F426048

General Info

Members Datasets Scaffolds Average Seq Length
372 251 330 387

Family's Representative Sequence

Representative Sequence 3300013100|Ga0157373_10056609|Ga0157373_100566092
Length 428
Sequence MVDPVVSGMAAPTTTETAGTARRDLARASNSERMERRSHDQSLPVVIVGAGLASAVIAQRLSTVRDAPQIVILESTNTPFGEHTWSFHKADLQPSSLAWIAPLIAHEWDGQSVRFGSYERHLPSGYASLTSASVSEAIGRLPNVSLSKNTEATALSAAEVTFANGSTQAASCVIDCRGYRPSASMVLGYQKFVGLEVELSEPHGLPHPVIMDATVDQLDGYRFVYLLPMSPTRVLIEDTRYSEGADLDDAVISQDIHAYAARQGWNIADAVRCENGVLPIVLAHDFERFWSELPADIPHAGLRAGLFHPTTGYSLPDAVHVADLIGENWPIGSAALARAIRGYAARQHKKQGFYRLLNRMLFLAAEPDRRHLVLERFYKLPTPLIERFYAGRTTMTDILRILTGKPPVPIYRALACLSEAKLFENGSS

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
3 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
4 2517487022 Sinorhizobium medicae WSM4191 Isolate Nodule
5 2599185299 Pantoea ananatis NFR11 Isolate Rhizoplane
6 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
7 2648501693 Pantoea ananatis B1-9 Isolate Rhizosphere
8 2684622997 Pantoea ananatis NFIX48 Isolate Rhizoplane
9 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
10 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
11 2802428859 Sinorhizobium medicae SF3.41 Isolate Nodule
12 2808606414 Pantoea sp. SJZ147 Isolate Rhizosphere
13 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
14 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
15 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
16 2847797336 Pantoea ananatis NN08200 Isolate Unclassified
17 2857553236 Duganella sp. R-74557 Isolate Unclassified
18 2865014394 Pantoea sp. R-71966 Isolate Unclassified
19 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
20 2885427238 Sphingomonas mesophila SYSUP0001 Isolate Stem Tuber
21 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
22 2904424332 Duganella sp. 1411 Isolate Rhizosphere
23 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
24 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
25 2919476304 Duganella sp. 3397 Isolate Unclassified
26 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
27 2945951305 Pantoea agglomerans W2I1 Isolate Rhizosphere
28 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
29 2970026789 Sinorhizobium medicae USDA1611 Isolate Nodule
30 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
31 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
32 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
33 2984494565 Pantoea ananatis SORGH_AS197 Isolate Aerial Root
34 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
35 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
36 2990261002 Pantoea ananatis SORGH_AS213 Isolate Aerial Root
37 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
38 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
39 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
40 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
41 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
42 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
43 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
44 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
45 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
46 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
47 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
48 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
49 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
50 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
51 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
52 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
53 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
54 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
55 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
56 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
57 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
58 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
59 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
60 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
61 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
62 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
63 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
64 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
65 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
66 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
67 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
68 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
69 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
70 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
71 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
72 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
73 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
74 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
75 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
76 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
77 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
78 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
79 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
80 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
81 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
82 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
83 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
84 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
85 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
86 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
89 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
90 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
91 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
92 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
93 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
94 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
95 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
96 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
97 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
98 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
99 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
100 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
101 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
102 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
103 3300022739 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules Metagenome Nodule
104 3300022740 Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules Metagenome Nodule
105 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
106 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
107 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
108 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
109 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
111 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
116 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
118 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
148 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
149 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
150 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
151 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
153 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
154 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
155 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
156 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
157 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
158 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
159 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
160 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
161 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
162 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
163 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
164 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
165 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
166 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
167 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
168 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
169 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
170 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
171 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
172 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
173 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
174 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
175 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
176 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
177 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
178 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
179 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
180 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
181 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
182 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
183 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
184 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
185 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
186 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
187 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
188 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
189 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
190 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
191 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
192 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
193 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
194 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
195 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
196 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
197 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
198 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
199 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
200 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
201 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
202 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
203 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
204 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
205 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
206 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
207 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
208 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
209 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
210 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
211 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
212 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
213 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
214 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
215 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
216 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
217 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
218 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
219 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
220 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
221 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
222 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
223 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
224 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
225 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
226 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
227 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
228 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
229 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
230 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
231 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
232 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
233 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
234 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
235 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
236 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
237 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
238 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
239 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
240 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
241 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
242 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
243 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
244 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
245 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
246 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
247 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
248 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
249 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
250 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified
251 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.17
Metatranscriptomes 0.54
Isolates 11.29

Biome Distribution

Category Percentage (%)
Aerial Root 1.61
Bulb 0
Endosphere 17.47
Nodule 2.15
Rhizoplane 4.57
Rhizosphere 58.33
Stem 0
Stem Tuber 0.27
Unclassified 15.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000079 3300001904 Bacteria 16022
2 JGI24752J21851_1000253 3300001976 Bacteria 7386
3 JGI24740J21852_10014968 3300001979 Bacteria 2845
4 JGI24739J22299_10003256 3300001989 Bacteria 6190
5 JGI24735J21928_10009564 3300002067 Bacteria 3107
6 JGI24738J21930_10001766 3300002075 Bacteria 5892
7 JGI24034J26672_10000024 3300002239 Bacteria 114754
8 JGI25162J39368_1002584 3300002737 Bacteria 6818
9 JGI25150J39212_1000367 3300002774 Bacteria 21803
10 JGI25165J46597_1000010 3300003214 Bacteria 442113
11 JGI25153J46596_10000125 3300003215 Bacteria 86065
12 JGI25153J46596_10009247 3300003215 Bacteria 4610
13 Ga0006562J51391_1070523 3300003578 Bacteria 1443
14 Ga0055526_1005294 3300003771 Bacteria 7471
15 Ga0055537_1002195 3300003773 Bacteria 6800
16 Ga0055524_1000210 3300003775 Bacteria 62927
17 Ga0055530_10000117 3300003791 Bacteria 69120
18 Ga0055530_10002624 3300003791 Bacteria 11287
19 Ga0055530_10011240 3300003791 Bacteria 3232
20 Ga0055540_1001490 3300003792 Bacteria 13910
21 Ga0055531_10000180 3300003794 Bacteria 71821
22 Ga0055531_10003511 3300003794 Bacteria 9966
23 Ga0055531_10004733 3300003794 Bacteria 8141
24 Ga0055531_10004873 3300003794 Bacteria 7998
25 Ga0058692_1000036 3300003856 Bacteria 152148
26 Ga0065165_1001363 3300005262 Bacteria 26928
27 Ga0065165_1002232 3300005262 Bacteria 17225
28 Ga0065165_1012975 3300005262 Bacteria 3346
29 Ga0065707_10082279 3300005295 Bacteria 17547
30 Ga0070670_100000215 3300005331 Bacteria 53387
31 Ga0070668_100008540 3300005347 Bacteria 7605
32 Ga0070669_100125277 3300005353 Bacteria 1965
33 Ga0070667_100000311 3300005367 Bacteria 54491
34 Ga0070684_100318037 3300005535 Bacteria 1430
35 Ga0068853_100196352 3300005539 Bacteria 1835
36 Ga0068859_100001427 3300005617 Bacteria 24232
37 Ga0068864_100000080 3300005618 Bacteria 102508
38 Ga0068864_100000218 3300005618 Bacteria 51909
39 Ga0068861_100000269 3300005719 Bacteria 29033
40 Ga0068851_10098933 3300005834 Bacteria 1545
41 Ga0068863_100000010 3300005841 Bacteria 237758
42 Ga0068863_100000087 3300005841 Bacteria 102508
43 Ga0068858_100000352 3300005842 Bacteria 48455
44 Ga0068858_100003280 3300005842 Bacteria 16117
45 Ga0068862_100000101 3300005844 Bacteria 102508
46 Ga0081455_10002849 3300005937 Bacteria 20368
47 Ga0075364_10142004 3300006051 Bacteria 1615
48 Ga0075367_10009616 3300006178 Bacteria 5060
49 Ga0097620_100001427 3300006931 Bacteria 24232
50 Ga0079104_1000588 3300006946 Bacteria 36329
51 Ga0079104_1004271 3300006946 Bacteria 6206
52 Ga0105251_10000248 3300009011 Bacteria 54567
53 Ga0105251_10000628 3300009011 Bacteria 32429
54 Ga0105251_10006071 3300009011 Bacteria 7784
55 Ga0105251_10006581 3300009011 Bacteria 7368
56 Ga0105251_10018342 3300009011 Bacteria 3723
57 Ga0105244_10000269 3300009036 Bacteria 52299
58 Ga0105244_10000574 3300009036 Bacteria 32987
59 Ga0105244_10009073 3300009036 Bacteria 6146
60 Ga0111539_10352494 3300009094 Bacteria 1713
61 Ga0105245_10000318 3300009098 Bacteria 45618
62 Ga0105247_10001581 3300009101 Bacteria 16166
63 Ga0105243_10037467 3300009148 Bacteria 3770
64 Ga0105248_10000029 3300009177 Bacteria 223366
65 Ga0105248_10001383 3300009177 Bacteria 27020
66 Ga0105248_10002419 3300009177 Bacteria 20711
67 Ga0105248_10008190 3300009177 Bacteria 11482
68 Ga0105238_10163723 3300009551 Bacteria 2200
69 Ga0105249_10000024 3300009553 Bacteria 232947
70 Ga0105239_10000271 3300010375 Bacteria 76812
71 Ga0105239_10483109 3300010375 Bacteria 1407
72 Ga0157373_10040835 3300013100 Bacteria 3319
73 Ga0157373_10056609 3300013100 Bacteria 2783
74 Ga0157371_10000010 3300013102 Bacteria 384921
75 Ga0157371_10000623 3300013102 Bacteria 42132
76 Ga0157371_10009935 3300013102 Bacteria 7449
77 Ga0157370_10001745 3300013104 Bacteria 26767
78 Ga0157370_10048690 3300013104 Bacteria 4060
79 Ga0157369_10000874 3300013105 Bacteria 38453
80 Ga0157369_10003882 3300013105 Bacteria 17731
81 Ga0157369_10086724 3300013105 Bacteria 3343
82 Ga0157369_10087455 3300013105 Bacteria 3327
83 Ga0157378_10013448 3300013297 Bacteria 7156
84 Ga0163162_10002088 3300013306 Bacteria 18765
85 Ga0163162_10019317 3300013306 Bacteria 6682
86 Ga0163162_10075900 3300013306 Bacteria 3422
87 Ga0163162_10084010 3300013306 Bacteria 3259
88 Ga0163162_10198122 3300013306 Bacteria 2137
89 Ga0157372_10005177 3300013307 Bacteria 13870
90 Ga0157372_10078912 3300013307 Bacteria 3721
91 Ga0163163_10285680 3300014325 Bacteria 1702
92 Ga0182008_10023665 3300014497 Bacteria 3133
93 Ga0182006_1000116 3300015261 Bacteria 86100
94 Ga0182006_1008611 3300015261 Bacteria 4622
95 Ga0182006_1020618 3300015261 Bacteria 2759
96 Ga0182006_1046467 3300015261 Bacteria 1686
97 Ga0182007_10036975 3300015262 Bacteria 1641
98 Ga0182005_1000003 3300015265 Bacteria 683269
99 Ga0163161_10053011 3300017792 Bacteria 2941
100 Ga0206356_11479263 3300020070 Bacteria 2976
101 Ga0213876_10000168 3300021384 Bacteria 69226
102 Ga0228711_1013421 3300022739 Bacteria 9633
103 Ga0228710_1002821 3300022740 Bacteria 27611
104 Ga0209437_100032 3300025233 Bacteria 520075
105 Ga0209437_104978 3300025233 Bacteria 2296
106 Ga0207425_1000005 3300025245 Bacteria 900502
107 Ga0207425_1003144 3300025245 Bacteria 5414
108 Ga0209129_1001418 3300025258 Bacteria 13384
109 Ga0209233_1000044 3300025261 Bacteria 489783
110 Ga0209565_1000029 3300025263 Bacteria 340335
111 Ga0209565_1000052 3300025263 Bacteria 212056
112 Ga0209565_1021259 3300025263 Bacteria 1359
113 Ga0209673_1002360 3300025273 Bacteria 13284
114 Ga0209675_1003172 3300025291 Bacteria 7986
115 Ga0209676_1014024 3300025292 Bacteria 3043
116 Ga0209025_1000855 3300025294 Bacteria 48253
117 Ga0209564_1000783 3300025295 Bacteria 44071
118 Ga0209758_1000002 3300025297 Bacteria 1400310
119 Ga0209758_1001653 3300025297 Bacteria 25273
120 Ga0209050_1000001 3300025298 Bacteria 3563507
121 Ga0209050_1000131 3300025298 Bacteria 186028
122 Ga0209050_1001214 3300025298 Bacteria 30169
123 Ga0209050_1005263 3300025298 Bacteria 8240
124 Ga0209050_1009212 3300025298 Bacteria 5097
125 Ga0209050_1016658 3300025298 Bacteria 2989
126 Ga0209256_1000008 3300025299 Bacteria 975723
127 Ga0209051_1000297 3300025303 Bacteria 79062
128 Ga0209257_1000028 3300025304 Bacteria 699493
129 Ga0209257_1001308 3300025304 Bacteria 30326
130 Ga0209257_1001601 3300025304 Bacteria 25905
131 Ga0209257_1005585 3300025304 Bacteria 8732
132 Ga0207696_1005318 3300025711 Bacteria 5359
133 Ga0207655_1004001 3300025728 Bacteria 10656
134 Ga0207713_1000011 3300025735 Bacteria 507224
135 Ga0207713_1009600 3300025735 Bacteria 5436
136 Ga0207710_10001917 3300025900 Bacteria 9961
137 Ga0207647_10000283 3300025904 Bacteria 41512
138 Ga0207654_10035442 3300025911 Bacteria 2781
139 Ga0207695_10005114 3300025913 Bacteria 17565
140 Ga0207695_10005579 3300025913 Bacteria 16618
141 Ga0207695_10030277 3300025913 Bacteria 5961
142 Ga0207671_10001194 3300025914 Bacteria 30831
143 Ga0207657_10040753 3300025919 Bacteria 4112
144 Ga0207652_10164553 3300025921 Bacteria 1989
145 Ga0207694_10030138 3300025924 Bacteria 4142
146 Ga0207694_10036589 3300025924 Bacteria 3768
147 Ga0207694_10089855 3300025924 Bacteria 2423
148 Ga0207650_10000261 3300025925 Bacteria 56610
149 Ga0207687_10000398 3300025927 Bacteria 29475
150 Ga0207709_10019526 3300025935 Bacteria 3813
151 Ga0207711_10000004 3300025941 Bacteria 870636
152 Ga0207711_10000504 3300025941 Bacteria 40316
153 Ga0207711_10003539 3300025941 Bacteria 13523
154 Ga0207711_10012342 3300025941 Bacteria 7100
155 Ga0207667_10005172 3300025949 Bacteria 15937
156 Ga0207712_10000034 3300025961 Bacteria 202320
157 Ga0207658_10000239 3300025986 Bacteria 57662
158 Ga0207703_10000901 3300026035 Bacteria 29064
159 Ga0207703_10001110 3300026035 Bacteria 25489
160 Ga0207678_10028167 3300026067 Bacteria 4906
161 Ga0207702_10001125 3300026078 Bacteria 27311
162 Ga0207641_10000010 3300026088 Bacteria 402193
163 Ga0207641_10000171 3300026088 Bacteria 90550
164 Ga0207648_10171086 3300026089 Bacteria 1920
165 Ga0207676_10000036 3300026095 Bacteria 198447
166 Ga0207676_10000169 3300026095 Bacteria 57208
167 Ga0207674_10007710 3300026116 Bacteria 12527
168 Ga0207674_10061782 3300026116 Bacteria 3784
169 Ga0207675_100000856 3300026118 Bacteria 30350
170 Ga0207698_10205195 3300026142 Bacteria 1768
171 Ga0209281_1000564 3300027111 Bacteria 44570
172 Ga0209371_1000034 3300027312 Bacteria 379021
173 Ga0209371_1000468 3300027312 Bacteria 39766
174 Ga0209371_1002963 3300027312 Bacteria 8827
175 Ga0209371_1004424 3300027312 Bacteria 6135
176 Ga0209996_1001472 3300027395 Bacteria 2846
177 Ga0209974_10007133 3300027876 Bacteria 3862
178 Ga0268265_10000059 3300028380 Bacteria 152531
179 Ga0307517_10013707 3300028786 Bacteria 10981
180 Ga0307517_10204074 3300028786 Bacteria 1230
181 Ga0265338_10006570 3300028800 Bacteria 14757
182 Ga0265338_10043183 3300028800 Unclassified 4185
183 Ga0268256_1000043 3300030500 Bacteria 331360
184 Ga0268256_1000396 3300030500 Bacteria 39766
185 Ga0268256_1003824 3300030500 Bacteria 6566
186 Ga0268256_1018684 3300030500 Bacteria 1916
187 Ga0307513_10075754 3300031456 Bacteria 3492
188 Ga0307513_10083929 3300031456 Bacteria 3274
189 Ga0307408_100053217 3300031548 Bacteria 2922
190 Ga0307508_10000011 3300031616 Bacteria 248001
191 Ga0265314_10100136 3300031711 Bacteria 1865
192 Ga0316576_10075524 3300031727 Bacteria 2493
193 Ga0307516_10211070 3300031730 Bacteria 1656
194 Ga0307405_10172882 3300031731 Bacteria 1543
195 Ga0307413_10173740 3300031824 Bacteria 1528
196 Ga0307410_10063373 3300031852 Bacteria 2536
197 Ga0307412_10006280 3300031911 Bacteria 6710
198 Ga0307412_10032530 3300031911 Bacteria 3306
199 Ga0307412_10059577 3300031911 Bacteria 2559
200 Ga0307409_100081641 3300031995 Bacteria 2614
201 Ga0307415_100020465 3300032126 Bacteria 4041
202 Ga0307510_10000535 3300033180 Bacteria 37905
203 Ga0373943_0119568 3300035170 Bacteria 1399
204 Ga0436365_1053358 3300039437 Bacteria 69298
205 Ga0436365_1206395 3300039437 Bacteria 1385
206 Ga0436363_0559446 3300039450 Bacteria 1979
207 Ga0439447_008023 3300041407 Bacteria 3299
208 Ga0439466_0000020 3300041411 Bacteria 97570
209 Ga0439465_0036108 3300041413 Bacteria 1586
210 Ga0451853_0087131 3300041512 Bacteria 1427
211 Ga0439431_0000227 3300041997 Bacteria 11359
212 Ga0439431_0007811 3300041997 Bacteria 2391
213 Ga0439442_008085 3300042002 Bacteria 2125
214 Ga0439445_0001121 3300042004 Bacteria 5728
215 Ga0439452_000021 3300042010 Bacteria 274062
216 Ga0439452_007288 3300042010 Bacteria 3396
217 Ga0439457_010986 3300042014 Bacteria 2068
218 Ga0450907_000307 3300042146 Bacteria 16447
219 Ga0439446_0015542 3300042156 Bacteria 2113
220 Ga0439434_0000547 3300042435 Bacteria 10772
221 Ga0439464_0001423 3300042439 Bacteria 5626
222 Ga0466982_0078539 3300044672 Bacteria 2042
223 Ga0495590_0019954 3300046457 Bacteria 2383
224 Ga0495638_0000741 3300046460 Bacteria 35061
225 Ga0495650_0001694 3300046471 Bacteria 20314
226 Ga0495596_0005072 3300046500 Bacteria 6286
227 Ga0495596_0006774 3300046500 Bacteria 5233
228 Ga0495583_0004057 3300046506 Bacteria 10761
229 Ga0495583_0015040 3300046506 Bacteria 4230
230 Ga0495610_0006461 3300046512 Bacteria 8058
231 Ga0495631_0001660 3300046518 Bacteria 13235
232 Ga0495637_0000156 3300046520 Bacteria 52688
233 Ga0495637_0025490 3300046520 Bacteria 2663
234 Ga0495643_0047618 3300046522 Bacteria 2321
235 Ga0495648_0006694 3300046524 Bacteria 9331
236 Ga0495648_0011974 3300046524 Bacteria 6502
237 Ga0495648_0058466 3300046524 Bacteria 2305
238 Ga0495663_0007222 3300046525 Bacteria 3065
239 Ga0495654_0000015 3300046530 Bacteria 307873
240 Ga0495654_0001867 3300046530 Bacteria 14027
241 Ga0495597_0001604 3300046542 Bacteria 15872
242 Ga0495668_0001176 3300046616 Bacteria 26639
243 Ga0495668_0002552 3300046616 Bacteria 14809
244 Ga0495625_0000094 3300046660 Bacteria 144517
245 Ga0495625_0014585 3300046660 Bacteria 6263
246 Ga0495661_0000497 3300046665 Bacteria 40919
247 Ga0495670_0000016 3300046691 Bacteria 128045
248 Ga0495670_0009975 3300046691 Bacteria 4669
249 Ga0495671_0029787 3300046692 Bacteria 2800
250 Ga0495589_0000266 3300046794 Bacteria 42658
251 Ga0495660_0029989 3300046810 Bacteria 3065
252 Ga0495660_0040815 3300046810 Bacteria 2571
253 Ga0495660_0045576 3300046810 Bacteria 2406
254 Ga0495672_0000037 3300047320 Bacteria 278588
255 Ga0495687_000637 3300047443 Bacteria 40184
256 Ga0495677_0070716 3300047445 Bacteria 1300
257 Ga0495679_001688 3300047446 Bacteria 12250
258 Ga0495679_002421 3300047446 Bacteria 9520
259 Ga0495686_0000100 3300047472 Bacteria 180492
260 Ga0495686_0000770 3300047472 Bacteria 42285
261 Ga0495686_0018295 3300047472 Bacteria 4706
262 Ga0495626_0001008 3300048091 Bacteria 24189
263 Ga0496100_0093171 3300048903 Bacteria 2060
264 Ga0496101_0002329 3300048904 Bacteria 11634
265 Ga0496101_0043257 3300048904 Bacteria 3219
266 Ga0496101_0058063 3300048904 Bacteria 2800
267 Ga0496102_0001101 3300048905 Bacteria 24913
268 Ga0496103_0002834 3300048906 Bacteria 10786
269 Ga0496103_0188626 3300048906 Bacteria 1325
270 Ga0496105_0004155 3300048908 Bacteria 10862
271 Ga0496109_0007449 3300048912 Bacteria 9267
272 Ga0496110_0001412 3300048913 Bacteria 17364
273 Ga0496110_0015849 3300048913 Bacteria 6285
274 Ga0496113_0001197 3300048916 Bacteria 14215
275 Ga0496114_0087665 3300048917 Bacteria 2639
276 Ga0496115_0000956 3300048918 Bacteria 20966
277 Ga0496116_0002526 3300048919 Bacteria 19155
278 Ga0496116_0027266 3300048919 Bacteria 4161
279 Ga0496116_0077891 3300048919 Bacteria 2069
280 Ga0496117_0000017 3300048920 Bacteria 490421
281 Ga0496117_0000153 3300048920 Bacteria 147065
282 Ga0496117_0001144 3300048920 Bacteria 39913
283 Ga0496117_0007410 3300048920 Bacteria 10730
284 Ga0496118_0000018 3300048921 Bacteria 490421
285 Ga0496118_0000335 3300048921 Bacteria 80253
286 Ga0496119_0000005 3300048922 Bacteria 529799
287 Ga0496119_0000084 3300048922 Bacteria 137831
288 Ga0496119_0056541 3300048922 Bacteria 2377
289 Ga0496120_0000005 3300048923 Bacteria 529797
290 Ga0496120_0000010 3300048923 Bacteria 385791
291 Ga0496121_0000055 3300048924 Bacteria 304572
292 Ga0496121_0000163 3300048924 Bacteria 145648
293 Ga0496121_0000949 3300048924 Bacteria 52413
294 Ga0496121_0005688 3300048924 Bacteria 15848
295 Ga0496122_0001184 3300048925 Bacteria 44630
296 Ga0496122_0004284 3300048925 Bacteria 17885
297 Ga0496122_0005691 3300048925 Bacteria 14708
298 Ga0496123_0000751 3300048926 Bacteria 52507
299 Ga0496123_0001323 3300048926 Bacteria 34986
300 Ga0496123_0001715 3300048926 Bacteria 29234
301 Ga0496124_0000158 3300048927 Bacteria 137433
302 Ga0496124_0004758 3300048927 Bacteria 15633
303 Ga0496124_0072335 3300048927 Bacteria 2856
304 Ga0496124_0136674 3300048927 Bacteria 1940
305 Ga0496125_0000991 3300048928 Bacteria 44272
306 Ga0496125_0004633 3300048928 Bacteria 15708
307 Ga0496126_0023470 3300048929 Bacteria 5977
308 Ga0496126_0033883 3300048929 Bacteria 4803
309 Ga0495678_000001 3300049459 Bacteria 1060340
310 Ga0495678_000368 3300049459 Bacteria 46143
311 Ga0495678_024124 3300049459 Bacteria 2632
312 Ga0501040_0000494 3300049576 Bacteria 23576
313 Ga0501249_011748 3300049679 Bacteria 1843
314 Ga0501269_000029 3300049766 Bacteria 46771
315 nmdc:mga03683_37821_c1 3300050489 Bacteria 1968
316 nmdc:mga00v17_1830_c1 3300050491 Bacteria 1675
317 Ga0500643_000467 3300053087 Bacteria 29824
318 Ga0500643_007507 3300053087 Bacteria 4382
319 Ga0500556_0010302 3300053104 Bacteria 2741
320 Ga0500592_000174 3300053116 Bacteria 12704
321 Ga0500658_0001451 3300053134 Bacteria 9472
322 Ga0500658_0020744 3300053134 Bacteria 2483
323 Ga0500559_0017036 3300053136 Bacteria 3069
324 Ga0500559_0049808 3300053136 Bacteria 1846
325 Ga0500559_0087199 3300053136 Bacteria 1425
326 Ga0500573_0000290 3300053140 Bacteria 21357
327 Ga0500604_0000882 3300053151 Bacteria 8287
328 Ga0500616_0038736 3300053153 Bacteria 2573
329 Ga0500627_0002029 3300053158 Bacteria 5848
330 Ga0500645_002914 3300053730 Bacteria 7293

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046810 Ga0495660_0040815 Ga0495660_0040815_378_1553 328
2 3300025914 Ga0207671_10001194 Ga0207671_1000119424 341
3 3300028786 Ga0307517_10013707 Ga0307517_100137079 355
4 3300041512 Ga0451853_0087131 Ga0451853_0087131_290_1381 356
5 3300001976 JGI24752J21851_1000253 JGI24752J21851_10002533 367
6 3300005331 Ga0070670_100000215 Ga0070670_10000021524 367
7 3300005367 Ga0070667_100000311 Ga0070667_10000031124 367
8 3300014325 Ga0163163_10285680 Ga0163163_102856801 367
9 3300025900 Ga0207710_10001917 Ga0207710_100019173 367
10 3300025941 Ga0207711_10000004 Ga0207711_10000004385 367
11 3300025961 Ga0207712_10000034 Ga0207712_10000034113 367
12 3300026088 Ga0207641_10000010 Ga0207641_1000001028 367
13 3300026095 Ga0207676_10000036 Ga0207676_1000003671 367
14 3300028380 Ga0268265_10000059 Ga0268265_1000005924 367
15 3300048904 Ga0496101_0043257 Ga0496101_0043257_90_1196 367
16 3300048091 Ga0495626_0001008 Ga0495626_0001008_16480_17655 370
17 3300009094 Ga0111539_10352494 Ga0111539_103524941 371
18 3300005617 Ga0068859_100001427 Ga0068859_10000142711 374
19 3300006931 Ga0097620_100001427 Ga0097620_10000142711 374
20 3300009177 Ga0105248_10002419 Ga0105248_100024195 374
21 3300025941 Ga0207711_10000504 Ga0207711_1000050431 374
22 iso_pu_bacteria 2599185299 2599929050 374
23 iso_pu_bacteria 2648501693 2650899468 374
24 iso_pu_bacteria 2684622997 2686355537 374
25 iso_pu_bacteria 2808606414 2809126164 374
26 iso_pu_bacteria 2847797336 2847802428 374
27 iso_pu_bacteria 2984494565 2984494817 374
28 iso_pu_bacteria 2990261002 2990264909 374
29 3300009101 Ga0105247_10001581 Ga0105247_100015818 375
30 3300009177 Ga0105248_10000029 Ga0105248_10000029121 375
31 3300009553 Ga0105249_10000024 Ga0105249_10000024113 375
32 3300013306 Ga0163162_10019317 Ga0163162_100193175 375
33 3300048922 Ga0496119_0000005 Ga0496119_0000005_259142_260281 375
34 3300049679 Ga0501249_011748 Ga0501249_011748_299_1474 375
35 3300049766 Ga0501269_000029 Ga0501269_000029_26117_27292 375
36 3300048913 Ga0496110_0015849 Ga0496110_0015849_4052_5218 376
37 iso_pu_bacteria 2885427238 2885429450 377
38 iso_pu_bacteria 2928972540 2928975403 377
39 3300003791 Ga0055530_10002624 Ga0055530_1000262412 378
40 3300003792 Ga0055540_1001490 Ga0055540_10014905 378
41 3300003794 Ga0055531_10003511 Ga0055531_1000351112 378
42 3300005262 Ga0065165_1012975 Ga0065165_10129752 378
43 3300009011 Ga0105251_10006581 Ga0105251_100065813 378
44 3300009036 Ga0105244_10000574 Ga0105244_1000057410 378
45 3300013100 Ga0157373_10040835 Ga0157373_100408353 378
46 3300013102 Ga0157371_10000623 Ga0157371_1000062326 378
47 3300013104 Ga0157370_10001745 Ga0157370_1000174514 378
48 3300015261 Ga0182006_1046467 Ga0182006_10464672 378
49 3300017792 Ga0163161_10053011 Ga0163161_100530112 378
50 3300025263 Ga0209565_1000052 Ga0209565_1000052161 378
51 3300025298 Ga0209050_1000001 Ga0209050_1000001401 378
52 3300025298 Ga0209050_1001214 Ga0209050_100121420 378
53 3300025298 Ga0209050_1016658 Ga0209050_10166584 378
54 3300025303 Ga0209051_1000297 Ga0209051_100029733 378
55 3300025304 Ga0209257_1001308 Ga0209257_100130822 378
56 3300025728 Ga0207655_1004001 Ga0207655_10040016 378
57 3300025735 Ga0207713_1009600 Ga0207713_10096006 378
58 3300028800 Ga0265338_10043183 Ga0265338_100431833 378
59 3300042010 Ga0439452_000021 Ga0439452_000021_107525_108673 378
60 3300048919 Ga0496116_0002526 Ga0496116_0002526_13429_14577 378
61 3300048920 Ga0496117_0001144 Ga0496117_0001144_20716_21864 378
62 3300048927 Ga0496124_0072335 Ga0496124_0072335_320_1468 378
63 iso_pu_bacteria 2510065053 2510283841 378
64 iso_pu_bacteria 2510065055 2510293892 378
65 iso_pu_bacteria 2510065058 2510311423 378
66 iso_pu_bacteria 2773857672 2774128361 378
67 iso_pu_bacteria 2844528606 2844529600 378
68 iso_pu_bacteria 2865014394 2865014559 378
69 iso_pu_bacteria 2881609920 2881611357 378
70 iso_pu_bacteria 2917832318 2917835270 378
71 iso_pu_bacteria 2919125081 2919127112 378
72 iso_pu_bacteria 2945951305 2945955969 378
73 iso_pu_bacteria 2974298342 2974299482 378
74 iso_pu_bacteria 2977240413 2977241434 378
75 iso_pu_bacteria 2978975091 2978975414 378
76 iso_pu_bacteria 2984499530 2984501834 378
77 iso_pu_bacteria 2984504281 2984504681 378
78 iso_pu_bacteria 640427133 640489816 378
79 iso_pu_bacteria 651053060 651177839 378
80 iso_pu_bacteria 8016728285 8016733503 378
81 3300020070 Ga0206356_11479263 Ga0206356_114792633 379
82 3300046660 Ga0495625_0014585 Ga0495625_0014585_3393_4568 379
83 3300048918 Ga0496115_0000956 Ga0496115_0000956_9979_11142 379
84 3300006946 Ga0079104_1000588 Ga0079104_100058815 380
85 3300013307 Ga0157372_10078912 Ga0157372_100789122 380
86 3300027111 Ga0209281_1000564 Ga0209281_100056428 380
87 3300027312 Ga0209371_1002963 Ga0209371_10029636 380
88 3300030500 Ga0268256_1003824 Ga0268256_10038243 380
89 3300031824 Ga0307413_10173740 Ga0307413_101737402 380
90 3300031852 Ga0307410_10063373 Ga0307410_100633732 380
91 3300048904 Ga0496101_0002329 Ga0496101_0002329_9904_11064 380
92 iso_pu_bacteria 2846540461 2846540910 380
93 iso_pu_bacteria 8056875544 8056879850 380
94 3300006178 Ga0075367_10009616 Ga0075367_100096163 381
95 3300027395 Ga0209996_1001472 Ga0209996_10014722 381
96 3300027876 Ga0209974_10007133 Ga0209974_100071332 381
97 3300031456 Ga0307513_10083929 Ga0307513_100839293 381
98 iso_pu_bacteria 2857553236 2857554987 381
99 iso_pu_bacteria 2904424332 2904429921 381
100 3300002737 JGI25162J39368_1002584 JGI25162J39368_10025848 382
101 3300003578 Ga0006562J51391_1070523 Ga0006562J51391_10705231 382
102 3300003856 Ga0058692_1000036 Ga0058692_100003697 382
103 3300005347 Ga0070668_100008540 Ga0070668_1000085402 382
104 3300005353 Ga0070669_100125277 Ga0070669_1001252771 382
105 3300009011 Ga0105251_10000628 Ga0105251_1000062810 382
106 3300009011 Ga0105251_10018342 Ga0105251_100183422 382
107 3300009148 Ga0105243_10037467 Ga0105243_100374672 382
108 3300013102 Ga0157371_10009935 Ga0157371_100099353 382
109 3300013104 Ga0157370_10048690 Ga0157370_100486902 382
110 3300013105 Ga0157369_10003882 Ga0157369_1000388212 382
111 3300013307 Ga0157372_10005177 Ga0157372_100051778 382
112 3300015261 Ga0182006_1008611 Ga0182006_10086112 382
113 3300015262 Ga0182007_10036975 Ga0182007_100369752 382
114 3300025233 Ga0209437_100032 Ga0209437_100032412 382
115 3300025711 Ga0207696_1005318 Ga0207696_10053184 382
116 3300025735 Ga0207713_1000011 Ga0207713_1000011442 382
117 3300025935 Ga0207709_10019526 Ga0207709_100195262 382
118 3300027312 Ga0209371_1000034 Ga0209371_1000034146 382
119 3300027312 Ga0209371_1000468 Ga0209371_100046823 382
120 3300027312 Ga0209371_1004424 Ga0209371_10044244 382
121 3300030500 Ga0268256_1000043 Ga0268256_1000043179 382
122 3300030500 Ga0268256_1000396 Ga0268256_100039623 382
123 3300030500 Ga0268256_1018684 Ga0268256_10186842 382
124 3300031727 Ga0316576_10075524 Ga0316576_100755242 382
125 3300031731 Ga0307405_10172882 Ga0307405_101728822 382
126 3300032126 Ga0307415_100020465 Ga0307415_1000204653 382
127 3300041407 Ga0439447_008023 Ga0439447_008023_588_1748 382
128 3300041411 Ga0439466_0000020 Ga0439466_0000020_41645_42805 382
129 3300042146 Ga0450907_000307 Ga0450907_000307_12286_13446 382
130 3300042439 Ga0439464_0001423 Ga0439464_0001423_1162_2322 382
131 3300046500 Ga0495596_0005072 Ga0495596_0005072_2074_3234 382
132 3300046500 Ga0495596_0006774 Ga0495596_0006774_1361_2527 382
133 3300046522 Ga0495643_0047618 Ga0495643_0047618_1038_2198 382
134 3300046524 Ga0495648_0011974 Ga0495648_0011974_4207_5367 382
135 3300046542 Ga0495597_0001604 Ga0495597_0001604_7276_8442 382
136 3300046794 Ga0495589_0000266 Ga0495589_0000266_16505_17671 382
137 3300046810 Ga0495660_0029989 Ga0495660_0029989_1774_2934 382
138 3300047320 Ga0495672_0000037 Ga0495672_0000037_236556_237716 382
139 3300047443 Ga0495687_000637 Ga0495687_000637_25469_26635 382
140 3300047446 Ga0495679_001688 Ga0495679_001688_4206_5366 382
141 3300048905 Ga0496102_0001101 Ga0496102_0001101_3746_4906 382
142 3300048908 Ga0496105_0004155 Ga0496105_0004155_5055_6215 382
143 3300048919 Ga0496116_0027266 Ga0496116_0027266_2673_3833 382
144 3300048919 Ga0496116_0077891 Ga0496116_0077891_755_1915 382
145 3300048920 Ga0496117_0000017 Ga0496117_0000017_355850_357010 382
146 3300048920 Ga0496117_0000153 Ga0496117_0000153_94923_96083 382
147 3300048921 Ga0496118_0000018 Ga0496118_0000018_355850_357010 382
148 3300048922 Ga0496119_0000084 Ga0496119_0000084_74632_75792 382
149 3300048923 Ga0496120_0000005 Ga0496120_0000005_483024_484184 382
150 3300048923 Ga0496120_0000010 Ga0496120_0000010_250154_251314 382
151 3300048924 Ga0496121_0000055 Ga0496121_0000055_105987_107147 382
152 3300048925 Ga0496122_0004284 Ga0496122_0004284_15771_16937 382
153 3300048925 Ga0496122_0005691 Ga0496122_0005691_13112_14272 382
154 3300048926 Ga0496123_0000751 Ga0496123_0000751_38236_39396 382
155 3300048926 Ga0496123_0001323 Ga0496123_0001323_11397_12563 382
156 3300048927 Ga0496124_0000158 Ga0496124_0000158_15441_16601 382
157 3300048927 Ga0496124_0004758 Ga0496124_0004758_796_1956 382
158 3300048928 Ga0496125_0004633 Ga0496125_0004633_3455_4615 382
159 3300048929 Ga0496126_0033883 Ga0496126_0033883_2714_3874 382
160 3300049459 Ga0495678_024124 Ga0495678_024124_23_1183 382
161 iso_pu_bacteria 2599185354 2600203297 382
162 iso_pu_bacteria 2751185897 2753766875 382
163 3300035170 Ga0373943_0119568 Ga0373943_0119568_19_1200 383
164 3300044672 Ga0466982_0078539 Ga0466982_0078539_691_1863 383
165 3300048913 Ga0496110_0001412 Ga0496110_0001412_4226_5401 383
166 3300049576 Ga0501040_0000494 Ga0501040_0000494_21415_22587 383
167 iso_pu_bacteria 2830075706 2830076280 383
168 3300009551 Ga0105238_10163723 Ga0105238_101637232 384
169 3300010375 Ga0105239_10000271 Ga0105239_1000027116 384
170 3300025913 Ga0207695_10005114 Ga0207695_100051148 384
171 3300025924 Ga0207694_10089855 Ga0207694_100898553 384
172 3300048924 Ga0496121_0000163 Ga0496121_0000163_139007_140161 384
173 3300048924 Ga0496121_0000949 Ga0496121_0000949_45818_46972 384
174 3300048929 Ga0496126_0023470 Ga0496126_0023470_4483_5637 384
175 iso_pu_bacteria 2885429604 2885432598 384
176 iso_pu_bacteria 2946787523 2946790291 384
177 iso_pu_bacteria 2990265787 2990268169 384
178 iso_pu_bacteria 2993693658 2993696806 384
179 3300006946 Ga0079104_1004271 Ga0079104_10042716 385
180 3300009036 Ga0105244_10000269 Ga0105244_1000026918 385
181 3300013100 Ga0157373_10056609 Ga0157373_100566092 385
182 3300013105 Ga0157369_10086724 Ga0157369_100867243 385
183 3300015261 Ga0182006_1000116 Ga0182006_100011618 385
184 3300015265 Ga0182005_1000003 Ga0182005_1000003143 385
185 3300022739 Ga0228711_1013421 Ga0228711_10134218 385
186 3300022740 Ga0228710_1002821 Ga0228710_100282130 385
187 3300028786 Ga0307517_10204074 Ga0307517_102040741 385
188 3300031456 Ga0307513_10075754 Ga0307513_100757542 385
189 3300033180 Ga0307510_10000535 Ga0307510_100005354 385
190 3300046512 Ga0495610_0006461 Ga0495610_0006461_4425_5600 385
191 3300046665 Ga0495661_0000497 Ga0495661_0000497_28490_29665 385
192 3300048903 Ga0496100_0093171 Ga0496100_0093171_537_1712 385
193 3300048904 Ga0496101_0058063 Ga0496101_0058063_610_1785 385
194 3300048906 Ga0496103_0002834 Ga0496103_0002834_6091_7266 385
195 3300048912 Ga0496109_0007449 Ga0496109_0007449_8042_9217 385
196 3300048916 Ga0496113_0001197 Ga0496113_0001197_7107_8282 385
197 3300048917 Ga0496114_0087665 Ga0496114_0087665_240_1415 385
198 3300048925 Ga0496122_0001184 Ga0496122_0001184_26272_27447 385
199 3300048926 Ga0496123_0001715 Ga0496123_0001715_26399_27574 385
200 3300048928 Ga0496125_0000991 Ga0496125_0000991_25881_27056 385
201 3300049459 Ga0495678_000001 Ga0495678_000001_1008743_1009918 385
202 3300050489 nmdc:mga03683_37821_c1 nmdc:mga03683_37821_c1_148_1323 385
203 3300053087 Ga0500643_007507 Ga0500643_007507_98_1255 385
204 iso_pu_bacteria 2517487022 2517568138 385
205 iso_pu_bacteria 2802428859 2802723914 385
206 iso_pu_bacteria 2919476304 2919478907 385
207 iso_pu_bacteria 2970026789 2970032971 385
208 3300003214 JGI25165J46597_1000010 JGI25165J46597_1000010189 386
209 3300003215 JGI25153J46596_10009247 JGI25153J46596_100092475 386
210 3300003773 Ga0055537_1002195 Ga0055537_10021956 386
211 3300003775 Ga0055524_1000210 Ga0055524_100021044 386
212 3300003791 Ga0055530_10000117 Ga0055530_1000011713 386
213 3300003791 Ga0055530_10011240 Ga0055530_100112403 386
214 3300003794 Ga0055531_10000180 Ga0055531_1000018014 386
215 3300003794 Ga0055531_10004873 Ga0055531_100048734 386
216 3300005262 Ga0065165_1001363 Ga0065165_100136323 386
217 3300005262 Ga0065165_1002232 Ga0065165_100223216 386
218 3300005539 Ga0068853_100196352 Ga0068853_1001963522 386
219 3300005618 Ga0068864_100000080 Ga0068864_10000008073 386
220 3300005618 Ga0068864_100000218 Ga0068864_10000021852 386
221 3300005834 Ga0068851_10098933 Ga0068851_100989332 386
222 3300005841 Ga0068863_100000087 Ga0068863_10000008773 386
223 3300005842 Ga0068858_100000352 Ga0068858_10000035220 386
224 3300005842 Ga0068858_100003280 Ga0068858_1000032809 386
225 3300005844 Ga0068862_100000101 Ga0068862_10000010173 386
226 3300006051 Ga0075364_10142004 Ga0075364_101420042 386
227 3300009011 Ga0105251_10000248 Ga0105251_1000024826 386
228 3300009011 Ga0105251_10006071 Ga0105251_100060717 386
229 3300009036 Ga0105244_10009073 Ga0105244_100090735 386
230 3300009098 Ga0105245_10000318 Ga0105245_1000031810 386
231 3300009177 Ga0105248_10008190 Ga0105248_100081909 386
232 3300010375 Ga0105239_10483109 Ga0105239_104831092 386
233 3300013102 Ga0157371_10000010 Ga0157371_10000010231 386
234 3300013105 Ga0157369_10000874 Ga0157369_1000087429 386
235 3300013306 Ga0163162_10002088 Ga0163162_100020887 386
236 3300013306 Ga0163162_10075900 Ga0163162_100759003 386
237 3300013306 Ga0163162_10084010 Ga0163162_100840101 386
238 3300014497 Ga0182008_10023665 Ga0182008_100236651 386
239 3300015261 Ga0182006_1020618 Ga0182006_10206182 386
240 3300021384 Ga0213876_10000168 Ga0213876_1000016823 386
241 3300025233 Ga0209437_104978 Ga0209437_1049782 386
242 3300025245 Ga0207425_1003144 Ga0207425_10031442 386
243 3300025261 Ga0209233_1000044 Ga0209233_1000044294 386
244 3300025263 Ga0209565_1000029 Ga0209565_100002926 386
245 3300025273 Ga0209673_1002360 Ga0209673_100236014 386
246 3300025291 Ga0209675_1003172 Ga0209675_10031727 386
247 3300025297 Ga0209758_1001653 Ga0209758_100165326 386
248 3300025298 Ga0209050_1000131 Ga0209050_1000131111 386
249 3300025298 Ga0209050_1009212 Ga0209050_10092121 386
250 3300025299 Ga0209256_1000008 Ga0209256_1000008635 386
251 3300025304 Ga0209257_1000028 Ga0209257_1000028477 386
252 3300025304 Ga0209257_1005585 Ga0209257_10055857 386
253 3300025913 Ga0207695_10030277 Ga0207695_100302773 386
254 3300025921 Ga0207652_10164553 Ga0207652_101645532 386
255 3300025924 Ga0207694_10036589 Ga0207694_100365892 386
256 3300025925 Ga0207650_10000261 Ga0207650_1000026129 386
257 3300025927 Ga0207687_10000398 Ga0207687_1000039827 386
258 3300025941 Ga0207711_10012342 Ga0207711_100123426 386
259 3300025986 Ga0207658_10000239 Ga0207658_1000023929 386
260 3300026035 Ga0207703_10000901 Ga0207703_1000090124 386
261 3300026035 Ga0207703_10001110 Ga0207703_100011109 386
262 3300026089 Ga0207648_10171086 Ga0207648_101710861 386
263 3300026095 Ga0207676_10000169 Ga0207676_1000016952 386
264 3300028800 Ga0265338_10006570 Ga0265338_100065705 386
265 3300031616 Ga0307508_10000011 Ga0307508_10000011103 386
266 3300031711 Ga0265314_10100136 Ga0265314_101001362 386
267 3300031730 Ga0307516_10211070 Ga0307516_102110702 386
268 3300031911 Ga0307412_10006280 Ga0307412_100062802 386
269 3300039437 Ga0436365_1053358 Ga0436365_1053358_44487_45701 386
270 3300039437 Ga0436365_1206395 Ga0436365_1206395_187_1350 386
271 3300039450 Ga0436363_0559446 Ga0436363_0559446_196_1410 386
272 3300041413 Ga0439465_0036108 Ga0439465_0036108_323_1483 386
273 3300041997 Ga0439431_0000227 Ga0439431_0000227_6758_7918 386
274 3300041997 Ga0439431_0007811 Ga0439431_0007811_807_1967 386
275 3300042002 Ga0439442_008085 Ga0439442_008085_176_1336 386
276 3300042004 Ga0439445_0001121 Ga0439445_0001121_977_2137 386
277 3300042010 Ga0439452_007288 Ga0439452_007288_2168_3328 386
278 3300042014 Ga0439457_010986 Ga0439457_010986_485_1645 386
279 3300042156 Ga0439446_0015542 Ga0439446_0015542_37_1197 386
280 3300042435 Ga0439434_0000547 Ga0439434_0000547_613_1773 386
281 3300046457 Ga0495590_0019954 Ga0495590_0019954_120_1307 386
282 3300046460 Ga0495638_0000741 Ga0495638_0000741_7493_8668 386
283 3300046471 Ga0495650_0001694 Ga0495650_0001694_3938_5119 386
284 3300046506 Ga0495583_0004057 Ga0495583_0004057_2085_3272 386
285 3300046506 Ga0495583_0015040 Ga0495583_0015040_1977_3137 386
286 3300046518 Ga0495631_0001660 Ga0495631_0001660_7924_9111 386
287 3300046520 Ga0495637_0000156 Ga0495637_0000156_18555_19736 386
288 3300046520 Ga0495637_0025490 Ga0495637_0025490_449_1636 386
289 3300046524 Ga0495648_0058466 Ga0495648_0058466_160_1347 386
290 3300046530 Ga0495654_0000015 Ga0495654_0000015_240601_241782 386
291 3300046616 Ga0495668_0001176 Ga0495668_0001176_19158_20345 386
292 3300046660 Ga0495625_0000094 Ga0495625_0000094_7695_8861 386
293 3300046691 Ga0495670_0000016 Ga0495670_0000016_8125_9288 386
294 3300046691 Ga0495670_0009975 Ga0495670_0009975_1068_2258 386
295 3300046692 Ga0495671_0029787 Ga0495671_0029787_553_1740 386
296 3300046810 Ga0495660_0045576 Ga0495660_0045576_143_1330 386
297 3300047445 Ga0495677_0070716 Ga0495677_0070716_103_1263 386
298 3300047446 Ga0495679_002421 Ga0495679_002421_5441_6628 386
299 3300047472 Ga0495686_0018295 Ga0495686_0018295_1619_2842 386
300 3300048906 Ga0496103_0188626 Ga0496103_0188626_68_1231 386
301 3300048920 Ga0496117_0007410 Ga0496117_0007410_753_1916 386
302 3300048921 Ga0496118_0000335 Ga0496118_0000335_44095_45258 386
303 3300048924 Ga0496121_0005688 Ga0496121_0005688_1961_3136 386
304 3300049459 Ga0495678_000368 Ga0495678_000368_28249_29436 386
305 3300050491 nmdc:mga00v17_1830_c1 nmdc:mga00v17_1830_c1_316_1557 386
306 3300053104 Ga0500556_0010302 Ga0500556_0010302_1420_2580 386
307 3300053134 Ga0500658_0001451 Ga0500658_0001451_2923_4107 386
308 3300053134 Ga0500658_0020744 Ga0500658_0020744_1238_2398 386
309 3300053136 Ga0500559_0049808 Ga0500559_0049808_110_1285 386
310 3300053136 Ga0500559_0087199 Ga0500559_0087199_66_1256 386
311 3300053153 Ga0500616_0038736 Ga0500616_0038736_601_1791 386
312 3300053730 Ga0500645_002914 Ga0500645_002914_1440_2600 386
313 3300002774 JGI25150J39212_1000367 JGI25150J39212_100036710 387
314 3300003215 JGI25153J46596_10000125 JGI25153J46596_1000012521 387
315 3300003771 Ga0055526_1005294 Ga0055526_10052944 387
316 3300003794 Ga0055531_10004733 Ga0055531_100047338 387
317 3300005719 Ga0068861_100000269 Ga0068861_10000026924 387
318 3300005937 Ga0081455_10002849 Ga0081455_100028497 387
319 3300009177 Ga0105248_10001383 Ga0105248_1000138323 387
320 3300013297 Ga0157378_10013448 Ga0157378_100134482 387
321 3300025245 Ga0207425_1000005 Ga0207425_1000005892 387
322 3300025258 Ga0209129_1001418 Ga0209129_100141810 387
323 3300025263 Ga0209565_1021259 Ga0209565_10212592 387
324 3300025292 Ga0209676_1014024 Ga0209676_10140243 387
325 3300025294 Ga0209025_1000855 Ga0209025_100085545 387
326 3300025295 Ga0209564_1000783 Ga0209564_100078337 387
327 3300025297 Ga0209758_1000002 Ga0209758_1000002453 387
328 3300025298 Ga0209050_1005263 Ga0209050_10052637 387
329 3300025304 Ga0209257_1001601 Ga0209257_100160116 387
330 3300025941 Ga0207711_10003539 Ga0207711_100035395 387
331 3300026116 Ga0207674_10007710 Ga0207674_100077105 387
332 3300026118 Ga0207675_100000856 Ga0207675_10000085623 387
333 3300031548 Ga0307408_100053217 Ga0307408_1000532172 387
334 3300031911 Ga0307412_10032530 Ga0307412_100325302 387
335 3300031911 Ga0307412_10059577 Ga0307412_100595772 387
336 3300031995 Ga0307409_100081641 Ga0307409_1000816412 387
337 3300046525 Ga0495663_0007222 Ga0495663_0007222_860_2023 387
338 3300046530 Ga0495654_0001867 Ga0495654_0001867_9399_10562 387
339 3300046616 Ga0495668_0002552 Ga0495668_0002552_9062_10225 387
340 3300048927 Ga0496124_0136674 Ga0496124_0136674_31_1263 387
341 3300053116 Ga0500592_000174 Ga0500592_000174_9894_11057 387
342 3300053140 Ga0500573_0000290 Ga0500573_0000290_5210_6373 387
343 3300053151 Ga0500604_0000882 Ga0500604_0000882_110_1273 387
344 3300053158 Ga0500627_0002029 Ga0500627_0002029_3406_4569 387
345 3300001904 JGI24736J21556_1000079 JGI24736J21556_10000797 388
346 3300001979 JGI24740J21852_10014968 JGI24740J21852_100149682 388
347 3300001989 JGI24739J22299_10003256 JGI24739J22299_100032563 388
348 3300002067 JGI24735J21928_10009564 JGI24735J21928_100095642 388
349 3300002075 JGI24738J21930_10001766 JGI24738J21930_100017662 388
350 3300002239 JGI24034J26672_10000024 JGI24034J26672_100000245 388
351 3300005295 Ga0065707_10082279 Ga0065707_100822796 388
352 3300005535 Ga0070684_100318037 Ga0070684_1003180371 388
353 3300005841 Ga0068863_100000010 Ga0068863_100000010120 388
354 3300013105 Ga0157369_10087455 Ga0157369_100874553 388
355 3300013306 Ga0163162_10198122 Ga0163162_101981222 388
356 3300025904 Ga0207647_10000283 Ga0207647_100002835 388
357 3300025911 Ga0207654_10035442 Ga0207654_100354422 388
358 3300025913 Ga0207695_10005579 Ga0207695_100055796 388
359 3300025919 Ga0207657_10040753 Ga0207657_100407533 388
360 3300025924 Ga0207694_10030138 Ga0207694_100301382 388
361 3300025949 Ga0207667_10005172 Ga0207667_100051726 388
362 3300026067 Ga0207678_10028167 Ga0207678_100281672 388
363 3300026078 Ga0207702_10001125 Ga0207702_100011253 388
364 3300026088 Ga0207641_10000171 Ga0207641_100001714 388
365 3300026116 Ga0207674_10061782 Ga0207674_100617823 388
366 3300026142 Ga0207698_10205195 Ga0207698_102051952 388
367 3300046524 Ga0495648_0006694 Ga0495648_0006694_1907_3097 388
368 3300047472 Ga0495686_0000100 Ga0495686_0000100_124620_125801 388
369 3300047472 Ga0495686_0000770 Ga0495686_0000770_4917_6086 388
370 3300048922 Ga0496119_0056541 Ga0496119_0056541_1057_2238 388
371 3300053087 Ga0500643_000467 Ga0500643_000467_27354_28520 388
372 3300053136 Ga0500559_0017036 Ga0500559_0017036_1349_2524 388

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05834

Lycopene_cycl

Lycopene cyclase protein

44

415

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3b1f-assembly1.cif.gz_A-2 crystal structure of prephenate dehydrogenase from streptococcus mutans 0.8447 5 41
5vj7-assembly1.cif.gz_A ferredoxin nadp oxidoreductase (xfn) 0.7986 5 45
2jfo-assembly1.cif.gz_B crystal structure of enterococcus faecalis glutamate racemase in complex with d- and l-glutamate 0.7779 8 37
2jfq-assembly1.cif.gz_B crystal structure of staphylococcus aureus glutamate racemase in complex with d- glutamate 0.7571 7 37
3ggp-assembly2.cif.gz_D crystal structure of prephenate dehydrogenase from a. aeolicus in complex with hydroxyphenyl propionate and nad+ 0.7298 1 40
ID Description Score Start End Superfamily
3c4aA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9343 8 41 3.50.50.60
af_Q22090_1_272_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9217 8 41 3.40.50.720
3dzbA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8928 8 41 3.40.50.720
6eodD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8582 7 37 3.40.50.720
af_Q4CWB6_396_583_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8409 8 41 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3D2E860-F1-model_v4 deleted 1.003 318 384
AF-A0A3A1PHR4-F1-model_v4 Lycopene cyclase family protein 0.9928 309 382
AF-A0A520HG62-F1-model_v4 Lycopene cyclase 0.9907 30 363 GO:0016117
GO:0016705
GO:0045436
AF-A0A2N3D9P3-F1-model_v4 Lycopene cyclase 0.9879 1 387 GO:0016117
GO:0016705
GO:0045436
AF-A0A553WKU7-F1-model_v4 Lycopene beta-cyclase CrtY (EC 5.5.1.19) 0.9874 6 382 GO:0016117
GO:0016705
GO:0045436

Feature Viewer

pLDDT pTM Quality
90.74 0.9 High
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Predicted Structure (AlphaFold2)

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