F421192

General Info

Members Datasets Scaffolds Average Seq Length
358 261 234 205

Family's Representative Sequence

Representative Sequence 3300014497|Ga0182008_10040125|Ga0182008_100401252
Length 224
Sequence LFFSANLRKFPVVGNFSMEDTKARVYIIDDDDAVRDSLSLQLEASGYEVASFPSAVGFLEIAGTLQPGCVISDVQMPDMDGMELQQCLSDMKLDFPVVIVTGHADVALAVRAMKAGAVDFIEKPFEARAILDSVRHAQTRFAAQRATAQAGATAREKLATLTPREREVFDEMVRGKQNKMIAFDLDISPRTVEVHRARVLEKLEARSLSELVRLALTAGLPISS

Samples

Sample ID Description Type Environment
1 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
2 2509276019 Ensifer aridi TW10 Isolate Nodule
3 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
4 2510917026 Rhizobium sp. CF80 Isolate Rhizosphere
5 2511231052 Sinorhizobium meliloti AK58 Isolate Nodule
6 2512875024 Mesorhizobium loti R88b Isolate Nodule
7 2513237086 Sinorhizobium meliloti MVII-I Isolate Nodule
8 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
9 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
10 2551306085 Sinorhizobium meliloti AE608H Isolate Nodule
11 2551306089 Sinorhizobium meliloti 1A42 Isolate Nodule
12 2551306090 Sinorhizobium meliloti A0641M Isolate Nodule
13 2551306092 Sinorhizobium meliloti AK75 Isolate Nodule
14 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
15 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
16 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
17 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
18 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
19 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
20 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
21 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
22 2600255279 Rhizobium sp. NFIX01 Isolate Rhizoplane
23 2600255308 Rhizobium sp. NFIX02 Isolate Rhizoplane
24 2643221550 Mesorhizobium sp. Root552 Isolate Unclassified
25 2643221610 Ensifer sp. Root74 Isolate Unclassified
26 2643221623 Aminobacter sp. DSM 101952 Root100 Isolate Unclassified
27 2643221675 Ensifer sp. Root1298 Isolate Unclassified
28 2643221680 Ensifer sp. Root1312 Isolate Unclassified
29 2643221726 Ensifer sp. Root954 Isolate Unclassified
30 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
31 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
32 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
33 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
34 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
35 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
36 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
37 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
38 2855839649 Sinorhizobium meliloti AK555 Isolate Unclassified
39 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
40 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
41 2906626472 Bradyrhizobium hipponense aSej3 Isolate Unclassified
42 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
43 2915986958 Sinorhizobium meliloti USDA1659 Isolate Nodule
44 2915993759 Sinorhizobium meliloti USDA1336 Isolate Nodule
45 2916035215 Sinorhizobium meliloti 3011 Isolate Nodule
46 2916068649 Sinorhizobium meliloti USDA1220 Isolate Nodule
47 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
48 2921201388 Sinorhizobium meliloti USDA1692 Isolate Nodule
49 2921208531 Sinorhizobium meliloti USDA1660 Isolate Nodule
50 2921289301 Sinorhizobium meliloti USDA1730 Isolate Nodule
51 2921296804 Sinorhizobium meliloti USDA1200 Isolate Nodule
52 2924150972 Sinorhizobium meliloti USDA1700 Isolate Nodule
53 2924158325 Sinorhizobium meliloti USDA1146 Isolate Nodule
54 2924165586 Sinorhizobium meliloti USDA1264 Isolate Nodule
55 2924186466 Sinorhizobium meliloti USDA1389 Isolate Nodule
56 2924193448 Sinorhizobium meliloti USDA1158 Isolate Nodule
57 2924214083 Sinorhizobium meliloti USDA1702 Isolate Nodule
58 2924221636 Sinorhizobium meliloti USDA1416 Isolate Nodule
59 2924228884 Sinorhizobium meliloti USDA1581 Isolate Nodule
60 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
61 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
62 2936996657 Sinorhizobium meliloti USDA1025 Isolate Nodule
63 2937049772 Sinorhizobium meliloti USDA1691 Isolate Nodule
64 2937056579 Sinorhizobium meliloti USDA1357 Isolate Nodule
65 2937063883 Sinorhizobium meliloti USDA1808 Isolate Nodule
66 2937091812 Sinorhizobium meliloti USDA1221 Isolate Nodule
67 2937098957 Sinorhizobium meliloti USDA1519 Isolate Nodule
68 2937106411 Sinorhizobium meliloti USDA1214 Isolate Nodule
69 2937113482 Sinorhizobium meliloti USDA1180 Isolate Nodule
70 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
71 2957388812 Sinorhizobium meliloti USDA1195 Isolate Nodule
72 2957415311 Sinorhizobium meliloti USDA1724 Isolate Nodule
73 2957422303 Sinorhizobium meliloti USDA1497 Isolate Nodule
74 2957430029 Sinorhizobium meliloti USDA1590 Isolate Nodule
75 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
76 2957457609 Sinorhizobium meliloti USDA1751 Isolate Nodule
77 2957484790 Sinorhizobium meliloti USDA1464 Isolate Nodule
78 2957505466 Sinorhizobium meliloti USDA1696 Isolate Nodule
79 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
80 2960637947 Sinorhizobium meliloti USDA1202 Isolate Nodule
81 2960645483 Sinorhizobium meliloti USDA1703 Isolate Nodule
82 2960652885 Sinorhizobium meliloti USDA1199 Isolate Nodule
83 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
84 2960674078 Sinorhizobium meliloti USDA1666 Isolate Nodule
85 2964607997 Sinorhizobium meliloti USDA1212 Isolate Nodule
86 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
87 2964643177 Sinorhizobium meliloti USDA1760 Isolate Nodule
88 2964649959 Sinorhizobium meliloti USDA1591 Isolate Nodule
89 2964656573 Sinorhizobium meliloti USDA1308 Isolate Nodule
90 2964698721 Sinorhizobium meliloti USDA1656 Isolate Nodule
91 2967664464 Sinorhizobium meliloti USDA1208 Isolate Nodule
92 2967671571 Sinorhizobium meliloti USDA1496 Isolate Nodule
93 2967678726 Sinorhizobium meliloti USDA1467 Isolate Nodule
94 2967706974 Sinorhizobium meliloti USDA1206 Isolate Nodule
95 2967714385 Sinorhizobium meliloti USDA1023 Isolate Nodule
96 2967721400 Sinorhizobium meliloti USDA1742 Isolate Nodule
97 2967735183 Sinorhizobium meliloti USDA1710 Isolate Nodule
98 2970019648 Sinorhizobium meliloti USDA1603 Isolate Nodule
99 2970033650 Sinorhizobium meliloti USDA1565 Isolate Nodule
100 2970040964 Sinorhizobium meliloti USDA1501 Isolate Nodule
101 2970047711 Sinorhizobium meliloti USDA1793 Isolate Nodule
102 2970054988 Sinorhizobium meliloti USDA1031 Isolate Nodule
103 2970061556 Sinorhizobium meliloti USDA1810 Isolate Nodule
104 2970068827 Sinorhizobium meliloti USDA1227 Isolate Nodule
105 2970088815 Sinorhizobium meliloti USDA1819 Isolate Nodule
106 2970116247 Sinorhizobium meliloti USDA1566 Isolate Nodule
107 2970136068 Sinorhizobium meliloti USDA1699 Isolate Nodule
108 2970149975 Sinorhizobium meliloti USDA1215 Isolate Nodule
109 2970156795 Sinorhizobium meliloti USDA1491 Isolate Nodule
110 2970184632 Sinorhizobium meliloti USDA1593 Isolate Nodule
111 2970191845 Sinorhizobium meliloti USDA1187 Isolate Nodule
112 2977516862 Sinorhizobium meliloti USDA1791 Isolate Nodule
113 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
114 2977537788 Sinorhizobium meliloti USDA1184 Isolate Nodule
115 2977551784 Sinorhizobium meliloti USDA1035 Isolate Nodule
116 2977565890 Sinorhizobium meliloti USDA1617 Isolate Nodule
117 2977572785 Sinorhizobium meliloti USDA1767 Isolate Nodule
118 2977579622 Sinorhizobium meliloti USDA1161 Isolate Nodule
119 2979100975 Agrobacterium pusense SORGH_AS 755 Isolate Unclassified
120 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
121 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
122 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
123 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
124 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
125 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
126 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
127 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
128 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
129 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
130 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
131 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
132 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
133 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
134 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
135 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
136 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
137 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
138 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
139 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
140 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
141 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
142 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
143 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
144 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
145 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
146 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
147 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
148 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
149 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
150 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
151 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
152 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
153 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
154 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
155 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
156 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
157 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
158 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
159 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
160 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
161 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
162 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
163 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
164 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
165 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
166 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
167 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
168 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
169 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
170 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
171 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
172 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
173 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
174 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
175 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
176 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
177 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
178 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
179 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
180 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
181 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
182 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
183 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
184 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
185 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
186 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
187 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
188 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
189 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
190 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
191 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
192 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
193 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
194 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
195 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
196 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
197 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
198 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
199 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
200 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
201 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
202 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
203 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
204 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
205 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
206 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
207 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
208 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
209 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
210 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
211 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
212 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
213 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
214 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
215 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
216 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
217 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
218 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
219 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
220 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
222 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
223 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
224 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
225 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
226 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
227 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
228 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
229 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
230 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
231 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
232 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
233 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
234 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
235 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
236 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
237 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
238 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
239 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
240 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
241 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
242 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
243 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
244 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
245 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
246 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
247 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
248 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
249 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
250 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
251 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
252 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
253 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
254 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
255 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
256 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
257 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
258 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
259 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
260 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
261 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 64.8
Metatranscriptomes 0.56
Isolates 34.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.34
Nodule 26.26
Rhizoplane 1.4
Rhizosphere 53.35
Stem 0
Stem Tuber 0
Unclassified 8.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1002508 3300002739 Bacteria 2974
2 JGI25159J45721_1000240 3300002987 Bacteria 25881
3 JGI25153J46596_10050992 3300003215 Bacteria 1188
4 rootH2_10089532 3300003320 Bacteria 1353
5 rootH1_10023168 3300003323 Bacteria 8169
6 JGI25160J50197_1000443 3300003354 Bacteria 25881
7 JGI25161J50226_1000376 3300003374 Bacteria 22449
8 Ga0055540_1006255 3300003792 Bacteria 4766
9 Ga0055531_10001661 3300003794 Bacteria 16056
10 Ga0055531_10022487 3300003794 Bacteria 2399
11 Ga0058692_1004995 3300003856 Bacteria 3839
12 Ga0055543_1000435 3300004625 Bacteria 25798
13 Ga0065165_1001429 3300005262 Bacteria 25919
14 Ga0070683_100631940 3300005329 Bacteria 1025
15 Ga0070666_10010848 3300005335 Bacteria 5708
16 Ga0070680_100100814 3300005336 Bacteria 2397
17 Ga0070669_100249787 3300005353 Bacteria 1412
18 Ga0070669_100402431 3300005353 Bacteria 1120
19 Ga0070659_100069387 3300005366 Bacteria 2798
20 Ga0070713_100095082 3300005436 Bacteria 2570
21 Ga0070663_100110535 3300005455 Bacteria 2064
22 Ga0070681_10147301 3300005458 Bacteria 2283
23 Ga0070679_100069722 3300005530 Bacteria 3507
24 Ga0070679_100080596 3300005530 Bacteria 3244
25 Ga0070665_100000119 3300005548 Bacteria 148727
26 Ga0070665_100037104 3300005548 Bacteria 4901
27 Ga0068855_100842771 3300005563 Bacteria 972
28 Ga0068859_100114786 3300005617 Bacteria 2757
29 Ga0068858_100276249 3300005842 Bacteria 1599
30 Ga0081540_1076978 3300005983 Bacteria 1518
31 Ga0075365_10002021 3300006038 Bacteria 9632
32 Ga0075362_10124771 3300006177 Bacteria 1221
33 Ga0075367_10016902 3300006178 Bacteria 3993
34 Ga0097621_100279203 3300006237 Bacteria 1470
35 Ga0097620_100114784 3300006931 Bacteria 2757
36 Ga0099826_10000220 3300006948 Bacteria 24821
37 Ga0105240_10000842 3300009093 Bacteria 55187
38 Ga0105240_10082491 3300009093 Bacteria 3948
39 Ga0105240_10222127 3300009093 Bacteria 2200
40 Ga0105242_10607181 3300009176 Bacteria 1058
41 Ga0105239_10299431 3300010375 Bacteria 1811
42 Ga0105239_10390063 3300010375 Bacteria 1575
43 Ga0157369_10002099 3300013105 Bacteria 24041
44 Ga0157374_10921109 3300013296 Bacteria 892
45 Ga0157372_10591700 3300013307 Bacteria 1293
46 Ga0182008_10040125 3300014497 Bacteria 2338
47 Ga0182005_1047383 3300015265 Unclassified 1168
48 Ga0206353_10594942 3300020082 Bacteria 1939
49 Ga0214544_1000017 3300021320 Bacteria 193638
50 Ga0214542_1000006 3300021321 Bacteria 345164
51 Ga0214543_1000014 3300021327 Bacteria 324986
52 Ga0224712_10024011 3300022467 Bacteria 2124
53 Ga0209436_101079 3300025208 Bacteria 10244
54 Ga0209130_1000553 3300025284 Bacteria 37292
55 Ga0209676_1007916 3300025292 Bacteria 4868
56 Ga0209758_1000688 3300025297 Bacteria 50116
57 Ga0209758_1015707 3300025297 Bacteria 3901
58 Ga0209050_1012807 3300025298 Bacteria 3799
59 Ga0207426_1001053 3300025302 Bacteria 26178
60 Ga0209051_1001404 3300025303 Bacteria 20712
61 Ga0209257_1004666 3300025304 Bacteria 10311
62 Ga0209257_1005699 3300025304 Bacteria 8553
63 Ga0207707_10049960 3300025912 Bacteria 3644
64 Ga0207695_10031109 3300025913 Bacteria 5861
65 Ga0207695_10131135 3300025913 Bacteria 2464
66 Ga0207671_10472389 3300025914 Bacteria 999
67 Ga0207693_10261286 3300025915 Bacteria 1357
68 Ga0207660_10026667 3300025917 Bacteria 3936
69 Ga0207660_10085340 3300025917 Bacteria 2329
70 Ga0207652_10029122 3300025921 Bacteria 4614
71 Ga0207652_10210082 3300025921 Bacteria 1752
72 Ga0207681_10417560 3300025923 Bacteria 1086
73 Ga0207690_10014665 3300025932 Bacteria 4737
74 Ga0207667_10771108 3300025949 Bacteria 960
75 Ga0207668_10553309 3300025972 Bacteria 997
76 Ga0207640_10259240 3300025981 Bacteria 1354
77 Ga0207703_10576568 3300026035 Bacteria 1063
78 Ga0207678_10290303 3300026067 Bacteria 1405
79 Ga0209371_1001957 3300027312 Bacteria 12483
80 Ga0209282_1000312 3300027666 Bacteria 24101
81 Ga0268266_10000003 3300028379 Bacteria 1701703
82 Ga0268266_10104470 3300028379 Bacteria 2501
83 Ga0307515_10000307 3300028794 Bacteria 121172
84 Ga0307515_10001253 3300028794 Bacteria 57911
85 Ga0265338_10023697 3300028800 Bacteria 6297
86 Ga0268256_1004214 3300030500 Bacteria 6060
87 Ga0265327_10000772 3300031251 Bacteria 49388
88 Ga0307408_100472089 3300031548 Bacteria 1093
89 Ga0373934_0193299 3300035086 Bacteria 837
90 Ga0373927_0018141 3300035695 Bacteria 4628
91 Ga0373937_0015136 3300036401 Bacteria 6816
92 Ga0373925_0559116 3300037068 Bacteria 941
93 Ga0395899_0139525 3300037312 Bacteria 1726
94 Ga0395900_0009835 3300037418 Bacteria 9796
95 Ga0395898_0662760 3300037466 Bacteria 986
96 Ga0395901_0007380 3300038443 Bacteria 11093
97 Ga0395901_0672882 3300038443 Bacteria 1036
98 Ga0495632_0118866 3300046519 Bacteria 1236
99 Ga0495668_0075539 3300046616 Bacteria 1851
100 Ga0495625_0006646 3300046660 Bacteria 10263
101 Ga0495686_0032786 3300047472 Bacteria 3360
102 Ga0496115_0003992 3300048918 Bacteria 10645
103 Ga0496117_0000277 3300048920 Bacteria 95538
104 Ga0496118_0001237 3300048921 Bacteria 39268
105 Ga0496120_0001451 3300048923 Bacteria 28342
106 Ga0496122_0000505 3300048925 Bacteria 80571
107 Ga0496123_0000400 3300048926 Bacteria 80571
108 Ga0496124_0229767 3300048927 Bacteria 1388
109 Ga0496126_0000574 3300048929 Bacteria 70089
110 Ga0496126_0312288 3300048929 Bacteria 1294
111 Ga0501031_0000010 3300049568 Bacteria 146435
112 Ga0501031_0019564 3300049568 Bacteria 4410
113 Ga0501031_0050197 3300049568 Bacteria 2718
114 Ga0501031_0143722 3300049568 Bacteria 1559
115 Ga0501031_0180471 3300049568 Bacteria 1379
116 Ga0501032_0000023 3300049569 Bacteria 146435
117 Ga0501032_0003527 3300049569 Bacteria 11945
118 Ga0501032_0043679 3300049569 Bacteria 3034
119 Ga0501032_0169437 3300049569 Bacteria 1432
120 Ga0501033_0000104 3300049570 Bacteria 81029
121 Ga0501033_0000481 3300049570 Bacteria 37583
122 Ga0501033_0005738 3300049570 Bacteria 9782
123 Ga0501033_0156388 3300049570 Bacteria 1643
124 Ga0501033_0191293 3300049570 Bacteria 1464
125 Ga0501033_0196630 3300049570 Bacteria 1441
126 Ga0501033_0275990 3300049570 Bacteria 1187
127 Ga0501033_0317595 3300049570 Bacteria 1094
128 Ga0501034_0000116 3300049571 Bacteria 146442
129 Ga0501034_0001737 3300049571 Bacteria 27988
130 Ga0501034_0098946 3300049571 Bacteria 2912
131 Ga0501034_0186244 3300049571 Bacteria 2039
132 Ga0501034_0690651 3300049571 Unclassified 920
133 Ga0501036_0000015 3300049572 Bacteria 146442
134 Ga0501036_0005744 3300049572 Bacteria 10065
135 Ga0501036_0046654 3300049572 Bacteria 3668
136 Ga0501036_0067788 3300049572 Bacteria 3019
137 Ga0501036_0118398 3300049572 Bacteria 2237
138 Ga0501036_0238501 3300049572 Bacteria 1525
139 Ga0501036_0397111 3300049572 Bacteria 1150
140 Ga0501036_0744350 3300049572 Bacteria 809
141 Ga0501037_0000023 3300049573 Bacteria 146542
142 Ga0501037_0036842 3300049573 Bacteria 3605
143 Ga0501037_0103215 3300049573 Bacteria 2056
144 Ga0501037_0201745 3300049573 Bacteria 1405
145 Ga0501038_0000025 3300049574 Bacteria 146542
146 Ga0501038_0158424 3300049574 Bacteria 1842
147 Ga0501038_0221385 3300049574 Bacteria 1510
148 Ga0501038_0565429 3300049574 Bacteria 863
149 Ga0501039_0000037 3300049575 Bacteria 122286
150 Ga0501039_0082180 3300049575 Bacteria 2508
151 Ga0501039_0387000 3300049575 Bacteria 1098
152 Ga0501040_0004031 3300049576 Bacteria 9542
153 Ga0501043_0000070 3300049579 Bacteria 89839
154 Ga0501043_0001898 3300049579 Bacteria 17912
155 Ga0501043_0042114 3300049579 Bacteria 3587
156 Ga0501043_0078400 3300049579 Bacteria 2596
157 Ga0501043_0093348 3300049579 Bacteria 2366
158 Ga0501043_0127260 3300049579 Bacteria 1997
159 Ga0501043_0614895 3300049579 Bacteria 801
160 Ga0501046_0162716 3300049580 Bacteria 1678
161 Ga0501046_0259995 3300049580 Bacteria 1276
162 Ga0501047_0005196 3300049581 Bacteria 12220
163 Ga0501047_0006480 3300049581 Bacteria 11015
164 Ga0501047_0008856 3300049581 Bacteria 9495
165 Ga0501047_0048088 3300049581 Bacteria 4120
166 Ga0501047_0051388 3300049581 Bacteria 3982
167 Ga0501047_0072739 3300049581 Bacteria 3309
168 Ga0501047_0504921 3300049581 Bacteria 1036
169 Ga0501048_0099225 3300049582 Bacteria 2055
170 Ga0501069_0335414 3300049585 Bacteria 890
171 Ga0501070_0011774 3300049586 Bacteria 7387
172 Ga0501070_0080508 3300049586 Bacteria 2695
173 Ga0501070_0128214 3300049586 Bacteria 2096
174 Ga0501070_0166495 3300049586 Bacteria 1816
175 Ga0501070_0339457 3300049586 Bacteria 1220
176 Ga0501072_0101591 3300049588 Bacteria 2286
177 Ga0501073_0264318 3300049589 Bacteria 1187
178 Ga0501074_0021769 3300049590 Bacteria 4655
179 Ga0501074_0613571 3300049590 Bacteria 769
180 Ga0501075_0092653 3300049591 Bacteria 2293
181 Ga0501076_0071089 3300049592 Bacteria 2783
182 Ga0501198_020736 3300049649 Bacteria 1043
183 Ga0501238_004598 3300049671 Bacteria 1730
184 Ga0501238_013868 3300049671 Bacteria 1101
185 Ga0501249_000249 3300049679 Bacteria 15913
186 Ga0501079_0010630 3300049741 Bacteria 7005
187 Ga0501079_0886506 3300049741 Bacteria 703
188 Ga0501080_0042257 3300049742 Bacteria 4245
189 Ga0501080_0064174 3300049742 Bacteria 3417
190 Ga0501080_0138994 3300049742 Bacteria 2246
191 Ga0501080_0348388 3300049742 Bacteria 1338
192 Ga0501080_0381369 3300049742 Bacteria 1270
193 Ga0501080_0675613 3300049742 Bacteria 912
194 Ga0501081_0010983 3300049743 Bacteria 5919
195 Ga0501083_0060550 3300049744 Bacteria 2529
196 Ga0501035_0000074 3300049822 Bacteria 122269
197 Ga0501035_0001099 3300049822 Bacteria 28343
198 Ga0501035_0003095 3300049822 Bacteria 15978
199 Ga0501035_0004312 3300049822 Bacteria 13517
200 Ga0501035_0025801 3300049822 Bacteria 5386
201 Ga0501035_0079139 3300049822 Bacteria 2903
202 Ga0501035_0176731 3300049822 Bacteria 1841
203 Ga0501035_0557882 3300049822 Bacteria 937
204 Ga0501044_0000069 3300049823 Bacteria 125974
205 Ga0501044_0000505 3300049823 Bacteria 47475
206 Ga0501044_0009510 3300049823 Bacteria 10581
207 Ga0501044_0029819 3300049823 Bacteria 5751
208 Ga0501044_0033694 3300049823 Bacteria 5380
209 Ga0501044_0063352 3300049823 Bacteria 3777
210 Ga0501044_0063554 3300049823 Bacteria 3770
211 Ga0501044_0098833 3300049823 Bacteria 2938
212 Ga0501044_0127138 3300049823 Bacteria 2545
213 Ga0501044_0132816 3300049823 Bacteria 2482
214 Ga0501044_0175764 3300049823 Bacteria 2110
215 Ga0501044_0741110 3300049823 Bacteria 865
216 nmdc:mga03n38_169685_c1 3300050490 Bacteria 1111
217 nmdc:mga0yw44_240430_c1 3300050492 Bacteria 1203
218 nmdc:mga0yw44_546_c1 3300050492 Bacteria 13524
219 Ga0500595_029024 3300053119 Bacteria 1881
220 Ga0500608_023027 3300053122 Bacteria 2894
221 Ga0500618_003741 3300053125 Bacteria 5096
222 Ga0500559_0014382 3300053136 Bacteria 3344
223 Ga0500559_0044213 3300053136 Bacteria 1948
224 Ga0500564_185335 3300053138 Bacteria 865
225 Ga0500616_0000102 3300053153 Bacteria 168834
226 Ga0500616_0022764 3300053153 Bacteria 3496
227 Ga0500622_0000101 3300053156 Bacteria 86856
228 Ga0500627_0015828 3300053158 Bacteria 2926
229 Ga0500627_0056274 3300053158 Bacteria 1724
230 Ga0501084_0007831 3300054114 Bacteria 8792
231 Ga0590075_070337 3300059424 Bacteria 904
232 Ga0501082_0094600 3300060353 Bacteria 2582
233 Ga0501082_0536848 3300060353 Bacteria 1023
234 Ga0530510_0153333 3300061734 Bacteria 1702

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003323 rootH1_10023168 rootH1_100231686 171
2 3300049649 Ga0501198_020736 Ga0501198_020736_458_1018 183
3 iso_pu_bacteria 2964649959 2964654465 186
4 3300005353 Ga0070669_100249787 Ga0070669_1002497872 187
5 3300010375 Ga0105239_10299431 Ga0105239_102994312 187
6 3300025972 Ga0207668_10553309 Ga0207668_105533092 187
7 3300025981 Ga0207640_10259240 Ga0207640_102592402 187
8 3300026067 Ga0207678_10290303 Ga0207678_102903032 187
9 3300046616 Ga0495668_0075539 Ga0495668_0075539_814_1434 187
10 3300046660 Ga0495625_0006646 Ga0495625_0006646_9237_9857 187
11 3300050492 nmdc:mga0yw44_240430_c1 nmdc:mga0yw44_240430_c1_429_1049 188
12 iso_pu_bacteria 2842333319 2842337130 195
13 3300005335 Ga0070666_10010848 Ga0070666_100108486 197
14 3300005842 Ga0068858_100276249 Ga0068858_1002762492 197
15 3300009093 Ga0105240_10000842 Ga0105240_1000084223 197
16 3300009093 Ga0105240_10222127 Ga0105240_102221272 197
17 3300025913 Ga0207695_10031109 Ga0207695_100311096 197
18 3300026035 Ga0207703_10576568 Ga0207703_105765682 197
19 3300005455 Ga0070663_100110535 Ga0070663_1001105352 199
20 3300015265 Ga0182005_1047383 Ga0182005_10473832 199
21 3300031548 Ga0307408_100472089 Ga0307408_1004720892 199
22 iso_pu_bacteria 2508501122 2509111585 199
23 iso_pu_bacteria 2509276019 2509380539 199
24 iso_pu_bacteria 2511231052 2511499734 199
25 iso_pu_bacteria 2513237086 2513587477 199
26 iso_pu_bacteria 2551306085 2551690121 199
27 iso_pu_bacteria 2551306089 2551710253 199
28 iso_pu_bacteria 2551306090 2551722032 199
29 iso_pu_bacteria 2551306092 2551738032 199
30 iso_pu_bacteria 2558860100 2558862679 199
31 iso_pu_bacteria 2850079185 2850083266 199
32 iso_pu_bacteria 2855839649 2855845425 199
33 iso_pu_bacteria 2889790730 2889794368 199
34 iso_pu_bacteria 2889914905 2889918075 199
35 iso_pu_bacteria 2913295892 2913297313 199
36 iso_pu_bacteria 2915986958 2915990622 199
37 iso_pu_bacteria 2915993759 2915995459 199
38 iso_pu_bacteria 2916035215 2916039626 199
39 iso_pu_bacteria 2916068649 2916074049 199
40 iso_pu_bacteria 2921201388 2921201511 199
41 iso_pu_bacteria 2921208531 2921211919 199
42 iso_pu_bacteria 2921289301 2921289884 199
43 iso_pu_bacteria 2921296804 2921298510 199
44 iso_pu_bacteria 2924150972 2924158100 199
45 iso_pu_bacteria 2924158325 2924161051 199
46 iso_pu_bacteria 2924165586 2924166905 199
47 iso_pu_bacteria 2924186466 2924188614 199
48 iso_pu_bacteria 2924193448 2924197108 199
49 iso_pu_bacteria 2924214083 2924218967 199
50 iso_pu_bacteria 2924221636 2924222178 199
51 iso_pu_bacteria 2924228884 2924231560 199
52 iso_pu_bacteria 2936996657 2937000503 199
53 iso_pu_bacteria 2937049772 2937055786 199
54 iso_pu_bacteria 2937056579 2937062912 199
55 iso_pu_bacteria 2937063883 2937067285 199
56 iso_pu_bacteria 2937091812 2937094237 199
57 iso_pu_bacteria 2937098957 2937100602 199
58 iso_pu_bacteria 2937106411 2937109253 199
59 iso_pu_bacteria 2937113482 2937119826 199
60 iso_pu_bacteria 2957388812 2957391574 199
61 iso_pu_bacteria 2957415311 2957418778 199
62 iso_pu_bacteria 2957422303 2957422519 199
63 iso_pu_bacteria 2957430029 2957436609 199
64 iso_pu_bacteria 2957443900 2957444627 199
65 iso_pu_bacteria 2957457609 2957461370 199
66 iso_pu_bacteria 2957484790 2957488543 199
67 iso_pu_bacteria 2957505466 2957512537 199
68 iso_pu_bacteria 2960617483 2960618460 199
69 iso_pu_bacteria 2960637947 2960640994 199
70 iso_pu_bacteria 2960645483 2960650893 199
71 iso_pu_bacteria 2960652885 2960654931 199
72 iso_pu_bacteria 2960660292 2960661344 199
73 iso_pu_bacteria 2960674078 2960676742 199
74 iso_pu_bacteria 2964607997 2964613221 199
75 iso_pu_bacteria 2964628898 2964630710 199
76 iso_pu_bacteria 2964643177 2964644301 199
77 iso_pu_bacteria 2964656573 2964658293 199
78 iso_pu_bacteria 2964698721 2964700607 199
79 iso_pu_bacteria 2967664464 2967671563 199
80 iso_pu_bacteria 2967671571 2967676894 199
81 iso_pu_bacteria 2967678726 2967680224 199
82 iso_pu_bacteria 2967706974 2967707575 199
83 iso_pu_bacteria 2967714385 2967719258 199
84 iso_pu_bacteria 2967721400 2967724028 199
85 iso_pu_bacteria 2967735183 2967739665 199
86 iso_pu_bacteria 2970019648 2970022074 199
87 iso_pu_bacteria 2970033650 2970035363 199
88 iso_pu_bacteria 2970040964 2970043676 199
89 iso_pu_bacteria 2970047711 2970049116 199
90 iso_pu_bacteria 2970054988 2970057512 199
91 iso_pu_bacteria 2970061556 2970063275 199
92 iso_pu_bacteria 2970068827 2970070216 199
93 iso_pu_bacteria 2970088815 2970089867 199
94 iso_pu_bacteria 2970116247 2970119228 199
95 iso_pu_bacteria 2970136068 2970140367 199
96 iso_pu_bacteria 2970149975 2970151423 199
97 iso_pu_bacteria 2970156795 2970158781 199
98 iso_pu_bacteria 2970184632 2970186604 199
99 iso_pu_bacteria 2970191845 2970194549 199
100 iso_pu_bacteria 2977516862 2977521994 199
101 iso_pu_bacteria 2977523885 2977527632 199
102 iso_pu_bacteria 2977537788 2977542928 199
103 iso_pu_bacteria 2977551784 2977554246 199
104 iso_pu_bacteria 2977565890 2977572710 199
105 iso_pu_bacteria 2977572785 2977576167 199
106 iso_pu_bacteria 2977579622 2977582078 199
107 iso_pu_bacteria 2989776772 2989781433 199
108 iso_pu_bacteria 8005246636 8005250089 199
109 3300028800 Ga0265338_10023697 Ga0265338_100236973 200
110 3300031251 Ga0265327_10000772 Ga0265327_1000077221 200
111 iso_pu_bacteria 2643221623 2644132294 200
112 iso_pu_bacteria 2828305725 2828308813 200
113 iso_pu_bacteria 2906626472 2906634977 200
114 iso_pu_bacteria 2937843397 2937844008 200
115 iso_pu_bacteria 2996310559 2996315955 200
116 3300005548 Ga0070665_100000119 Ga0070665_10000011979 201
117 3300009093 Ga0105240_10082491 Ga0105240_100824912 201
118 3300025913 Ga0207695_10131135 Ga0207695_101311352 201
119 3300028379 Ga0268266_10000003 Ga0268266_1000000380 201
120 3300048918 Ga0496115_0003992 Ga0496115_0003992_1844_2452 201
121 3300053119 Ga0500595_029024 Ga0500595_029024_171_779 201
122 iso_pu_bacteria 2510461069 2510838968 201
123 iso_pu_bacteria 2510917026 2511174839 201
124 iso_pu_bacteria 2512875024 2512963897 201
125 iso_pu_bacteria 2513237159 2514002014 201
126 iso_pu_bacteria 2513237351 2514592020 201
127 iso_pu_bacteria 2582581283 2585169302 201
128 iso_pu_bacteria 2582581306 2585268460 201
129 iso_pu_bacteria 2582581865 2585390554 201
130 iso_pu_bacteria 2582581866 2585394323 201
131 iso_pu_bacteria 2585427633 2585996252 201
132 iso_pu_bacteria 2585427634 2586000863 201
133 iso_pu_bacteria 2600254933 2600374320 201
134 iso_pu_bacteria 2600255279 2601612738 201
135 iso_pu_bacteria 2600255308 2601749406 201
136 iso_pu_bacteria 2643221550 2643772660 201
137 iso_pu_bacteria 2643221610 2644067868 201
138 iso_pu_bacteria 2643221675 2644417848 201
139 iso_pu_bacteria 2643221680 2644451276 201
140 iso_pu_bacteria 2643221726 2644687334 201
141 iso_pu_bacteria 2765235802 2765469431 201
142 iso_pu_bacteria 2818991461 2819684960 201
143 iso_pu_bacteria 2842521101 2842527417 201
144 iso_pu_bacteria 2854896431 2854899638 201
145 iso_pu_bacteria 2854916844 2854918461 201
146 iso_pu_bacteria 2919171160 2919174661 201
147 iso_pu_bacteria 2926754445 2926759449 201
148 iso_pu_bacteria 2928521798 2928525676 201
149 iso_pu_bacteria 2979100975 2979103268 201
150 iso_pu_bacteria 2989349275 2989351359 201
151 iso_pu_bacteria 8045864390 8045866600 201
152 3300005983 Ga0081540_1076978 Ga0081540_10769782 202
153 3300049581 Ga0501047_0048088 Ga0501047_0048088_15_626 202
154 3300021320 Ga0214544_1000017 Ga0214544_100001756 203
155 3300021321 Ga0214542_1000006 Ga0214542_1000006174 203
156 3300021327 Ga0214543_1000014 Ga0214543_1000014149 203
157 3300049580 Ga0501046_0259995 Ga0501046_0259995_593_1258 203
158 3300010375 Ga0105239_10390063 Ga0105239_103900632 204
159 3300049570 Ga0501033_0191293 Ga0501033_0191293_455_1078 204
160 3300049570 Ga0501033_0275990 Ga0501033_0275990_18_632 204
161 3300049572 Ga0501036_0744350 Ga0501036_0744350_149_772 204
162 3300049588 Ga0501072_0101591 Ga0501072_0101591_1427_2050 204
163 3300049591 Ga0501075_0092653 Ga0501075_0092653_218_841 204
164 3300049592 Ga0501076_0071089 Ga0501076_0071089_1542_2165 204
165 3300049679 Ga0501249_000249 Ga0501249_000249_9101_9724 204
166 3300049741 Ga0501079_0010630 Ga0501079_0010630_1166_1789 204
167 3300049742 Ga0501080_0064174 Ga0501080_0064174_2197_2829 204
168 3300049742 Ga0501080_0348388 Ga0501080_0348388_339_959 204
169 3300049742 Ga0501080_0675613 Ga0501080_0675613_236_865 204
170 3300049743 Ga0501081_0010983 Ga0501081_0010983_1653_2276 204
171 3300049822 Ga0501035_0001099 Ga0501035_0001099_4575_5189 204
172 3300049823 Ga0501044_0033694 Ga0501044_0033694_595_1215 204
173 3300049823 Ga0501044_0098833 Ga0501044_0098833_1077_1700 204
174 3300053138 Ga0500564_185335 Ga0500564_185335_23_637 204
175 3300054114 Ga0501084_0007831 Ga0501084_0007831_2873_3496 204
176 3300060353 Ga0501082_0094600 Ga0501082_0094600_1768_2391 204
177 3300060353 Ga0501082_0536848 Ga0501082_0536848_40_654 204
178 3300061734 Ga0530510_0153333 Ga0530510_0153333_654_1277 204
179 3300002739 JGI25158J39367_1002508 JGI25158J39367_10025083 205
180 3300002987 JGI25159J45721_1000240 JGI25159J45721_10002405 205
181 3300003215 JGI25153J46596_10050992 JGI25153J46596_100509922 205
182 3300003320 rootH2_10089532 rootH2_100895322 205
183 3300003354 JGI25160J50197_1000443 JGI25160J50197_10004435 205
184 3300003374 JGI25161J50226_1000376 JGI25161J50226_100037619 205
185 3300003792 Ga0055540_1006255 Ga0055540_10062555 205
186 3300003794 Ga0055531_10001661 Ga0055531_100016617 205
187 3300003794 Ga0055531_10022487 Ga0055531_100224873 205
188 3300003856 Ga0058692_1004995 Ga0058692_10049956 205
189 3300004625 Ga0055543_1000435 Ga0055543_10004355 205
190 3300005262 Ga0065165_1001429 Ga0065165_100142921 205
191 3300005329 Ga0070683_100631940 Ga0070683_1006319401 205
192 3300005336 Ga0070680_100100814 Ga0070680_1001008142 205
193 3300005353 Ga0070669_100402431 Ga0070669_1004024311 205
194 3300005366 Ga0070659_100069387 Ga0070659_1000693873 205
195 3300005436 Ga0070713_100095082 Ga0070713_1000950823 205
196 3300005458 Ga0070681_10147301 Ga0070681_101473012 205
197 3300005530 Ga0070679_100069722 Ga0070679_1000697223 205
198 3300005530 Ga0070679_100080596 Ga0070679_1000805965 205
199 3300005548 Ga0070665_100037104 Ga0070665_1000371045 205
200 3300005563 Ga0068855_100842771 Ga0068855_1008427712 205
201 3300005617 Ga0068859_100114786 Ga0068859_1001147862 205
202 3300006038 Ga0075365_10002021 Ga0075365_100020216 205
203 3300006177 Ga0075362_10124771 Ga0075362_101247712 205
204 3300006178 Ga0075367_10016902 Ga0075367_100169025 205
205 3300006237 Ga0097621_100279203 Ga0097621_1002792032 205
206 3300006931 Ga0097620_100114784 Ga0097620_1001147842 205
207 3300006948 Ga0099826_10000220 Ga0099826_100002209 205
208 3300009176 Ga0105242_10607181 Ga0105242_106071811 205
209 3300013105 Ga0157369_10002099 Ga0157369_1000209920 205
210 3300013296 Ga0157374_10921109 Ga0157374_109211091 205
211 3300013307 Ga0157372_10591700 Ga0157372_105917002 205
212 3300014497 Ga0182008_10040125 Ga0182008_100401252 205
213 3300020082 Ga0206353_10594942 Ga0206353_105949422 205
214 3300022467 Ga0224712_10024011 Ga0224712_100240113 205
215 3300025208 Ga0209436_101079 Ga0209436_1010795 205
216 3300025284 Ga0209130_1000553 Ga0209130_100055332 205
217 3300025292 Ga0209676_1007916 Ga0209676_10079164 205
218 3300025297 Ga0209758_1000688 Ga0209758_100068818 205
219 3300025297 Ga0209758_1015707 Ga0209758_10157074 205
220 3300025298 Ga0209050_1012807 Ga0209050_10128071 205
221 3300025302 Ga0207426_1001053 Ga0207426_100105322 205
222 3300025303 Ga0209051_1001404 Ga0209051_10014049 205
223 3300025304 Ga0209257_1004666 Ga0209257_10046665 205
224 3300025304 Ga0209257_1005699 Ga0209257_10056997 205
225 3300025912 Ga0207707_10049960 Ga0207707_100499602 205
226 3300025914 Ga0207671_10472389 Ga0207671_104723892 205
227 3300025915 Ga0207693_10261286 Ga0207693_102612862 205
228 3300025917 Ga0207660_10026667 Ga0207660_100266672 205
229 3300025917 Ga0207660_10085340 Ga0207660_100853402 205
230 3300025921 Ga0207652_10029122 Ga0207652_100291224 205
231 3300025921 Ga0207652_10210082 Ga0207652_102100821 205
232 3300025923 Ga0207681_10417560 Ga0207681_104175602 205
233 3300025932 Ga0207690_10014665 Ga0207690_100146651 205
234 3300025949 Ga0207667_10771108 Ga0207667_107711082 205
235 3300027312 Ga0209371_1001957 Ga0209371_10019576 205
236 3300027666 Ga0209282_1000312 Ga0209282_100031221 205
237 3300028379 Ga0268266_10104470 Ga0268266_101044702 205
238 3300028794 Ga0307515_10000307 Ga0307515_1000030773 205
239 3300028794 Ga0307515_10001253 Ga0307515_1000125335 205
240 3300030500 Ga0268256_1004214 Ga0268256_10042146 205
241 3300035086 Ga0373934_0193299 Ga0373934_0193299_126_749 205
242 3300035695 Ga0373927_0018141 Ga0373927_0018141_154_774 205
243 3300036401 Ga0373937_0015136 Ga0373937_0015136_1032_1655 205
244 3300037068 Ga0373925_0559116 Ga0373925_0559116_186_806 205
245 3300037312 Ga0395899_0139525 Ga0395899_0139525_262_879 205
246 3300037418 Ga0395900_0009835 Ga0395900_0009835_3769_4386 205
247 3300037466 Ga0395898_0662760 Ga0395898_0662760_348_965 205
248 3300038443 Ga0395901_0007380 Ga0395901_0007380_3733_4350 205
249 3300038443 Ga0395901_0672882 Ga0395901_0672882_375_1001 205
250 3300046519 Ga0495632_0118866 Ga0495632_0118866_354_974 205
251 3300047472 Ga0495686_0032786 Ga0495686_0032786_1935_2582 205
252 3300048920 Ga0496117_0000277 Ga0496117_0000277_43013_43651 205
253 3300048921 Ga0496118_0001237 Ga0496118_0001237_19345_19983 205
254 3300048923 Ga0496120_0001451 Ga0496120_0001451_3903_4541 205
255 3300048925 Ga0496122_0000505 Ga0496122_0000505_37231_37857 205
256 3300048926 Ga0496123_0000400 Ga0496123_0000400_42715_43341 205
257 3300048927 Ga0496124_0229767 Ga0496124_0229767_734_1354 205
258 3300048929 Ga0496126_0000574 Ga0496126_0000574_44971_45609 205
259 3300048929 Ga0496126_0312288 Ga0496126_0312288_314_934 205
260 3300049568 Ga0501031_0000010 Ga0501031_0000010_105847_106473 205
261 3300049568 Ga0501031_0019564 Ga0501031_0019564_3639_4265 205
262 3300049568 Ga0501031_0050197 Ga0501031_0050197_1149_1775 205
263 3300049568 Ga0501031_0143722 Ga0501031_0143722_857_1474 205
264 3300049568 Ga0501031_0180471 Ga0501031_0180471_587_1213 205
265 3300049569 Ga0501032_0000023 Ga0501032_0000023_39963_40589 205
266 3300049569 Ga0501032_0003527 Ga0501032_0003527_8253_8879 205
267 3300049569 Ga0501032_0043679 Ga0501032_0043679_1060_1686 205
268 3300049569 Ga0501032_0169437 Ga0501032_0169437_281_907 205
269 3300049570 Ga0501033_0000104 Ga0501033_0000104_60917_61543 205
270 3300049570 Ga0501033_0000481 Ga0501033_0000481_6862_7488 205
271 3300049570 Ga0501033_0005738 Ga0501033_0005738_3909_4526 205
272 3300049570 Ga0501033_0156388 Ga0501033_0156388_16_633 205
273 3300049570 Ga0501033_0196630 Ga0501033_0196630_93_710 205
274 3300049570 Ga0501033_0317595 Ga0501033_0317595_86_703 205
275 3300049571 Ga0501034_0000116 Ga0501034_0000116_105854_106480 205
276 3300049571 Ga0501034_0001737 Ga0501034_0001737_20391_21017 205
277 3300049571 Ga0501034_0098946 Ga0501034_0098946_2273_2899 205
278 3300049571 Ga0501034_0186244 Ga0501034_0186244_995_1612 205
279 3300049571 Ga0501034_0690651 Ga0501034_0690651_260_877 205
280 3300049572 Ga0501036_0000015 Ga0501036_0000015_105854_106480 205
281 3300049572 Ga0501036_0005744 Ga0501036_0005744_9138_9764 205
282 3300049572 Ga0501036_0046654 Ga0501036_0046654_2338_2955 205
283 3300049572 Ga0501036_0067788 Ga0501036_0067788_146_772 205
284 3300049572 Ga0501036_0118398 Ga0501036_0118398_234_860 205
285 3300049572 Ga0501036_0238501 Ga0501036_0238501_594_1220 205
286 3300049572 Ga0501036_0397111 Ga0501036_0397111_342_977 205
287 3300049573 Ga0501037_0000023 Ga0501037_0000023_105954_106580 205
288 3300049573 Ga0501037_0036842 Ga0501037_0036842_324_941 205
289 3300049573 Ga0501037_0103215 Ga0501037_0103215_530_1156 205
290 3300049573 Ga0501037_0201745 Ga0501037_0201745_681_1307 205
291 3300049574 Ga0501038_0000025 Ga0501038_0000025_105954_106580 205
292 3300049574 Ga0501038_0158424 Ga0501038_0158424_1089_1715 205
293 3300049574 Ga0501038_0221385 Ga0501038_0221385_510_1136 205
294 3300049574 Ga0501038_0565429 Ga0501038_0565429_22_648 205
295 3300049575 Ga0501039_0000037 Ga0501039_0000037_105854_106480 205
296 3300049575 Ga0501039_0082180 Ga0501039_0082180_1156_1773 205
297 3300049575 Ga0501039_0387000 Ga0501039_0387000_119_745 205
298 3300049576 Ga0501040_0004031 Ga0501040_0004031_5220_5846 205
299 3300049579 Ga0501043_0000070 Ga0501043_0000070_49290_49916 205
300 3300049579 Ga0501043_0001898 Ga0501043_0001898_6576_7202 205
301 3300049579 Ga0501043_0042114 Ga0501043_0042114_1731_2357 205
302 3300049579 Ga0501043_0078400 Ga0501043_0078400_917_1534 205
303 3300049579 Ga0501043_0093348 Ga0501043_0093348_388_1005 205
304 3300049579 Ga0501043_0127260 Ga0501043_0127260_316_942 205
305 3300049579 Ga0501043_0614895 Ga0501043_0614895_138_755 205
306 3300049580 Ga0501046_0162716 Ga0501046_0162716_25_651 205
307 3300049581 Ga0501047_0005196 Ga0501047_0005196_1074_1700 205
308 3300049581 Ga0501047_0006480 Ga0501047_0006480_6913_7539 205
309 3300049581 Ga0501047_0008856 Ga0501047_0008856_296_922 205
310 3300049581 Ga0501047_0051388 Ga0501047_0051388_1790_2416 205
311 3300049581 Ga0501047_0072739 Ga0501047_0072739_332_967 205
312 3300049581 Ga0501047_0504921 Ga0501047_0504921_322_939 205
313 3300049582 Ga0501048_0099225 Ga0501048_0099225_445_1071 205
314 3300049585 Ga0501069_0335414 Ga0501069_0335414_173_799 205
315 3300049586 Ga0501070_0011774 Ga0501070_0011774_3978_4604 205
316 3300049586 Ga0501070_0080508 Ga0501070_0080508_397_1023 205
317 3300049586 Ga0501070_0128214 Ga0501070_0128214_477_1103 205
318 3300049586 Ga0501070_0166495 Ga0501070_0166495_988_1614 205
319 3300049586 Ga0501070_0339457 Ga0501070_0339457_192_809 205
320 3300049589 Ga0501073_0264318 Ga0501073_0264318_306_932 205
321 3300049590 Ga0501074_0021769 Ga0501074_0021769_3847_4473 205
322 3300049590 Ga0501074_0613571 Ga0501074_0613571_62_688 205
323 3300049671 Ga0501238_004598 Ga0501238_004598_263_883 205
324 3300049671 Ga0501238_013868 Ga0501238_013868_334_972 205
325 3300049741 Ga0501079_0886506 Ga0501079_0886506_31_657 205
326 3300049742 Ga0501080_0042257 Ga0501080_0042257_3290_3916 205
327 3300049742 Ga0501080_0138994 Ga0501080_0138994_42_668 205
328 3300049742 Ga0501080_0381369 Ga0501080_0381369_356_982 205
329 3300049744 Ga0501083_0060550 Ga0501083_0060550_249_875 205
330 3300049822 Ga0501035_0000074 Ga0501035_0000074_105835_106461 205
331 3300049822 Ga0501035_0003095 Ga0501035_0003095_10950_11576 205
332 3300049822 Ga0501035_0004312 Ga0501035_0004312_8274_8900 205
333 3300049822 Ga0501035_0025801 Ga0501035_0025801_2315_2932 205
334 3300049822 Ga0501035_0079139 Ga0501035_0079139_1238_1864 205
335 3300049822 Ga0501035_0176731 Ga0501035_0176731_942_1568 205
336 3300049822 Ga0501035_0557882 Ga0501035_0557882_300_926 205
337 3300049823 Ga0501044_0000069 Ga0501044_0000069_19495_20121 205
338 3300049823 Ga0501044_0000505 Ga0501044_0000505_6240_6866 205
339 3300049823 Ga0501044_0009510 Ga0501044_0009510_8622_9239 205
340 3300049823 Ga0501044_0029819 Ga0501044_0029819_4844_5470 205
341 3300049823 Ga0501044_0063352 Ga0501044_0063352_1982_2608 205
342 3300049823 Ga0501044_0063554 Ga0501044_0063554_286_903 205
343 3300049823 Ga0501044_0127138 Ga0501044_0127138_27_653 205
344 3300049823 Ga0501044_0132816 Ga0501044_0132816_1107_1733 205
345 3300049823 Ga0501044_0175764 Ga0501044_0175764_496_1113 205
346 3300049823 Ga0501044_0741110 Ga0501044_0741110_70_708 205
347 3300050490 nmdc:mga03n38_169685_c1 nmdc:mga03n38_169685_c1_101_721 205
348 3300050492 nmdc:mga0yw44_546_c1 nmdc:mga0yw44_546_c1_12342_12962 205
349 3300053122 Ga0500608_023027 Ga0500608_023027_721_1365 205
350 3300053125 Ga0500618_003741 Ga0500618_003741_4403_5023 205
351 3300053136 Ga0500559_0014382 Ga0500559_0014382_2308_2928 205
352 3300053136 Ga0500559_0044213 Ga0500559_0044213_1215_1865 205
353 3300053153 Ga0500616_0000102 Ga0500616_0000102_129372_129992 205
354 3300053153 Ga0500616_0022764 Ga0500616_0022764_1901_2521 205
355 3300053156 Ga0500622_0000101 Ga0500622_0000101_47235_47879 205
356 3300053158 Ga0500627_0015828 Ga0500627_0015828_1568_2188 205
357 3300053158 Ga0500627_0056274 Ga0500627_0056274_870_1508 205
358 3300059424 Ga0590075_070337 Ga0590075_070337_196_828 205

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

25

135

0.98

PF00196

GerE

Bacterial regulatory proteins, luxR family

159

215

0.98

PF08281

Sigma70_r4_2

Sigma-70, region 4

153

203

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1d5w-assembly1.cif.gz_A phosphorylated fixj receiver domain 0.976 5 124
1dck-assembly1.cif.gz_A structure of unphosphorylated fixj-n complexed with mn2+ 0.9735 5 122
6ugl-assembly1.cif.gz_A vqma bound to dpo 0.9569 143 205
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9536 140 204
6kju-assembly1.cif.gz_A huge conformation shift of vibrio cholerae vqma dimer in the absence of target dna provides insight into dna-binding mechanisms of luxr-type receptors 0.9531 144 203
ID Description Score Start End Superfamily
1dckB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9811 5 123 3.40.50.2300
1zn2A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9728 144 199 1.10.10.10
1yioA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 144 199 1.10.10.10
4if4B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9474 140 202 1.10.10.10
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9473 6 84 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2S6N0G9-F1-model_v4 DNA-binding response regulator 0.9446 6 202 GO:0000160
GO:0003677
GO:0006355
AF-A0A537QLA2-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9446 6 202 GO:0000155
GO:0003677
GO:0005886
GO:0006355
GO:0009927
AF-A0A7Y8MKC7-F1-model_v4 Response regulator transcription factor 0.9295 6 200 GO:0000160
GO:0006355
AF-R0E8G6-F1-model_v4 Two component transcriptional regulator, LuxR family 0.9283 6 201 GO:0000160
GO:0003677
GO:0006355
AF-B6B3N4-F1-model_v4 DNA-binding response regulator, LuxR family 0.9265 6 197 GO:0000160
GO:0003677
GO:0006355

Feature Viewer

pLDDT pTM Quality
86.89 0.71 High
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Predicted Structure (AlphaFold2)

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