F420735

General Info

Members Datasets Scaffolds Average Seq Length
357 231 316 496

Family's Representative Sequence

Representative Sequence 3300005337|Ga0070682_100087745|Ga0070682_1000877452
Length 518
Sequence MNSETSTMSTTQESNSALAGVTLGGHDFSDLLKKEFRPKSPDAKSAIEAAVHTLAQQALQDTRLIGSEAIHSIEAMIAAIDAKLTAQINKILHHEDFKKLESAWRGLHYLVSNTETDEQLKIRVMNISKDDLAKTLKRYKGTAWDQSPIFKQIYEEEYGQFGGQPYGCLVGDYHFDHTAPDLGLLGEMAKIAAAAHAPFIAGASPAVMQMDSWQELANPRDLTKIFSTPEYAAWRSLRESDDARYLALCMPRVLARLPYGAKTLPVGEFNFEEDTGNRPGDAARAGGDEKADKHGKYLWSNAAYAMAVNINSSFKQYGWCSRIRGVESGGAVQGLPTHLFPTDDGGVDMKCPTEIAISDRREAELSKNGFLSMVHRKNSDFAAFISGQSLQKPAEYDDPDATANAALAARLPYLFACNRFAHYLKCIVRDKVGSFKSRDAMEDWLNAWILNYVDGDPMNSSEEVKATRPLAAAQVEVEEVEGAPGYYQSKFYLKPHYQLEGLTVSLRLVSKLPSEKSA

Samples

Sample ID Description Type Environment
1 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
2 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
3 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
4 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
5 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
6 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
7 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
8 2643221585 Pelomonas sp. Root662 Isolate Unclassified
9 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
10 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
11 2643221656 Pelomonas sp. Root405 Isolate Unclassified
12 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
13 2738541337 Pelomonas sp. BT06 Isolate Unclassified
14 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
15 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
16 2818991457 Xanthomonas translucens 569 Isolate Unclassified
17 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
18 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
19 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
20 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
21 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
22 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
23 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
24 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
25 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
26 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
27 2928536128 Burkholderia sola 565 Isolate Unclassified
28 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
29 2937967321 Serratia sp. YC16 Isolate Unclassified
30 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
31 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
32 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
33 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
34 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
35 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
36 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
37 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
38 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
39 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
40 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
41 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
42 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
43 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
44 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
45 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
46 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
47 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
48 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
49 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
50 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
51 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
52 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
53 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
54 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
55 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
56 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
57 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
58 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
59 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
60 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
61 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
62 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
63 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
64 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
65 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
66 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
67 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
68 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
69 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
70 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
71 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
72 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
73 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
74 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
78 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
79 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
80 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
84 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
85 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
86 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
87 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
88 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
91 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
92 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
93 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
94 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
101 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
102 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
105 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
125 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
127 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
128 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
129 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
130 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
131 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
132 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
133 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
134 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
135 3300032120 Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
136 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
137 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
138 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
141 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
142 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
143 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
144 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
145 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
146 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
147 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
148 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
149 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
150 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
151 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
152 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
153 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
154 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
155 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
156 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
157 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
158 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
159 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
160 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
161 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
162 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
163 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
164 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
165 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
166 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
167 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
168 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
169 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
170 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
171 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
172 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
173 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
174 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
175 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
176 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
177 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
178 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
179 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
180 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
181 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
182 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
183 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
184 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
185 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
186 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
187 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
188 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
189 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
190 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
191 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
192 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
193 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
194 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
195 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
196 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
197 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
198 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
199 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
200 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
201 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
202 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
203 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
204 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
205 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
206 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
207 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
208 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
209 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
210 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
211 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
212 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
213 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
214 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
215 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
216 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
217 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
218 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
219 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
220 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
221 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
222 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
223 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
224 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
225 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
226 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
227 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
228 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
229 8015394850 Serratia sp. PGPR-27 Isolate Rhizosphere
230 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
231 8054844752 Dryocola boscaweniae H18W14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.96
Metatranscriptomes 0.56
Isolates 11.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.96
Nodule 3.08
Rhizoplane 2.8
Rhizosphere 63.31
Stem 0
Stem Tuber 0
Unclassified 21.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10014543 3300001989 Bacteria 2863
2 JGI24735J21928_10002464 3300002067 Bacteria 6429
3 JGI25156J39149_1000975 3300002705 Bacteria 13635
4 JGI25156J39149_1002623 3300002705 Bacteria 6323
5 JGI25165J46597_1001420 3300003214 Bacteria 12918
6 rootH2_10015404 3300003320 Bacteria 31680
7 rootL2_10000217 3300003322 Bacteria 81342
8 JGI25160J50197_1000064 3300003354 Bacteria 115987
9 Ga0055533_1000126 3300003756 Bacteria 86699
10 Ga0055532_1000001 3300003758 Bacteria 1119836
11 Ga0055527_1000014 3300003760 Bacteria 289449
12 Ga0055535_1000001 3300003761 Bacteria 1119836
13 Ga0055542_1000001 3300003762 Bacteria 1119836
14 Ga0055529_1000001 3300003763 Bacteria 826680
15 Ga0055526_1000924 3300003771 Bacteria 21812
16 Ga0055537_1000774 3300003773 Bacteria 16096
17 Ga0055536_1000051 3300003781 Bacteria 111831
18 Ga0055534_1003326 3300003784 Bacteria 5091
19 Ga0055531_10000046 3300003794 Bacteria 131979
20 Ga0058692_1000081 3300003856 Bacteria 69376
21 Ga0058692_1000191 3300003856 Bacteria 37409
22 Ga0065165_1000325 3300005262 Bacteria 77723
23 Ga0070658_10013579 3300005327 Bacteria 6534
24 Ga0070676_10000333 3300005328 Bacteria 21429
25 Ga0070676_10007391 3300005328 Bacteria 5895
26 Ga0070676_10085999 3300005328 Bacteria 1917
27 Ga0070670_100042815 3300005331 Bacteria 3894
28 Ga0068869_100037073 3300005334 Bacteria 3465
29 Ga0070682_100087745 3300005337 Bacteria 2029
30 Ga0070660_100000135 3300005339 Bacteria 47104
31 Ga0070660_100000195 3300005339 Bacteria 40432
32 Ga0070660_100006070 3300005339 Bacteria 8351
33 Ga0070671_100097953 3300005355 Bacteria 2460
34 Ga0070659_100000227 3300005366 Bacteria 43665
35 Ga0070659_100000271 3300005366 Bacteria 40568
36 Ga0070667_100087043 3300005367 Bacteria 2681
37 Ga0070694_100004139 3300005444 Bacteria 8719
38 Ga0070663_100000124 3300005455 Bacteria 36590
39 Ga0070663_100000359 3300005455 Bacteria 23921
40 Ga0070699_100035919 3300005518 Bacteria 4285
41 Ga0070695_100000871 3300005545 Bacteria 16240
42 Ga0070696_100089314 3300005546 Bacteria 2191
43 Ga0070693_100005449 3300005547 Bacteria 6117
44 Ga0068855_100001540 3300005563 Bacteria 28979
45 Ga0068855_100015262 3300005563 Bacteria 9246
46 Ga0068855_100024840 3300005563 Bacteria 7169
47 Ga0068852_100002114 3300005616 Bacteria 13597
48 Ga0068852_100016372 3300005616 Bacteria 5779
49 Ga0068864_100254964 3300005618 Bacteria 1630
50 Ga0075430_100002943 3300006846 Bacteria 14250
51 Ga0075431_100003774 3300006847 Bacteria 14727
52 Ga0099826_10000009 3300006948 Bacteria 336081
53 Ga0105251_10001432 3300009011 Bacteria 20566
54 Ga0105244_10000079 3300009036 Bacteria 107070
55 Ga0105244_10001806 3300009036 Bacteria 16741
56 Ga0105244_10012408 3300009036 Bacteria 5035
57 Ga0105250_10008440 3300009092 Bacteria 4376
58 Ga0105240_10001000 3300009093 Bacteria 50488
59 Ga0105240_10002422 3300009093 Bacteria 29985
60 Ga0105240_10005177 3300009093 Bacteria 19504
61 Ga0105240_10005419 3300009093 Bacteria 19014
62 Ga0105240_10011275 3300009093 Bacteria 12462
63 Ga0114129_10004058 3300009147 Bacteria 20668
64 Ga0105243_10000250 3300009148 Bacteria 61801
65 Ga0105243_10018553 3300009148 Bacteria 5272
66 Ga0105243_10044899 3300009148 Bacteria 3469
67 Ga0105241_10007261 3300009174 Bacteria 8156
68 Ga0105237_10003929 3300009545 Bacteria 17406
69 Ga0105238_10001185 3300009551 Bacteria 26227
70 Ga0105249_10067330 3300009553 Bacteria 3299
71 Ga0105239_10000711 3300010375 Bacteria 47192
72 Ga0105239_10001605 3300010375 Bacteria 29878
73 Ga0105239_10004753 3300010375 Bacteria 16127
74 Ga0157373_10007719 3300013100 Bacteria 7995
75 Ga0157373_10008033 3300013100 Bacteria 7841
76 Ga0157371_10001252 3300013102 Bacteria 26857
77 Ga0157370_10002384 3300013104 Bacteria 22669
78 Ga0157370_10014518 3300013104 Bacteria 8052
79 Ga0157370_10110121 3300013104 Bacteria 2574
80 Ga0157369_10000590 3300013105 Bacteria 47190
81 Ga0157369_10004016 3300013105 Bacteria 17440
82 Ga0157369_10023097 3300013105 Bacteria 6930
83 Ga0157374_10002645 3300013296 Bacteria 15082
84 Ga0163162_10166179 3300013306 Bacteria 2330
85 Ga0157372_10004855 3300013307 Bacteria 14290
86 Ga0157372_10020425 3300013307 Bacteria 7145
87 Ga0182008_10048089 3300014497 Bacteria 2118
88 Ga0182006_1007182 3300015261 Bacteria 5119
89 Ga0182007_10000265 3300015262 Bacteria 34817
90 Ga0182005_1016538 3300015265 Bacteria 2051
91 Ga0209674_100005 3300025226 Bacteria 1708125
92 Ga0209672_100001 3300025228 Bacteria 2828210
93 Ga0209672_100634 3300025228 Bacteria 18174
94 Ga0209147_100001 3300025229 Bacteria 2384371
95 Ga0209563_100860 3300025230 Bacteria 9027
96 Ga0209258_100001 3300025242 Bacteria 2384269
97 Ga0209148_1000003 3300025254 Bacteria 2384288
98 Ga0209148_1004337 3300025254 Bacteria 3524
99 Ga0209759_1000275 3300025256 Bacteria 72571
100 Ga0209759_1002695 3300025256 Bacteria 7586
101 Ga0209759_1002801 3300025256 Bacteria 7358
102 Ga0209233_1000016 3300025261 Bacteria 907830
103 Ga0209455_1000001 3300025272 Bacteria 2384278
104 Ga0209050_1006012 3300025298 Bacteria 7355
105 Ga0207426_1000050 3300025302 Bacteria 393022
106 Ga0209051_1008009 3300025303 Bacteria 5669
107 Ga0209257_1000047 3300025304 Bacteria 460507
108 Ga0207655_1000188 3300025728 Bacteria 109393
109 Ga0207713_1000191 3300025735 Bacteria 85634
110 Ga0207713_1000583 3300025735 Bacteria 36337
111 Ga0207647_10008203 3300025904 Bacteria 7504
112 Ga0207647_10019033 3300025904 Bacteria 4625
113 Ga0207705_10004571 3300025909 Bacteria 10451
114 Ga0207654_10004351 3300025911 Bacteria 7137
115 Ga0207695_10000203 3300025913 Bacteria 163681
116 Ga0207695_10002129 3300025913 Bacteria 29989
117 Ga0207695_10003824 3300025913 Bacteria 20862
118 Ga0207695_10025827 3300025913 Bacteria 6566
119 Ga0207671_10004271 3300025914 Bacteria 13747
120 Ga0207657_10000044 3300025919 Bacteria 116398
121 Ga0207657_10000367 3300025919 Bacteria 47554
122 Ga0207657_10000377 3300025919 Bacteria 47129
123 Ga0207694_10004073 3300025924 Bacteria 11490
124 Ga0207690_10000046 3300025932 Bacteria 116358
125 Ga0207690_10000193 3300025932 Bacteria 47164
126 Ga0207709_10000384 3300025935 Bacteria 43883
127 Ga0207709_10013112 3300025935 Bacteria 4569
128 Ga0207689_10020785 3300025942 Bacteria 5521
129 Ga0207667_10001080 3300025949 Bacteria 34633
130 Ga0207667_10001201 3300025949 Bacteria 32440
131 Ga0207667_10008677 3300025949 Bacteria 12045
132 Ga0207667_10021145 3300025949 Bacteria 7215
133 Ga0207712_10082125 3300025961 Bacteria 2348
134 Ga0207678_10000397 3300026067 Bacteria 39814
135 Ga0207678_10000933 3300026067 Bacteria 26641
136 Ga0207648_10071727 3300026089 Bacteria 3019
137 Ga0207698_10001146 3300026142 Bacteria 15423
138 Ga0207698_10011859 3300026142 Bacteria 5675
139 Ga0207698_10054912 3300026142 Bacteria 3067
140 Ga0209281_1001385 3300027111 Bacteria 14810
141 Ga0209371_1000235 3300027312 Bacteria 69492
142 Ga0209371_1000489 3300027312 Bacteria 38581
143 Ga0209371_1000504 3300027312 Bacteria 37459
144 Ga0209371_1010797 3300027312 Bacteria 2771
145 Ga0209282_1000017 3300027666 Bacteria 191482
146 Ga0265319_1004099 3300028563 Bacteria 7332
147 Ga0265318_10001377 3300028577 Bacteria 14426
148 Ga0307517_10079320 3300028786 Bacteria 2826
149 Ga0307515_10000085 3300028794 Bacteria 220502
150 Ga0307515_10000204 3300028794 Bacteria 145075
151 Ga0307515_10018412 3300028794 Bacteria 12641
152 Ga0268256_1000196 3300030500 Bacteria 69428
153 Ga0268256_1000414 3300030500 Bacteria 38582
154 Ga0268256_1000432 3300030500 Bacteria 37459
155 Ga0268256_1010228 3300030500 Bacteria 3053
156 Ga0265320_10002706 3300031240 Bacteria 12262
157 Ga0307513_10042083 3300031456 Bacteria 5034
158 Ga0307516_10007275 3300031730 Bacteria 12742
159 Ga0316053_100148 3300032120 Bacteria 2494
160 Ga0373936_0005354 3300035113 Bacteria 4832
161 Ga0395899_0002416 3300037312 Bacteria 15179
162 Ga0395899_0008054 3300037312 Bacteria 8114
163 Ga0395899_0027649 3300037312 Bacteria 4273
164 Ga0395900_0004252 3300037418 Bacteria 15198
165 Ga0395900_0009784 3300037418 Bacteria 9825
166 Ga0395900_0010462 3300037418 Bacteria 9488
167 Ga0395898_0000736 3300037466 Bacteria 57270
168 Ga0395898_0029295 3300037466 Bacteria 5516
169 Ga0395898_0055181 3300037466 Bacteria 3875
170 Ga0395905_0005947 3300037471 Bacteria 12359
171 Ga0395905_0014221 3300037471 Bacteria 7602
172 Ga0395905_0045304 3300037471 Bacteria 4126
173 Ga0436364_0069526 3300037853 Bacteria 3939
174 Ga0436364_0245816 3300037853 Bacteria 19569
175 Ga0395901_0004732 3300038443 Bacteria 13738
176 Ga0395901_0024761 3300038443 Bacteria 6162
177 Ga0400491_25505 3300038727 Bacteria 1733
178 Ga0436365_0906173 3300039437 Bacteria 3426
179 Ga0436361_0522664 3300039447 Bacteria 37496
180 Ga0436363_0806575 3300039450 Bacteria 5719
181 Ga0439447_009053 3300041407 Bacteria 3040
182 Ga0439448_0000082 3300042005 Bacteria 16729
183 Ga0439451_002661 3300042009 Bacteria 3624
184 Ga0439452_000608 3300042010 Bacteria 18296
185 Ga0466972_0004593 3300044658 Bacteria 6923
186 Ga0466960_0005786 3300044901 Bacteria 4922
187 Ga0466959_0066706 3300045049 Bacteria 2610
188 Ga0495592_0019438 3300046454 Bacteria 5167
189 Ga0495590_0006202 3300046457 Bacteria 4680
190 Ga0495629_0000104 3300046459 Bacteria 74918
191 Ga0495651_0023071 3300046462 Bacteria 4840
192 Ga0495653_0001243 3300046463 Bacteria 19715
193 Ga0495653_0024429 3300046463 Bacteria 4870
194 Ga0495653_0112807 3300046463 Bacteria 1951
195 Ga0495580_0001244 3300046472 Bacteria 22467
196 Ga0495580_0009676 3300046472 Bacteria 7566
197 Ga0495580_0018902 3300046472 Bacteria 5126
198 Ga0495580_0077661 3300046472 Bacteria 2316
199 Ga0495605_0002167 3300046474 Bacteria 12269
200 Ga0495605_0010364 3300046474 Bacteria 5218
201 Ga0495585_0087630 3300046492 Bacteria 1680
202 Ga0495594_0030195 3300046499 Bacteria 2930
203 Ga0495583_0002055 3300046506 Bacteria 18234
204 Ga0495606_0013815 3300046507 Bacteria 6348
205 Ga0495610_0000337 3300046512 Bacteria 49536
206 Ga0495610_0000575 3300046512 Bacteria 36492
207 Ga0495610_0001881 3300046512 Bacteria 18115
208 Ga0495616_0000563 3300046513 Bacteria 28025
209 Ga0495618_0007816 3300046514 Bacteria 6474
210 Ga0495618_0051067 3300046514 Bacteria 2613
211 Ga0495620_0030569 3300046515 Bacteria 2478
212 Ga0495628_0030405 3300046516 Bacteria 4372
213 Ga0495628_0067630 3300046516 Bacteria 2789
214 Ga0495630_0001003 3300046517 Bacteria 19584
215 Ga0495630_0004884 3300046517 Bacteria 9417
216 Ga0495630_0035072 3300046517 Bacteria 3749
217 Ga0495632_0030227 3300046519 Bacteria 2814
218 Ga0495666_0000111 3300046526 Bacteria 33614
219 Ga0495652_0001577 3300046529 Bacteria 24927
220 Ga0495665_0000045 3300046531 Bacteria 48613
221 Ga0495665_0006619 3300046531 Bacteria 6254
222 Ga0495640_0123818 3300046533 Bacteria 1678
223 Ga0495609_0000781 3300046538 Bacteria 23802
224 Ga0495622_0000018 3300046557 Bacteria 173985
225 Ga0495622_0000120 3300046557 Bacteria 68022
226 Ga0495622_0000184 3300046557 Bacteria 50642
227 Ga0495611_0012873 3300046648 Bacteria 3555
228 Ga0495623_0063688 3300046679 Bacteria 2308
229 Ga0495646_0005289 3300046680 Bacteria 8148
230 Ga0495646_0019657 3300046680 Bacteria 4272
231 Ga0495624_0001029 3300046690 Bacteria 21972
232 Ga0495624_0002192 3300046690 Bacteria 14911
233 Ga0495624_0007806 3300046690 Bacteria 7507
234 Ga0495624_0014375 3300046690 Bacteria 5372
235 Ga0495671_0000373 3300046692 Bacteria 36795
236 Ga0495649_0005115 3300046694 Bacteria 8419
237 Ga0495649_0043154 3300046694 Bacteria 2462
238 Ga0495581_0000392 3300047315 Bacteria 21998
239 Ga0495674_0014387 3300047319 Bacteria 7408
240 Ga0495674_0019841 3300047319 Bacteria 6230
241 Ga0495680_0006215 3300047322 Bacteria 11133
242 Ga0495683_0008757 3300047323 Bacteria 5400
243 Ga0495675_0048314 3300047444 Bacteria 2707
244 Ga0495679_000008 3300047446 Bacteria 367186
245 Ga0495673_0000096 3300047469 Bacteria 182792
246 Ga0495686_0000051 3300047472 Bacteria 263489
247 Ga0495593_0013934 3300047673 Bacteria 4580
248 Ga0495602_0001236 3300048088 Bacteria 25158
249 Ga0495602_0066300 3300048088 Bacteria 3111
250 Ga0496100_0000337 3300048903 Bacteria 22899
251 Ga0496101_0000328 3300048904 Bacteria 32459
252 Ga0496102_0000337 3300048905 Bacteria 57297
253 Ga0496104_0000150 3300048907 Bacteria 64685
254 Ga0496104_0037368 3300048907 Bacteria 4541
255 Ga0496105_0000239 3300048908 Bacteria 36916
256 Ga0496105_0024480 3300048908 Bacteria 4905
257 Ga0496105_0125101 3300048908 Bacteria 2119
258 Ga0496106_0054514 3300048909 Bacteria 3021
259 Ga0496116_0000181 3300048919 Bacteria 126124
260 Ga0496116_0000944 3300048919 Bacteria 35789
261 Ga0496116_0002909 3300048919 Bacteria 17494
262 Ga0496116_0023652 3300048919 Bacteria 4570
263 Ga0496117_0001783 3300048920 Bacteria 29454
264 Ga0496117_0003259 3300048920 Bacteria 19081
265 Ga0496117_0010107 3300048920 Bacteria 8662
266 Ga0496117_0010242 3300048920 Bacteria 8589
267 Ga0496117_0068493 3300048920 Bacteria 2395
268 Ga0496118_0000824 3300048921 Bacteria 49388
269 Ga0496118_0002616 3300048921 Bacteria 23884
270 Ga0496118_0002813 3300048921 Bacteria 22788
271 Ga0496118_0005482 3300048921 Bacteria 14399
272 Ga0496118_0013610 3300048921 Bacteria 7680
273 Ga0496119_0000118 3300048922 Bacteria 110788
274 Ga0496119_0000473 3300048922 Bacteria 54910
275 Ga0496119_0004653 3300048922 Bacteria 13531
276 Ga0496120_0000038 3300048923 Bacteria 204168
277 Ga0496120_0000119 3300048923 Bacteria 132692
278 Ga0496120_0000319 3300048923 Bacteria 79523
279 Ga0496121_0000141 3300048924 Bacteria 161556
280 Ga0496121_0001236 3300048924 Bacteria 44352
281 Ga0496121_0003583 3300048924 Bacteria 21931
282 Ga0496121_0004480 3300048924 Bacteria 18741
283 Ga0496121_0006285 3300048924 Bacteria 14848
284 Ga0496121_0006893 3300048924 Bacteria 13874
285 Ga0496122_0001510 3300048925 Bacteria 37083
286 Ga0496122_0002448 3300048925 Bacteria 26292
287 Ga0496122_0004998 3300048925 Bacteria 16044
288 Ga0496122_0012318 3300048925 Bacteria 8535
289 Ga0496122_0023617 3300048925 Bacteria 5409
290 Ga0496123_0000208 3300048926 Bacteria 119807
291 Ga0496123_0001262 3300048926 Bacteria 36371
292 Ga0496123_0002258 3300048926 Bacteria 24303
293 Ga0496123_0003410 3300048926 Bacteria 17887
294 Ga0496123_0004246 3300048926 Bacteria 15260
295 Ga0496124_0151197 3300048927 Bacteria 1820
296 Ga0496125_0001482 3300048928 Bacteria 33868
297 Ga0496125_0002326 3300048928 Bacteria 25026
298 Ga0496125_0047492 3300048928 Bacteria 3589
299 Ga0496126_0000754 3300048929 Bacteria 58668
300 Ga0496126_0001371 3300048929 Bacteria 38523
301 Ga0496126_0121283 3300048929 Bacteria 2267
302 Ga0495682_0004625 3300049460 Bacteria 5845
303 Ga0501032_0169158 3300049569 Bacteria 1433
304 Ga0501039_0079531 3300049575 Bacteria 2550
305 Ga0501043_0079573 3300049579 Bacteria 2575
306 Ga0501046_0050401 3300049580 Bacteria 3289
307 nmdc:mga05p37_6693_c1 3300050507 Bacteria 13583
308 nmdc:mga0qj67_760_c1 3300050509 Bacteria 21946
309 nmdc:mga06r32_5163_c1 3300050510 Bacteria 11734
310 nmdc:mga0n895_205029_c1 3300050512 Bacteria 2002
311 nmdc:mga0a205_5127_c1 3300050515 Bacteria 11781
312 Ga0500583_0001917 3300053092 Bacteria 6095
313 Ga0500641_0032722 3300053096 Bacteria 2059
314 Ga0500588_0001806 3300053146 Bacteria 4173
315 Ga0500616_0000029 3300053153 Bacteria 428959
316 Ga0587077_002243 3300059493 Bacteria 2256

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300014497 Ga0182008_10048089 Ga0182008_100480892 399
2 3300049569 Ga0501032_0169158 Ga0501032_0169158_174_1415 413
3 3300048908 Ga0496105_0125101 Ga0496105_0125101_862_2106 414
4 3300046512 Ga0495610_0001881 Ga0495610_0001881_15171_16427 418
5 3300048925 Ga0496122_0023617 Ga0496122_0023617_4138_5397 418
6 3300050512 nmdc:mga0n895_205029_c1 nmdc:mga0n895_205029_c1_694_1983 429
7 3300050515 nmdc:mga0a205_5127_c1 nmdc:mga0a205_5127_c1_10477_11766 429
8 3300005618 Ga0068864_100254964 Ga0068864_1002549641 465
9 3300045049 Ga0466959_0066706 Ga0466959_0066706_382_1884 466
10 3300028794 Ga0307515_10000085 Ga0307515_10000085182 474
11 3300037853 Ga0436364_0069526 Ga0436364_0069526_489_1919 476
12 3300039437 Ga0436365_0906173 Ga0436365_0906173_86_1516 476
13 3300005518 Ga0070699_100035919 Ga0070699_1000359192 477
14 3300031730 Ga0307516_10007275 Ga0307516_100072757 477
15 3300006846 Ga0075430_100002943 Ga0075430_1000029435 478
16 3300006847 Ga0075431_100003774 Ga0075431_1000037745 478
17 3300009147 Ga0114129_10004058 Ga0114129_100040586 478
18 3300032120 Ga0316053_100148 Ga0316053_1001481 478
19 3300050507 nmdc:mga05p37_6693_c1 nmdc:mga05p37_6693_c1_7282_8766 478
20 3300050509 nmdc:mga0qj67_760_c1 nmdc:mga0qj67_760_c1_13926_15410 478
21 3300050510 nmdc:mga06r32_5163_c1 nmdc:mga06r32_5163_c1_2512_3996 478
22 3300037853 Ga0436364_0245816 Ga0436364_0245816_16808_18292 481
23 3300028794 Ga0307515_10000204 Ga0307515_10000204127 484
24 3300046492 Ga0495585_0087630 Ga0495585_0087630_13_1470 484
25 iso_pu_bacteria 2885080285 2885083753 485
26 3300037312 Ga0395899_0008054 Ga0395899_0008054_1680_3173 486
27 3300037418 Ga0395900_0009784 Ga0395900_0009784_5061_6554 486
28 3300037466 Ga0395898_0055181 Ga0395898_0055181_1620_3113 486
29 3300038443 Ga0395901_0004732 Ga0395901_0004732_12101_13594 486
30 3300049579 Ga0501043_0079573 Ga0501043_0079573_399_1892 486
31 3300049580 Ga0501046_0050401 Ga0501046_0050401_1107_2600 486
32 3300037466 Ga0395898_0000736 Ga0395898_0000736_10340_11839 488
33 3300038443 Ga0395901_0024761 Ga0395901_0024761_1341_2840 488
34 3300005327 Ga0070658_10013579 Ga0070658_100135794 489
35 3300005328 Ga0070676_10085999 Ga0070676_100859992 489
36 3300005334 Ga0068869_100037073 Ga0068869_1000370732 489
37 3300005444 Ga0070694_100004139 Ga0070694_1000041392 489
38 3300005545 Ga0070695_100000871 Ga0070695_1000008719 489
39 3300005546 Ga0070696_100089314 Ga0070696_1000893142 489
40 3300005547 Ga0070693_100005449 Ga0070693_1000054495 489
41 3300005616 Ga0068852_100016372 Ga0068852_1000163724 489
42 3300009148 Ga0105243_10044899 Ga0105243_100448993 489
43 3300009174 Ga0105241_10007261 Ga0105241_100072613 489
44 3300009553 Ga0105249_10067330 Ga0105249_100673303 489
45 3300013306 Ga0163162_10166179 Ga0163162_101661792 489
46 3300025228 Ga0209672_100634 Ga0209672_1006346 489
47 3300025909 Ga0207705_10004571 Ga0207705_100045713 489
48 3300025911 Ga0207654_10004351 Ga0207654_100043513 489
49 3300025942 Ga0207689_10020785 Ga0207689_100207855 489
50 3300025949 Ga0207667_10001080 Ga0207667_1000108011 489
51 3300025961 Ga0207712_10082125 Ga0207712_100821253 489
52 3300026089 Ga0207648_10071727 Ga0207648_100717273 489
53 3300026142 Ga0207698_10011859 Ga0207698_100118594 489
54 3300037312 Ga0395899_0002416 Ga0395899_0002416_10381_11868 489
55 3300037418 Ga0395900_0004252 Ga0395900_0004252_6455_7942 489
56 3300037466 Ga0395898_0029295 Ga0395898_0029295_1703_3208 489
57 3300037471 Ga0395905_0005947 Ga0395905_0005947_1269_2756 489
58 3300046472 Ga0495580_0009676 Ga0495580_0009676_3214_4698 489
59 3300046472 Ga0495580_0077661 Ga0495580_0077661_195_1682 489
60 3300046499 Ga0495594_0030195 Ga0495594_0030195_1086_2573 489
61 3300046519 Ga0495632_0030227 Ga0495632_0030227_225_1712 489
62 3300046526 Ga0495666_0000111 Ga0495666_0000111_24916_26403 489
63 3300046531 Ga0495665_0000045 Ga0495665_0000045_26442_27929 489
64 3300046557 Ga0495622_0000120 Ga0495622_0000120_39308_40795 489
65 3300046690 Ga0495624_0002192 Ga0495624_0002192_13229_14716 489
66 3300046694 Ga0495649_0043154 Ga0495649_0043154_929_2422 489
67 3300047315 Ga0495581_0000392 Ga0495581_0000392_1529_3016 489
68 3300047469 Ga0495673_0000096 Ga0495673_0000096_176416_177909 489
69 3300047472 Ga0495686_0000051 Ga0495686_0000051_201350_202846 489
70 3300059493 Ga0587077_002243 Ga0587077_002243_750_2237 489
71 3300002067 JGI24735J21928_10002464 JGI24735J21928_100024647 490
72 3300005339 Ga0070660_100006070 Ga0070660_1000060705 490
73 3300005563 Ga0068855_100015262 Ga0068855_1000152626 490
74 3300009093 Ga0105240_10005419 Ga0105240_100054195 490
75 3300010375 Ga0105239_10004753 Ga0105239_100047535 490
76 3300013100 Ga0157373_10007719 Ga0157373_100077196 490
77 3300013104 Ga0157370_10002384 Ga0157370_1000238413 490
78 3300013105 Ga0157369_10004016 Ga0157369_100040166 490
79 3300013296 Ga0157374_10002645 Ga0157374_100026456 490
80 3300013307 Ga0157372_10004855 Ga0157372_100048557 490
81 3300025904 Ga0207647_10008203 Ga0207647_100082034 490
82 3300025919 Ga0207657_10000367 Ga0207657_1000036713 490
83 3300025949 Ga0207667_10008677 Ga0207667_100086778 490
84 3300037418 Ga0395900_0010462 Ga0395900_0010462_1675_3183 490
85 3300042005 Ga0439448_0000082 Ga0439448_0000082_11570_13078 490
86 3300046512 Ga0495610_0000575 Ga0495610_0000575_28912_30402 490
87 3300025256 Ga0209759_1002695 Ga0209759_10026954 491
88 3300039447 Ga0436361_0522664 Ga0436361_0522664_31097_32590 491
89 iso_pu_bacteria 2597489887 2597858640 491
90 iso_pu_bacteria 2643221585 2643937485 491
91 iso_pu_bacteria 2643221639 2644218697 491
92 iso_pu_bacteria 2643221646 2644256790 491
93 iso_pu_bacteria 2643221656 2644315023 491
94 iso_pu_bacteria 2738541337 2739058023 491
95 iso_pu_bacteria 2818991457 2819661804 491
96 iso_pu_bacteria 2852684882 2852688456 491
97 iso_pu_bacteria 2919130084 2919133901 491
98 iso_pu_bacteria 2929195423 2929199808 491
99 3300003781 Ga0055536_1000051 Ga0055536_100005145 492
100 3300042009 Ga0439451_002661 Ga0439451_002661_672_2240 492
101 3300046457 Ga0495590_0006202 Ga0495590_0006202_326_1804 492
102 3300046472 Ga0495580_0018902 Ga0495580_0018902_2400_3878 492
103 3300046474 Ga0495605_0010364 Ga0495605_0010364_1285_2763 492
104 3300046506 Ga0495583_0002055 Ga0495583_0002055_12713_14191 492
105 3300046507 Ga0495606_0013815 Ga0495606_0013815_2287_3765 492
106 3300046514 Ga0495618_0051067 Ga0495618_0051067_1114_2592 492
107 3300046515 Ga0495620_0030569 Ga0495620_0030569_699_2177 492
108 3300046517 Ga0495630_0004884 Ga0495630_0004884_3117_4682 492
109 3300046680 Ga0495646_0005289 Ga0495646_0005289_5180_6658 492
110 3300048926 Ga0496123_0001262 Ga0496123_0001262_11082_12566 492
111 3300049460 Ga0495682_0004625 Ga0495682_0004625_4044_5522 492
112 iso_pu_bacteria 2510065045 2510249191 492
113 iso_pu_bacteria 2718217991 2719642400 492
114 3300026142 Ga0207698_10054912 Ga0207698_100549122 493
115 iso_pu_bacteria 2513237166 2514049319 493
116 iso_pu_bacteria 2547132103 2547372244 493
117 iso_pu_bacteria 2843690924 2843693227 493
118 iso_pu_bacteria 2870068957 2870071019 493
119 iso_pu_bacteria 2870068957 2870075194 493
120 iso_pu_bacteria 2900634093 2900636025 493
121 iso_pu_bacteria 2904483920 2904484027 493
122 iso_pu_bacteria 641736154 642414818 493
123 iso_pu_bacteria 642555112 642597814 493
124 iso_pu_bacteria 642555113 642620500 493
125 iso_pu_bacteria 8020945358 8020951914 493
126 iso_pu_bacteria 8020945358 8020952202 493
127 3300003771 Ga0055526_1000924 Ga0055526_100092415 494
128 3300005328 Ga0070676_10000333 Ga0070676_100003338 494
129 3300005328 Ga0070676_10007391 Ga0070676_100073912 494
130 3300005355 Ga0070671_100097953 Ga0070671_1000979533 494
131 3300028563 Ga0265319_1004099 Ga0265319_10040993 494
132 3300028577 Ga0265318_10001377 Ga0265318_100013778 494
133 3300028786 Ga0307517_10079320 Ga0307517_100793203 494
134 3300031240 Ga0265320_10002706 Ga0265320_100027067 494
135 3300031456 Ga0307513_10042083 Ga0307513_100420833 494
136 3300038727 Ga0400491_25505 Ga0400491_25505_186_1685 494
137 3300048924 Ga0496121_0006285 Ga0496121_0006285_156_1646 494
138 3300048928 Ga0496125_0002326 Ga0496125_0002326_10707_12197 494
139 iso_pu_bacteria 2772190666 2772439743 494
140 iso_pu_bacteria 2775506706 2775540176 494
141 iso_pu_bacteria 2928536128 2928539292 494
142 iso_pu_bacteria 2937967321 2937968383 494
143 iso_pu_bacteria 3000376612 3000377944 494
144 iso_pu_bacteria 3000376612 3000378016 494
145 iso_pu_bacteria 8015394850 8015398393 494
146 iso_pu_bacteria 8054844752 8054847531 494
147 3300002705 JGI25156J39149_1002623 JGI25156J39149_10026233 495
148 3300003322 rootL2_10000217 rootL2_1000021739 495
149 3300003794 Ga0055531_10000046 Ga0055531_1000004630 495
150 3300003856 Ga0058692_1000081 Ga0058692_100008118 495
151 3300005331 Ga0070670_100042815 Ga0070670_1000428154 495
152 3300005337 Ga0070682_100087745 Ga0070682_1000877452 495
153 3300005367 Ga0070667_100087043 Ga0070667_1000870432 495
154 3300009093 Ga0105240_10002422 Ga0105240_1000242211 495
155 3300009148 Ga0105243_10000250 Ga0105243_1000025031 495
156 3300013307 Ga0157372_10020425 Ga0157372_100204253 495
157 3300015265 Ga0182005_1016538 Ga0182005_10165381 495
158 3300025298 Ga0209050_1006012 Ga0209050_10060127 495
159 3300025303 Ga0209051_1008009 Ga0209051_10080097 495
160 3300025304 Ga0209257_1000047 Ga0209257_1000047354 495
161 3300025913 Ga0207695_10002129 Ga0207695_1000212917 495
162 3300025935 Ga0207709_10000384 Ga0207709_1000038416 495
163 3300027312 Ga0209371_1000235 Ga0209371_100023518 495
164 3300027312 Ga0209371_1010797 Ga0209371_10107973 495
165 3300028794 Ga0307515_10018412 Ga0307515_100184126 495
166 3300030500 Ga0268256_1000196 Ga0268256_100019645 495
167 3300030500 Ga0268256_1010228 Ga0268256_10102283 495
168 3300035113 Ga0373936_0005354 Ga0373936_0005354_3158_4663 495
169 3300037312 Ga0395899_0027649 Ga0395899_0027649_2675_4168 495
170 3300037471 Ga0395905_0014221 Ga0395905_0014221_774_2267 495
171 3300039450 Ga0436363_0806575 Ga0436363_0806575_4080_5582 495
172 3300041407 Ga0439447_009053 Ga0439447_009053_1091_2584 495
173 3300044658 Ga0466972_0004593 Ga0466972_0004593_3462_4979 495
174 3300046454 Ga0495592_0019438 Ga0495592_0019438_1324_2856 495
175 3300046557 Ga0495622_0000018 Ga0495622_0000018_76274_77794 495
176 3300048921 Ga0496118_0013610 Ga0496118_0013610_4669_6162 495
177 3300049575 Ga0501039_0079531 Ga0501039_0079531_896_2389 495
178 3300053092 Ga0500583_0001917 Ga0500583_0001917_1456_2949 495
179 3300053096 Ga0500641_0032722 Ga0500641_0032722_351_1844 495
180 3300053146 Ga0500588_0001806 Ga0500588_0001806_1554_3053 495
181 3300053153 Ga0500616_0000029 Ga0500616_0000029_252824_254335 495
182 iso_pu_bacteria 2510065045 2510247364 495
183 iso_pu_bacteria 2512047030 2512351189 495
184 iso_pu_bacteria 2599185292 2599905305 495
185 iso_pu_bacteria 2718217991 2719638462 495
186 iso_pu_bacteria 2869551831 2869556078 495
187 3300003320 rootH2_10015404 rootH2_1001540415 496
188 3300003773 Ga0055537_1000774 Ga0055537_10007745 496
189 3300003784 Ga0055534_1003326 Ga0055534_10033264 496
190 3300005339 Ga0070660_100000135 Ga0070660_1000001359 496
191 3300005339 Ga0070660_100000195 Ga0070660_10000019522 496
192 3300005366 Ga0070659_100000227 Ga0070659_10000022728 496
193 3300005366 Ga0070659_100000271 Ga0070659_10000027122 496
194 3300005455 Ga0070663_100000124 Ga0070663_1000001249 496
195 3300005455 Ga0070663_100000359 Ga0070663_10000035910 496
196 3300005563 Ga0068855_100001540 Ga0068855_1000015409 496
197 3300005616 Ga0068852_100002114 Ga0068852_1000021142 496
198 3300009092 Ga0105250_10008440 Ga0105250_100084404 496
199 3300009093 Ga0105240_10005177 Ga0105240_1000517711 496
200 3300009093 Ga0105240_10011275 Ga0105240_100112756 496
201 3300009545 Ga0105237_10003929 Ga0105237_100039297 496
202 3300009551 Ga0105238_10001185 Ga0105238_100011859 496
203 3300010375 Ga0105239_10000711 Ga0105239_1000071132 496
204 3300010375 Ga0105239_10001605 Ga0105239_1000160514 496
205 3300013100 Ga0157373_10008033 Ga0157373_100080335 496
206 3300013104 Ga0157370_10014518 Ga0157370_100145185 496
207 3300013104 Ga0157370_10110121 Ga0157370_101101212 496
208 3300013105 Ga0157369_10000590 Ga0157369_1000059032 496
209 3300013105 Ga0157369_10023097 Ga0157369_100230974 496
210 3300015261 Ga0182006_1007182 Ga0182006_10071824 496
211 3300015262 Ga0182007_10000265 Ga0182007_100002653 496
212 3300025904 Ga0207647_10019033 Ga0207647_100190332 496
213 3300025913 Ga0207695_10003824 Ga0207695_100038249 496
214 3300025913 Ga0207695_10025827 Ga0207695_100258276 496
215 3300025914 Ga0207671_10004271 Ga0207671_100042715 496
216 3300025919 Ga0207657_10000044 Ga0207657_100000449 496
217 3300025919 Ga0207657_10000377 Ga0207657_100003779 496
218 3300025924 Ga0207694_10004073 Ga0207694_100040736 496
219 3300025932 Ga0207690_10000046 Ga0207690_100000469 496
220 3300025932 Ga0207690_10000193 Ga0207690_100001939 496
221 3300025949 Ga0207667_10001201 Ga0207667_100012019 496
222 3300026067 Ga0207678_10000397 Ga0207678_1000039722 496
223 3300026067 Ga0207678_10000933 Ga0207678_1000093321 496
224 3300026142 Ga0207698_10001146 Ga0207698_100011469 496
225 3300027312 Ga0209371_1000489 Ga0209371_100048931 496
226 3300030500 Ga0268256_1000414 Ga0268256_10004146 496
227 3300042010 Ga0439452_000608 Ga0439452_000608_11105_12601 496
228 3300044901 Ga0466960_0005786 Ga0466960_0005786_1994_3505 496
229 3300048907 Ga0496104_0037368 Ga0496104_0037368_770_2269 496
230 3300048908 Ga0496105_0024480 Ga0496105_0024480_2689_4188 496
231 3300048919 Ga0496116_0002909 Ga0496116_0002909_12171_13682 496
232 3300048920 Ga0496117_0010107 Ga0496117_0010107_6964_8463 496
233 3300048921 Ga0496118_0005482 Ga0496118_0005482_791_2290 496
234 3300048922 Ga0496119_0000118 Ga0496119_0000118_43806_45332 496
235 3300048923 Ga0496120_0000119 Ga0496120_0000119_43986_45512 496
236 3300048924 Ga0496121_0006893 Ga0496121_0006893_11619_13118 496
237 3300048925 Ga0496122_0004998 Ga0496122_0004998_13791_15290 496
238 3300048926 Ga0496123_0004246 Ga0496123_0004246_12976_14475 496
239 3300048928 Ga0496125_0047492 Ga0496125_0047492_799_2298 496
240 3300001989 JGI24739J22299_10014543 JGI24739J22299_100145433 497
241 3300002705 JGI25156J39149_1000975 JGI25156J39149_10009756 497
242 3300003214 JGI25165J46597_1001420 JGI25165J46597_10014206 497
243 3300003354 JGI25160J50197_1000064 JGI25160J50197_100006443 497
244 3300003756 Ga0055533_1000126 Ga0055533_100012639 497
245 3300003758 Ga0055532_1000001 Ga0055532_1000001900 497
246 3300003760 Ga0055527_1000014 Ga0055527_1000014105 497
247 3300003761 Ga0055535_1000001 Ga0055535_1000001105 497
248 3300003762 Ga0055542_1000001 Ga0055542_1000001899 497
249 3300003763 Ga0055529_1000001 Ga0055529_1000001105 497
250 3300003856 Ga0058692_1000191 Ga0058692_100019117 497
251 3300005262 Ga0065165_1000325 Ga0065165_100032520 497
252 3300005563 Ga0068855_100024840 Ga0068855_1000248404 497
253 3300006948 Ga0099826_10000009 Ga0099826_10000009225 497
254 3300009011 Ga0105251_10001432 Ga0105251_100014324 497
255 3300009036 Ga0105244_10000079 Ga0105244_1000007961 497
256 3300009036 Ga0105244_10001806 Ga0105244_100018068 497
257 3300009036 Ga0105244_10012408 Ga0105244_100124083 497
258 3300009093 Ga0105240_10001000 Ga0105240_100010009 497
259 3300009148 Ga0105243_10018553 Ga0105243_100185534 497
260 3300013102 Ga0157371_10001252 Ga0157371_100012527 497
261 3300025226 Ga0209674_100005 Ga0209674_1000051331 497
262 3300025228 Ga0209672_100001 Ga0209672_1000011727 497
263 3300025229 Ga0209147_100001 Ga0209147_1000011727 497
264 3300025230 Ga0209563_100860 Ga0209563_1008601 497
265 3300025242 Ga0209258_100001 Ga0209258_1000011727 497
266 3300025254 Ga0209148_1000003 Ga0209148_10000031727 497
267 3300025254 Ga0209148_1004337 Ga0209148_10043372 497
268 3300025256 Ga0209759_1000275 Ga0209759_100027510 497
269 3300025256 Ga0209759_1002801 Ga0209759_10028015 497
270 3300025261 Ga0209233_1000016 Ga0209233_1000016688 497
271 3300025272 Ga0209455_1000001 Ga0209455_10000011727 497
272 3300025302 Ga0207426_1000050 Ga0207426_1000050146 497
273 3300025728 Ga0207655_1000188 Ga0207655_100018888 497
274 3300025735 Ga0207713_1000191 Ga0207713_100019127 497
275 3300025735 Ga0207713_1000583 Ga0207713_100058315 497
276 3300025913 Ga0207695_10000203 Ga0207695_10000203124 497
277 3300025935 Ga0207709_10013112 Ga0207709_100131124 497
278 3300025949 Ga0207667_10021145 Ga0207667_100211454 497
279 3300027111 Ga0209281_1001385 Ga0209281_100138510 497
280 3300027312 Ga0209371_1000504 Ga0209371_100050417 497
281 3300027666 Ga0209282_1000017 Ga0209282_1000017131 497
282 3300030500 Ga0268256_1000432 Ga0268256_100043217 497
283 3300037471 Ga0395905_0045304 Ga0395905_0045304_445_1938 497
284 3300046459 Ga0495629_0000104 Ga0495629_0000104_68119_69612 497
285 3300046462 Ga0495651_0023071 Ga0495651_0023071_2868_4361 497
286 3300046463 Ga0495653_0001243 Ga0495653_0001243_4824_6317 497
287 3300046463 Ga0495653_0024429 Ga0495653_0024429_2083_3576 497
288 3300046463 Ga0495653_0112807 Ga0495653_0112807_73_1566 497
289 3300046472 Ga0495580_0001244 Ga0495580_0001244_16079_17572 497
290 3300046474 Ga0495605_0002167 Ga0495605_0002167_5033_6535 497
291 3300046512 Ga0495610_0000337 Ga0495610_0000337_27084_28586 497
292 3300046513 Ga0495616_0000563 Ga0495616_0000563_20985_22487 497
293 3300046514 Ga0495618_0007816 Ga0495618_0007816_357_1850 497
294 3300046516 Ga0495628_0030405 Ga0495628_0030405_1604_3097 497
295 3300046516 Ga0495628_0067630 Ga0495628_0067630_1056_2549 497
296 3300046517 Ga0495630_0001003 Ga0495630_0001003_13258_14751 497
297 3300046517 Ga0495630_0035072 Ga0495630_0035072_2024_3517 497
298 3300046529 Ga0495652_0001577 Ga0495652_0001577_11570_13072 497
299 3300046531 Ga0495665_0006619 Ga0495665_0006619_1042_2535 497
300 3300046533 Ga0495640_0123818 Ga0495640_0123818_17_1510 497
301 3300046538 Ga0495609_0000781 Ga0495609_0000781_12078_13580 497
302 3300046557 Ga0495622_0000184 Ga0495622_0000184_22824_24317 497
303 3300046648 Ga0495611_0012873 Ga0495611_0012873_1201_2694 497
304 3300046679 Ga0495623_0063688 Ga0495623_0063688_731_2224 497
305 3300046680 Ga0495646_0019657 Ga0495646_0019657_747_2240 497
306 3300046690 Ga0495624_0001029 Ga0495624_0001029_19183_20676 497
307 3300046690 Ga0495624_0007806 Ga0495624_0007806_1148_2641 497
308 3300046690 Ga0495624_0014375 Ga0495624_0014375_2676_4169 497
309 3300046692 Ga0495671_0000373 Ga0495671_0000373_27204_28706 497
310 3300046694 Ga0495649_0005115 Ga0495649_0005115_2409_3911 497
311 3300047319 Ga0495674_0014387 Ga0495674_0014387_1448_2941 497
312 3300047319 Ga0495674_0019841 Ga0495674_0019841_2297_3790 497
313 3300047322 Ga0495680_0006215 Ga0495680_0006215_829_2322 497
314 3300047323 Ga0495683_0008757 Ga0495683_0008757_1300_2793 497
315 3300047444 Ga0495675_0048314 Ga0495675_0048314_1165_2664 497
316 3300047446 Ga0495679_000008 Ga0495679_000008_304079_305572 497
317 3300047673 Ga0495593_0013934 Ga0495593_0013934_1146_2639 497
318 3300048088 Ga0495602_0001236 Ga0495602_0001236_18429_19922 497
319 3300048088 Ga0495602_0066300 Ga0495602_0066300_356_1849 497
320 3300048903 Ga0496100_0000337 Ga0496100_0000337_10402_11898 497
321 3300048904 Ga0496101_0000328 Ga0496101_0000328_11266_12762 497
322 3300048905 Ga0496102_0000337 Ga0496102_0000337_44265_45761 497
323 3300048907 Ga0496104_0000150 Ga0496104_0000150_31381_32880 497
324 3300048908 Ga0496105_0000239 Ga0496105_0000239_21759_23258 497
325 3300048909 Ga0496106_0054514 Ga0496106_0054514_524_2020 497
326 3300048919 Ga0496116_0000181 Ga0496116_0000181_113612_115111 497
327 3300048919 Ga0496116_0000944 Ga0496116_0000944_17189_18688 497
328 3300048919 Ga0496116_0023652 Ga0496116_0023652_2947_4449 497
329 3300048920 Ga0496117_0001783 Ga0496117_0001783_10671_12170 497
330 3300048920 Ga0496117_0003259 Ga0496117_0003259_12436_13938 497
331 3300048920 Ga0496117_0010242 Ga0496117_0010242_4820_6316 497
332 3300048920 Ga0496117_0068493 Ga0496117_0068493_611_2104 497
333 3300048921 Ga0496118_0000824 Ga0496118_0000824_3656_5152 497
334 3300048921 Ga0496118_0002616 Ga0496118_0002616_5458_6960 497
335 3300048921 Ga0496118_0002813 Ga0496118_0002813_10425_11924 497
336 3300048922 Ga0496119_0000473 Ga0496119_0000473_24160_25659 497
337 3300048922 Ga0496119_0004653 Ga0496119_0004653_6490_7989 497
338 3300048923 Ga0496120_0000038 Ga0496120_0000038_91836_93335 497
339 3300048923 Ga0496120_0000319 Ga0496120_0000319_34406_35905 497
340 3300048924 Ga0496121_0000141 Ga0496121_0000141_120971_122473 497
341 3300048924 Ga0496121_0001236 Ga0496121_0001236_22229_23728 497
342 3300048924 Ga0496121_0003583 Ga0496121_0003583_5655_7157 497
343 3300048924 Ga0496121_0004480 Ga0496121_0004480_10854_12350 497
344 3300048925 Ga0496122_0001510 Ga0496122_0001510_18072_19571 497
345 3300048925 Ga0496122_0002448 Ga0496122_0002448_12238_13740 497
346 3300048925 Ga0496122_0012318 Ga0496122_0012318_1597_3111 497
347 3300048926 Ga0496123_0000208 Ga0496123_0000208_100846_102348 497
348 3300048926 Ga0496123_0002258 Ga0496123_0002258_14875_16374 497
349 3300048926 Ga0496123_0003410 Ga0496123_0003410_13012_14526 497
350 3300048927 Ga0496124_0151197 Ga0496124_0151197_259_1758 497
351 3300048928 Ga0496125_0001482 Ga0496125_0001482_11025_12524 497
352 3300048929 Ga0496126_0000754 Ga0496126_0000754_35522_37021 497
353 3300048929 Ga0496126_0001371 Ga0496126_0001371_26387_27889 497
354 3300048929 Ga0496126_0121283 Ga0496126_0121283_307_1803 497
355 iso_pu_bacteria 2515154122 2515684597 497
356 iso_pu_bacteria 2857357740 2857365914 497
357 iso_pu_bacteria 2902682994 2902684600 497

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05943

VipB

EvpB/VC_A0108, tail sheath N-terminal domain

74

391

0.99

PF18945

VipB_2

EvpB/VC_A0108, tail sheath gpW/gp25-like domain

400

512

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5urx-assembly1.cif.gz_1B structure of the contracted type vi secretion system sheath in myxococcus xanthus 0.9339 64 488
3j9g-assembly1.cif.gz_B atomic model of the vipa/vipb, the type six secretion system contractile sheath of vibrio cholerae from cryo-em 0.9324 61 488
3j9g-assembly1.cif.gz_B atomic model of the vipa/vipb, the type six secretion system contractile sheath of vibrio cholerae from cryo-em 0.9177 61 488
5urx-assembly1.cif.gz_1B structure of the contracted type vi secretion system sheath in myxococcus xanthus 0.9149 64 488
3j9o-assembly1.cif.gz_B-1 cryoem structure of a type vi secretion system 0.9073 71 486
ID Description Score Start End Superfamily
af_Q9VQX9_176_349_2.70.160.11 Mainly Beta;Distorted Sandwich;Hnrnp arginine n-methyltransferase1;Hnrnp arginine n-methyltransferase1 0.7876 453 490 2.70.160.11
4wnyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7864 157 194 3.40.50.620
af_Q9JI83_24_137_2.60.40.3210 Mainly Beta;Sandwich;Immunoglobulin-like;Zona pellucida, ZP-N domain 0.7667 453 491 2.60.40.3210
af_O94672_122_399_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.7478 168 195 3.40.50.410
2qkdA01 Mainly Beta;Single Sheet;N-terminal domain of TfIIb;ZPR1, zinc finger domain 0.744 450 489 2.20.25.420
ID Description Score Start End GO Terms
AF-A0A7X6EQ28-F1-model_v4 deleted 0.9923 297 369
AF-A0A7X1EUK4-F1-model_v4 deleted 0.9875 153 246
AF-A0A7X5N2G0-F1-model_v4 Type VI secretion system contractile sheath large subunit 0.984 275 401
AF-A0A659XXL1-F1-model_v4 Type VI secretion system contractile sheath large subunit 0.9827 277 341
AF-A0A3S5DD80-F1-model_v4 EvpB family type VI secretion protein 0.982 105 348

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Predicted Structure (AlphaFold2)

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