F424197

General Info

Members Datasets Scaffolds Average Seq Length
366 227 732 450

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2904424332|2904425422
Length 475
Sequence QTVLAFVVCLGSLIVFHELGHYLVARWCGVKVLRFSVGMGKIVWSRRFGPDQTEWAVSALPLGGYVKMLDAREGDLAHLPPEELKREFTRQNVWKRIAIVGAGPLANFLIAIVLFAGLYMHGVEEPVSRVSVRASEVVELSAGAVSPTASPTASSSAPSTPIATPAWRAGLRSGDLVTAINDQPVSVWSELRWNLMQSAIDKKEARLTVERPGQGRMHVVLAAEVLAALDLDGDIVGKLGLGVARPAPVVQQVIAGGPAERAGLRKDDLLLAVDGTPVEDGIAFIDLIRASAGKTVSVAVRRDGQPVTLAMTPQAEQAKSGKGTVTVGKIGASIALQPDMITVPSSPPAALGKALARVWDTCTMTLKMIGKMIVGEVSLKNVTGPITIADYAGQTARMGVASYLSFIAFISISLGVMNLLPIPVLDGGHLLYYSLEVLTGRPVPERFNEIAQRVGIGLLMTLMLLAVFNDVARLL

Samples

Sample ID Description Type Environment
1 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
2 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
7 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
16 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
28 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
39 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
42 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
47 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
48 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
49 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
57 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
59 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
70 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
84 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
85 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
92 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
99 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
100 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
101 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
102 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
106 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
109 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
110 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
111 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
112 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
113 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
114 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
117 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
118 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
126 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
127 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
131 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
132 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
133 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
134 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
142 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
143 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
144 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
145 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
146 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
149 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
161 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
162 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
163 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
168 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
169 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
170 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
176 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
177 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
178 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
179 2904424332 Duganella sp. 1411 Isolate Rhizosphere
180 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
181 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
182 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
183 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
184 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
185 2643221645 Massilia sp. Root351 Isolate Unclassified
186 2643221664 Massilia sp. Root418 Isolate Unclassified
187 2738541280 Massilia sp. GV090 Isolate Unclassified
188 2738541297 Duganella sp. GV083 Isolate Unclassified
189 2738541300 Massilia sp. GV016 Isolate Unclassified
190 2738541357 Duganella sp. GV053 Isolate Unclassified
191 2738543003 Duganella sp. GV066 Isolate Unclassified
192 2738543018 Massilia sp. GV045 Isolate Unclassified
193 2738543026 Duganella sp. GV089 Isolate Unclassified
194 2738543029 Duganella sp. GV039 Isolate Unclassified
195 2738543030 Massilia sp. GV097 Isolate Unclassified
196 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
197 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
198 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
199 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
200 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
201 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
202 2821131069 Duganella sp. 1224 Isolate Unclassified
203 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
204 2842711865 Duganella sp. R-73148 Isolate Unclassified
205 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
206 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
207 2857553236 Duganella sp. R-74557 Isolate Unclassified
208 2857558681 Duganella sp. R-74565 Isolate Unclassified
209 2857564685 Duganella sp. R-74599 Isolate Unclassified
210 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
211 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
212 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
213 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
214 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
215 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
216 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
217 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
218 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
219 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
220 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
221 2919476304 Duganella sp. 3397 Isolate Unclassified
222 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
223 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
224 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
225 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
226 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
227 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.61
Metatranscriptomes 0
Isolates 13.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.67
Nodule 1.09
Rhizoplane 3.01
Rhizosphere 66.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000001 3300002737 Bacteria 740113
2 JGI25154J39366_1000727 3300002738 Bacteria 14861
3 JGI25165J46597_1000001 3300003214 Bacteria 1111887
4 rootH1_10031553 3300003323 Bacteria 1841
5 Ga0055538_1000001 3300003751 Bacteria 1111887
6 Ga0055538_1000002 3300003751 Bacteria 999437
7 Ga0055539_1000001 3300003752 Bacteria 1111887
8 Ga0055539_1000002 3300003752 Bacteria 999437
9 Ga0055533_1000003 3300003756 Bacteria 1111887
10 Ga0055533_1000004 3300003756 Bacteria 999437
11 Ga0055525_1000002 3300003759 Bacteria 999437
12 Ga0055525_1000003 3300003759 Bacteria 962094
13 Ga0055529_1000138 3300003763 Bacteria 103490
14 Ga0055526_1000360 3300003771 Bacteria 36816
15 Ga0055526_1000373 3300003771 Bacteria 36351
16 Ga0055526_1001922 3300003771 Bacteria 14367
17 Ga0055537_1001518 3300003773 Bacteria 8919
18 Ga0055524_1000010 3300003775 Bacteria 282893
19 Ga0055524_1008333 3300003775 Bacteria 4313
20 Ga0055534_1000314 3300003784 Bacteria 32324
21 Ga0055528_1000127 3300003790 Bacteria 61277
22 Ga0055541_1000001 3300003841 Bacteria 1111887
23 Ga0055541_1000002 3300003841 Bacteria 896405
24 Ga0055543_1007886 3300004625 Bacteria 2415
25 Ga0065165_1000007 3300005262 Bacteria 337871
26 Ga0070682_100028508 3300005337 Bacteria 3358
27 Ga0070660_100000942 3300005339 Bacteria 19423
28 Ga0070659_100008854 3300005366 Bacteria 7376
29 Ga0068855_100001340 3300005563 Bacteria 30486
30 Ga0068855_100070446 3300005563 Bacteria 4068
31 Ga0070664_100021533 3300005564 Bacteria 5315
32 Ga0068854_100000993 3300005578 Bacteria 17083
33 Ga0075364_10080586 3300006051 Bacteria 2152
34 Ga0075362_10024808 3300006177 Bacteria 2546
35 Ga0075366_10013882 3300006195 Bacteria 4592
36 Ga0099826_10000002 3300006948 Bacteria 1125830
37 Ga0105244_10005718 3300009036 Bacteria 8206
38 Ga0111539_10005602 3300009094 Bacteria 16241
39 Ga0105242_10186490 3300009176 Bacteria 1833
40 Ga0105237_10044600 3300009545 Bacteria 4465
41 Ga0105238_10012599 3300009551 Bacteria 8536
42 Ga0105239_10107916 3300010375 Bacteria 3084
43 Ga0105239_10314457 3300010375 Bacteria 1765
44 Ga0157371_10000040 3300013102 Bacteria 207451
45 Ga0182008_10005984 3300014497 Bacteria 6848
46 Ga0157376_10065503 3300014969 Bacteria 3068
47 Ga0182006_1000043 3300015261 Bacteria 200870
48 Ga0182006_1000112 3300015261 Bacteria 87378
49 Ga0182006_1002767 3300015261 Bacteria 9379
50 Ga0182006_1009230 3300015261 Bacteria 4431
51 Ga0182007_10000020 3300015262 Bacteria 194053
52 Ga0182007_10005189 3300015262 Bacteria 5758
53 Ga0182005_1000001 3300015265 Bacteria 1014869
54 Ga0182005_1000037 3300015265 Bacteria 166102
55 Ga0163161_10038971 3300017792 Bacteria 3409
56 Ga0213872_10000001 3300021361 Bacteria 662532
57 Ga0213872_10005667 3300021361 Bacteria 6364
58 Ga0209784_100002 3300025224 Bacteria 1753105
59 Ga0209784_100004 3300025224 Bacteria 1378156
60 Ga0209566_100003 3300025225 Bacteria 1753105
61 Ga0209566_100004 3300025225 Bacteria 1531866
62 Ga0209674_100004 3300025226 Bacteria 1753105
63 Ga0209674_100006 3300025226 Bacteria 1531866
64 Ga0209563_100006 3300025230 Bacteria 1753105
65 Ga0209563_100009 3300025230 Bacteria 1378156
66 Ga0207427_101388 3300025231 Bacteria 8868
67 Ga0209437_100004 3300025233 Bacteria 1378156
68 Ga0209646_1000522 3300025246 Bacteria 17048
69 Ga0209677_100003 3300025253 Bacteria 1753105
70 Ga0209677_100005 3300025253 Bacteria 1378156
71 Ga0209233_1000005 3300025261 Bacteria 1531866
72 Ga0209565_1000202 3300025263 Bacteria 70900
73 Ga0209455_1000043 3300025272 Bacteria 413928
74 Ga0209673_1000007 3300025273 Bacteria 634477
75 Ga0209130_1000156 3300025284 Bacteria 101929
76 Ga0209675_1000009 3300025291 Bacteria 562872
77 Ga0209025_1001761 3300025294 Bacteria 25914
78 Ga0209564_1000011 3300025295 Bacteria 822327
79 Ga0209564_1000089 3300025295 Bacteria 249694
80 Ga0209564_1000203 3300025295 Bacteria 136358
81 Ga0209758_1000286 3300025297 Bacteria 99636
82 Ga0209256_1000007 3300025299 Bacteria 1136599
83 Ga0209256_1003915 3300025299 Bacteria 9838
84 Ga0207655_1007036 3300025728 Bacteria 7365
85 Ga0207695_10005150 3300025913 Bacteria 17509
86 Ga0207671_10030617 3300025914 Bacteria 4012
87 Ga0207657_10002268 3300025919 Bacteria 20858
88 Ga0207694_10001629 3300025924 Bacteria 18867
89 Ga0207690_10038945 3300025932 Bacteria 3098
90 Ga0207665_10027036 3300025939 Bacteria 3790
91 Ga0207679_10001663 3300025945 Bacteria 13853
92 Ga0207667_10000036 3300025949 Bacteria 297966
93 Ga0207667_10036551 3300025949 Bacteria 5263
94 Ga0209281_1004662 3300027111 Bacteria 4037
95 Ga0209282_1000001 3300027666 Bacteria 2450367
96 Ga0207428_10080644 3300027907 Bacteria 2542
97 Ga0307509_10000815 3300031507 Bacteria 53574
98 Ga0307408_100000269 3300031548 Bacteria 52322
99 Ga0316575_10000678 3300031665 Bacteria 10123
100 Ga0265314_10007981 3300031711 Bacteria 9131
101 Ga0373939_0017394 3300035114 Bacteria 1909
102 Ga0395899_0002338 3300037312 Bacteria 15438
103 Ga0395899_0005813 3300037312 Bacteria 9575
104 Ga0395899_0009322 3300037312 Bacteria 7539
105 Ga0395900_0011176 3300037418 Bacteria 9179
106 Ga0395900_0067605 3300037418 Bacteria 3671
107 Ga0395900_0118718 3300037418 Bacteria 2714
108 Ga0395898_0012245 3300037466 Bacteria 8867
109 Ga0395905_0004238 3300037471 Bacteria 14995
110 Ga0395905_0006310 3300037471 Bacteria 11957
111 Ga0395901_0000482 3300038443 Bacteria 46374
112 Ga0395901_0024592 3300038443 Bacteria 6184
113 Ga0436361_0075458 3300039447 Bacteria 23492
114 Ga0436361_0606507 3300039447 Bacteria 4225
115 Ga0451577_0001801 3300042876 Bacteria 27422
116 Ga0451577_0075548 3300042876 Bacteria 3004
117 Ga0466972_0000060 3300044658 Bacteria 109789
118 Ga0466965_0044901 3300044683 Bacteria 2185
119 Ga0466965_0077268 3300044683 Bacteria 1681
120 Ga0466966_0025802 3300044684 Bacteria 3838
121 Ga0466964_0066420 3300044706 Bacteria 1513
122 Ga0453684_0000005 3300044712 Bacteria 1431632
123 Ga0453684_0000280 3300044712 Bacteria 219955
124 Ga0453684_0000379 3300044712 Bacteria 182319
125 Ga0453684_0000512 3300044712 Bacteria 150627
126 Ga0466970_0077422 3300044765 Bacteria 1793
127 Ga0451576_0000461 3300045051 Bacteria 92083
128 Ga0451576_0012893 3300045051 Bacteria 9369
129 Ga0451576_0017637 3300045051 Bacteria 7845
130 Ga0495617_000062 3300046452 Bacteria 96803
131 Ga0495617_001638 3300046452 Bacteria 9632
132 Ga0495627_000059 3300046453 Bacteria 142466
133 Ga0495627_005696 3300046453 Bacteria 4975
134 Ga0495592_0004426 3300046454 Bacteria 10284
135 Ga0495590_0000002 3300046457 Bacteria 485720
136 Ga0495590_0017510 3300046457 Bacteria 2578
137 Ga0495638_0000072 3300046460 Bacteria 164926
138 Ga0495638_0062224 3300046460 Bacteria 2304
139 Ga0495653_0000023 3300046463 Bacteria 166207
140 Ga0495653_0018071 3300046463 Bacteria 5732
141 Ga0495650_0000019 3300046471 Bacteria 533849
142 Ga0495650_0000276 3300046471 Bacteria 98048
143 Ga0495650_0000530 3300046471 Bacteria 55501
144 Ga0495650_0000750 3300046471 Bacteria 40552
145 Ga0495650_0003011 3300046471 Bacteria 12715
146 Ga0495605_0000023 3300046474 Bacteria 236732
147 Ga0495605_0002813 3300046474 Bacteria 10578
148 Ga0495584_0002622 3300046491 Bacteria 10139
149 Ga0495584_0066249 3300046491 Bacteria 1816
150 Ga0495585_0000295 3300046492 Bacteria 50228
151 Ga0495585_0001862 3300046492 Bacteria 15940
152 Ga0495607_0002690 3300046501 Bacteria 14187
153 Ga0495607_0022011 3300046501 Bacteria 4008
154 Ga0495607_0081776 3300046501 Bacteria 1774
155 Ga0495583_0000014 3300046506 Bacteria 320136
156 Ga0495583_0000649 3300046506 Bacteria 45956
157 Ga0495583_0015803 3300046506 Bacteria 4087
158 Ga0495583_0023077 3300046506 Bacteria 3155
159 Ga0495606_0000526 3300046507 Bacteria 61953
160 Ga0495606_0000834 3300046507 Bacteria 46481
161 Ga0495606_0000931 3300046507 Bacteria 43141
162 Ga0495606_0002107 3300046507 Bacteria 24200
163 Ga0495606_0002724 3300046507 Bacteria 19910
164 Ga0495606_0018945 3300046507 Bacteria 5142
165 Ga0495606_0034097 3300046507 Bacteria 3499
166 Ga0495606_0055549 3300046507 Bacteria 2560
167 Ga0495608_0003485 3300046511 Bacteria 11272
168 Ga0495608_0044485 3300046511 Bacteria 2963
169 Ga0495610_0000012 3300046512 Bacteria 517442
170 Ga0495610_0007029 3300046512 Bacteria 7605
171 Ga0495610_0056695 3300046512 Bacteria 1882
172 Ga0495616_0008038 3300046513 Bacteria 6280
173 Ga0495618_0002094 3300046514 Bacteria 13070
174 Ga0495628_0004342 3300046516 Bacteria 12578
175 Ga0495628_0009907 3300046516 Bacteria 8114
176 Ga0495637_0002712 3300046520 Bacteria 9647
177 Ga0495643_0000312 3300046522 Bacteria 67022
178 Ga0495643_0001430 3300046522 Bacteria 22061
179 Ga0495643_0005671 3300046522 Bacteria 8366
180 Ga0495643_0026444 3300046522 Bacteria 3276
181 Ga0495644_0003051 3300046523 Bacteria 6629
182 Ga0495648_0000037 3300046524 Bacteria 195401
183 Ga0495648_0004223 3300046524 Bacteria 12329
184 Ga0495648_0038561 3300046524 Bacteria 3053
185 Ga0495663_0009719 3300046525 Bacteria 2669
186 Ga0495642_0002650 3300046528 Bacteria 7209
187 Ga0495642_0005885 3300046528 Bacteria 4702
188 Ga0495642_0015811 3300046528 Bacteria 2938
189 Ga0495642_0022902 3300046528 Bacteria 2463
190 Ga0495652_0007716 3300046529 Bacteria 9908
191 Ga0495652_0020077 3300046529 Bacteria 5943
192 Ga0495652_0114815 3300046529 Bacteria 2159
193 Ga0495654_0000015 3300046530 Bacteria 307873
194 Ga0495654_0028630 3300046530 Bacteria 2847
195 Ga0495609_0000334 3300046538 Bacteria 41567
196 Ga0495609_0001609 3300046538 Bacteria 14758
197 Ga0495609_0002817 3300046538 Bacteria 10437
198 Ga0495597_0001102 3300046542 Bacteria 20452
199 Ga0495597_0001837 3300046542 Bacteria 14516
200 Ga0495597_0008530 3300046542 Bacteria 5129
201 Ga0495645_0232539 3300046543 Bacteria 1234
202 Ga0495622_0000117 3300046557 Bacteria 68927
203 Ga0495622_0000917 3300046557 Bacteria 15985
204 Ga0495622_0040062 3300046557 Bacteria 2181
205 Ga0495633_0004770 3300046558 Bacteria 8504
206 Ga0495633_0007943 3300046558 Bacteria 6047
207 Ga0495633_0008601 3300046558 Bacteria 5734
208 Ga0495633_0010470 3300046558 Bacteria 5057
209 Ga0495633_0018600 3300046558 Bacteria 3526
210 Ga0495633_0018864 3300046558 Bacteria 3493
211 Ga0495633_0020697 3300046558 Bacteria 3303
212 Ga0495633_0085553 3300046558 Bacteria 1466
213 Ga0495668_0000028 3300046616 Bacteria 286629
214 Ga0495668_0000081 3300046616 Bacteria 157245
215 Ga0495668_0000170 3300046616 Bacteria 97074
216 Ga0495668_0001981 3300046616 Bacteria 17944
217 Ga0495668_0004324 3300046616 Bacteria 10154
218 Ga0495668_0007647 3300046616 Bacteria 6876
219 Ga0495668_0011635 3300046616 Bacteria 5261
220 Ga0495611_0099795 3300046648 Bacteria 1347
221 Ga0495625_0000738 3300046660 Bacteria 45725
222 Ga0495625_0003266 3300046660 Bacteria 16390
223 Ga0495625_0009669 3300046660 Bacteria 8038
224 Ga0495625_0010582 3300046660 Bacteria 7617
225 Ga0495625_0022042 3300046660 Bacteria 4891
226 Ga0495659_0000416 3300046664 Bacteria 16245
227 Ga0495659_0000608 3300046664 Bacteria 13187
228 Ga0495659_0000950 3300046664 Bacteria 10257
229 Ga0495661_0003851 3300046665 Bacteria 10971
230 Ga0495661_0049852 3300046665 Bacteria 2537
231 Ga0495661_0050252 3300046665 Bacteria 2525
232 Ga0495657_0030109 3300046675 Bacteria 3803
233 Ga0495599_0001173 3300046678 Bacteria 14856
234 Ga0495623_0003819 3300046679 Bacteria 9934
235 Ga0495646_0008911 3300046680 Bacteria 6371
236 Ga0495646_0013061 3300046680 Bacteria 5278
237 Ga0495669_0000702 3300046684 Bacteria 14615
238 Ga0495624_0008209 3300046690 Bacteria 7301
239 Ga0495624_0022420 3300046690 Bacteria 4174
240 Ga0495670_0027450 3300046691 Bacteria 2820
241 Ga0495670_0091713 3300046691 Bacteria 1555
242 Ga0495671_0000006 3300046692 Bacteria 500471
243 Ga0495671_0001379 3300046692 Bacteria 16473
244 Ga0495649_0028873 3300046694 Bacteria 3074
245 Ga0495649_0038280 3300046694 Bacteria 2632
246 Ga0495660_0000365 3300046810 Bacteria 39810
247 Ga0495660_0001433 3300046810 Bacteria 16341
248 Ga0495636_0006407 3300047318 Bacteria 4624
249 Ga0495672_0000707 3300047320 Bacteria 36700
250 Ga0495672_0002653 3300047320 Bacteria 16145
251 Ga0495683_0003651 3300047323 Bacteria 8919
252 Ga0495687_000904 3300047443 Bacteria 31028
253 Ga0495687_002164 3300047443 Bacteria 16384
254 Ga0495687_006675 3300047443 Bacteria 7009
255 Ga0495687_014015 3300047443 Bacteria 4148
256 Ga0495687_014020 3300047443 Bacteria 4147
257 Ga0495677_0004677 3300047445 Bacteria 5219
258 Ga0495679_009194 3300047446 Bacteria 3971
259 Ga0495685_000020 3300047447 Bacteria 73280
260 Ga0495685_001376 3300047447 Bacteria 7448
261 Ga0495673_0000003 3300047469 Bacteria 1491337
262 Ga0495673_0000061 3300047469 Bacteria 230647
263 Ga0495673_0000482 3300047469 Bacteria 42471
264 Ga0495673_0020979 3300047469 Bacteria 3238
265 Ga0495681_0002304 3300047470 Bacteria 13735
266 Ga0495681_0023692 3300047470 Bacteria 3254
267 Ga0495686_0000730 3300047472 Bacteria 43990
268 Ga0495686_0001089 3300047472 Bacteria 32267
269 Ga0495686_0014478 3300047472 Bacteria 5425
270 Ga0495686_0070090 3300047472 Bacteria 2160
271 Ga0495602_0099916 3300048088 Bacteria 2384
272 Ga0495602_0105637 3300048088 Bacteria 2300
273 Ga0495615_0009172 3300048090 Bacteria 1937
274 Ga0495626_0000038 3300048091 Bacteria 175936
275 Ga0496102_0006926 3300048905 Bacteria 9670
276 Ga0496102_0010217 3300048905 Bacteria 8068
277 Ga0496103_0011538 3300048906 Bacteria 5237
278 Ga0496103_0038299 3300048906 Bacteria 2941
279 Ga0496105_0036801 3300048908 Bacteria 4033
280 Ga0496107_0070628 3300048910 Bacteria 2536
281 Ga0496108_0044997 3300048911 Bacteria 3685
282 Ga0496110_0090200 3300048913 Bacteria 2741
283 Ga0496111_0010547 3300048914 Bacteria 6208
284 Ga0496111_0039647 3300048914 Bacteria 3378
285 Ga0496116_0091204 3300048919 Bacteria 1852
286 Ga0496117_0000094 3300048920 Bacteria 201853
287 Ga0496118_0000071 3300048921 Bacteria 201853
288 Ga0496120_0066265 3300048923 Bacteria 1998
289 Ga0496121_0024621 3300048924 Bacteria 5748
290 Ga0496121_0060792 3300048924 Bacteria 3105
291 Ga0496122_0003123 3300048925 Bacteria 22187
292 Ga0496123_0002748 3300048926 Bacteria 21045
293 Ga0496123_0005868 3300048926 Bacteria 12162
294 Ga0496124_0036523 3300048927 Bacteria 4284
295 Ga0496124_0053009 3300048927 Bacteria 3442
296 Ga0496125_0001032 3300048928 Bacteria 43195
297 Ga0496125_0049872 3300048928 Bacteria 3472
298 Ga0496126_0018996 3300048929 Bacteria 6787
299 Ga0496126_0062409 3300048929 Bacteria 3344
300 Ga0495678_000030 3300049459 Bacteria 217986
301 Ga0495678_001453 3300049459 Bacteria 18626
302 Ga0495678_001785 3300049459 Bacteria 15917
303 Ga0495682_0030729 3300049460 Bacteria 1986
304 Ga0501269_000119 3300049766 Bacteria 24695
305 nmdc:mga03683_7790_c1 3300050489 Bacteria 3735
306 nmdc:mga00v17_20254_c1 3300050491 Bacteria 3808
307 nmdc:mga0k408_3862_c1 3300050493 Bacteria 4966
308 nmdc:mga08y16_35609_c1 3300050511 Bacteria 5227
309 nmdc:mga08y16_57646_c1 3300050511 Bacteria 4058
310 Ga0495601_0004306 3300053077 Bacteria 8220
311 Ga0500595_006451 3300053119 Bacteria 4974
312 Ga0500618_000747 3300053125 Bacteria 18449
313 Ga0500618_003346 3300053125 Bacteria 5542
314 Ga0500618_005476 3300053125 Bacteria 3850
315 Ga0500586_000378 3300053145 Bacteria 8868
316 Ga0500586_009638 3300053145 Bacteria 2688
317 Ga0500619_000188 3300053154 Bacteria 14568
318 2904425422 2904424332 Bacteria 7633521
319 2511386661 2511231026 Bacteria 5225445
320 2521558143 2521172590 Bacteria 5047645
321 2553003268 2551306416 Bacteria 6152985
322 2601669122 2600255292 Bacteria 6300551
323 2644027268 2643221603 Bacteria 6147767
324 2644253593 2643221645 Bacteria 7207331
325 2644355368 2643221664 Bacteria 7272945
326 2738737529 2738541280 Bacteria 6630198
327 2738830208 2738541297 Bacteria 6549566
328 2738841720 2738541300 Bacteria 6675882
329 2739154004 2738541357 Bacteria 6549408
330 2739195924 2738543003 Bacteria 6549560
331 2739272592 2738543018 Bacteria 6718814
332 2739322400 2738543026 Bacteria 6549408
333 2739340641 2738543029 Bacteria 6549249
334 2739341636 2738543030 Bacteria 6719714
335 2739612658 2739367655 Bacteria 4051151
336 2765569276 2765235838 Bacteria 5445269
337 2808983859 2808606386 Bacteria 4471946
338 2809130919 2808606415 Bacteria 4576710
339 2809150746 2808606419 Bacteria 4576925
340 2819614714 2818991449 Bacteria 5518009
341 2821132118 2821131069 Bacteria 6108407
342 2839095838 2839094727 Bacteria 5534556
343 2842712629 2842711865 Bacteria 7155354
344 2852622264 2852618963 Bacteria 4577824
345 2857551290 2857547612 Bacteria 6179999
346 2857557619 2857553236 Bacteria 6166726
347 2857561001 2857558681 Bacteria 6617694
348 2857568436 2857564685 Bacteria 6290584
349 2881928345 2881927736 Bacteria 3993927
350 2885084063 2885080285 Bacteria 6355622
351 2887379440 2887375801 Bacteria 5334027
352 2895516573 2895511927 Bacteria 6802080
353 2904441083 2904439833 Bacteria 5931679
354 2904531974 2904530477 Bacteria 5876334
355 2904587800 2904584206 Bacteria 6028872
356 2904590040 2904589729 Bacteria 6113573
357 2904602572 2904601388 Bacteria 5884906
358 2919046606 2919046199 Bacteria 5567169
359 2919079922 2919079590 Bacteria 5946433
360 2919477327 2919476304 Bacteria 5888696
361 2923511391 2923510766 Bacteria 5926163
362 2928131322 2928130867 Bacteria 5467269
363 2932416402 2932410948 Bacteria 6312192
364 2932417197 2932416698 Bacteria 6315112
365 8002394447 8002392321 Bacteria 4159911
366 8055228142 8055225921 Bacteria 3341787
367 JGI25162J39368_1000001
368 JGI25154J39366_1000727
369 JGI25165J46597_1000001
370 rootH1_10031553
371 Ga0055538_1000001
372 Ga0055538_1000002
373 Ga0055539_1000001
374 Ga0055539_1000002
375 Ga0055533_1000003
376 Ga0055533_1000004
377 Ga0055525_1000002
378 Ga0055525_1000003
379 Ga0055529_1000138
380 Ga0055526_1000360
381 Ga0055526_1000373
382 Ga0055526_1001922
383 Ga0055537_1001518
384 Ga0055524_1000010
385 Ga0055524_1008333
386 Ga0055534_1000314
387 Ga0055528_1000127
388 Ga0055541_1000001
389 Ga0055541_1000002
390 Ga0055543_1007886
391 Ga0065165_1000007
392 Ga0070682_100028508
393 Ga0070660_100000942
394 Ga0070659_100008854
395 Ga0068855_100001340
396 Ga0068855_100070446
397 Ga0070664_100021533
398 Ga0068854_100000993
399 Ga0075364_10080586
400 Ga0075362_10024808
401 Ga0075366_10013882
402 Ga0099826_10000002
403 Ga0105244_10005718
404 Ga0111539_10005602
405 Ga0105242_10186490
406 Ga0105237_10044600
407 Ga0105238_10012599
408 Ga0105239_10107916
409 Ga0105239_10314457
410 Ga0157371_10000040
411 Ga0182008_10005984
412 Ga0157376_10065503
413 Ga0182006_1000043
414 Ga0182006_1000112
415 Ga0182006_1002767
416 Ga0182006_1009230
417 Ga0182007_10000020
418 Ga0182007_10005189
419 Ga0182005_1000001
420 Ga0182005_1000037
421 Ga0163161_10038971
422 Ga0213872_10000001
423 Ga0213872_10005667
424 Ga0209784_100002
425 Ga0209784_100004
426 Ga0209566_100003
427 Ga0209566_100004
428 Ga0209674_100004
429 Ga0209674_100006
430 Ga0209563_100006
431 Ga0209563_100009
432 Ga0207427_101388
433 Ga0209437_100004
434 Ga0209646_1000522
435 Ga0209677_100003
436 Ga0209677_100005
437 Ga0209233_1000005
438 Ga0209565_1000202
439 Ga0209455_1000043
440 Ga0209673_1000007
441 Ga0209130_1000156
442 Ga0209675_1000009
443 Ga0209025_1001761
444 Ga0209564_1000011
445 Ga0209564_1000089
446 Ga0209564_1000203
447 Ga0209758_1000286
448 Ga0209256_1000007
449 Ga0209256_1003915
450 Ga0207655_1007036
451 Ga0207695_10005150
452 Ga0207671_10030617
453 Ga0207657_10002268
454 Ga0207694_10001629
455 Ga0207690_10038945
456 Ga0207665_10027036
457 Ga0207679_10001663
458 Ga0207667_10000036
459 Ga0207667_10036551
460 Ga0209281_1004662
461 Ga0209282_1000001
462 Ga0207428_10080644
463 Ga0307509_10000815
464 Ga0307408_100000269
465 Ga0316575_10000678
466 Ga0265314_10007981
467 Ga0373939_0017394
468 Ga0395899_0002338
469 Ga0395899_0005813
470 Ga0395899_0009322
471 Ga0395900_0011176
472 Ga0395900_0067605
473 Ga0395900_0118718
474 Ga0395898_0012245
475 Ga0395905_0004238
476 Ga0395905_0006310
477 Ga0395901_0000482
478 Ga0395901_0024592
479 Ga0436361_0075458
480 Ga0436361_0606507
481 Ga0451577_0001801
482 Ga0451577_0075548
483 Ga0466972_0000060
484 Ga0466965_0044901
485 Ga0466965_0077268
486 Ga0466966_0025802
487 Ga0466964_0066420
488 Ga0453684_0000005
489 Ga0453684_0000280
490 Ga0453684_0000379
491 Ga0453684_0000512
492 Ga0466970_0077422
493 Ga0451576_0000461
494 Ga0451576_0012893
495 Ga0451576_0017637
496 Ga0495617_000062
497 Ga0495617_001638
498 Ga0495627_000059
499 Ga0495627_005696
500 Ga0495592_0004426
501 Ga0495590_0000002
502 Ga0495590_0017510
503 Ga0495638_0000072
504 Ga0495638_0062224
505 Ga0495653_0000023
506 Ga0495653_0018071
507 Ga0495650_0000019
508 Ga0495650_0000276
509 Ga0495650_0000530
510 Ga0495650_0000750
511 Ga0495650_0003011
512 Ga0495605_0000023
513 Ga0495605_0002813
514 Ga0495584_0002622
515 Ga0495584_0066249
516 Ga0495585_0000295
517 Ga0495585_0001862
518 Ga0495607_0002690
519 Ga0495607_0022011
520 Ga0495607_0081776
521 Ga0495583_0000014
522 Ga0495583_0000649
523 Ga0495583_0015803
524 Ga0495583_0023077
525 Ga0495606_0000526
526 Ga0495606_0000834
527 Ga0495606_0000931
528 Ga0495606_0002107
529 Ga0495606_0002724
530 Ga0495606_0018945
531 Ga0495606_0034097
532 Ga0495606_0055549
533 Ga0495608_0003485
534 Ga0495608_0044485
535 Ga0495610_0000012
536 Ga0495610_0007029
537 Ga0495610_0056695
538 Ga0495616_0008038
539 Ga0495618_0002094
540 Ga0495628_0004342
541 Ga0495628_0009907
542 Ga0495637_0002712
543 Ga0495643_0000312
544 Ga0495643_0001430
545 Ga0495643_0005671
546 Ga0495643_0026444
547 Ga0495644_0003051
548 Ga0495648_0000037
549 Ga0495648_0004223
550 Ga0495648_0038561
551 Ga0495663_0009719
552 Ga0495642_0002650
553 Ga0495642_0005885
554 Ga0495642_0015811
555 Ga0495642_0022902
556 Ga0495652_0007716
557 Ga0495652_0020077
558 Ga0495652_0114815
559 Ga0495654_0000015
560 Ga0495654_0028630
561 Ga0495609_0000334
562 Ga0495609_0001609
563 Ga0495609_0002817
564 Ga0495597_0001102
565 Ga0495597_0001837
566 Ga0495597_0008530
567 Ga0495645_0232539
568 Ga0495622_0000117
569 Ga0495622_0000917
570 Ga0495622_0040062
571 Ga0495633_0004770
572 Ga0495633_0007943
573 Ga0495633_0008601
574 Ga0495633_0010470
575 Ga0495633_0018600
576 Ga0495633_0018864
577 Ga0495633_0020697
578 Ga0495633_0085553
579 Ga0495668_0000028
580 Ga0495668_0000081
581 Ga0495668_0000170
582 Ga0495668_0001981
583 Ga0495668_0004324
584 Ga0495668_0007647
585 Ga0495668_0011635
586 Ga0495611_0099795
587 Ga0495625_0000738
588 Ga0495625_0003266
589 Ga0495625_0009669
590 Ga0495625_0010582
591 Ga0495625_0022042
592 Ga0495659_0000416
593 Ga0495659_0000608
594 Ga0495659_0000950
595 Ga0495661_0003851
596 Ga0495661_0049852
597 Ga0495661_0050252
598 Ga0495657_0030109
599 Ga0495599_0001173
600 Ga0495623_0003819
601 Ga0495646_0008911
602 Ga0495646_0013061
603 Ga0495669_0000702
604 Ga0495624_0008209
605 Ga0495624_0022420
606 Ga0495670_0027450
607 Ga0495670_0091713
608 Ga0495671_0000006
609 Ga0495671_0001379
610 Ga0495649_0028873
611 Ga0495649_0038280
612 Ga0495660_0000365
613 Ga0495660_0001433
614 Ga0495636_0006407
615 Ga0495672_0000707
616 Ga0495672_0002653
617 Ga0495683_0003651
618 Ga0495687_000904
619 Ga0495687_002164
620 Ga0495687_006675
621 Ga0495687_014015
622 Ga0495687_014020
623 Ga0495677_0004677
624 Ga0495679_009194
625 Ga0495685_000020
626 Ga0495685_001376
627 Ga0495673_0000003
628 Ga0495673_0000061
629 Ga0495673_0000482
630 Ga0495673_0020979
631 Ga0495681_0002304
632 Ga0495681_0023692
633 Ga0495686_0000730
634 Ga0495686_0001089
635 Ga0495686_0014478
636 Ga0495686_0070090
637 Ga0495602_0099916
638 Ga0495602_0105637
639 Ga0495615_0009172
640 Ga0495626_0000038
641 Ga0496102_0006926
642 Ga0496102_0010217
643 Ga0496103_0011538
644 Ga0496103_0038299
645 Ga0496105_0036801
646 Ga0496107_0070628
647 Ga0496108_0044997
648 Ga0496110_0090200
649 Ga0496111_0010547
650 Ga0496111_0039647
651 Ga0496116_0091204
652 Ga0496117_0000094
653 Ga0496118_0000071
654 Ga0496120_0066265
655 Ga0496121_0024621
656 Ga0496121_0060792
657 Ga0496122_0003123
658 Ga0496123_0002748
659 Ga0496123_0005868
660 Ga0496124_0036523
661 Ga0496124_0053009
662 Ga0496125_0001032
663 Ga0496125_0049872
664 Ga0496126_0018996
665 Ga0496126_0062409
666 Ga0495678_000030
667 Ga0495678_001453
668 Ga0495678_001785
669 Ga0495682_0030729
670 Ga0501269_000119
671 nmdc:mga03683_7790_c1
672 nmdc:mga00v17_20254_c1
673 nmdc:mga0k408_3862_c1
674 nmdc:mga08y16_35609_c1
675 nmdc:mga08y16_57646_c1
676 Ga0495601_0004306
677 Ga0500595_006451
678 Ga0500618_000747
679 Ga0500618_003346
680 Ga0500618_005476
681 Ga0500586_000378
682 Ga0500586_009638
683 Ga0500619_000188
684 2904425422
685 2511386661
686 2521558143
687 2553003268
688 2601669122
689 2644027268
690 2644253593
691 2644355368
692 2738737529
693 2738830208
694 2738841720
695 2739154004
696 2739195924
697 2739272592
698 2739322400
699 2739340641
700 2739341636
701 2739612658
702 2765569276
703 2808983859
704 2809130919
705 2809150746
706 2819614714
707 2821132118
708 2839095838
709 2842712629
710 2852622264
711 2857551290
712 2857557619
713 2857561001
714 2857568436
715 2881928345
716 2885084063
717 2887379440
718 2895516573
719 2904441083
720 2904531974
721 2904587800
722 2904590040
723 2904602572
724 2919046606
725 2919079922
726 2919477327
727 2923511391
728 2928131322
729 2932416402
730 2932417197
731 8002394447
732 8055228142

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02163

Peptidase_M50

Peptidase family M50

5

462

0.98

PF17820

PDZ_6

PDZ domain

249

302

0.98

PF13180

PDZ_2

PDZ domain

161

220

0.92

PF13180

PDZ_2

PDZ domain

237

312

0.9

PF17820

PDZ_6

PDZ domain

162

211

0.83

PF00595

PDZ

PDZ domain

229

301

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xft-assembly1.cif.gz_A-2 mucp pdz2 domain 0.9612 228 312
3id2-assembly1.cif.gz_B crystal structure of rsep pdz2 domain 0.9553 229 316
7xft-assembly1.cif.gz_A-2 mucp pdz2 domain 0.9397 228 312
7w71-assembly2.cif.gz_A crystal structure of the pdz-c domain of e. coli rsep in complex with 12c7 fab 0.9355 230 316
3id2-assembly1.cif.gz_B crystal structure of rsep pdz2 domain 0.9248 229 316
ID Description Score Start End Superfamily
2zpmA00 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9303 232 314 2.30.42.10
af_Q9VFJ3_320_421_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9295 232 297 2.30.42.10
af_Q2FZP2_674_769_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9159 232 295 2.30.42.10
5t63A02 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9143 232 295 2.30.42.10
3id3B00 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9088 229 316 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A0B2C669-F1-model_v4 deleted 0.9789 323 453
AF-A0A836P347-F1-model_v4 Zinc metalloprotease 0.9693 330 453 GO:0004222
GO:0006508
GO:0016020
AF-A0A3C1TND1-F1-model_v4 RIP metalloprotease RseP 0.9599 320 455 GO:0004222
GO:0006508
GO:0016020
AF-A0A2M7Y960-F1-model_v4 RIP metalloprotease RseP 0.9555 320 452 GO:0004222
GO:0006508
GO:0016020
AF-A0A3N9V2B2-F1-model_v4 RIP metalloprotease RseP 0.9506 6 119 GO:0004222
GO:0006508
GO:0016020

Map