Ga0265314_10000003 Ga0265314_10000003524 441
71 3300036401 Ga0373937_0000955 Ga0373937_0000955_17753_19090 441
72 3300036401 Ga0373937_0050170 Ga0373937_0050170_2265_3602 441
73 3300046454 Ga0495592_0019151 Ga0495592_0019151_3775_5112 441
74 3300046559 Ga0495667_0002449 Ga0495667_0002449_7184_8521 441
75 3300046689 Ga0495613_0199404 Ga0495613_0199404_27_1364 441
76 3300047319 Ga0495674_0040684 Ga0495674_0040684_71_1408 441
77 3300048924 Ga0496121_0191931 Ga0496121_0191931_92_1432 441
78 3300053085 Ga0495619_0096476 Ga0495619_0096476_560_1897 441
79 3300004625 Ga0055543_1000673 Ga0055543_100067310 442
80 3300005262 Ga0065165_1000407 Ga0065165_100040743 442
81 3300005262 Ga0065165_1000455 Ga0065165_100045525 442
82 3300005344 Ga0070661_100011524 Ga0070661_1000115244 442
83 3300005355 Ga0070671_100053558 Ga0070671_1000535582 442
84 3300005364 Ga0070673_100052646 Ga0070673_1000526462 442
85 3300005435 Ga0070714_100053463 Ga0070714_1000534634 442
86 3300005436 Ga0070713_100049478 Ga0070713_1000494781 442
87 3300005616 Ga0068852_100096143 Ga0068852_1000961431 442
88 3300005937 Ga0081455_10069403 Ga0081455_100694032 442
89 3300006353 Ga0075370_10002796 Ga0075370_100027966 442
90 3300006944 Ga0099823_1000003 Ga0099823_100000316 442
91 3300009093 Ga0105240_10001299 Ga0105240_100012994 442
92 3300009177 Ga0105248_10003618 Ga0105248_1000361811 442
93 3300012497 Ga0157319_1000002 Ga0157319_1000002158 442
94 3300013296 Ga0157374_10118899 Ga0157374_101188993 442
95 3300013306 Ga0163162_10005753 Ga0163162_100057533 442
96 3300013307 Ga0157372_10037792 Ga0157372_100377926 442
97 3300013308 Ga0157375_10004826 Ga0157375_1000482610 442
98 3300014325 Ga0163163_10034475 Ga0163163_100344754 442
99 3300014325 Ga0163163_10214244 Ga0163163_102142441 442
100 3300020082 Ga0206353_10119690 Ga0206353_101196903 442
101 3300025261 Ga0209233_1000573 Ga0209233_10005737 442
102 3300025273 Ga0209673_1011878 Ga0209673_10118782 442
103 3300025298 Ga0209050_1007788 Ga0209050_10077884 442
104 3300025299 Ga0209256_1002110 Ga0209256_10021101 442
105 3300025303 Ga0209051_1005247 Ga0209051_10052474 442
106 3300025304 Ga0209257_1015070 Ga0209257_10150703 442
107 3300025913 Ga0207695_10000360 Ga0207695_1000036073 442
108 3300025949 Ga0207667_10054700 Ga0207667_100547004 442
109 3300026035 Ga0207703_10072380 Ga0207703_100723802 442
110 3300027296 Ga0209389_1000268 Ga0209389_100026819 442
111 3300027312 Ga0209371_1009467 Ga0209371_10094672 442
112 3300030500 Ga0268256_1010106 Ga0268256_10101063 442
113 3300031548 Ga0307408_100005248 Ga0307408_1000052486 442
114 3300035111 Ga0373923_0007887 Ga0373923_0007887_739_2082 442
115 3300036401 Ga0373937_0166658 Ga0373937_0166658_451_1794 442
116 3300044684 Ga0466966_0037200 Ga0466966_0037200_1673_3115 442
117 3300045049 Ga0466959_0020687 Ga0466959_0020687_3090_4532 442
118 3300045976 Ga0466967_0013875 Ga0466967_0013875_569_1960 442
119 3300046475 Ga0495639_0065968 Ga0495639_0065968_254_1594 442
120 3300047472 Ga0495686_0003102 Ga0495686_0003102_4533_5876 442
121 3300048922 Ga0496119_0000792 Ga0496119_0000792_36514_37956 442
122 3300048927 Ga0496124_0006001 Ga0496124_0006001_6128_7468 442
123 3300049570 Ga0501033_0071222 Ga0501033_0071222_729_2168 442
124 3300050496 nmdc:mga07m45_13117_c1 nmdc:mga07m45_13117_c1_2746_4086 442
125 3300053156 Ga0500622_0015228 Ga0500622_0015228_2190_3530 442
126 3300025941 Ga0207711_10038402 Ga0207711_100384022 443
127 3300031649 Ga0307514_10000420 Ga0307514_1000042015 443
128 3300042876 Ga0451577_0027343 Ga0451577_0027343_1531_2880 443
129 3300044673 Ga0453683_0001222 Ga0453683_0001222_1519_2868 443
130 3300044673 Ga0453683_0003391 Ga0453683_0003391_6056_7405 443
131 3300044712 Ga0453684_0000028 Ga0453684_0000028_294775_296124 443
132 3300044712 Ga0453684_0000067 Ga0453684_0000067_36760_38109 443
133 3300044712 Ga0453684_0020623 Ga0453684_0020623_3556_4905 443
134 3300044712 Ga0453684_0044161 Ga0453684_0044161_520_1869 443
135 3300045051 Ga0451576_0001910 Ga0451576_0001910_22873_24222 443
136 3300045051 Ga0451576_0029663 Ga0451576_0029663_3044_4393 443
137 3300045051 Ga0451576_0113933 Ga0451576_0113933_727_2076 443
138 3300047315 Ga0495581_0099886 Ga0495581_0099886_257_1609 443
139 3300048917 Ga0496114_0014471 Ga0496114_0014471_2755_4098 443
140 3300048928 Ga0496125_0001079 Ga0496125_0001079_6610_7953 443
141 3300049574 Ga0501038_0006978 Ga0501038_0006978_1372_2814 443
142 3300059424 Ga0590075_003715 Ga0590075_003715_178_1521 443
143 3300048917 Ga0496114_0259436 Ga0496114_0259436_46_1392 444
144 3300014968 Ga0157379_10010368 Ga0157379_100103683 445
145 3300037466 Ga0395898_0002891 Ga0395898_0002891_5395_6744 445
146 3300048923 Ga0496120_0047750 Ga0496120_0047750_115_1506 445
147 3300006353 Ga0075370_10002416 Ga0075370_100024167 446
148 3300049568 Ga0501031_0003621 Ga0501031_0003621_2947_4389 446
149 3300049569 Ga0501032_0008340 Ga0501032_0008340_309_1751 446
150 3300049571 Ga0501034_0046573 Ga0501034_0046573_1635_3077 446
151 3300049571 Ga0501034_0121366 Ga0501034_0121366_608_1960 446
152 3300049581 Ga0501047_0016164 Ga0501047_0016164_4291_5733 446
153 3300049582 Ga0501048_0001448 Ga0501048_0001448_3300_4742 446
154 3300049822 Ga0501035_0083819 Ga0501035_0083819_1188_2630 446
155 3300009551 Ga0105238_10004469 Ga0105238_100044691 447
156 3300025914 Ga0207671_10000256 Ga0207671_1000025616 447
157 3300028556 Ga0265337_1001689 Ga0265337_10016892 447
158 3300031240 Ga0265320_10000106 Ga0265320_1000010642 447
159 3300031711 Ga0265314_10007184 Ga0265314_100071847 447
160 3300044684 Ga0466966_0058411 Ga0466966_0058411_529_1968 449
161 3300044765 Ga0466970_0012719 Ga0466970_0012719_2516_3955 449
162 3300044842 Ga0466957_0095416 Ga0466957_0095416_364_1803 449
163 3300048904 Ga0496101_0027743 Ga0496101_0027743_543_1934 449
164 3300048914 Ga0496111_0068971 Ga0496111_0068971_684_2075 449
165 3300005614 Ga0068856_100030107 Ga0068856_1000301074 450
166 3300009093 Ga0105240_10099864 Ga0105240_100998643 450
167 3300009545 Ga0105237_10024634 Ga0105237_100246344 450
168 3300025914 Ga0207671_10048001 Ga0207671_100480013 450
169 3300026078 Ga0207702_10012664 Ga0207702_100126644 450
170 3300048908 Ga0496105_0097110 Ga0496105_0097110_24_1463 450
171 3300048914 Ga0496111_0172571 Ga0496111_0172571_10_1449 450
172 3300048917 Ga0496114_0027267 Ga0496114_0027267_2838_4262 450
173 3300046543 Ga0495645_0013163 Ga0495645_0013163_4383_5807 451
174 iso_pu_bacteria 2643221590 2643957821 451
175 iso_pu_bacteria 2643221604 2644034314 451
176 iso_pu_bacteria 2915358134 2915360498 451
177 3300025986 Ga0207658_10113972 Ga0207658_101139721 452
178 3300005354 Ga0070675_100085616 Ga0070675_1000856162 453
179 3300009174 Ga0105241_10051393 Ga0105241_100513933 454
180 3300005435 Ga0070714_100199702 Ga0070714_1001997022 455
181 3300005548 Ga0070665_100032017 Ga0070665_1000320172 455
182 3300025972 Ga0207668_10118490 Ga0207668_101184902 455
183 3300028379 Ga0268266_10011873 Ga0268266_100118735 455
184 3300037466 Ga0395898_0050017 Ga0395898_0050017_1299_2729 455
185 3300038443 Ga0395901_0029938 Ga0395901_0029938_450_1886 455
186 3300041997 Ga0439431_0003087 Ga0439431_0003087_1568_2998 455
187 3300042435 Ga0439434_0003954 Ga0439434_0003954_1475_2905 455
188 3300044683 Ga0466965_0011766 Ga0466965_0011766_2323_3753 455
189 3300044693 Ga0466961_0116460 Ga0466961_0116460_227_1657 455
190 3300044765 Ga0466970_0042407 Ga0466970_0042407_64_1503 455
191 3300045976 Ga0466967_0049378 Ga0466967_0049378_884_2314 455
192 3300048912 Ga0496109_0020717 Ga0496109_0020717_1015_2445 455
193 3300048913 Ga0496110_0079504 Ga0496110_0079504_1182_2612 455
194 3300049568 Ga0501031_0024983 Ga0501031_0024983_538_1968 455
195 3300049571 Ga0501034_0002138 Ga0501034_0002138_41_1486 455
196 3300049573 Ga0501037_0018969 Ga0501037_0018969_1160_2590 455
197 3300049575 Ga0501039_0055953 Ga0501039_0055953_73_1503 455
198 3300049579 Ga0501043_0034509 Ga0501043_0034509_211_1641 455
199 3300049579 Ga0501043_0160866 Ga0501043_0160866_281_1711 455
200 3300049580 Ga0501046_0036942 Ga0501046_0036942_156_1586 455
201 3300049581 Ga0501047_0066279 Ga0501047_0066279_201_1631 455
202 3300049582 Ga0501048_0009837 Ga0501048_0009837_3794_5224 455
203 3300049587 Ga0501071_0137900 Ga0501071_0137900_62_1480 455
204 3300049823 Ga0501044_0146791 Ga0501044_0146791_412_1842 455
205 3300005329 Ga0070683_100058397 Ga0070683_1000583973 456
206 3300009148 Ga0105243_10094337 Ga0105243_100943373 456
207 3300025940 Ga0207691_10189893 Ga0207691_101898932 456
208 3300025944 Ga0207661_10080911 Ga0207661_100809113 456
209 3300041452 Ga0451793_1508536 Ga0451793_1508536_2989_4419 456
210 3300044901 Ga0466960_0019238 Ga0466960_0019238_679_2112 456
211 3300044901 Ga0466960_0027888 Ga0466960_0027888_1065_2498 456
212 3300048903 Ga0496100_0075910 Ga0496100_0075910_156_1598 456
213 3300048904 Ga0496101_0083582 Ga0496101_0083582_885_2327 456
214 3300048905 Ga0496102_0038929 Ga0496102_0038929_1293_2735 456
215 3300048906 Ga0496103_0039155 Ga0496103_0039155_852_2294 456
216 3300048906 Ga0496103_0074178 Ga0496103_0074178_361_1794 456
217 3300048908 Ga0496105_0004428 Ga0496105_0004428_977_2419 456
218 3300048917 Ga0496114_0015297 Ga0496114_0015297_550_1992 456
219 3300048917 Ga0496114_0040327 Ga0496114_0040327_1302_2744 456
220 3300048917 Ga0496114_0044515 Ga0496114_0044515_65_1507 456
221 3300048918 Ga0496115_0050796 Ga0496115_0050796_39_1481 456
222 3300053085 Ga0495619_0121368 Ga0495619_0121368_65_1498 456
223 iso_pu_bacteria 8002811521 8002811670 456
224 3300009545 Ga0105237_10095874 Ga0105237_100958742 457
225 3300013306 Ga0163162_10143866 Ga0163162_101438661 457
226 3300013307 Ga0157372_10096773 Ga0157372_100967732 457
227 3300044842 Ga0466957_0112644 Ga0466957_0112644_56_1492 457
228 3300045976 Ga0466967_0037160 Ga0466967_0037160_998_2437 457
229 3300048903 Ga0496100_0032477 Ga0496100_0032477_650_2077 457
230 3300048905 Ga0496102_0130036 Ga0496102_0130036_276_1703 457
231 3300048906 Ga0496103_0023486 Ga0496103_0023486_415_1842 457
232 3300048910 Ga0496107_0016582 Ga0496107_0016582_3378_4805 457
233 3300048911 Ga0496108_0071633 Ga0496108_0071633_1212_2639 457
234 3300048914 Ga0496111_0046480 Ga0496111_0046480_1179_2606 457
235 iso_pu_bacteria 2852646457 2852649724 457
236 iso_pu_bacteria 2857733635 2857735522 457
237 3300025909 Ga0207705_10099224 Ga0207705_100992242 458
238 3300044693 Ga0466961_0018766 Ga0466961_0018766_2087_3526 458
239 3300044842 Ga0466957_0012909 Ga0466957_0012909_2764_4203 458
240 3300045836 Ga0466958_0003632 Ga0466958_0003632_1830_3269 458
241 3300048924 Ga0496121_0032572 Ga0496121_0032572_3269_4708 458
242 iso_pu_bacteria 2773857759 2774382505 458
243 iso_pu_bacteria 2844841374 2844843632 458
244 iso_pu_bacteria 2857720070 2857721516 458
245 iso_pu_bacteria 2906799679 2906802674 458
246 iso_pu_bacteria 2919055335 2919055624 458
247 iso_pu_bacteria 2919523602 2919525733 458
248 iso_pu_bacteria 2928090899 2928093368 458
249 iso_pu_bacteria 2928153084 2928153769 458
250 iso_pu_bacteria 2977251589 2977252698 458
251 iso_pu_bacteria 2984580707 2984582969 458
252 iso_pu_bacteria 8004212874 8004215378 458
253 3300013307 Ga0157372_10111924 Ga0157372_101119243 459
254 3300025931 Ga0207644_10193409 Ga0207644_101934091 459
255 iso_pu_bacteria 2808606447 2809225782 459
256 iso_pu_bacteria 2852632344 2852635343 459
257 3300025945 Ga0207679_10162617 Ga0207679_101626172 460
258 3300048917 Ga0496114_0246860 Ga0496114_0246860_99_1523 460
259 3300048923 Ga0496120_0003162 Ga0496120_0003162_9699_11144 460
260 iso_pu_bacteria 2643221649 2644278860 460
261 iso_pu_bacteria 2844852863 2844854011 460
262 iso_pu_bacteria 8056037122 8056040167 460
263 3300005366 Ga0070659_100154602 Ga0070659_1001546022 461
264 3300025904 Ga0207647_10030220 Ga0207647_100302202 461
265 3300044693 Ga0466961_0083665 Ga0466961_0083665_135_1589 461
266 3300044842 Ga0466957_0044328 Ga0466957_0044328_103_1557 461
267 3300048925 Ga0496122_0007503 Ga0496122_0007503_7560_8987 461
268 3300048926 Ga0496123_0004241 Ga0496123_0004241_642_2069 461
269 iso_pu_bacteria 2585428157 2588107587 461
270 iso_pu_bacteria 2643221542 2643735336 461
271 iso_pu_bacteria 2643221546 2643751722 461
272 iso_pu_bacteria 2643221553 2643784356 461
273 iso_pu_bacteria 2643221566 2643847401 461
274 iso_pu_bacteria 2643221575 2643887483 461
275 iso_pu_bacteria 2643221597 2643997394 461
276 iso_pu_bacteria 2643221630 2644172178 461
277 iso_pu_bacteria 2643221724 2644678478 461
278 iso_pu_bacteria 2728369380 2730227979 461
279 iso_pu_bacteria 2747842429 2747954200 461
280 iso_pu_bacteria 2757320536 2758225223 461
281 iso_pu_bacteria 2773857758 2774379372 461
282 iso_pu_bacteria 2773857763 2774397418 461
283 iso_pu_bacteria 2808606368 2808884415 461
284 iso_pu_bacteria 2811994872 2812325243 461
285 iso_pu_bacteria 2821268502 2821271896 461
286 iso_pu_bacteria 2833709550 2833712947 461
287 iso_pu_bacteria 2852643534 2852645357 461
288 iso_pu_bacteria 2852663356 2852667164 461
289 iso_pu_bacteria 2857723135 2857726174 461
290 iso_pu_bacteria 2870628048 2870628611 461
291 iso_pu_bacteria 2904509784 2904512358 461
292 iso_pu_bacteria 2908678064 2908679598 461
293 iso_pu_bacteria 2919069694 2919070247 461
294 iso_pu_bacteria 2919395869 2919397443 461
295 iso_pu_bacteria 2946033335 2946035587 461
296 iso_pu_bacteria 2946041624 2946042241 461
297 iso_pu_bacteria 2946080515 2946082978 461
298 iso_pu_bacteria 2974294766 2974295415 461
299 iso_pu_bacteria 2974324384 2974324782 461
300 iso_pu_bacteria 2977264416 2977265061 461
301 iso_pu_bacteria 8004182704 8004182849 461
302 iso_pu_bacteria 8016254467 8016255593 461
303 3300003578 Ga0006562J51391_1054739 Ga0006562J51391_105473915 462
304 3300003578 Ga0006562J51391_1054740 Ga0006562J51391_10547406 462
305 3300003752 Ga0055539_1000019 Ga0055539_1000019247 462
306 3300003756 Ga0055533_1000023 Ga0055533_100002378 462
307 3300025225 Ga0209566_100031 Ga0209566_10003178 462
308 3300025226 Ga0209674_100001 Ga0209674_1000012074 462
309 3300025230 Ga0209563_100001 Ga0209563_1000012074 462
310 3300025253 Ga0209677_100001 Ga0209677_1000012074 462
311 3300025272 Ga0209455_1002272 Ga0209455_10022726 462
312 3300044693 Ga0466961_0063099 Ga0466961_0063099_374_1807 462
313 3300044765 Ga0466970_0004423 Ga0466970_0004423_4613_6046 462
314 3300045049 Ga0466959_0001374 Ga0466959_0001374_12756_14189 462
315 3300053139 Ga0500568_0000008 Ga0500568_0000008_12217_13656 462
316 iso_pu_bacteria 2945968032 2945969849 464
317 3300003578 Ga0006562J51391_1054825 Ga0006562J51391_10548253 465
318 3300006038 Ga0075365_10016186 Ga0075365_100161865 465
319 3300006051 Ga0075364_10105488 Ga0075364_101054882 465
320 3300006178 Ga0075367_10022652 Ga0075367_100226523 465
321 3300006186 Ga0075369_10015804 Ga0075369_100158042 465
322 3300009148 Ga0105243_10007648 Ga0105243_100076483 465
323 3300025246 Ga0209646_1000030 Ga0209646_1000030305 465
324 3300025935 Ga0207709_10089267 Ga0207709_100892672 465
325 3300031901 Ga0307406_10000150 Ga0307406_1000015035 465
326 3300031901 Ga0307406_10124280 Ga0307406_101242801 465
327 3300032004 Ga0307414_10068738 Ga0307414_100687382 465
328 3300037466 Ga0395898_0263670 Ga0395898_0263670_37_1485 465
329 3300044765 Ga0466970_0016294 Ga0466970_0016294_236_1681 465
330 3300046453 Ga0495627_002021 Ga0495627_002021_4963_6408 465
331 3300048919 Ga0496116_0010953 Ga0496116_0010953_3632_5074 465
332 3300048920 Ga0496117_0000014 Ga0496117_0000014_163409_164851 465
333 3300048920 Ga0496117_0000978 Ga0496117_0000978_5315_6748 465
334 3300048920 Ga0496117_0004949 Ga0496117_0004949_9991_11433 465
335 3300048921 Ga0496118_0022428 Ga0496118_0022428_3670_5103 465
336 3300048921 Ga0496118_0047499 Ga0496118_0047499_1432_2874 465
337 3300048921 Ga0496118_0053202 Ga0496118_0053202_682_2124 465
338 3300048922 Ga0496119_0000988 Ga0496119_0000988_3041_4483 465
339 3300048922 Ga0496119_0003817 Ga0496119_0003817_7416_8858 465
340 3300048922 Ga0496119_0007345 Ga0496119_0007345_5088_6530 465
341 3300048922 Ga0496119_0015032 Ga0496119_0015032_3602_5044 465
342 3300048923 Ga0496120_0003176 Ga0496120_0003176_3851_5293 465
343 3300048923 Ga0496120_0004887 Ga0496120_0004887_5547_6989 465
344 3300048923 Ga0496120_0005224 Ga0496120_0005224_7774_9216 465
345 3300048925 Ga0496122_0000065 Ga0496122_0000065_143576_145018 465
346 3300048925 Ga0496122_0000270 Ga0496122_0000270_83047_84489 465
347 3300048925 Ga0496122_0013308 Ga0496122_0013308_4301_5743 465
348 3300048925 Ga0496122_0035980 Ga0496122_0035980_2520_3953 465
349 3300048926 Ga0496123_0000006 Ga0496123_0000006_333185_334627 465
350 3300048926 Ga0496123_0000036 Ga0496123_0000036_207671_209113 465
351 3300048926 Ga0496123_0007764 Ga0496123_0007764_3271_4713 465
352 3300048927 Ga0496124_0009964 Ga0496124_0009964_73_1515 465
353 3300048927 Ga0496124_0029467 Ga0496124_0029467_1094_2536 465
354 3300048927 Ga0496124_0054402 Ga0496124_0054402_1608_3050 465
355 3300048928 Ga0496125_0004231 Ga0496125_0004231_521_1963 465
356 3300048928 Ga0496125_0006721 Ga0496125_0006721_3824_5257 465
357 3300048928 Ga0496125_0011166 Ga0496125_0011166_302_1744 465
358 3300048928 Ga0496125_0020011 Ga0496125_0020011_1658_3100 465
359 3300048929 Ga0496126_0003404 Ga0496126_0003404_240_1673 465
360 3300048929 Ga0496126_0035997 Ga0496126_0035997_2393_3835 465
361 3300049574 Ga0501038_0012596 Ga0501038_0012596_1840_3270 465
362 3300049574 Ga0501038_0019105 Ga0501038_0019105_3145_4575 465
363 3300049575 Ga0501039_0068502 Ga0501039_0068502_685_2127 465
364 3300049586 Ga0501070_0005544 Ga0501070_0005544_5846_7288 465
365 3300050491 nmdc:mga00v17_78856_c1 nmdc:mga00v17_78856_c1_276_1718 465
366 3300050491 nmdc:mga00v17_9389_c1 nmdc:mga00v17_9389_c1_587_2020 465
367 iso_pu_bacteria 2643221635 2644199481 467
368 iso_pu_bacteria 2977228692 2977229816 471
369 iso_pu_bacteria 2977236895 2977238146 471
370 iso_pu_bacteria 2984542743 2984544071 471
371 iso_pu_bacteria 8045830549 8045833264 474
372 iso_pu_bacteria 2808606306 2808629457 475
373 3300001979 JGI24740J21852_10000242 JGI24740J21852_100002427 476
374 3300048926 Ga0496123_0047886 Ga0496123_0047886_1186_2694 476

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00764

Arginosuc_synth

Arginosuccinate synthase N-terminal HUP domain

40

204

0.87

PF20979

Arginosuc_syn_C

Arginosuccinate synthase C-terminal domain

218

441

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1k97-assembly1.cif.gz_A crystal structure of e. coli argininosuccinate synthetase in complex with aspartate and citrulline 0.9692 13 439
1kp3-assembly1.cif.gz_A crystal structure of e. coli argininosuccinate synthetase in complex with atp and citrulline 0.9679 13 439
1k92-assembly1.cif.gz_A crystal structure of uncomplexed e. coli argininosuccinate synthetase 0.9591 13 443
6e5y-assembly1.cif.gz_A 1.50 angstrom resolution crystal structure of argininosuccinate synthase from bordetella pertussis in complex with amp. 0.9547 13 443
1kp2-assembly1.cif.gz_A crystal structure of e. coli argininosuccinate synthetase in complex with atp 0.954 15 445
ID Description Score Start End Superfamily
5us8A02 Alpha Beta;Alpha-Beta Complex;Argininosuccinate synthetase, chain A, domain 2;Argininosuccinate synthetase, chain A, domain 2 0.9718 85 387 3.90.1260.10
5us8A02 Alpha Beta;Alpha-Beta Complex;Argininosuccinate synthetase, chain A, domain 2;Argininosuccinate synthetase, chain A, domain 2 0.9674 85 387 3.90.1260.10
1kp2A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9626 15 196 3.40.50.620
1kp2A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9444 15 196 3.40.50.620
af_A0A0P0Y1E8_15_149_3.90.1260.10 Alpha Beta;Alpha-Beta Complex;Argininosuccinate synthetase, chain A, domain 2;Argininosuccinate synthetase, chain A, domain 2 0.9356 282 414 3.90.1260.10
ID Description Score Start End GO Terms
AF-A0A4Z0PGL5-F1-model_v4 argininosuccinate synthase (EC 6.3.4.5) 0.9912 219 332 GO:0000050
GO:0000053
GO:0004055
GO:0005524
GO:0005737
GO:0006526
AF-A0A3C0YA10-F1-model_v4 argininosuccinate synthase (EC 6.3.4.5) 0.9892 242 382 GO:0000050
GO:0000053
GO:0004055
GO:0005524
GO:0005737
GO:0006526
AF-A0A522QXC5-F1-model_v4 argininosuccinate synthase (EC 6.3.4.5) 0.9828 12 398 GO:0000050
GO:0000053
GO:0004055
GO:0005524
GO:0005737
GO:0006526
AF-A0A3C0YA10-F1-model_v4 argininosuccinate synthase (EC 6.3.4.5) 0.9823 242 382 GO:0000050
GO:0000053
GO:0004055
GO:0005524
GO:0005737
GO:0006526
AF-A0A3C1D5P0-F1-model_v4 argininosuccinate synthase (EC 6.3.4.5) 0.9817 12 344 GO:0000050
GO:0000053
GO:0004055
GO:0005524
GO:0005737
GO:0006526

Feature Viewer

pLDDT pTM Quality
85.55 0.83 High
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Predicted Structure (AlphaFold2)

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