F422731

General Info

Members Datasets Scaffolds Average Seq Length
362 199 714 333

Family's Representative Sequence

Representative Sequence 3300046524|Ga0495648_0008822|Ga0495648_0008822_6216_7373
Length 385
Sequence LQQSILFACQVGPKTIKYFLAIIGKERSPFVALPFGGRSNLISFEKSGRTEMPWSKVLTFTDPFPYQSAFRSVDVELFPIAKGEFHAELTQISMSKLWIHGAHENLPRVYVGAVRPHRAAIGFLTEANQPAMQHCGMEVLPDDIIINNADMMHRRTAANCDWGSMSLTPDDLDAACKAITGREFSKASRKHLVRPSPTLMSRLLKLHGMVGQIAKTAPDLLELPEVVRALEQELVHAMIRCLTEGEFWEMTAGGRRHDMIVARFEEFLEANPDKPLYLTEICAAIGVAERTLRVACEEHLGMGPIRYLSLRRMHLVRRALIRADASTATVTRLATDHGFWELGRFSVAYRELFGESPSESLRRPADDRRALLNRPSSLESPILHS

Samples

Sample ID Description Type Environment
1 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
19 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
20 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
26 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
60 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
61 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
62 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
63 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
64 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
65 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
66 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
67 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
69 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
70 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
71 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
84 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
85 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
86 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
92 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
97 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
107 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
110 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
118 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
134 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
137 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
140 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
141 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
142 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
143 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
144 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
145 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
146 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
147 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
148 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
149 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
150 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
151 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
154 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
155 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
156 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
157 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
158 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
159 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule
160 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
161 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
162 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
163 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
164 2906610324
165 2932801729 Bradyrhizobium sp. S3.3.6 Isolate Nodule
166 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
167 2935684952 Bradyrhizobium sp. LA3.X Isolate Nodule
168 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
169 2935713505 Bradyrhizobium sp. LA6.12 Isolate Nodule
170 2935722832 Bradyrhizobium sp. LA6.3 Isolate Nodule
171 2935732158 Bradyrhizobium sp. LA6.4 Isolate Nodule
172 2935741537 Bradyrhizobium sp. LA6.7 Isolate Nodule
173 2935750917 Bradyrhizobium sp. LA6.8 Isolate Nodule
174 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
175 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
176 2935777560 Bradyrhizobium sp. LB14.3 Isolate Nodule
177 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
178 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
179 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
180 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
181 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule
182 2940556831 Bradyrhizobium sp. LA8.1 Isolate Nodule
183 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
184 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
185 8016522445 Bradyrhizobium sp. LM6.9 Isolate Nodule
186 8016530956 Bradyrhizobium sp. LM6.11 Isolate Nodule
187 8016539877 Bradyrhizobium sp. LM6.10 Isolate Nodule
188 8016548790 Bradyrhizobium sp. LM3.6 Isolate Nodule
189 8016557553 Bradyrhizobium sp. LM3.4 Isolate Nodule
190 8016566248 Bradyrhizobium sp. LM3.2 Isolate Nodule
191 8016595262 Bradyrhizobium sp. LM2.3 Isolate Nodule
192 8016603502 Bradyrhizobium sp. LB7.2 Isolate Nodule
193 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
194 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
195 8019530166 Bradyrhizobium sp. LM4.3 Isolate Nodule
196 8019538911 Bradyrhizobium sp. LB9.1b Isolate Nodule
197 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
198 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
199 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 81.44
Metatranscriptomes 0
Isolates 18.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.12
Nodule 17.4
Rhizoplane 2.76
Rhizosphere 66.57
Stem 0
Stem Tuber 0
Unclassified 9.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495648_0008822 3300046524 Bacteria 7888
2 JGI25404J52841_10000556 3300003659 Bacteria 5522
3 Ga0070680_100036519 3300005336 Bacteria 3969
4 Ga0070709_10008406 3300005434 Bacteria 5669
5 Ga0070709_10040216 3300005434 Bacteria 2874
6 Ga0070709_10097537 3300005434 Bacteria 1951
7 Ga0070714_100006831 3300005435 Bacteria 8843
8 Ga0070714_100142507 3300005435 Bacteria 2153
9 Ga0070714_100477214 3300005435 Unclassified 1187
10 Ga0070713_100005201 3300005436 Bacteria 8862
11 Ga0070713_100044906 3300005436 Bacteria 3618
12 Ga0070713_100059816 3300005436 Bacteria 3183
13 Ga0070713_100099593 3300005436 Bacteria 2515
14 Ga0070710_10000222 3300005437 Bacteria 26502
15 Ga0070710_10030039 3300005437 Bacteria 2921
16 Ga0070711_100002897 3300005439 Bacteria 9890
17 Ga0070711_100006454 3300005439 Bacteria 7071
18 Ga0070711_100013960 3300005439 Bacteria 5053
19 Ga0070711_100034748 3300005439 Bacteria 3365
20 Ga0070711_100048754 3300005439 Plasmid 2898
21 Ga0070707_100051176 3300005468 Bacteria 3960
22 Ga0070679_100005024 3300005530 Bacteria 12208
23 Ga0070697_100126808 3300005536 Bacteria 2138
24 Ga0070665_100035584 3300005548 Bacteria 5007
25 Ga0070665_100160780 3300005548 Bacteria 2248
26 Ga0068855_100030189 3300005563 Bacteria 6484
27 Ga0068862_100082586 3300005844 Plasmid 2789
28 Ga0081455_10005908 3300005937 Bacteria 13284
29 Ga0081455_10006574 3300005937 Bacteria 12436
30 Ga0081540_1001495 3300005983 Bacteria 20156
31 Ga0081540_1002056 3300005983 Bacteria 16782
32 Ga0081540_1002133 3300005983 Bacteria 16458
33 Ga0081540_1002391 3300005983 Bacteria 15311
34 Ga0081540_1005823 3300005983 Bacteria 9118
35 Ga0070717_10267477 3300006028 Bacteria 1514
36 Ga0075365_10025088 3300006038 Bacteria 3771
37 Ga0075365_10150005 3300006038 Bacteria 1622
38 Ga0075368_10015105 3300006042 Plasmid 2859
39 Ga0070715_10038382 3300006163 Bacteria 1988
40 Ga0070716_100006195 3300006173 Bacteria 5838
41 Ga0070716_100031757 3300006173 Bacteria 2875
42 Ga0070716_100043233 3300006173 Bacteria 2518
43 Ga0070712_100034334 3300006175 Bacteria 3437
44 Ga0070712_100308914 3300006175 Unclassified 1282
45 Ga0075362_10064142 3300006177 Bacteria 1666
46 Ga0075367_10020018 3300006178 Bacteria 3721
47 Ga0075367_10063729 3300006178 Unclassified 2204
48 Ga0075369_10002934 3300006186 Bacteria 6158
49 Ga0075370_10049502 3300006353 Unclassified 2383
50 Ga0075370_10055639 3300006353 Bacteria 2248
51 Ga0075434_100086547 3300006871 Bacteria 3134
52 Ga0099794_10023453 3300007265 Bacteria 2822
53 Ga0099794_10079376 3300007265 Bacteria 1617
54 Ga0099795_10038016 3300007788 Unclassified 1697
55 Ga0099795_10040448 3300007788 Bacteria 1655
56 Ga0111539_10301405 3300009094 Bacteria 1865
57 Ga0105237_10006794 3300009545 Bacteria 12616
58 Ga0105238_10000676 3300009551 Bacteria 35848
59 Ga0099796_10063531 3300010159 Bacteria 1315
60 Ga0105239_10015846 3300010375 Bacteria 8343
61 Ga0157374_10082320 3300013296 Bacteria 3056
62 Ga0163162_10251596 3300013306 Bacteria 1899
63 Ga0157379_10281394 3300014968 Unclassified 1514
64 Ga0213876_10017480 3300021384 Bacteria 3786
65 Ga0213875_10076767 3300021388 Bacteria 1559
66 Ga0209677_100598 3300025253 Bacteria 19523
67 Ga0209148_1008210 3300025254 Bacteria 2111
68 Ga0209455_1009626 3300025272 Bacteria 2522
69 Ga0207692_10000339 3300025898 Bacteria 16247
70 Ga0207692_10040020 3300025898 Bacteria 2311
71 Ga0207699_10003473 3300025906 Bacteria 7523
72 Ga0207699_10006114 3300025906 Bacteria 5805
73 Ga0207699_10059121 3300025906 Bacteria 2296
74 Ga0207699_10308097 3300025906 Unclassified 1107
75 Ga0207684_10190985 3300025910 Bacteria 1767
76 Ga0207671_10029834 3300025914 Bacteria 4071
77 Ga0207693_10005417 3300025915 Bacteria 10655
78 Ga0207693_10046736 3300025915 Bacteria 3401
79 Ga0207693_10124941 3300025915 Bacteria 2022
80 Ga0207663_10001675 3300025916 Bacteria 10418
81 Ga0207663_10241249 3300025916 Unclassified 1326
82 Ga0207663_10334733 3300025916 Bacteria 1141
83 Ga0207663_10334734 3300025916 Unclassified 1141
84 Ga0207646_10190297 3300025922 Bacteria 1853
85 Ga0207694_10039664 3300025924 Bacteria 3624
86 Ga0207700_10052019 3300025928 Bacteria 3060
87 Ga0207700_10075130 3300025928 Bacteria 2617
88 Ga0207700_10099483 3300025928 Bacteria 2315
89 Ga0207664_10020528 3300025929 Bacteria 4898
90 Ga0207665_10008495 3300025939 Bacteria 6761
91 Ga0207665_10126275 3300025939 Bacteria 1811
92 Ga0207665_10212135 3300025939 Bacteria 1415
93 Ga0207667_10074854 3300025949 Bacteria 3516
94 Ga0209179_1001859 3300027512 Bacteria 2714
95 Ga0207428_10204574 3300027907 Bacteria 1485
96 Ga0268266_10094270 3300028379 Bacteria 2627
97 Ga0268265_10100068 3300028380 Unclassified 2339
98 Ga0373944_0022429 3300035089 Bacteria 1835
99 Ga0373936_0020961 3300035113 Bacteria 2541
100 Ga0373936_0030180 3300035113 Bacteria 2138
101 Ga0373953_0001530 3300035117 Bacteria 6720
102 Ga0373953_0098218 3300035117 Unclassified 1230
103 Ga0373954_0006783 3300035118 Bacteria 4994
104 Ga0373954_0113657 3300035118 Unclassified 1311
105 Ga0373956_0003754 3300035119 Bacteria 6118
106 Ga0373956_0016606 3300035119 Bacteria 3093
107 Ga0373943_0016429 3300035170 Bacteria 3375
108 Ga0373946_0033111 3300035171 Bacteria 2079
109 Ga0373946_0066269 3300035171 Bacteria 1548
110 Ga0373955_0006438 3300035172 Bacteria 5348
111 Ga0373955_0062289 3300035172 Bacteria 2062
112 Ga0373955_0083893 3300035172 Bacteria 1805
113 Ga0373955_0124232 3300035172 Unclassified 1502
114 Ga0373924_0004247 3300035410 Bacteria 4989
115 Ga0373924_0031906 3300035410 Bacteria 2120
116 Ga0373924_0046656 3300035410 Bacteria 1786
117 Ga0373935_0000221 3300035692 Bacteria 27665
118 Ga0373935_0067453 3300035692 Unclassified 2300
119 Ga0373935_0144735 3300035692 Bacteria 1608
120 Ga0373935_0275727 3300035692 Bacteria 1183
121 Ga0373927_0022470 3300035695 Bacteria 4132
122 Ga0373927_0022595 3300035695 Bacteria 4119
123 Ga0373927_0040731 3300035695 Bacteria 3013
124 Ga0373927_0070163 3300035695 Unclassified 2268
125 Ga0373927_0106992 3300035695 Bacteria 1821
126 Ga0373933_0011506 3300035724 Bacteria 4881
127 Ga0373933_0021083 3300035724 Plasmid 3698
128 Ga0373947_0004728 3300035725 Bacteria 7982
129 Ga0373947_0143340 3300035725 Bacteria 1534
130 Ga0373937_0077982 3300036401 Bacteria 3061
131 Ga0373937_0101211 3300036401 Bacteria 2674
132 Ga0373937_0530614 3300036401 Bacteria 1118
133 Ga0373925_0003263 3300037068 Bacteria 12637
134 Ga0373925_0040182 3300037068 Bacteria 3463
135 Ga0373925_0106730 3300037068 Bacteria 2159
136 Ga0373925_0115608 3300037068 Unclassified 2077
137 Ga0373925_0126595 3300037068 Bacteria 1988
138 Ga0395900_0131484 3300037418 Bacteria 2565
139 Ga0395898_0068923 3300037466 Bacteria 3423
140 Ga0395905_0052957 3300037471 Bacteria 3799
141 Ga0395905_0113955 3300037471 Bacteria 2540
142 Ga0395905_0163043 3300037471 Unclassified 2095
143 Ga0395905_0555621 3300037471 Unclassified 1049
144 Ga0395901_0222585 3300038443 Unclassified 1972
145 Ga0436365_1076445 3300039437 Bacteria 11915
146 Ga0436365_1311311 3300039437 Bacteria 46488
147 Ga0436361_0636856 3300039447 Bacteria 2068
148 Ga0436363_0338237 3300039450 Bacteria 1595
149 Ga0436363_0410452 3300039450 Bacteria 1671
150 Ga0436362_1046746 3300039453 Bacteria 2148
151 Ga0436362_1302693 3300039453 Bacteria 2726
152 Ga0495592_0007242 3300046454 Bacteria 8305
153 Ga0495592_0023552 3300046454 Bacteria 4684
154 Ga0495592_0191367 3300046454 Bacteria 1386
155 Ga0495592_0237553 3300046454 Unclassified 1211
156 Ga0495590_0006411 3300046457 Bacteria 4591
157 Ga0495629_0010355 3300046459 Bacteria 6787
158 Ga0495629_0021513 3300046459 Bacteria 4602
159 Ga0495638_0024183 3300046460 Bacteria 3964
160 Ga0495651_0006865 3300046462 Bacteria 8698
161 Ga0495651_0008851 3300046462 Bacteria 7725
162 Ga0495651_0068390 3300046462 Bacteria 2707
163 Ga0495651_0203973 3300046462 Bacteria 1381
164 Ga0495653_0002132 3300046463 Bacteria 15606
165 Ga0495653_0044737 3300046463 Bacteria 3435
166 Ga0495580_0025431 3300046472 Bacteria 4326
167 Ga0495580_0176330 3300046472 Bacteria 1476
168 Ga0495639_0001261 3300046475 Bacteria 11406
169 Ga0495639_0005388 3300046475 Bacteria 5508
170 Ga0495639_0118133 3300046475 Unclassified 1263
171 Ga0495664_0004052 3300046477 Bacteria 7986
172 Ga0495664_0023930 3300046477 Plasmid 3546
173 Ga0495664_0135250 3300046477 Unclassified 1493
174 Ga0495606_0020254 3300046507 Bacteria 4913
175 Ga0495608_0017890 3300046511 Bacteria 4898
176 Ga0495608_0077684 3300046511 Bacteria 2161
177 Ga0495608_0115749 3300046511 Bacteria 1721
178 Ga0495618_0113395 3300046514 Bacteria 1736
179 Ga0495618_0134799 3300046514 Bacteria 1580
180 Ga0495618_0140261 3300046514 Bacteria 1546
181 Ga0495630_0010748 3300046517 Bacteria 6610
182 Ga0495630_0082210 3300046517 Unclassified 2431
183 Ga0495630_0199633 3300046517 Bacteria 1526
184 Ga0495630_0283287 3300046517 Bacteria 1266
185 Ga0495652_0197632 3300046529 Unclassified 1529
186 Ga0495652_0243541 3300046529 Bacteria 1336
187 Ga0495640_0007257 3300046533 Bacteria 8733
188 Ga0495640_0017152 3300046533 Bacteria 5404
189 Ga0495640_0022499 3300046533 Bacteria 4606
190 Ga0495640_0153641 3300046533 Unclassified 1478
191 Ga0495587_0017310 3300046536 Bacteria 4478
192 Ga0495587_0028301 3300046536 Bacteria 3408
193 Ga0495645_0018130 3300046543 Bacteria 5053
194 Ga0495645_0055143 3300046543 Bacteria 2886
195 Ga0495645_0107644 3300046543 Bacteria 1976
196 Ga0495667_0031586 3300046559 Bacteria 3553
197 Ga0495667_0296874 3300046559 Unclassified 1024
198 Ga0495668_0028522 3300046616 Bacteria 3157
199 Ga0495634_0015780 3300046642 Bacteria 5416
200 Ga0495634_0105138 3300046642 Unclassified 1820
201 Ga0495634_0194230 3300046642 Bacteria 1264
202 Ga0495625_0026731 3300046660 Bacteria 4354
203 Ga0495635_0003414 3300046663 Bacteria 10983
204 Ga0495657_0069944 3300046675 Bacteria 2294
205 Ga0495599_0008477 3300046678 Bacteria 6250
206 Ga0495599_0068471 3300046678 Bacteria 2216
207 Ga0495623_0019498 3300046679 Bacteria 4381
208 Ga0495623_0031406 3300046679 Bacteria 3414
209 Ga0495623_0042128 3300046679 Bacteria 2909
210 Ga0495646_0026725 3300046680 Bacteria 3623
211 Ga0495646_0057369 3300046680 Bacteria 2331
212 Ga0495658_0062785 3300046683 Unclassified 2136
213 Ga0495658_0082690 3300046683 Bacteria 1887
214 Ga0495613_0019404 3300046689 Bacteria 5067
215 Ga0495671_0027008 3300046692 Bacteria 2969
216 Ga0495600_0006184 3300046809 Bacteria 7260
217 Ga0495600_0042657 3300046809 Bacteria 2957
218 Ga0495581_0022475 3300047315 Bacteria 3655
219 Ga0495581_0041735 3300047315 Bacteria 2655
220 Ga0495581_0116748 3300047315 Unclassified 1552
221 Ga0495604_0005631 3300047317 Bacteria 9935
222 Ga0495604_0149393 3300047317 Bacteria 1661
223 Ga0495604_0159889 3300047317 Bacteria 1592
224 Ga0495674_0008248 3300047319 Bacteria 9939
225 Ga0495674_0013945 3300047319 Bacteria 7539
226 Ga0495674_0022042 3300047319 Bacteria 5878
227 Ga0495674_0075414 3300047319 Bacteria 2902
228 Ga0495674_0128067 3300047319 Unclassified 2140
229 Ga0495674_0275509 3300047319 Unclassified 1379
230 Ga0495676_0135230 3300047321 Bacteria 1774
231 Ga0495680_0022023 3300047322 Bacteria 5322
232 Ga0495680_0025781 3300047322 Bacteria 4860
233 Ga0495675_0016787 3300047444 Bacteria 4629
234 Ga0495675_0232709 3300047444 Bacteria 1111
235 Ga0495673_0007018 3300047469 Bacteria 6543
236 Ga0495684_0000297 3300047471 Bacteria 40486
237 Ga0495684_0022852 3300047471 Bacteria 4810
238 Ga0495684_0303237 3300047471 Bacteria 1147
239 Ga0495593_0011517 3300047673 Bacteria 5077
240 Ga0495593_0093202 3300047673 Bacteria 1550
241 Ga0495593_0192491 3300047673 Bacteria 1026
242 Ga0495602_0033522 3300048088 Bacteria 4816
243 Ga0495602_0043840 3300048088 Bacteria 4062
244 Ga0495602_0078035 3300048088 Bacteria 2799
245 Ga0495602_0222823 3300048088 Bacteria 1422
246 Ga0496100_0493896 3300048903 Bacteria 942
247 Ga0496101_0146263 3300048904 Bacteria 1805
248 Ga0496104_0282208 3300048907 Unclassified 1574
249 Ga0496106_0075400 3300048909 Bacteria 2583
250 Ga0496107_0078713 3300048910 Bacteria 2402
251 Ga0496108_0000867 3300048911 Bacteria 23580
252 Ga0496108_0155635 3300048911 Unclassified 1974
253 Ga0496109_0116905 3300048912 Unclassified 2482
254 Ga0496111_0053552 3300048914 Bacteria 2916
255 Ga0496112_0137624 3300048915 Bacteria 2412
256 Ga0496121_0002399 3300048924 Bacteria 28716
257 Ga0496126_0037838 3300048929 Bacteria 4495
258 Ga0496126_0068267 3300048929 Bacteria 3175
259 Ga0496126_0170905 3300048929 Bacteria 1852
260 nmdc:mga0yw44_121275_c1 3300050492 Bacteria 1684
261 nmdc:mga0yw44_20699_c1 3300050492 Bacteria 3656
262 nmdc:mga0yw44_98366_c1 3300050492 Bacteria 1860
263 nmdc:mga0k408_48378_c1 3300050493 Bacteria 2459
264 nmdc:mga06z11_2727_c1 3300050494 Bacteria 6770
265 nmdc:mga04h51_51107_c1 3300050495 Bacteria 1387
266 nmdc:mga04h51_5877_c1 3300050495 Bacteria 3147
267 nmdc:mga07m45_12537_c2 3300050496 Bacteria 1797
268 nmdc:mga08y16_370692_c1 3300050511 Unclassified 1469
269 nmdc:mga0n895_7189_c1 3300050512 Bacteria 9528
270 nmdc:mga0sz30_289_c1 3300050516 Bacteria 11337
271 Ga0495601_0046829 3300053077 Bacteria 2722
272 Ga0495612_0006134 3300053078 Bacteria 4946
273 Ga0495612_0024563 3300053078 Bacteria 2419
274 Ga0495612_0056366 3300053078 Bacteria 1622
275 Ga0495612_0063282 3300053078 Bacteria 1534
276 Ga0495595_0004439 3300053084 Bacteria 5646
277 Ga0495619_0012821 3300053085 Bacteria 5279
278 Ga0500651_0000454 3300053093 Bacteria 21894
279 Ga0500554_000347 3300053102 Bacteria 9942
280 Ga0500562_007188 3300053108 Bacteria 2810
281 Ga0500595_002419 3300053119 Bacteria 9317
282 Ga0500595_012587 3300053119 Bacteria 3266
283 Ga0500577_0029650 3300053142 Bacteria 1897
284 Ga0500603_000375 3300053150 Bacteria 11694
285 Ga0500604_0012222 3300053151 Bacteria 2316
286 Ga0500616_0022535 3300053153 Bacteria 3515
287 Ga0500622_0044679 3300053156 Bacteria 2296
288 Ga0500634_0019765 3300053161 Bacteria 3633
289 Ga0500637_0006254 3300053178 Bacteria 5847
290 2513670832 2513237098 Bacteria 9902361
291 2513721425 2513237104 Bacteria 10034502
292 2513723491 2513237104 Bacteria 10034502
293 2524467627 2524023210 Bacteria 9029266
294 2874611757 2874604998 Bacteria 7834745
295 2874611774 2874604998 Bacteria 7834745
296 2885386873 2885383462 Bacteria 9473874
297 2885414207 2885409591 Bacteria 9235467
298 2885416428 2885409591 Bacteria 9235467
299 2903755243 2903748898 Bacteria 9972761
300 2903769058 2903768456 Bacteria 9749579
301 2906611306
302 2932803898 2932801729 Bacteria 7987968
303 2935611248 2935608549 Bacteria 8203142
304 2935611251 2935608549 Bacteria 8203142
305 2935612372 2935608549 Bacteria 8203142
306 2935693493 2935684952 Bacteria 9590419
307 2935702948 2935694250 Bacteria 9291695
308 2935721683 2935713505 Bacteria 9608509
309 2935730987 2935722832 Bacteria 9608746
310 2935740822 2935732158 Bacteria 9706831
311 2935750086 2935741537 Bacteria 9707219
312 2935759476 2935750917 Bacteria 9590372
313 2935769653 2935760218 Bacteria 9817913
314 2935774522 2935769743 Bacteria 7878163
315 2935775819 2935769743 Bacteria 7878163
316 2935780754 2935777560 Bacteria 8077691
317 2935781814 2935777560 Bacteria 8077691
318 2935789462 2935785616 Bacteria 7962367
319 2935791444 2935785616 Bacteria 7962367
320 2935797495 2935793552 Bacteria 8012592
321 2935799680 2935793552 Bacteria 8012592
322 2935820726 2935819856 Bacteria 8261050
323 2935820729 2935819856 Bacteria 8261050
324 2935823861 2935819856 Bacteria 8261050
325 2935848968 2935847175 Bacteria 8228321
326 2935849253 2935847175 Bacteria 8228321
327 2935849256 2935847175 Bacteria 8228321
328 2935920406 2935916978 Bacteria 9113783
329 2935920407 2935916978 Bacteria 9113783
330 2935923888 2935916978 Bacteria 9113783
331 2940565380 2940556831 Bacteria 9590747
332 2941538220 2941531003 Bacteria 7653939
333 2941538438 2941531003 Bacteria 7653939
334 2941538449 2941531003 Bacteria 7653939
335 3005481642 3005474847 Bacteria 9259049
336 8016524207 8016522445 Bacteria 8156687
337 8016537755 8016530956 Bacteria 8155261
338 8016542037 8016539877 Bacteria 8155419
339 8016551247 8016548790 Bacteria 8155074
340 8016559640 8016557553 Bacteria 8154380
341 8016567413 8016566248 Bacteria 8158151
342 8016597580 8016595262 Bacteria 8149947
343 8016604732 8016603502 Bacteria 8731218
344 8016611711 8016603502 Bacteria 8731218
345 8016620280 8016613128 Bacteria 8794220
346 8016622087 8016613128 Bacteria 8794220
347 8016627763 8016622563 Bacteria 7999408
348 8016629725 8016622563 Bacteria 7999408
349 8019537428 8019530166 Bacteria 8155624
350 8019539140 8019538911 Bacteria 7872763
351 8019543902 8019538911 Bacteria 7872763
352 8019548664 8019547302 Bacteria 7996444
353 8019554868 8019547302 Bacteria 7996444
354 8019562837 8019555841 Bacteria 9642137
355 8019562838 8019555841 Bacteria 9642137
356 8019572913 8019565922 Bacteria 9639779
357 8019572914 8019565922 Bacteria 9639779
358 Ga0495648_0008822
359 JGI25404J52841_10000556
360 Ga0070680_100036519
361 Ga0070709_10008406
362 Ga0070709_10040216
363 Ga0070709_10097537
364 Ga0070714_100006831
365 Ga0070714_100142507
366 Ga0070714_100477214
367 Ga0070713_100005201
368 Ga0070713_100044906
369 Ga0070713_100059816
370 Ga0070713_100099593
371 Ga0070710_10000222
372 Ga0070710_10030039
373 Ga0070711_100002897
374 Ga0070711_100006454
375 Ga0070711_100013960
376 Ga0070711_100034748
377 Ga0070711_100048754
378 Ga0070707_100051176
379 Ga0070679_100005024
380 Ga0070697_100126808
381 Ga0070665_100035584
382 Ga0070665_100160780
383 Ga0068855_100030189
384 Ga0068862_100082586
385 Ga0081455_10005908
386 Ga0081455_10006574
387 Ga0081540_1001495
388 Ga0081540_1002056
389 Ga0081540_1002133
390 Ga0081540_1002391
391 Ga0081540_1005823
392 Ga0070717_10267477
393 Ga0075365_10025088
394 Ga0075365_10150005
395 Ga0075368_10015105
396 Ga0070715_10038382
397 Ga0070716_100006195
398 Ga0070716_100031757
399 Ga0070716_100043233
400 Ga0070712_100034334
401 Ga0070712_100308914
402 Ga0075362_10064142
403 Ga0075367_10020018
404 Ga0075367_10063729
405 Ga0075369_10002934
406 Ga0075370_10049502
407 Ga0075370_10055639
408 Ga0075434_100086547
409 Ga0099794_10023453
410 Ga0099794_10079376
411 Ga0099795_10038016
412 Ga0099795_10040448
413 Ga0111539_10301405
414 Ga0105237_10006794
415 Ga0105238_10000676
416 Ga0099796_10063531
417 Ga0105239_10015846
418 Ga0157374_10082320
419 Ga0163162_10251596
420 Ga0157379_10281394
421 Ga0213876_10017480
422 Ga0213875_10076767
423 Ga0209677_100598
424 Ga0209148_1008210
425 Ga0209455_1009626
426 Ga0207692_10000339
427 Ga0207692_10040020
428 Ga0207699_10003473
429 Ga0207699_10006114
430 Ga0207699_10059121
431 Ga0207699_10308097
432 Ga0207684_10190985
433 Ga0207671_10029834
434 Ga0207693_10005417
435 Ga0207693_10046736
436 Ga0207693_10124941
437 Ga0207663_10001675
438 Ga0207663_10241249
439 Ga0207663_10334733
440 Ga0207663_10334734
441 Ga0207646_10190297
442 Ga0207694_10039664
443 Ga0207700_10052019
444 Ga0207700_10075130
445 Ga0207700_10099483
446 Ga0207664_10020528
447 Ga0207665_10008495
448 Ga0207665_10126275
449 Ga0207665_10212135
450 Ga0207667_10074854
451 Ga0209179_1001859
452 Ga0207428_10204574
453 Ga0268266_10094270
454 Ga0268265_10100068
455 Ga0373944_0022429
456 Ga0373936_0020961
457 Ga0373936_0030180
458 Ga0373953_0001530
459 Ga0373953_0098218
460 Ga0373954_0006783
461 Ga0373954_0113657
462 Ga0373956_0003754
463 Ga0373956_0016606
464 Ga0373943_0016429
465 Ga0373946_0033111
466 Ga0373946_0066269
467 Ga0373955_0006438
468 Ga0373955_0062289
469 Ga0373955_0083893
470 Ga0373955_0124232
471 Ga0373924_0004247
472 Ga0373924_0031906
473 Ga0373924_0046656
474 Ga0373935_0000221
475 Ga0373935_0067453
476 Ga0373935_0144735
477 Ga0373935_0275727
478 Ga0373927_0022470
479 Ga0373927_0022595
480 Ga0373927_0040731
481 Ga0373927_0070163
482 Ga0373927_0106992
483 Ga0373933_0011506
484 Ga0373933_0021083
485 Ga0373947_0004728
486 Ga0373947_0143340
487 Ga0373937_0077982
488 Ga0373937_0101211
489 Ga0373937_0530614
490 Ga0373925_0003263
491 Ga0373925_0040182
492 Ga0373925_0106730
493 Ga0373925_0115608
494 Ga0373925_0126595
495 Ga0395900_0131484
496 Ga0395898_0068923
497 Ga0395905_0052957
498 Ga0395905_0113955
499 Ga0395905_0163043
500 Ga0395905_0555621
501 Ga0395901_0222585
502 Ga0436365_1076445
503 Ga0436365_1311311
504 Ga0436361_0636856
505 Ga0436363_0338237
506 Ga0436363_0410452
507 Ga0436362_1046746
508 Ga0436362_1302693
509 Ga0495592_0007242
510 Ga0495592_0023552
511 Ga0495592_0191367
512 Ga0495592_0237553
513 Ga0495590_0006411
514 Ga0495629_0010355
515 Ga0495629_0021513
516 Ga0495638_0024183
517 Ga0495651_0006865
518 Ga0495651_0008851
519 Ga0495651_0068390
520 Ga0495651_0203973
521 Ga0495653_0002132
522 Ga0495653_0044737
523 Ga0495580_0025431
524 Ga0495580_0176330
525 Ga0495639_0001261
526 Ga0495639_0005388
527 Ga0495639_0118133
528 Ga0495664_0004052
529 Ga0495664_0023930
530 Ga0495664_0135250
531 Ga0495606_0020254
532 Ga0495608_0017890
533 Ga0495608_0077684
534 Ga0495608_0115749
535 Ga0495618_0113395
536 Ga0495618_0134799
537 Ga0495618_0140261
538 Ga0495630_0010748
539 Ga0495630_0082210
540 Ga0495630_0199633
541 Ga0495630_0283287
542 Ga0495652_0197632
543 Ga0495652_0243541
544 Ga0495640_0007257
545 Ga0495640_0017152
546 Ga0495640_0022499
547 Ga0495640_0153641
548 Ga0495587_0017310
549 Ga0495587_0028301
550 Ga0495645_0018130
551 Ga0495645_0055143
552 Ga0495645_0107644
553 Ga0495667_0031586
554 Ga0495667_0296874
555 Ga0495668_0028522
556 Ga0495634_0015780
557 Ga0495634_0105138
558 Ga0495634_0194230
559 Ga0495625_0026731
560 Ga0495635_0003414
561 Ga0495657_0069944
562 Ga0495599_0008477
563 Ga0495599_0068471
564 Ga0495623_0019498
565 Ga0495623_0031406
566 Ga0495623_0042128
567 Ga0495646_0026725
568 Ga0495646_0057369
569 Ga0495658_0062785
570 Ga0495658_0082690
571 Ga0495613_0019404
572 Ga0495671_0027008
573 Ga0495600_0006184
574 Ga0495600_0042657
575 Ga0495581_0022475
576 Ga0495581_0041735
577 Ga0495581_0116748
578 Ga0495604_0005631
579 Ga0495604_0149393
580 Ga0495604_0159889
581 Ga0495674_0008248
582 Ga0495674_0013945
583 Ga0495674_0022042
584 Ga0495674_0075414
585 Ga0495674_0128067
586 Ga0495674_0275509
587 Ga0495676_0135230
588 Ga0495680_0022023
589 Ga0495680_0025781
590 Ga0495675_0016787
591 Ga0495675_0232709
592 Ga0495673_0007018
593 Ga0495684_0000297
594 Ga0495684_0022852
595 Ga0495684_0303237
596 Ga0495593_0011517
597 Ga0495593_0093202
598 Ga0495593_0192491
599 Ga0495602_0033522
600 Ga0495602_0043840
601 Ga0495602_0078035
602 Ga0495602_0222823
603 Ga0496100_0493896
604 Ga0496101_0146263
605 Ga0496104_0282208
606 Ga0496106_0075400
607 Ga0496107_0078713
608 Ga0496108_0000867
609 Ga0496108_0155635
610 Ga0496109_0116905
611 Ga0496111_0053552
612 Ga0496112_0137624
613 Ga0496121_0002399
614 Ga0496126_0037838
615 Ga0496126_0068267
616 Ga0496126_0170905
617 nmdc:mga0yw44_121275_c1
618 nmdc:mga0yw44_20699_c1
619 nmdc:mga0yw44_98366_c1
620 nmdc:mga0k408_48378_c1
621 nmdc:mga06z11_2727_c1
622 nmdc:mga04h51_51107_c1
623 nmdc:mga04h51_5877_c1
624 nmdc:mga07m45_12537_c2
625 nmdc:mga08y16_370692_c1
626 nmdc:mga0n895_7189_c1
627 nmdc:mga0sz30_289_c1
628 Ga0495601_0046829
629 Ga0495612_0006134
630 Ga0495612_0024563
631 Ga0495612_0056366
632 Ga0495612_0063282
633 Ga0495595_0004439
634 Ga0495619_0012821
635 Ga0500651_0000454
636 Ga0500554_000347
637 Ga0500562_007188
638 Ga0500595_002419
639 Ga0500595_012587
640 Ga0500577_0029650
641 Ga0500603_000375
642 Ga0500604_0012222
643 Ga0500616_0022535
644 Ga0500622_0044679
645 Ga0500634_0019765
646 Ga0500637_0006254
647 2513670832
648 2513721425
649 2513723491
650 2524467627
651 2874611757
652 2874611774
653 2885386873
654 2885414207
655 2885416428
656 2903755243
657 2903769058
658 2906611306
659 2932803898
660 2935611248
661 2935611251
662 2935612372
663 2935693493
664 2935702948
665 2935721683
666 2935730987
667 2935740822
668 2935750086
669 2935759476
670 2935769653
671 2935774522
672 2935775819
673 2935780754
674 2935781814
675 2935789462
676 2935791444
677 2935797495
678 2935799680
679 2935820726
680 2935820729
681 2935823861
682 2935848968
683 2935849253
684 2935849256
685 2935920406
686 2935920407
687 2935923888
688 2940565380
689 2941538220
690 2941538438
691 2941538449
692 3005481642
693 8016524207
694 8016537755
695 8016542037
696 8016551247
697 8016559640
698 8016567413
699 8016597580
700 8016604732
701 8016611711
702 8016620280
703 8016622087
704 8016627763
705 8016629725
706 8019537428
707 8019539140
708 8019543902
709 8019548664
710 8019554868
711 8019562837
712 8019562838
713 8019572913
714 8019572914

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

281

363

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w5w-assembly1.cif.gz_J cryo-em structure of soxs-dependent transcription activation complex with micf promoter dna 0.8689 201 308
3oou-assembly1.cif.gz_A the structure of a protein with unkown function from listeria innocua 0.8488 204 305
7w5w-assembly1.cif.gz_J cryo-em structure of soxs-dependent transcription activation complex with micf promoter dna 0.8474 201 308
7w5x-assembly1.cif.gz_K cryo-em structure of soxs-dependent transcription activation complex with zwf promoter dna 0.8367 201 308
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.8317 204 306
ID Description Score Start End Superfamily
af_P36547_236_347_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8971 200 305 1.10.10.60
af_P36547_1_235_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8769 3 195 2.60.120.10
af_Q47129_192_301_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.876 200 307 1.10.10.60
af_P09377_170_274_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8602 203 305 1.10.10.60
af_P77379_178_282_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8539 207 305 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A1H8JW92-F1-model_v4 AraC-type DNA-binding protein 0.9742 3 312 GO:0003700
GO:0043565
AF-A0A357MXS4-F1-model_v4 AraC family transcriptional regulator 0.9681 221 311 GO:0003700
GO:0043565
AF-A0A176NT20-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9587 217 308 GO:0003700
GO:0043565
AF-A0A6G6Z752-F1-model_v4 Helix-turn-helix domain-containing protein 0.9334 2 315 GO:0003700
GO:0043565
AF-A0A1Q3VEX4-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9282 3 308 GO:0003700
GO:0043565

Map