F424145

General Info

Members Datasets Scaffolds Average Seq Length
366 218 270 1002

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0010481|Ga0501032_0010481_3151_6597
Length 1101
Sequence MFLIAHSWFSFKYGILSPQALLEEAAEVGVRTLALTDIHNTAGIPDFVRLAGDHGIRPVAGIEFRPLRPSSGRQILYIGLAKNNNGFQQLNELLSPHLLDDEALPEEPPELADAFFILPFSTPPRTLHPNERIGIKPSELTRLPFSPWAKRLKDLVALLPATFRGKQDFNTHRLLRTMAKNTLISLLPAEELADPDDRFRSEEEVRRIYRDFPQLLCNTEHLLEQCSIVFDGSDKTRKVFGTSLALDRERLHRDTLDGLHRRYPQATDKVVARMQHELDVIERMGFISYFLINQDIVRHARSRGFFHVGRGSGANSLVAYCLGITDVDPIELNLYFERFISTARKKPPDFDIDFSWKDRDEVYRYVFAKYNAPPDPSRASGSGGATGIHAAQVATYTTFQWRGAVRELGKAVGLPPEEIDALSEGRSRYGGGRPSAQANSGGLDKVAQAVVRYANRLIGMPHQFGIHVGGIVITDKPVTHYGALFRPPKGFPVVQLSLLECEDLGLHKFDILSQRGLGHIRDAVELVRGRQLSVVSCPGTPNNEQRSDIHNIPAFKQDPAIKELLRTGDTVGCFYVESPAMRMLLKKLRVEDYLTLVAASSIIRPGVAESGMMREYILRHNDPERVKRAPRELLEIMPETYGVMVYQEDVLKVAHLYAGLDLEEADLLRRGMTARFRERPEFKAVQEKFFANCKAMGRPPGQAEEVWRQIESFASFSFAKGHSASYAVESYQSLWLKAHHPLEFMVAVANNFGGFYSLEFYLHEARRHGAVIEAPCVNVSGELCLLVRGKGCQLSVASCRGTPGQRLTTENRQLTSNNHEPRAIPRIYLGLANIKSLTAETVQLILHERRRHGLFHDLEDLLHRVPLPLEQARILVRTGALRFTGKSKPQLLWDLTLLHKPASITADGDLFITKVEEPVLPALYHYPLADAYDELELLGFPLGDPFSLVEGEELTRRREDAKDEGLPPRHQARQEMPHAKDVDSCRLSVVRAASDNLPKTILKHDMPRHIGKRVTMLGYMVHVKPASTRTGEWMSFGSFIDTAGELWDSTQFPAVAARYPFRGRGVYRLTGVVEEEFGHCSLRTQALEKLPWRADPRYGAT

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
3 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
4 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
5 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
6 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
7 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
8 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
9 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
10 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
11 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
12 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
13 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
14 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
15 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
16 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
17 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
18 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
19 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
20 2738541278 Niastella sp. CF465 Isolate Unclassified
21 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
22 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
23 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
24 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
25 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
26 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
27 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
28 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
29 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
30 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
31 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
32 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
33 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
34 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
35 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
36 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
37 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
38 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
39 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
40 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
41 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
42 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
43 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
44 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
45 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
46 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
47 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
48 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
49 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
50 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
51 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
52 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
53 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
54 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
55 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
56 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
57 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
58 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
59 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
60 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
61 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
62 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
63 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
64 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
65 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
66 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
67 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
68 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
69 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
70 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
71 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
72 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
73 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
74 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
75 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
76 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
77 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
78 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
79 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
80 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
81 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
82 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
83 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
84 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
85 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
86 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
87 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
88 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
89 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
90 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
91 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
92 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
93 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
94 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
95 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
96 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
97 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
98 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
99 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
100 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
101 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
102 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
103 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
104 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
105 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
106 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
107 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
108 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
109 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
110 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
111 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
112 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
113 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
114 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
115 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
116 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
117 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
118 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
119 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
121 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
122 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
143 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
144 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
145 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
148 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
149 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
150 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
151 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
152 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
153 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
154 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
155 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
156 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
157 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
158 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
159 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
160 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
161 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
162 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
163 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
164 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
165 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
166 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
167 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
168 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
169 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
170 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
171 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
172 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
173 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
174 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
175 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
176 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
177 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
178 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
179 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
180 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
181 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
182 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
183 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
184 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
185 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
190 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
193 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
197 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
198 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
199 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
200 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
201 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
202 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
203 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
204 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
205 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
206 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
207 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
208 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
209 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
210 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
211 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
212 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
213 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
214 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
215 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
216 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere
217 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
218 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.32
Metatranscriptomes 0
Isolates 25.68

Biome Distribution

Category Percentage (%)
Aerial Root 0.55
Bulb 0
Endosphere 4.37
Nodule 3.28
Rhizoplane 0
Rhizosphere 72.95
Stem 0
Stem Tuber 0
Unclassified 18.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2732696 2162886007 Bacteria 84561
2 JGI25162J39368_1000005 3300002737 Bacteria 435925
3 rootH1_10021603 3300003316 Bacteria 11809
4 rootH2_10001223 3300003320 Bacteria 131149
5 rootH2_10009245 3300003320 Bacteria 27016
6 rootL2_10080212 3300003322 Bacteria 9510
7 rootH1_10118542 3300003323 Bacteria 8417
8 rootH1_10146560 3300003323 Bacteria 5109
9 rootH1_10166389 3300003323 Bacteria 18109
10 Ga0065165_1000037 3300005262 Bacteria 212166
11 Ga0065714_10008784 3300005288 Bacteria 6680
12 Ga0065714_10064709 3300005288 Bacteria 22067
13 Ga0065714_10067385 3300005288 Bacteria 5572
14 Ga0065704_10000205 3300005289 Bacteria 128899
15 Ga0065704_10000221 3300005289 Bacteria 134976
16 Ga0065704_10070692 3300005289 Bacteria 17613
17 Ga0065712_10069588 3300005290 Bacteria 7005
18 Ga0070683_100005488 3300005329 Bacteria 10594
19 Ga0070666_10000040 3300005335 Bacteria 114115
20 Ga0070682_100000231 3300005337 Bacteria 40458
21 Ga0070682_100000493 3300005337 Bacteria 24795
22 Ga0070660_100004792 3300005339 Bacteria 9356
23 Ga0070660_100026841 3300005339 Bacteria 4291
24 Ga0070661_100012795 3300005344 Bacteria 5876
25 Ga0070669_100012134 3300005353 Bacteria 6115
26 Ga0070678_100011123 3300005456 Bacteria 5536
27 Ga0070679_100000366 3300005530 Bacteria 38459
28 Ga0070684_100011572 3300005535 Bacteria 7031
29 Ga0070672_100008120 3300005543 Bacteria 7173
30 Ga0070693_100005293 3300005547 Bacteria 6184
31 Ga0070665_100000094 3300005548 Bacteria 171072
32 Ga0068855_100041837 3300005563 Bacteria 5430
33 Ga0068855_100045371 3300005563 Bacteria 5199
34 Ga0068854_100023877 3300005578 Bacteria 4180
35 Ga0068852_100010522 3300005616 Bacteria 6918
36 Ga0068859_100000436 3300005617 Bacteria 41890
37 Ga0068859_100007737 3300005617 Bacteria 10909
38 Ga0068851_10000034 3300005834 Bacteria 107262
39 Ga0068863_100000330 3300005841 Bacteria 48073
40 Ga0068858_100000316 3300005842 Bacteria 51458
41 Ga0068860_100000052 3300005843 Bacteria 207351
42 Ga0068860_100006079 3300005843 Bacteria 12149
43 Ga0068860_100022615 3300005843 Bacteria 6079
44 Ga0097620_100000436 3300006931 Bacteria 41890
45 Ga0097620_100007737 3300006931 Bacteria 10909
46 Ga0099824_1000172 3300006942 Bacteria 59875
47 Ga0099824_1003521 3300006942 Bacteria 22863
48 Ga0079104_1000005 3300006946 Bacteria 407099
49 Ga0079104_1000023 3300006946 Bacteria 219954
50 Ga0079104_1000154 3300006946 Bacteria 97194
51 Ga0099826_10014353 3300006948 Bacteria 5981
52 Ga0105244_10000035 3300009036 Bacteria 168428
53 Ga0105244_10001529 3300009036 Bacteria 18465
54 Ga0105240_10000731 3300009093 Bacteria 60044
55 Ga0105240_10001035 3300009093 Bacteria 49456
56 Ga0105240_10005676 3300009093 Bacteria 18525
57 Ga0105243_10000004 3300009148 Bacteria 601266
58 Ga0105243_10000104 3300009148 Bacteria 96700
59 Ga0105241_10000562 3300009174 Bacteria 28062
60 Ga0105241_10001692 3300009174 Bacteria 16760
61 Ga0105241_10005166 3300009174 Bacteria 9631
62 Ga0105237_10001041 3300009545 Bacteria 37233
63 Ga0105237_10002222 3300009545 Bacteria 24283
64 Ga0105237_10009995 3300009545 Bacteria 10124
65 Ga0105237_10019830 3300009545 Bacteria 6942
66 Ga0105238_10014520 3300009551 Bacteria 7964
67 Ga0105249_10012105 3300009553 Bacteria 7593
68 Ga0105239_10002653 3300010375 Bacteria 22567
69 Ga0105239_10003540 3300010375 Bacteria 19098
70 Ga0105239_10004337 3300010375 Bacteria 16995
71 Ga0105246_10000147 3300011119 Bacteria 33197
72 Ga0157373_10000002 3300013100 Bacteria 750094
73 Ga0157373_10000008 3300013100 Bacteria 216306
74 Ga0157373_10000154 3300013100 Bacteria 55480
75 Ga0157373_10002052 3300013100 Bacteria 15260
76 Ga0157371_10000081 3300013102 Bacteria 151138
77 Ga0157371_10000255 3300013102 Bacteria 74280
78 Ga0157371_10000433 3300013102 Bacteria 51401
79 Ga0157371_10001655 3300013102 Bacteria 22727
80 Ga0157371_10021614 3300013102 Bacteria 4722
81 Ga0157371_10039291 3300013102 Bacteria 3383
82 Ga0157370_10000068 3300013104 Bacteria 113329
83 Ga0157370_10000153 3300013104 Bacteria 84822
84 Ga0157370_10000191 3300013104 Bacteria 76405
85 Ga0157370_10000375 3300013104 Bacteria 56144
86 Ga0157370_10001449 3300013104 Bacteria 29363
87 Ga0157370_10001543 3300013104 Bacteria 28500
88 Ga0157370_10002528 3300013104 Bacteria 21985
89 Ga0157370_10004295 3300013104 Bacteria 16400
90 Ga0157370_10006472 3300013104 Bacteria 12914
91 Ga0157370_10008252 3300013104 Bacteria 11242
92 Ga0157370_10009911 3300013104 Bacteria 10094
93 Ga0157369_10000575 3300013105 Bacteria 48226
94 Ga0157369_10002137 3300013105 Bacteria 23838
95 Ga0157369_10003252 3300013105 Bacteria 19344
96 Ga0163162_10003197 3300013306 Bacteria 15670
97 Ga0163162_10046097 3300013306 Bacteria 4370
98 Ga0157372_10052462 3300013307 Bacteria 4541
99 Ga0157375_10000460 3300013308 Bacteria 37011
100 Ga0182008_10000005 3300014497 Bacteria 386556
101 Ga0182008_10001074 3300014497 Bacteria 18868
102 Ga0182008_10003182 3300014497 Bacteria 10040
103 Ga0182006_1000100 3300015261 Bacteria 97114
104 Ga0182006_1000195 3300015261 Bacteria 62545
105 Ga0182006_1000668 3300015261 Bacteria 24095
106 Ga0182006_1005192 3300015261 Bacteria 6244
107 Ga0182005_1001603 3300015265 Bacteria 8864
108 Ga0163161_10000009 3300017792 Bacteria 287918
109 Ga0163161_10000543 3300017792 Bacteria 30624
110 Ga0163161_10048251 3300017792 Bacteria 3075
111 Ga0209437_100043 3300025233 Bacteria 440454
112 Ga0209675_1000066 3300025291 Bacteria 171883
113 Ga0209675_1000088 3300025291 Bacteria 147320
114 Ga0209675_1000279 3300025291 Bacteria 48782
115 Ga0209564_1000127 3300025295 Bacteria 196942
116 Ga0209758_1000615 3300025297 Bacteria 55034
117 Ga0207656_10000027 3300025321 Bacteria 86479
118 Ga0207655_1000008 3300025728 Bacteria 734289
119 Ga0207655_1001342 3300025728 Bacteria 23120
120 Ga0207680_10000058 3300025903 Bacteria 50771
121 Ga0207647_10003551 3300025904 Bacteria 11705
122 Ga0207645_10000198 3300025907 Bacteria 49061
123 Ga0207645_10009417 3300025907 Bacteria 6756
124 Ga0207654_10002655 3300025911 Bacteria 9077
125 Ga0207654_10006560 3300025911 Bacteria 5852
126 Ga0207695_10000702 3300025913 Bacteria 65628
127 Ga0207695_10001770 3300025913 Bacteria 34103
128 Ga0207671_10000209 3300025914 Bacteria 88622
129 Ga0207671_10002321 3300025914 Bacteria 20528
130 Ga0207671_10002557 3300025914 Bacteria 19312
131 Ga0207671_10002938 3300025914 Bacteria 17562
132 Ga0207652_10000043 3300025921 Bacteria 128581
133 Ga0207652_10002370 3300025921 Bacteria 15931
134 Ga0207652_10002751 3300025921 Bacteria 14771
135 Ga0207652_10004213 3300025921 Bacteria 11741
136 Ga0207709_10000010 3300025935 Bacteria 601305
137 Ga0207709_10000144 3300025935 Bacteria 98895
138 Ga0207689_10001133 3300025942 Bacteria 25688
139 Ga0207661_10002141 3300025944 Bacteria 13593
140 Ga0207667_10004337 3300025949 Bacteria 17368
141 Ga0207640_10016955 3300025981 Bacteria 4251
142 Ga0207703_10000493 3300026035 Bacteria 40997
143 Ga0207641_10000051 3300026088 Bacteria 174706
144 Ga0207648_10004185 3300026089 Bacteria 14911
145 Ga0207676_10033844 3300026095 Unclassified 3865
146 Ga0207674_10017449 3300026116 Bacteria 7832
147 Ga0207683_10003678 3300026121 Bacteria 13323
148 Ga0209281_1000037 3300027111 Bacteria 368555
149 Ga0209281_1000094 3300027111 Bacteria 238155
150 Ga0209281_1000158 3300027111 Bacteria 162280
151 Ga0209489_106209 3300027361 Bacteria 19526
152 Ga0209282_1010175 3300027666 Bacteria 5949
153 Ga0268266_10000057 3300028379 Bacteria 284777
154 Ga0268264_10000143 3300028381 Bacteria 170031
155 Ga0268264_10017375 3300028381 Bacteria 5892
156 Ga0265323_10000635 3300028653 Bacteria 19202
157 Ga0265316_10004615 3300031344 Bacteria 13664
158 Ga0265316_10005999 3300031344 Bacteria 11687
159 Ga0307408_100000130 3300031548 Bacteria 83482
160 Ga0307516_10001788 3300031730 Bacteria 29542
161 Ga0307405_10000021 3300031731 Bacteria 155876
162 Ga0307413_10000228 3300031824 Bacteria 16574
163 Ga0307410_10000216 3300031852 Bacteria 21781
164 Ga0307406_10000039 3300031901 Bacteria 76207
165 Ga0307412_10000090 3300031911 Bacteria 81466
166 Ga0307414_10000001 3300032004 Bacteria 1352954
167 Ga0307414_10000002 3300032004 Bacteria 623006
168 Ga0307414_10000104 3300032004 Bacteria 60113
169 Ga0307414_10000133 3300032004 Bacteria 51805
170 Ga0307414_10000221 3300032004 Bacteria 37491
171 Ga0307414_10000264 3300032004 Bacteria 32949
172 Ga0307414_10000340 3300032004 Bacteria 26433
173 Ga0307414_10000348 3300032004 Bacteria 25887
174 Ga0307414_10002950 3300032004 Bacteria 8991
175 Ga0307414_10002967 3300032004 Bacteria 8975
176 Ga0307414_10003816 3300032004 Bacteria 8102
177 Ga0307414_10011910 3300032004 Bacteria 5124
178 Ga0307411_10000001 3300032005 Bacteria 931810
179 Ga0307411_10000004 3300032005 Bacteria 460327
180 Ga0307411_10000010 3300032005 Bacteria 238134
181 Ga0395900_0020664 3300037418 Bacteria 6728
182 Ga0395898_0012127 3300037466 Bacteria 8919
183 Ga0395905_0000515 3300037471 Bacteria 52918
184 Ga0395905_0000795 3300037471 Bacteria 41432
185 Ga0395901_0001357 3300038443 Bacteria 25621
186 Ga0395901_0027547 3300038443 Bacteria 5840
187 Ga0439447_002095 3300041407 Bacteria 7323
188 Ga0439447_002140 3300041407 Bacteria 7241
189 Ga0439447_002701 3300041407 Bacteria 6420
190 Ga0466969_0000101 3300044656 Bacteria 45511
191 Ga0466972_0000013 3300044658 Bacteria 229345
192 Ga0466972_0012682 3300044658 Bacteria 4234
193 Ga0453684_0003552 3300044712 Bacteria 34870
194 Ga0466959_0000017 3300045049 Bacteria 143170
195 Ga0495627_000002 3300046453 Bacteria 903861
196 Ga0495606_0031409 3300046507 Bacteria 3693
197 Ga0495632_0008677 3300046519 Bacteria 6207
198 Ga0495643_0021021 3300046522 Bacteria 3751
199 Ga0495648_0025007 3300046524 Bacteria 4052
200 Ga0495663_0001204 3300046525 Bacteria 8329
201 Ga0495654_0000001 3300046530 Bacteria 1513197
202 Ga0495609_0000003 3300046538 Bacteria 711547
203 Ga0495609_0000119 3300046538 Bacteria 88855
204 Ga0495633_0000001 3300046558 Bacteria 801972
205 Ga0495668_0001269 3300046616 Bacteria 25103
206 Ga0495668_0008055 3300046616 Bacteria 6636
207 Ga0495611_0000873 3300046648 Bacteria 16406
208 Ga0495625_0001710 3300046660 Bacteria 25523
209 Ga0495687_000111 3300047443 Bacteria 124789
210 Ga0495686_0000113 3300047472 Bacteria 168307
211 Ga0495686_0000125 3300047472 Bacteria 158834
212 Ga0495686_0007234 3300047472 Bacteria 8355
213 Ga0496116_0000390 3300048919 Bacteria 64244
214 Ga0496116_0002031 3300048919 Bacteria 21716
215 Ga0496116_0010596 3300048919 Bacteria 7708
216 Ga0496117_0000023 3300048920 Bacteria 438585
217 Ga0496117_0000139 3300048920 Bacteria 158612
218 Ga0496117_0005409 3300048920 Bacteria 13432
219 Ga0496118_0006560 3300048921 Bacteria 12724
220 Ga0496119_0000002 3300048922 Bacteria 738385
221 Ga0496119_0000010 3300048922 Bacteria 438534
222 Ga0496121_0000026 3300048924 Bacteria 450157
223 Ga0496121_0023579 3300048924 Bacteria 5919
224 Ga0496121_0043161 3300048924 Bacteria 3910
225 Ga0496122_0000277 3300048925 Bacteria 114200
226 Ga0496122_0000465 3300048925 Bacteria 84396
227 Ga0496122_0000855 3300048925 Bacteria 57341
228 Ga0496122_0001168 3300048925 Bacteria 44890
229 Ga0496122_0013409 3300048925 Bacteria 8025
230 Ga0496124_0008159 3300048927 Bacteria 10991
231 Ga0496124_0044740 3300048927 Bacteria 3797
232 Ga0496125_0000026 3300048928 Bacteria 397380
233 Ga0496125_0000255 3300048928 Bacteria 109838
234 Ga0496125_0000567 3300048928 Bacteria 63543
235 Ga0496125_0000661 3300048928 Bacteria 57455
236 Ga0496126_0001177 3300048929 Bacteria 42992
237 Ga0501031_0002264 3300049568 Bacteria 12194
238 Ga0501032_0005100 3300049569 Bacteria 9800
239 Ga0501032_0010481 3300049569 Bacteria 6684
240 Ga0501033_0000004 3300049570 Bacteria 441310
241 Ga0501034_0000216 3300049571 Bacteria 109908
242 Ga0501037_0007091 3300049573 Bacteria 8190
243 Ga0501038_0011048 3300049574 Bacteria 8245
244 Ga0501039_0006198 3300049575 Bacteria 9078
245 Ga0501047_0038152 3300049581 Bacteria 4647
246 Ga0501238_000041 3300049671 Bacteria 21406
247 Ga0501249_000014 3300049679 Bacteria 137700
248 Ga0501249_000028 3300049679 Bacteria 86906
249 Ga0501249_000070 3300049679 Bacteria 35806
250 Ga0501219_000003 3300049703 Bacteria 39456
251 Ga0501225_0001406 3300049705 Bacteria 7514
252 Ga0501266_000009 3300049763 Bacteria 233584
253 Ga0501266_000011 3300049763 Bacteria 197280
254 Ga0501266_000014 3300049763 Bacteria 181600
255 Ga0501269_000001 3300049766 Bacteria 122581
256 Ga0501280_000178 3300049776 Bacteria 16164
257 Ga0501035_0005370 3300049822 Bacteria 12116
258 Ga0501044_0009996 3300049823 Bacteria 10309
259 Ga0501045_0000076 3300049824 Bacteria 46838
260 Ga0501284_00027 3300050005 Bacteria 76239
261 Ga0501284_00149 3300050005 Bacteria 8219
262 Ga0500578_0000628 3300053086 Bacteria 42830
263 Ga0500646_0000636 3300053090 Bacteria 10075
264 Ga0500583_0000208 3300053092 Bacteria 22348
265 Ga0500641_0000048 3300053096 Bacteria 57304
266 Ga0500641_0000089 3300053096 Bacteria 36180
267 Ga0500616_0001380 3300053153 Bacteria 23509
268 Ga0500616_0005649 3300053153 Bacteria 8439
269 Ga0500622_0002992 3300053156 Bacteria 11713
270 Ga0501084_0000954 3300054114 Bacteria 22390

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2905999023 2906000348 824
2 3300041407 Ga0439447_002701 Ga0439447_002701_25_2631 829
3 3300048928 Ga0496125_0000255 Ga0496125_0000255_56511_59123 829
4 3300046530 Ga0495654_0000001 Ga0495654_0000001_1167220_1170114 916
5 3300013104 Ga0157370_10006472 Ga0157370_100064725 918
6 3300013105 Ga0157369_10002137 Ga0157369_1000213719 918
7 3300049823 Ga0501044_0009996 Ga0501044_0009996_7095_9905 919
8 3300025297 Ga0209758_1000615 Ga0209758_100061521 933
9 3300037471 Ga0395905_0000515 Ga0395905_0000515_14376_17369 938
10 iso_pu_bacteria 2919683626 2919684407 941
11 iso_pu_bacteria 2842083920 2842087573 944
12 3300044656 Ga0466969_0000101 Ga0466969_0000101_22753_25629 945
13 3300009553 Ga0105249_10012105 Ga0105249_100121055 950
14 3300009148 Ga0105243_10000004 Ga0105243_10000004468 954
15 3300025914 Ga0207671_10002938 Ga0207671_1000293814 955
16 3300046519 Ga0495632_0008677 Ga0495632_0008677_230_3241 956
17 3300048925 Ga0496122_0000465 Ga0496122_0000465_69739_72729 956
18 3300009545 Ga0105237_10002222 Ga0105237_1000222218 959
19 3300009545 Ga0105237_10009995 Ga0105237_100099956 959
20 3300010375 Ga0105239_10004337 Ga0105239_100043373 959
21 3300025914 Ga0207671_10002321 Ga0207671_1000232110 959
22 3300005547 Ga0070693_100005293 Ga0070693_1000052933 960
23 3300005563 Ga0068855_100045371 Ga0068855_1000453712 960
24 3300009093 Ga0105240_10005676 Ga0105240_1000567614 960
25 3300009174 Ga0105241_10001692 Ga0105241_1000169212 960
26 3300010375 Ga0105239_10002653 Ga0105239_100026532 960
27 3300017792 Ga0163161_10048251 Ga0163161_100482511 960
28 3300025911 Ga0207654_10006560 Ga0207654_100065607 960
29 3300025921 Ga0207652_10002370 Ga0207652_1000237010 960
30 3300025921 Ga0207652_10002751 Ga0207652_100027518 960
31 3300025921 Ga0207652_10004213 Ga0207652_100042137 960
32 3300046558 Ga0495633_0000001 Ga0495633_0000001_582547_585555 960
33 3300009093 Ga0105240_10001035 Ga0105240_1000103534 961
34 iso_pu_bacteria 2738541278 2738726254 962
35 3300005548 Ga0070665_100000094 Ga0070665_10000009496 963
36 3300005843 Ga0068860_100000052 Ga0068860_10000005295 963
37 3300013306 Ga0163162_10003197 Ga0163162_100031979 963
38 3300028379 Ga0268266_10000057 Ga0268266_1000005713 963
39 3300028381 Ga0268264_10000143 Ga0268264_1000014382 963
40 3300046524 Ga0495648_0025007 Ga0495648_0025007_236_3160 963
41 3300047443 Ga0495687_000111 Ga0495687_000111_67534_70458 963
42 3300053156 Ga0500622_0002992 Ga0500622_0002992_8325_11249 963
43 3300005578 Ga0068854_100023877 Ga0068854_1000238773 964
44 3300005616 Ga0068852_100010522 Ga0068852_1000105225 964
45 3300013104 Ga0157370_10008252 Ga0157370_100082529 964
46 3300025904 Ga0207647_10003551 Ga0207647_100035516 964
47 3300025981 Ga0207640_10016955 Ga0207640_100169553 964
48 3300026116 Ga0207674_10017449 Ga0207674_100174496 964
49 iso_pu_bacteria 2929239360 2929243670 964
50 3300005530 Ga0070679_100000366 Ga0070679_10000036615 965
51 3300009093 Ga0105240_10000731 Ga0105240_1000073151 965
52 3300009174 Ga0105241_10005166 Ga0105241_100051664 965
53 3300009545 Ga0105237_10019830 Ga0105237_100198305 965
54 3300009551 Ga0105238_10014520 Ga0105238_100145203 965
55 3300025911 Ga0207654_10002655 Ga0207654_100026553 965
56 3300025913 Ga0207695_10000702 Ga0207695_1000070251 965
57 3300025914 Ga0207671_10002557 Ga0207671_1000255713 965
58 3300025921 Ga0207652_10000043 Ga0207652_1000004341 965
59 3300031730 Ga0307516_10001788 Ga0307516_1000178811 965
60 3300037418 Ga0395900_0020664 Ga0395900_0020664_64_3009 965
61 3300003316 rootH1_10021603 rootH1_100216037 966
62 3300010375 Ga0105239_10003540 Ga0105239_1000354012 966
63 3300025949 Ga0207667_10004337 Ga0207667_1000433715 966
64 3300038443 Ga0395901_0027547 Ga0395901_0027547_2358_5306 966
65 3300044658 Ga0466972_0000013 Ga0466972_0000013_199158_202109 966
66 3300044658 Ga0466972_0012682 Ga0466972_0012682_569_3517 966
67 3300045049 Ga0466959_0000017 Ga0466959_0000017_110757_113696 966
68 3300046522 Ga0495643_0021021 Ga0495643_0021021_237_3290 966
69 3300049705 Ga0501225_0001406 Ga0501225_0001406_2716_5667 966
70 3300053086 Ga0500578_0000628 Ga0500578_0000628_35377_38325 966
71 3300053092 Ga0500583_0000208 Ga0500583_0000208_14381_17332 966
72 3300053153 Ga0500616_0005649 Ga0500616_0005649_3051_5999 966
73 iso_pu_bacteria 2522125168 2522549995 966
74 3300005563 Ga0068855_100041837 Ga0068855_1000418372 967
75 3300013102 Ga0157371_10021614 Ga0157371_100216142 967
76 3300013104 Ga0157370_10009911 Ga0157370_100099112 967
77 3300013307 Ga0157372_10052462 Ga0157372_100524622 967
78 3300026095 Ga0207676_10033844 Ga0207676_100338443 967
79 3300037466 Ga0395898_0012127 Ga0395898_0012127_4755_7715 967
80 3300038443 Ga0395901_0001357 Ga0395901_0001357_5623_8583 967
81 3300046616 Ga0495668_0008055 Ga0495668_0008055_3556_6543 967
82 3300049703 Ga0501219_000003 Ga0501219_000003_23803_26784 967
83 3300050005 Ga0501284_00027 Ga0501284_00027_23311_26292 967
84 3300054114 Ga0501084_0000954 Ga0501084_0000954_4704_7661 967
85 iso_pu_bacteria 2818991442 2819575852 967
86 iso_pu_bacteria 2821136567 2821138398 967
87 iso_pu_bacteria 2904467357 2904469194 967
88 iso_pu_bacteria 2919692658 2919697133 967
89 3300003320 rootH2_10009245 rootH2_100092456 968
90 3300003323 rootH1_10166389 rootH1_1016638918 968
91 3300005353 Ga0070669_100012134 Ga0070669_1000121344 968
92 3300005456 Ga0070678_100011123 Ga0070678_1000111235 968
93 3300005543 Ga0070672_100008120 Ga0070672_1000081206 968
94 3300025295 Ga0209564_1000127 Ga0209564_1000127123 968
95 3300025907 Ga0207645_10000198 Ga0207645_100001989 968
96 3300025942 Ga0207689_10001133 Ga0207689_1000113314 968
97 3300026089 Ga0207648_10004185 Ga0207648_1000418510 968
98 3300026121 Ga0207683_10003678 Ga0207683_100036782 968
99 3300044712 Ga0453684_0003552 Ga0453684_0003552_19268_22246 968
100 3300046648 Ga0495611_0000873 Ga0495611_0000873_3099_6086 968
101 3300050005 Ga0501284_00149 Ga0501284_00149_1148_4072 968
102 3300005339 Ga0070660_100004792 Ga0070660_1000047927 969
103 3300003320 rootH2_10001223 rootH2_1000122375 970
104 3300005262 Ga0065165_1000037 Ga0065165_1000037115 970
105 3300005335 Ga0070666_10000040 Ga0070666_1000004043 970
106 3300005617 Ga0068859_100000436 Ga0068859_1000004368 970
107 3300005617 Ga0068859_100007737 Ga0068859_1000077374 970
108 3300005841 Ga0068863_100000330 Ga0068863_10000033046 970
109 3300005842 Ga0068858_100000316 Ga0068858_10000031632 970
110 3300005843 Ga0068860_100006079 Ga0068860_1000060797 970
111 3300005843 Ga0068860_100022615 Ga0068860_1000226152 970
112 3300006931 Ga0097620_100000436 Ga0097620_1000004368 970
113 3300006931 Ga0097620_100007737 Ga0097620_1000077374 970
114 3300009174 Ga0105241_10000562 Ga0105241_1000056228 970
115 3300009545 Ga0105237_10001041 Ga0105237_1000104123 970
116 3300011119 Ga0105246_10000147 Ga0105246_1000014733 970
117 3300013306 Ga0163162_10046097 Ga0163162_100460973 970
118 3300025903 Ga0207680_10000058 Ga0207680_1000005814 970
119 3300025907 Ga0207645_10009417 Ga0207645_100094173 970
120 3300025914 Ga0207671_10000209 Ga0207671_1000020927 970
121 3300026035 Ga0207703_10000493 Ga0207703_1000049320 970
122 3300026088 Ga0207641_10000051 Ga0207641_1000005194 970
123 3300028381 Ga0268264_10017375 Ga0268264_100173757 970
124 3300046616 Ga0495668_0001269 Ga0495668_0001269_21600_24572 970
125 3300049568 Ga0501031_0002264 Ga0501031_0002264_4211_7357 970
126 3300049569 Ga0501032_0005100 Ga0501032_0005100_4652_7798 970
127 3300049570 Ga0501033_0000004 Ga0501033_0000004_253448_256594 970
128 3300049571 Ga0501034_0000216 Ga0501034_0000216_102168_105314 970
129 3300049573 Ga0501037_0007091 Ga0501037_0007091_3976_7122 970
130 3300049574 Ga0501038_0011048 Ga0501038_0011048_2257_5403 970
131 3300049575 Ga0501039_0006198 Ga0501039_0006198_600_3746 970
132 3300049581 Ga0501047_0038152 Ga0501047_0038152_123_3269 970
133 3300049822 Ga0501035_0005370 Ga0501035_0005370_5116_8262 970
134 3300049824 Ga0501045_0000076 Ga0501045_0000076_4408_7554 970
135 3300053153 Ga0500616_0001380 Ga0500616_0001380_10261_13218 970
136 3300003322 rootL2_10080212 rootL2_100802126 971
137 3300014497 Ga0182008_10001074 Ga0182008_1000107415 971
138 3300015265 Ga0182005_1001603 Ga0182005_10016036 971
139 3300032004 Ga0307414_10000133 Ga0307414_1000013317 971
140 3300047472 Ga0495686_0000113 Ga0495686_0000113_118035_120983 971
141 3300048924 Ga0496121_0000026 Ga0496121_0000026_264345_267278 971
142 3300049569 Ga0501032_0010481 Ga0501032_0010481_3151_6597 971
143 iso_pu_bacteria 2585428185 2588222516 971
144 iso_pu_bacteria 2728369107 2729199343 971
145 iso_pu_bacteria 2751185877 2753670884 971
146 iso_pu_bacteria 2881359912 2881363406 971
147 iso_pu_bacteria 2904780799 2904784907 971
148 iso_pu_bacteria 2919399522 2919399886 971
149 3300005289 Ga0065704_10000221 Ga0065704_10000221106 972
150 3300027361 Ga0209489_106209 Ga0209489_10620916 972
151 iso_pu_bacteria 2919191525 2919196148 972
152 3300005290 Ga0065712_10069588 Ga0065712_100695887 973
153 3300037471 Ga0395905_0000795 Ga0395905_0000795_12057_14990 973
154 iso_pu_bacteria 2519899754 2520878680 973
155 iso_pu_bacteria 2519899754 2520881075 973
156 iso_pu_bacteria 2523533629 2524006077 973
157 iso_pu_bacteria 2582581278 2585141747 973
158 iso_pu_bacteria 2585428060 2587746484 973
159 iso_pu_bacteria 2585428095 2587865974 973
160 iso_pu_bacteria 2585428115 2587943496 973
161 iso_pu_bacteria 2585428182 2588209162 973
162 iso_pu_bacteria 2585428182 2588211241 973
163 iso_pu_bacteria 2585428183 2588212694 973
164 iso_pu_bacteria 2588253712 2588447311 973
165 iso_pu_bacteria 2588254255 2590600620 973
166 iso_pu_bacteria 2588254257 2590612085 973
167 iso_pu_bacteria 2588254257 2590612619 973
168 iso_pu_bacteria 2643221667 2644371979 973
169 iso_pu_bacteria 2643221667 2644372510 973
170 iso_pu_bacteria 2643221716 2644643181 973
171 iso_pu_bacteria 2643221725 2644683916 973
172 iso_pu_bacteria 2643221725 2644685952 973
173 iso_pu_bacteria 2728369107 2729200532 973
174 iso_pu_bacteria 2738541279 2738737089 973
175 iso_pu_bacteria 2738541285 2738769629 973
176 iso_pu_bacteria 2738543007 2739218671 973
177 iso_pu_bacteria 2739367857 2739999403 973
178 iso_pu_bacteria 2739367858 2740004220 973
179 iso_pu_bacteria 2739367874 2740057791 973
180 iso_pu_bacteria 2751185877 2753672298 973
181 iso_pu_bacteria 2751185877 2753674454 973
182 iso_pu_bacteria 2765235839 2765576601 973
183 iso_pu_bacteria 2802428842 2802652195 973
184 iso_pu_bacteria 2802428842 2802653122 973
185 iso_pu_bacteria 2816332188 2816872508 973
186 iso_pu_bacteria 2816332188 2816873234 973
187 iso_pu_bacteria 2816332188 2816875271 973
188 iso_pu_bacteria 2816332280 2817415052 973
189 iso_pu_bacteria 2833640130 2833640789 973
190 iso_pu_bacteria 2842083920 2842087721 973
191 iso_pu_bacteria 2857613821 2857616777 973
192 iso_pu_bacteria 2857618242 2857618503 973
193 iso_pu_bacteria 2857618242 2857621286 973
194 iso_pu_bacteria 2871720351 2871722615 973
195 iso_pu_bacteria 2881359912 2881359927 973
196 iso_pu_bacteria 2889290771 2889291140 973
197 iso_pu_bacteria 2889290771 2889292354 973
198 iso_pu_bacteria 2889290771 2889292956 973
199 iso_pu_bacteria 2896317667 2896318264 973
200 iso_pu_bacteria 2903895155 2903896168 973
201 iso_pu_bacteria 2903895155 2903897013 973
202 iso_pu_bacteria 2904419702 2904421360 973
203 iso_pu_bacteria 2904555929 2904555971 973
204 iso_pu_bacteria 2904555929 2904559953 973
205 iso_pu_bacteria 2929150217 2929152227 973
206 iso_pu_bacteria 2945924605 2945926416 973
207 iso_pu_bacteria 2946019816 2946021014 973
208 iso_pu_bacteria 2958458903 2958460076 973
209 iso_pu_bacteria 2958458903 2958461033 973
210 iso_pu_bacteria 2958512119 2958514638 973
211 iso_pu_bacteria 2977243572 2977244613 973
212 iso_pu_bacteria 2977268062 2977268925 973
213 iso_pu_bacteria 2977268062 2977269063 973
214 iso_pu_bacteria 2977268062 2977270099 973
215 iso_pu_bacteria 2977268062 2977270869 973
216 iso_pu_bacteria 2984572630 2984576533 973
217 iso_pu_bacteria 2984606641 2984609989 973
218 iso_pu_bacteria 2993372514 2993372643 973
219 iso_pu_bacteria 8036736890 8036737406 973
220 iso_pu_bacteria 8055592153 8055593547 973
221 iso_pu_bacteria 8055592153 8055594245 973
222 iso_pu_bacteria 8056440228 8056441590 973
223 iso_pu_bacteria 2721755487 2722727997 974
224 iso_pu_bacteria 2881955468 2881958519 974
225 iso_pu_bacteria 2904780799 2904781429 974
226 iso_pu_bacteria 2904780799 2904785267 974
227 iso_pu_bacteria 2919177583 2919177847 974
228 iso_pu_bacteria 2919177583 2919177886 974
229 3300009148 Ga0105243_10000104 Ga0105243_1000010437 975
230 3300025935 Ga0207709_10000144 Ga0207709_1000014456 975
231 3300031548 Ga0307408_100000130 Ga0307408_1000001308 975
232 3300032004 Ga0307414_10000221 Ga0307414_1000022133 975
233 3300032004 Ga0307414_10000264 Ga0307414_100002645 975
234 3300048920 Ga0496117_0000023 Ga0496117_0000023_119991_123035 975
235 3300048921 Ga0496118_0006560 Ga0496118_0006560_2447_5491 975
236 3300048922 Ga0496119_0000010 Ga0496119_0000010_315561_318605 975
237 3300005834 Ga0068851_10000034 Ga0068851_1000003434 976
238 3300013100 Ga0157373_10002052 Ga0157373_100020527 976
239 3300013102 Ga0157371_10039291 Ga0157371_100392912 976
240 3300014497 Ga0182008_10000005 Ga0182008_1000000525 976
241 3300025321 Ga0207656_10000027 Ga0207656_1000002717 976
242 3300031344 Ga0265316_10005999 Ga0265316_100059994 976
243 3300002737 JGI25162J39368_1000005 JGI25162J39368_100000525 977
244 3300005288 Ga0065714_10008784 Ga0065714_100087842 977
245 3300005288 Ga0065714_10064709 Ga0065714_1006470923 977
246 3300005288 Ga0065714_10067385 Ga0065714_100673852 977
247 3300005329 Ga0070683_100005488 Ga0070683_1000054886 977
248 3300005337 Ga0070682_100000231 Ga0070682_10000023133 977
249 3300005337 Ga0070682_100000493 Ga0070682_10000049327 977
250 3300005339 Ga0070660_100026841 Ga0070660_1000268412 977
251 3300005344 Ga0070661_100012795 Ga0070661_1000127952 977
252 3300005535 Ga0070684_100011572 Ga0070684_1000115722 977
253 3300006942 Ga0099824_1000172 Ga0099824_100017217 977
254 3300006942 Ga0099824_1003521 Ga0099824_100352117 977
255 3300006946 Ga0079104_1000005 Ga0079104_1000005116 977
256 3300006946 Ga0079104_1000023 Ga0079104_1000023159 977
257 3300006946 Ga0079104_1000154 Ga0079104_100015474 977
258 3300006948 Ga0099826_10014353 Ga0099826_100143532 977
259 3300009036 Ga0105244_10000035 Ga0105244_10000035123 977
260 3300009036 Ga0105244_10001529 Ga0105244_100015294 977
261 3300013100 Ga0157373_10000002 Ga0157373_10000002418 977
262 3300013100 Ga0157373_10000008 Ga0157373_10000008140 977
263 3300013100 Ga0157373_10000154 Ga0157373_1000015419 977
264 3300013102 Ga0157371_10000081 Ga0157371_10000081119 977
265 3300013102 Ga0157371_10000255 Ga0157371_1000025576 977
266 3300013102 Ga0157371_10001655 Ga0157371_1000165512 977
267 3300013104 Ga0157370_10000068 Ga0157370_1000006832 977
268 3300013104 Ga0157370_10000191 Ga0157370_1000019136 977
269 3300013104 Ga0157370_10000375 Ga0157370_1000037511 977
270 3300013104 Ga0157370_10001449 Ga0157370_1000144922 977
271 3300013104 Ga0157370_10001543 Ga0157370_1000154312 977
272 3300013104 Ga0157370_10002528 Ga0157370_1000252818 977
273 3300013104 Ga0157370_10004295 Ga0157370_1000429515 977
274 3300013105 Ga0157369_10000575 Ga0157369_1000057513 977
275 3300013105 Ga0157369_10003252 Ga0157369_1000325210 977
276 3300013308 Ga0157375_10000460 Ga0157375_1000046023 977
277 3300014497 Ga0182008_10003182 Ga0182008_100031825 977
278 3300015261 Ga0182006_1000100 Ga0182006_100010044 977
279 3300015261 Ga0182006_1000195 Ga0182006_100019534 977
280 3300015261 Ga0182006_1000668 Ga0182006_10006682 977
281 3300015261 Ga0182006_1005192 Ga0182006_10051923 977
282 3300017792 Ga0163161_10000009 Ga0163161_1000000921 977
283 3300017792 Ga0163161_10000543 Ga0163161_100005433 977
284 3300025233 Ga0209437_100043 Ga0209437_100043372 977
285 3300025291 Ga0209675_1000066 Ga0209675_10000664 977
286 3300025291 Ga0209675_1000088 Ga0209675_100008861 977
287 3300025291 Ga0209675_1000279 Ga0209675_100027925 977
288 3300025728 Ga0207655_1000008 Ga0207655_100000850 977
289 3300025728 Ga0207655_1001342 Ga0207655_100134216 977
290 3300025944 Ga0207661_10002141 Ga0207661_100021412 977
291 3300027111 Ga0209281_1000037 Ga0209281_100003783 977
292 3300027111 Ga0209281_1000094 Ga0209281_1000094111 977
293 3300027111 Ga0209281_1000158 Ga0209281_10001587 977
294 3300027666 Ga0209282_1010175 Ga0209282_10101752 977
295 3300031731 Ga0307405_10000021 Ga0307405_10000021133 977
296 3300031824 Ga0307413_10000228 Ga0307413_100002288 977
297 3300031852 Ga0307410_10000216 Ga0307410_1000021619 977
298 3300031901 Ga0307406_10000039 Ga0307406_1000003926 977
299 3300031911 Ga0307412_10000090 Ga0307412_1000009040 977
300 3300032004 Ga0307414_10000001 Ga0307414_10000001620 977
301 3300032004 Ga0307414_10000002 Ga0307414_10000002419 977
302 3300032004 Ga0307414_10000104 Ga0307414_1000010430 977
303 3300032004 Ga0307414_10000340 Ga0307414_1000034023 977
304 3300032004 Ga0307414_10000348 Ga0307414_100003485 977
305 3300032004 Ga0307414_10002950 Ga0307414_100029509 977
306 3300032004 Ga0307414_10002967 Ga0307414_100029672 977
307 3300032004 Ga0307414_10003816 Ga0307414_100038166 977
308 3300032004 Ga0307414_10011910 Ga0307414_100119102 977
309 3300032005 Ga0307411_10000001 Ga0307411_10000001167 977
310 3300032005 Ga0307411_10000001 Ga0307411_10000001215 977
311 3300032005 Ga0307411_10000004 Ga0307411_10000004281 977
312 3300032005 Ga0307411_10000010 Ga0307411_1000001015 977
313 3300041407 Ga0439447_002095 Ga0439447_002095_3207_6266 977
314 3300041407 Ga0439447_002140 Ga0439447_002140_137_3193 977
315 3300046453 Ga0495627_000002 Ga0495627_000002_129301_132375 977
316 3300046507 Ga0495606_0031409 Ga0495606_0031409_63_3128 977
317 3300046525 Ga0495663_0001204 Ga0495663_0001204_3863_6919 977
318 3300046530 Ga0495654_0000001 Ga0495654_0000001_1425892_1428945 977
319 3300046538 Ga0495609_0000003 Ga0495609_0000003_480345_483413 977
320 3300046538 Ga0495609_0000119 Ga0495609_0000119_15638_18691 977
321 3300046660 Ga0495625_0001710 Ga0495625_0001710_10047_13103 977
322 3300047472 Ga0495686_0000125 Ga0495686_0000125_152474_155527 977
323 3300047472 Ga0495686_0007234 Ga0495686_0007234_921_3995 977
324 3300048919 Ga0496116_0000390 Ga0496116_0000390_36685_39741 977
325 3300048919 Ga0496116_0002031 Ga0496116_0002031_11887_14940 977
326 3300048920 Ga0496117_0000139 Ga0496117_0000139_12036_15089 977
327 3300048922 Ga0496119_0000002 Ga0496119_0000002_591964_595017 977
328 3300048924 Ga0496121_0023579 Ga0496121_0023579_1395_4451 977
329 3300048924 Ga0496121_0043161 Ga0496121_0043161_118_3171 977
330 3300048925 Ga0496122_0000277 Ga0496122_0000277_49119_52205 977
331 3300048925 Ga0496122_0000855 Ga0496122_0000855_27618_30668 977
332 3300048925 Ga0496122_0001168 Ga0496122_0001168_29059_32115 977
333 3300048925 Ga0496122_0013409 Ga0496122_0013409_1298_4351 977
334 3300048927 Ga0496124_0008159 Ga0496124_0008159_1673_4729 977
335 3300048927 Ga0496124_0044740 Ga0496124_0044740_276_3329 977
336 3300048928 Ga0496125_0000026 Ga0496125_0000026_105765_108818 977
337 3300048928 Ga0496125_0000567 Ga0496125_0000567_33966_37022 977
338 3300048928 Ga0496125_0000661 Ga0496125_0000661_16972_20028 977
339 3300048929 Ga0496126_0001177 Ga0496126_0001177_31072_34128 977
340 3300049671 Ga0501238_000041 Ga0501238_000041_8043_11099 977
341 3300049679 Ga0501249_000014 Ga0501249_000014_44138_47191 977
342 3300049679 Ga0501249_000028 Ga0501249_000028_46357_49413 977
343 3300049679 Ga0501249_000070 Ga0501249_000070_15107_18211 977
344 3300049763 Ga0501266_000009 Ga0501266_000009_20760_23819 977
345 3300049763 Ga0501266_000011 Ga0501266_000011_28577_31630 977
346 3300049763 Ga0501266_000014 Ga0501266_000014_118005_121109 977
347 3300049766 Ga0501269_000001 Ga0501269_000001_85124_88219 977
348 3300049776 Ga0501280_000178 Ga0501280_000178_8135_11191 977
349 3300053090 Ga0500646_0000636 Ga0500646_0000636_6607_9666 977
350 3300053096 Ga0500641_0000048 Ga0500641_0000048_31623_34682 977
351 3300053096 Ga0500641_0000089 Ga0500641_0000089_28104_31172 977
352 iso_pu_bacteria 2977243572 2977243755 977
353 3300003323 rootH1_10118542 rootH1_101185426 978
354 3300005289 Ga0065704_10070692 Ga0065704_100706928 978
355 3300025913 Ga0207695_10001770 Ga0207695_1000177019 978
356 3300025935 Ga0207709_10000010 Ga0207709_10000010471 978
357 3300028653 Ga0265323_10000635 Ga0265323_100006357 978
358 3300031344 Ga0265316_10004615 Ga0265316_1000461512 978
359 3300048919 Ga0496116_0010596 Ga0496116_0010596_3698_6634 978
360 3300048920 Ga0496117_0005409 Ga0496117_0005409_5913_8849 978
361 iso_pu_bacteria 2585428115 2587941865 978
362 2162886007 SwRhRL2b_contig_2732696 SwRhRL2b_0490.00004290 979
363 3300003323 rootH1_10146560 rootH1_101465602 979
364 3300005289 Ga0065704_10000205 Ga0065704_1000020584 979
365 3300013102 Ga0157371_10000433 Ga0157371_100004339 979
366 3300013104 Ga0157370_10000153 Ga0157370_1000015330 979

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17657

DNA_pol3_finger

Bacterial DNA polymerase III alpha subunit finger domain

520

697

0.95

PF07733

DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

249

513

0.93

PF02811

PHP

PHP domain

3

115

0.86

PF14579

HHH_6

Helix-hairpin-helix motif

769

891

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5dlq-assembly2.cif.gz_E crystal structure of rangtp-exportin 4-eif5a complex 0.8599 898 930
2hnh-assembly1.cif.gz_A crystal structure of the catalytic alpha subunit of e. coli replicative dna polymerase iii 0.8532 2 822
5lew-assembly1.cif.gz_A dna polymerase 0.846 2 821
1l1o-assembly1.cif.gz_E structure of the human replication protein a (rpa) trimerization core 0.8448 893 970
4jom-assembly1.cif.gz_A structure of e. coli pol iii 3mphp mutant 0.8437 1 826
ID Description Score Start End Superfamily
af_P9WNT5_829_920_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9179 712 801 1.10.150.870
af_P9WNT5_829_920_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.8903 712 801 1.10.150.870
1l1oE00 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8448 893 970 2.40.50.140
af_P10443_981_1074_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8356 891 969 2.40.50.140
af_A0A0R0JA37_7_107_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8325 893 956 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A3B9NEE3-F1-model_v4 PHP domain-containing protein 0.9871 29 115
AF-A0A2R7KFY8-F1-model_v4 DNA polymerase III subunit alpha 0.9741 1 474 GO:0006260
GO:0008408
AF-A0A662CT64-F1-model_v4 DNA polymerase III subunit alpha 0.9728 451 977 GO:0006260
GO:0008408
AF-A0A2R7KFY8-F1-model_v4 DNA polymerase III subunit alpha 0.9721 1 474 GO:0006260
GO:0008408
AF-A0A662CT64-F1-model_v4 DNA polymerase III subunit alpha 0.9692 451 977 GO:0006260
GO:0008408

Feature Viewer

pLDDT pTM Quality
90.98 0.87 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map