F420984

General Info

Members Datasets Scaffolds Average Seq Length
357 235 714 216

Family's Representative Sequence

Representative Sequence 3300049574|Ga0501038_0290250|Ga0501038_0290250_380_1120
Length 246
Sequence MGAVKTKRMPRAVREQQMLDAAVRIFGRRGYMAASMDEIAELAGVSKPLVYLYLNSKEDLFTACIRREAAALTEAVRGAVGPGLPADRQLWDGLQAFFAHTAEHPDAWSVLHLQARTHGEPFAAEVAAMRAEIVAFVTRLFAAAAREAHRDPDLPEHEVAGLAEALVGAAESLAAWANATPGVSASQAAATLMNFAWSGLGALLSGHRWTPPIRAERPTGAELVSPDRCRRPSVPRSSKRPDPSVP

Samples

Sample ID Description Type Environment
1 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
28 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
29 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
30 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
31 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
39 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
40 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
41 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
42 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
43 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
44 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
45 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
46 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
47 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
48 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
49 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
52 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
55 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
56 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
57 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
58 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
59 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
60 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
61 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
62 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
63 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
64 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
65 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
66 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
67 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
68 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
69 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
70 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
71 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
72 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
73 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
74 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
75 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
76 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
77 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
78 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
79 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
80 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
81 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
89 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
96 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
97 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
98 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
99 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
100 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
101 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
102 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
105 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
106 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
107 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
108 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
118 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
119 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
120 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
123 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
126 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
130 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
135 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
136 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
137 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
138 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
139 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
140 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
141 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
142 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
143 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
149 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
150 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
154 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
155 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
158 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
159 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
160 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
161 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
162 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
163 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
164 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
177 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
180 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
183 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
184 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
185 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
186 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
187 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
188 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
189 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
190 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
191 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
192 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
193 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
194 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
195 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
196 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
197 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
198 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
199 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
200 2643221647 Streptomyces sp. Root369 Isolate Unclassified
201 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
202 2643221714 Streptomyces sp. Root264 Isolate Unclassified
203 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
204 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
205 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
206 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
207 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
208 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
209 2808606448 Streptomyces sp. 193411 Isolate Unclassified
210 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
211 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
212 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
213 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
214 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
215 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
216 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
217 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
218 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
219 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
220 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
221 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
222 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
223 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
224 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
225 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
226 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
227 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
228 649633069 Micromonospora sp. L5 Isolate Unclassified
229 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
230 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
231 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
232 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
233 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
234 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
235 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.39
Metatranscriptomes 0.56
Isolates 12.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.2
Nodule 1.68
Rhizoplane 0.56
Rhizosphere 79.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501038_0290250 3300049574 Bacteria 1286
2 JGI24739J22299_10041522 3300001989 Bacteria 1530
3 JGI24737J22298_10032094 3300001990 Bacteria 1638
4 JGI24738J21930_10015520 3300002075 Bacteria 1618
5 rootH1_10064457 3300003316 Bacteria 2273
6 rootH1_10074438 3300003316 Bacteria 1781
7 rootH2_10027417 3300003320 Bacteria 2112
8 rootL2_10048061 3300003322 Bacteria 11893
9 rootL2_10120525 3300003322 Bacteria 2907
10 rootH1_10020463 3300003323 Bacteria 4989
11 rootH1_10060687 3300003323 Bacteria 6144
12 Ga0006562J51391_1078455 3300003578 Bacteria 11995
13 Ga0006562J51391_1078456 3300003578 Bacteria 8680
14 Ga0070682_100367732 3300005337 Bacteria 1077
15 Ga0070698_100399850 3300005471 Bacteria 1307
16 Ga0068853_100022713 3300005539 Bacteria 5243
17 Ga0070672_100451890 3300005543 Bacteria 1107
18 Ga0068854_100319801 3300005578 Bacteria 1261
19 Ga0068856_100139088 3300005614 Bacteria 2435
20 Ga0075367_10002092 3300006178 Bacteria 8950
21 Ga0075428_100002783 3300006844 Bacteria 19053
22 Ga0075430_100004182 3300006846 Bacteria 12179
23 Ga0075430_100815686 3300006846 Bacteria 769
24 Ga0075431_100033847 3300006847 Bacteria 5265
25 Ga0075429_100004143 3300006880 Bacteria 12407
26 Ga0105244_10085112 3300009036 Bacteria 1561
27 Ga0114129_10000597 3300009147 Bacteria 44562
28 Ga0105238_10139271 3300009551 Bacteria 2404
29 Ga0105239_10340159 3300010375 Bacteria 1693
30 Ga0157369_10051640 3300013105 Bacteria 4449
31 Ga0157375_10813119 3300013308 Bacteria 1083
32 Ga0182008_10002322 3300014497 Bacteria 11986
33 Ga0182007_10001433 3300015262 Bacteria 12787
34 Ga0183367_1002 3300015688 Bacteria 1101531
35 Ga0207426_1020054 3300025302 Bacteria 2329
36 Ga0207647_10022633 3300025904 Bacteria 4171
37 Ga0207639_10016419 3300026041 Bacteria 5238
38 Ga0207702_10072445 3300026078 Bacteria 2969
39 Ga0209282_1233571 3300027666 Bacteria 824
40 Ga0268266_10560732 3300028379 Bacteria 1095
41 Ga0307517_10002570 3300028786 Bacteria 28904
42 Ga0307515_10000258 3300028794 Bacteria 131660
43 Ga0307515_10012105 3300028794 Bacteria 16268
44 Ga0307515_10168391 3300028794 Bacteria 2197
45 Ga0268256_1051274 3300030500 Bacteria 868
46 Ga0307511_10005077 3300030521 Bacteria 13424
47 Ga0307511_10019273 3300030521 Bacteria 6495
48 Ga0307512_10004738 3300030522 Bacteria 14684
49 Ga0307513_10016885 3300031456 Bacteria 8779
50 Ga0307509_10063720 3300031507 Bacteria 3880
51 Ga0307408_100359107 3300031548 Bacteria 1239
52 Ga0307508_10065249 3300031616 Bacteria 3208
53 Ga0307508_10072198 3300031616 Bacteria 3026
54 Ga0307514_10031576 3300031649 Bacteria 4247
55 Ga0307514_10086179 3300031649 Bacteria 2305
56 Ga0307516_10039408 3300031730 Bacteria 4710
57 Ga0307516_10286889 3300031730 Bacteria 1326
58 Ga0307413_10336537 3300031824 Bacteria 1159
59 Ga0307518_10015625 3300031838 Bacteria 5438
60 Ga0307518_10026179 3300031838 Bacteria 4210
61 Ga0307518_10069112 3300031838 Bacteria 2559
62 Ga0307406_10101358 3300031901 Bacteria 1962
63 Ga0307406_10574997 3300031901 Bacteria 925
64 Ga0307415_101512738 3300032126 Bacteria 642
65 Ga0307507_10070746 3300033179 Bacteria 3161
66 Ga0307507_10127673 3300033179 Bacteria 2004
67 Ga0307510_10003725 3300033180 Bacteria 17820
68 Ga0307510_10016240 3300033180 Bacteria 8791
69 Ga0307510_10024112 3300033180 Bacteria 7035
70 Ga0395898_0004505 3300037466 Bacteria 15229
71 Ga0395898_0131696 3300037466 Bacteria 2395
72 Ga0395901_0154662 3300038443 Bacteria 2409
73 Ga0439436_0021474 3300041404 Bacteria 1918
74 Ga0439439_0029134 3300041406 Bacteria 1400
75 Ga0451800_0813174 3300041459 Bacteria 762
76 Ga0451802_0472533 3300041460 Bacteria 1333
77 Ga0451841_0277521 3300041498 Bacteria 1124
78 Ga0451853_0073848 3300041512 Bacteria 3694
79 Ga0439433_0055876 3300041999 Bacteria 935
80 Ga0439448_0024374 3300042005 Bacteria 1891
81 Ga0439449_0000759 3300042007 Bacteria 12397
82 Ga0439449_0008592 3300042007 Bacteria 3877
83 Ga0439449_0056933 3300042007 Bacteria 1443
84 Ga0439449_0056934 3300042007 Bacteria 1443
85 Ga0439450_052309 3300042008 Bacteria 973
86 Ga0439457_002442 3300042014 Bacteria 5315
87 Ga0439457_004574 3300042014 Bacteria 3586
88 Ga0450920_051237 3300042122 Bacteria 828
89 Ga0450896_001384 3300042133 Bacteria 2968
90 Ga0450899_000273 3300042135 Bacteria 5583
91 Ga0450903_001208 3300042138 Bacteria 4851
92 Ga0450906_000253 3300042145 Bacteria 10298
93 Ga0450910_022907 3300042147 Bacteria 952
94 Ga0439458_0000008 3300042157 Bacteria 29768
95 Ga0450901_003578 3300042533 Bacteria 1619
96 Ga0466969_0006396 3300044656 Bacteria 6270
97 Ga0466972_0002335 3300044658 Bacteria 9345
98 Ga0466972_0018563 3300044658 Bacteria 3479
99 Ga0466965_0000250 3300044683 Bacteria 17340
100 Ga0466965_0073115 3300044683 Bacteria 1726
101 Ga0466965_0337376 3300044683 Bacteria 823
102 Ga0466966_0001751 3300044684 Bacteria 14056
103 Ga0466966_0001969 3300044684 Bacteria 13309
104 Ga0466966_0009326 3300044684 Bacteria 6498
105 Ga0466966_0184927 3300044684 Bacteria 1263
106 Ga0466961_0000557 3300044693 Bacteria 23793
107 Ga0466961_0013776 3300044693 Bacteria 5182
108 Ga0466961_0055084 3300044693 Bacteria 2536
109 Ga0466961_0400201 3300044693 Bacteria 833
110 Ga0466963_0000145 3300044694 Bacteria 27958
111 Ga0466963_0291300 3300044694 Bacteria 1147
112 Ga0466964_0000780 3300044706 Bacteria 10361
113 Ga0466971_0000187 3300044719 Bacteria 23602
114 Ga0466971_0016830 3300044719 Bacteria 3230
115 Ga0466971_0031703 3300044719 Bacteria 2367
116 Ga0466971_0037992 3300044719 Bacteria 2160
117 Ga0466970_0001548 3300044765 Bacteria 11072
118 Ga0466970_0013124 3300044765 Bacteria 4246
119 Ga0466970_0024502 3300044765 Bacteria 3155
120 Ga0466957_0000840 3300044842 Bacteria 15708
121 Ga0466957_0039338 3300044842 Bacteria 2853
122 Ga0466960_0052825 3300044901 Bacteria 1967
123 Ga0466959_0000277 3300045049 Bacteria 31271
124 Ga0466959_0009846 3300045049 Bacteria 6811
125 Ga0466958_0000201 3300045836 Bacteria 22048
126 Ga0466967_0028397 3300045976 Bacteria 4670
127 Ga0466967_0110094 3300045976 Bacteria 2529
128 Ga0466967_0123719 3300045976 Bacteria 2393
129 Ga0466967_0659563 3300045976 Bacteria 1035
130 Ga0466967_1147056 3300045976 Bacteria 774
131 Ga0495592_0004877 3300046454 Bacteria 9873
132 Ga0495592_0043064 3300046454 Bacteria 3379
133 Ga0495603_0019637 3300046455 Bacteria 4090
134 Ga0495629_0025288 3300046459 Bacteria 4222
135 Ga0495629_0035321 3300046459 Bacteria 3532
136 Ga0495629_0063076 3300046459 Bacteria 2587
137 Ga0495629_0079999 3300046459 Bacteria 2282
138 Ga0495638_0019243 3300046460 Bacteria 4519
139 Ga0495638_0052608 3300046460 Bacteria 2536
140 Ga0495651_0004772 3300046462 Bacteria 10376
141 Ga0495651_0019255 3300046462 Bacteria 5289
142 Ga0495651_0061622 3300046462 Bacteria 2871
143 Ga0495653_0030697 3300046463 Bacteria 4277
144 Ga0495580_0008806 3300046472 Bacteria 7988
145 Ga0495582_0043524 3300046473 Bacteria 2473
146 Ga0495605_0001205 3300046474 Bacteria 17237
147 Ga0495639_0116539 3300046475 Bacteria 1271
148 Ga0495662_0001764 3300046476 Bacteria 10818
149 Ga0495662_0005645 3300046476 Bacteria 6257
150 Ga0495662_0044345 3300046476 Bacteria 2147
151 Ga0495664_0000650 3300046477 Bacteria 17686
152 Ga0495664_0046505 3300046477 Bacteria 2574
153 Ga0495584_0036741 3300046491 Bacteria 2474
154 Ga0495594_0014143 3300046499 Bacteria 4178
155 Ga0495594_0019302 3300046499 Bacteria 3621
156 Ga0495594_0041990 3300046499 Bacteria 2504
157 Ga0495594_0098525 3300046499 Bacteria 1643
158 Ga0495594_0142602 3300046499 Bacteria 1359
159 Ga0495583_0007993 3300046506 Bacteria 6541
160 Ga0495583_0153048 3300046506 Bacteria 955
161 Ga0495606_0017353 3300046507 Bacteria 5444
162 Ga0495606_0253353 3300046507 Bacteria 975
163 Ga0495608_0041902 3300046511 Bacteria 3062
164 Ga0495610_0015427 3300046512 Bacteria 4440
165 Ga0495616_0055873 3300046513 Bacteria 1952
166 Ga0495618_0044499 3300046514 Bacteria 2800
167 Ga0495620_0034530 3300046515 Bacteria 2283
168 Ga0495628_0028833 3300046516 Bacteria 4508
169 Ga0495628_0040375 3300046516 Bacteria 3728
170 Ga0495630_0171847 3300046517 Bacteria 1651
171 Ga0495630_0248262 3300046517 Bacteria 1359
172 Ga0495631_0027637 3300046518 Bacteria 2594
173 Ga0495637_0061477 3300046520 Bacteria 1540
174 Ga0495643_0015298 3300046522 Bacteria 4537
175 Ga0495644_0093166 3300046523 Bacteria 1138
176 Ga0495648_0019286 3300046524 Bacteria 4801
177 Ga0495666_0009146 3300046526 Bacteria 4955
178 Ga0495642_0176926 3300046528 Bacteria 928
179 Ga0495652_0007352 3300046529 Bacteria 10156
180 Ga0495652_0237291 3300046529 Bacteria 1359
181 Ga0495665_0022859 3300046531 Bacteria 3358
182 Ga0495640_0026342 3300046533 Bacteria 4203
183 Ga0495640_0034361 3300046533 Bacteria 3597
184 Ga0495640_0068274 3300046533 Bacteria 2392
185 Ga0495587_0002356 3300046536 Bacteria 12624
186 Ga0495587_0399794 3300046536 Bacteria 763
187 Ga0495609_0103924 3300046538 Bacteria 1229
188 Ga0495597_0026721 3300046542 Bacteria 2651
189 Ga0495597_0084619 3300046542 Bacteria 1352
190 Ga0495645_0056086 3300046543 Bacteria 2860
191 Ga0495645_0081011 3300046543 Bacteria 2329
192 Ga0495645_0145254 3300046543 Bacteria 1652
193 Ga0495622_0090230 3300046557 Bacteria 1408
194 Ga0495633_0081027 3300046558 Bacteria 1510
195 Ga0495667_0028717 3300046559 Bacteria 3745
196 Ga0495668_0009996 3300046616 Bacteria 5777
197 Ga0495634_0003920 3300046642 Bacteria 11813
198 Ga0495634_0043441 3300046642 Bacteria 3045
199 Ga0495611_0157833 3300046648 Bacteria 1059
200 Ga0495625_0012229 3300046660 Bacteria 6962
201 Ga0495625_0059309 3300046660 Bacteria 2715
202 Ga0495625_0060627 3300046660 Bacteria 2680
203 Ga0495635_0015604 3300046663 Bacteria 5308
204 Ga0495635_0175322 3300046663 Bacteria 1457
205 Ga0495661_0042947 3300046665 Bacteria 2783
206 Ga0495588_0003274 3300046674 Bacteria 7033
207 Ga0495588_0014644 3300046674 Bacteria 3758
208 Ga0495657_0021017 3300046675 Bacteria 4689
209 Ga0495657_0041735 3300046675 Bacteria 3137
210 Ga0495599_0069351 3300046678 Bacteria 2200
211 Ga0495599_0135365 3300046678 Bacteria 1529
212 Ga0495623_0082128 3300046679 Bacteria 1991
213 Ga0495646_0000394 3300046680 Bacteria 22936
214 Ga0495646_0018377 3300046680 Bacteria 4428
215 Ga0495613_0000548 3300046689 Bacteria 31085
216 Ga0495613_0029504 3300046689 Bacteria 4078
217 Ga0495613_0155315 3300046689 Bacteria 1630
218 Ga0495613_0192102 3300046689 Bacteria 1442
219 Ga0495613_0481473 3300046689 Bacteria 838
220 Ga0495613_0496478 3300046689 Bacteria 822
221 Ga0495624_0034475 3300046690 Bacteria 3274
222 Ga0495624_0203474 3300046690 Bacteria 1202
223 Ga0495671_0040800 3300046692 Bacteria 2339
224 Ga0495671_0089311 3300046692 Bacteria 1509
225 Ga0495649_0019074 3300046694 Bacteria 3853
226 Ga0495649_0030718 3300046694 Bacteria 2965
227 Ga0495589_0017202 3300046794 Bacteria 3712
228 Ga0495589_0025096 3300046794 Bacteria 3026
229 Ga0495589_0048869 3300046794 Bacteria 2093
230 Ga0495589_0179915 3300046794 Bacteria 1003
231 Ga0495600_0046591 3300046809 Bacteria 2828
232 Ga0495600_0065170 3300046809 Bacteria 2381
233 Ga0495600_0106214 3300046809 Bacteria 1829
234 Ga0495660_0089186 3300046810 Bacteria 1605
235 Ga0495581_0033652 3300047315 Bacteria 2966
236 Ga0495581_0077804 3300047315 Bacteria 1920
237 Ga0495581_0106530 3300047315 Bacteria 1629
238 Ga0495604_0002183 3300047317 Bacteria 15700
239 Ga0495604_0006696 3300047317 Bacteria 9134
240 Ga0495636_0001000 3300047318 Bacteria 10574
241 Ga0495636_0011301 3300047318 Bacteria 3533
242 Ga0495674_0150126 3300047319 Bacteria 1954
243 Ga0495674_0328019 3300047319 Bacteria 1245
244 Ga0495676_0011481 3300047321 Bacteria 7993
245 Ga0495676_0034810 3300047321 Bacteria 4221
246 Ga0495687_002285 3300047443 Bacteria 15671
247 Ga0495687_061548 3300047443 Bacteria 1543
248 Ga0495687_118175 3300047443 Bacteria 961
249 Ga0495675_0064414 3300047444 Bacteria 2318
250 Ga0495675_0098123 3300047444 Bacteria 1835
251 Ga0495675_0184427 3300047444 Bacteria 1276
252 Ga0495677_0027600 3300047445 Bacteria 2060
253 Ga0495685_004560 3300047447 Bacteria 4486
254 Ga0495685_006350 3300047447 Bacteria 3864
255 Ga0495685_032951 3300047447 Bacteria 1780
256 Ga0495685_051335 3300047447 Bacteria 1398
257 Ga0495681_0002152 3300047470 Bacteria 14284
258 Ga0495681_0008927 3300047470 Bacteria 6228
259 Ga0495684_0043925 3300047471 Bacteria 3421
260 Ga0495684_0052265 3300047471 Bacteria 3118
261 Ga0495686_0005336 3300047472 Bacteria 10179
262 Ga0495593_0002812 3300047673 Bacteria 10484
263 Ga0495593_0006279 3300047673 Bacteria 6974
264 Ga0495593_0088612 3300047673 Bacteria 1595
265 Ga0495602_0028655 3300048088 Bacteria 5324
266 Ga0495602_0041973 3300048088 Bacteria 4171
267 Ga0495602_0069389 3300048088 Bacteria 3021
268 Ga0495614_0005564 3300048089 Bacteria 5680
269 Ga0495614_0007126 3300048089 Bacteria 4986
270 Ga0495614_0014649 3300048089 Bacteria 3428
271 Ga0495614_0058519 3300048089 Bacteria 1655
272 Ga0495626_0001802 3300048091 Bacteria 16182
273 Ga0495678_038685 3300049459 Bacteria 1928
274 Ga0495682_0016669 3300049460 Bacteria 2780
275 Ga0501033_0013456 3300049570 Bacteria 6229
276 Ga0501034_0160241 3300049571 Bacteria 2221
277 Ga0501037_0091745 3300049573 Bacteria 2197
278 Ga0501038_0006300 3300049574 Bacteria 10971
279 Ga0501047_0078556 3300049581 Bacteria 3173
280 Ga0501047_0100502 3300049581 Bacteria 2771
281 Ga0501048_0116229 3300049582 Bacteria 1890
282 Ga0501067_0128870 3300049583 Bacteria 1408
283 Ga0501070_0579352 3300049586 Bacteria 896
284 Ga0501035_0085039 3300049822 Bacteria 2789
285 Ga0501035_0245821 3300049822 Bacteria 1520
286 Ga0501035_0726121 3300049822 Bacteria 799
287 Ga0501044_0037741 3300049823 Bacteria 5049
288 Ga0501044_0048871 3300049823 Bacteria 4367
289 Ga0501044_0094198 3300049823 Bacteria 3020
290 nmdc:mga03n38_33887_c1 3300050490 Bacteria 2176
291 nmdc:mga06z11_9520_c1 3300050494 Bacteria 4098
292 nmdc:mga05p37_86_c1 3300050507 Bacteria 81974
293 nmdc:mga09592_25_c1 3300050508 Bacteria 44492
294 nmdc:mga09592_692874_c1 3300050508 Bacteria 867
295 nmdc:mga0qj67_164_c1 3300050509 Bacteria 44665
296 nmdc:mga0qj67_773579_c1 3300050509 Bacteria 761
297 nmdc:mga06r32_281_c1 3300050510 Bacteria 42391
298 Ga0495601_0126397 3300053077 Bacteria 1663
299 Ga0495612_0027420 3300053078 Bacteria 2290
300 Ga0495619_0026816 3300053085 Bacteria 3709
301 Ga0500644_0033367 3300053088 Bacteria 1652
302 Ga0500640_004541 3300053095 Bacteria 5057
303 Ga0500641_0067160 3300053096 Bacteria 1503
304 Ga0500650_0242178 3300053098 Bacteria 811
305 Ga0500553_065231 3300053101 Bacteria 1692
306 Ga0500560_000486 3300053107 Bacteria 5531
307 Ga0500572_003303 3300053111 Bacteria 3713
308 Ga0500614_007257 3300053123 Bacteria 2336
309 Ga0500652_146852 3300053131 Bacteria 980
310 Ga0500600_0070638 3300053149 Bacteria 1916
311 Ga0500600_0218977 3300053149 Bacteria 880
312 Ga0466962_0000305 3300061719 Bacteria 21073
313 Ga0466962_0007434 3300061719 Bacteria 5258
314 Ga0466962_0041792 3300061719 Bacteria 2193
315 2515497461 2515154088 Bacteria 5526283
316 2515722196 2515154129 Bacteria 5584369
317 2547410132 2547132111 Bacteria 8013147
318 2585308239 2582581313 Bacteria 10042643
319 2585319135 2582581314 Bacteria 11452267
320 2616696919 2616644814 Bacteria 11555299
321 2623585979 2622736626 Bacteria 7181580
322 2644261751 2643221647 Bacteria 10741251
323 2644439179 2643221678 Bacteria 9540101
324 2644633500 2643221714 Bacteria 9015452
325 2676482785 2675903059 Bacteria 8644972
326 2784589558 2784132148 Bacteria 8627943
327 2785342016 2784746763 Bacteria 9783172
328 2785370628 2784746768 Bacteria 10036182
329 2786671808 2786546132 Bacteria 10419719
330 2808843182 2808606359 Bacteria 9866990
331 2809233232 2808606448 Bacteria 8656184
332 2812356907 2811994879 Bacteria 9313447
333 2832005723 2832004796 Bacteria 6538017
334 2852640507 2852635781 Bacteria 8251373
335 2855671833 2855670206 Bacteria 7120389
336 2862286946 2862281513 Bacteria 9621493
337 2862292235 2862290372 Bacteria 7471434
338 2862389182 2862382967 Bacteria 10317375
339 2877679955 2877676314 Bacteria 9512378
340 2929220076 2929219909 Bacteria 6984360
341 2946068959 2946064051 Bacteria 8957905
342 2946076968 2946072368 Bacteria 8999607
343 2947227966 2947224130 Bacteria 9938529
344 2954384918 2954380949 Bacteria 10050426
345 2954678084 2954673503 Bacteria 9685905
346 2954686074 2954682443 Bacteria 9862841
347 2990062169 2990059506 Bacteria 9321252
348 2995465044 2995463766 Bacteria 8577691
349 3006499711 3006493962 Bacteria 8825450
350 649810345 649633069 Bacteria 6962533
351 8003832195 8003830390 Bacteria 6541657
352 8008566400 8008558824 Bacteria 10610750
353 8008577926 8008574985 Bacteria 7815457
354 8048410704 8048406513 Bacteria 8936924
355 8054705573 8054704163 Bacteria 7247792
356 8055416291 8055412473 Bacteria 6257500
357 8056833838 8056829672 Bacteria 9045328
358 Ga0501038_0290250
359 JGI24739J22299_10041522
360 JGI24737J22298_10032094
361 JGI24738J21930_10015520
362 rootH1_10064457
363 rootH1_10074438
364 rootH2_10027417
365 rootL2_10048061
366 rootL2_10120525
367 rootH1_10020463
368 rootH1_10060687
369 Ga0006562J51391_1078455
370 Ga0006562J51391_1078456
371 Ga0070682_100367732
372 Ga0070698_100399850
373 Ga0068853_100022713
374 Ga0070672_100451890
375 Ga0068854_100319801
376 Ga0068856_100139088
377 Ga0075367_10002092
378 Ga0075428_100002783
379 Ga0075430_100004182
380 Ga0075430_100815686
381 Ga0075431_100033847
382 Ga0075429_100004143
383 Ga0105244_10085112
384 Ga0114129_10000597
385 Ga0105238_10139271
386 Ga0105239_10340159
387 Ga0157369_10051640
388 Ga0157375_10813119
389 Ga0182008_10002322
390 Ga0182007_10001433
391 Ga0183367_1002
392 Ga0207426_1020054
393 Ga0207647_10022633
394 Ga0207639_10016419
395 Ga0207702_10072445
396 Ga0209282_1233571
397 Ga0268266_10560732
398 Ga0307517_10002570
399 Ga0307515_10000258
400 Ga0307515_10012105
401 Ga0307515_10168391
402 Ga0268256_1051274
403 Ga0307511_10005077
404 Ga0307511_10019273
405 Ga0307512_10004738
406 Ga0307513_10016885
407 Ga0307509_10063720
408 Ga0307408_100359107
409 Ga0307508_10065249
410 Ga0307508_10072198
411 Ga0307514_10031576
412 Ga0307514_10086179
413 Ga0307516_10039408
414 Ga0307516_10286889
415 Ga0307413_10336537
416 Ga0307518_10015625
417 Ga0307518_10026179
418 Ga0307518_10069112
419 Ga0307406_10101358
420 Ga0307406_10574997
421 Ga0307415_101512738
422 Ga0307507_10070746
423 Ga0307507_10127673
424 Ga0307510_10003725
425 Ga0307510_10016240
426 Ga0307510_10024112
427 Ga0395898_0004505
428 Ga0395898_0131696
429 Ga0395901_0154662
430 Ga0439436_0021474
431 Ga0439439_0029134
432 Ga0451800_0813174
433 Ga0451802_0472533
434 Ga0451841_0277521
435 Ga0451853_0073848
436 Ga0439433_0055876
437 Ga0439448_0024374
438 Ga0439449_0000759
439 Ga0439449_0008592
440 Ga0439449_0056933
441 Ga0439449_0056934
442 Ga0439450_052309
443 Ga0439457_002442
444 Ga0439457_004574
445 Ga0450920_051237
446 Ga0450896_001384
447 Ga0450899_000273
448 Ga0450903_001208
449 Ga0450906_000253
450 Ga0450910_022907
451 Ga0439458_0000008
452 Ga0450901_003578
453 Ga0466969_0006396
454 Ga0466972_0002335
455 Ga0466972_0018563
456 Ga0466965_0000250
457 Ga0466965_0073115
458 Ga0466965_0337376
459 Ga0466966_0001751
460 Ga0466966_0001969
461 Ga0466966_0009326
462 Ga0466966_0184927
463 Ga0466961_0000557
464 Ga0466961_0013776
465 Ga0466961_0055084
466 Ga0466961_0400201
467 Ga0466963_0000145
468 Ga0466963_0291300
469 Ga0466964_0000780
470 Ga0466971_0000187
471 Ga0466971_0016830
472 Ga0466971_0031703
473 Ga0466971_0037992
474 Ga0466970_0001548
475 Ga0466970_0013124
476 Ga0466970_0024502
477 Ga0466957_0000840
478 Ga0466957_0039338
479 Ga0466960_0052825
480 Ga0466959_0000277
481 Ga0466959_0009846
482 Ga0466958_0000201
483 Ga0466967_0028397
484 Ga0466967_0110094
485 Ga0466967_0123719
486 Ga0466967_0659563
487 Ga0466967_1147056
488 Ga0495592_0004877
489 Ga0495592_0043064
490 Ga0495603_0019637
491 Ga0495629_0025288
492 Ga0495629_0035321
493 Ga0495629_0063076
494 Ga0495629_0079999
495 Ga0495638_0019243
496 Ga0495638_0052608
497 Ga0495651_0004772
498 Ga0495651_0019255
499 Ga0495651_0061622
500 Ga0495653_0030697
501 Ga0495580_0008806
502 Ga0495582_0043524
503 Ga0495605_0001205
504 Ga0495639_0116539
505 Ga0495662_0001764
506 Ga0495662_0005645
507 Ga0495662_0044345
508 Ga0495664_0000650
509 Ga0495664_0046505
510 Ga0495584_0036741
511 Ga0495594_0014143
512 Ga0495594_0019302
513 Ga0495594_0041990
514 Ga0495594_0098525
515 Ga0495594_0142602
516 Ga0495583_0007993
517 Ga0495583_0153048
518 Ga0495606_0017353
519 Ga0495606_0253353
520 Ga0495608_0041902
521 Ga0495610_0015427
522 Ga0495616_0055873
523 Ga0495618_0044499
524 Ga0495620_0034530
525 Ga0495628_0028833
526 Ga0495628_0040375
527 Ga0495630_0171847
528 Ga0495630_0248262
529 Ga0495631_0027637
530 Ga0495637_0061477
531 Ga0495643_0015298
532 Ga0495644_0093166
533 Ga0495648_0019286
534 Ga0495666_0009146
535 Ga0495642_0176926
536 Ga0495652_0007352
537 Ga0495652_0237291
538 Ga0495665_0022859
539 Ga0495640_0026342
540 Ga0495640_0034361
541 Ga0495640_0068274
542 Ga0495587_0002356
543 Ga0495587_0399794
544 Ga0495609_0103924
545 Ga0495597_0026721
546 Ga0495597_0084619
547 Ga0495645_0056086
548 Ga0495645_0081011
549 Ga0495645_0145254
550 Ga0495622_0090230
551 Ga0495633_0081027
552 Ga0495667_0028717
553 Ga0495668_0009996
554 Ga0495634_0003920
555 Ga0495634_0043441
556 Ga0495611_0157833
557 Ga0495625_0012229
558 Ga0495625_0059309
559 Ga0495625_0060627
560 Ga0495635_0015604
561 Ga0495635_0175322
562 Ga0495661_0042947
563 Ga0495588_0003274
564 Ga0495588_0014644
565 Ga0495657_0021017
566 Ga0495657_0041735
567 Ga0495599_0069351
568 Ga0495599_0135365
569 Ga0495623_0082128
570 Ga0495646_0000394
571 Ga0495646_0018377
572 Ga0495613_0000548
573 Ga0495613_0029504
574 Ga0495613_0155315
575 Ga0495613_0192102
576 Ga0495613_0481473
577 Ga0495613_0496478
578 Ga0495624_0034475
579 Ga0495624_0203474
580 Ga0495671_0040800
581 Ga0495671_0089311
582 Ga0495649_0019074
583 Ga0495649_0030718
584 Ga0495589_0017202
585 Ga0495589_0025096
586 Ga0495589_0048869
587 Ga0495589_0179915
588 Ga0495600_0046591
589 Ga0495600_0065170
590 Ga0495600_0106214
591 Ga0495660_0089186
592 Ga0495581_0033652
593 Ga0495581_0077804
594 Ga0495581_0106530
595 Ga0495604_0002183
596 Ga0495604_0006696
597 Ga0495636_0001000
598 Ga0495636_0011301
599 Ga0495674_0150126
600 Ga0495674_0328019
601 Ga0495676_0011481
602 Ga0495676_0034810
603 Ga0495687_002285
604 Ga0495687_061548
605 Ga0495687_118175
606 Ga0495675_0064414
607 Ga0495675_0098123
608 Ga0495675_0184427
609 Ga0495677_0027600
610 Ga0495685_004560
611 Ga0495685_006350
612 Ga0495685_032951
613 Ga0495685_051335
614 Ga0495681_0002152
615 Ga0495681_0008927
616 Ga0495684_0043925
617 Ga0495684_0052265
618 Ga0495686_0005336
619 Ga0495593_0002812
620 Ga0495593_0006279
621 Ga0495593_0088612
622 Ga0495602_0028655
623 Ga0495602_0041973
624 Ga0495602_0069389
625 Ga0495614_0005564
626 Ga0495614_0007126
627 Ga0495614_0014649
628 Ga0495614_0058519
629 Ga0495626_0001802
630 Ga0495678_038685
631 Ga0495682_0016669
632 Ga0501033_0013456
633 Ga0501034_0160241
634 Ga0501037_0091745
635 Ga0501038_0006300
636 Ga0501047_0078556
637 Ga0501047_0100502
638 Ga0501048_0116229
639 Ga0501067_0128870
640 Ga0501070_0579352
641 Ga0501035_0085039
642 Ga0501035_0245821
643 Ga0501035_0726121
644 Ga0501044_0037741
645 Ga0501044_0048871
646 Ga0501044_0094198
647 nmdc:mga03n38_33887_c1
648 nmdc:mga06z11_9520_c1
649 nmdc:mga05p37_86_c1
650 nmdc:mga09592_25_c1
651 nmdc:mga09592_692874_c1
652 nmdc:mga0qj67_164_c1
653 nmdc:mga0qj67_773579_c1
654 nmdc:mga06r32_281_c1
655 Ga0495601_0126397
656 Ga0495612_0027420
657 Ga0495619_0026816
658 Ga0500644_0033367
659 Ga0500640_004541
660 Ga0500641_0067160
661 Ga0500650_0242178
662 Ga0500553_065231
663 Ga0500560_000486
664 Ga0500572_003303
665 Ga0500614_007257
666 Ga0500652_146852
667 Ga0500600_0070638
668 Ga0500600_0218977
669 Ga0466962_0000305
670 Ga0466962_0007434
671 Ga0466962_0041792
672 2515497461
673 2515722196
674 2547410132
675 2585308239
676 2585319135
677 2616696919
678 2623585979
679 2644261751
680 2644439179
681 2644633500
682 2676482785
683 2784589558
684 2785342016
685 2785370628
686 2786671808
687 2808843182
688 2809233232
689 2812356907
690 2832005723
691 2852640507
692 2855671833
693 2862286946
694 2862292235
695 2862389182
696 2877679955
697 2929220076
698 2946068959
699 2946076968
700 2947227966
701 2954384918
702 2954678084
703 2954686074
704 2990062169
705 2995465044
706 3006499711
707 649810345
708 8003832195
709 8008566400
710 8008577926
711 8048410704
712 8054705573
713 8055416291
714 8056833838

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

18

64

0.97

PF21943

TetR_C_46

Tetracyclin repressor-like, C-terminal domain

86

199

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f1b-assembly1.cif.gz_A-2 the crystal structure of a tetr-like transcriptional regulator from rhodococcus sp. rha1. 0.9133 8 200
3f1b-assembly1.cif.gz_A-2 the crystal structure of a tetr-like transcriptional regulator from rhodococcus sp. rha1. 0.8992 8 200
6o6o-assembly1.cif.gz_B structure of the regulator fasr from mycobacterium tuberculosis 0.8757 16 200
6o6o-assembly1.cif.gz_B structure of the regulator fasr from mycobacterium tuberculosis 0.8449 16 200
5gpa-assembly1.cif.gz_A structural analysis of fatty acid degradation regulator fadr from bacillus halodurans 0.8314 9 199
ID Description Score Start End Superfamily
2wv1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9976 10 56 1.10.10.60
4x1eB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9935 17 63 1.10.10.60
1pb6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9909 12 63 1.10.10.60
2jk3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9892 10 56 1.10.10.60
4xk4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9885 13 63 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A6G3XBP4-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9812 1 110 GO:0000976
GO:0003700
AF-A0A7X0HC12-F1-model_v4 AcrR family transcriptional regulator 0.9801 9 140 GO:0000976
GO:0003700
AF-A0A6G3XBP4-F1-model_v4 TetR/AcrR family transcriptional regulator 0.964 1 110 GO:0000976
GO:0003700
AF-A0A6I5NEC0-F1-model_v4 deleted 0.9626 1 190
AF-A0A1C4KMN2-F1-model_v4 Transcriptional regulator, TetR family 0.9497 19 174 GO:0000976
GO:0003700

Map