F420137

General Info

Members Datasets Scaffolds Average Seq Length
355 199 710 269

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10113215|Ga0157380_101132152
Length 270
Sequence MRKRITGFSNPTVKAVRALRDKKHRKRERRFLAEGLRLLTDAREAGRLPEILLMAEGREAHPLLDALESAAEEAGGEVLELAPELLAKVTGKNNPQAVAGVFAEWDIGLDAIERSARLLLAAQALRDPGNLGTMLRTADAVGAGGLILLDDCADPFSVEAVRASMGAVFTVRLAQARWEEFVPWLRAGPGQLVAASLRDAVPYRGAPYRSPCVVLVGNESRGLPEDYEAACDLRVTIPMRGRADSLNAAVAAAVLAYEVDAALNPPRSAR

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
44 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
90 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
91 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
96 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
105 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
106 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
107 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
110 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
111 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
112 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
113 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
114 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
115 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
116 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
122 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
123 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
124 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
125 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
126 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
133 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
134 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
135 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
151 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
161 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
162 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
168 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
169 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
170 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
171 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
174 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
175 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
178 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
179 3300053723 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 endosphere Metagenome Endosphere
180 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
181 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
182 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
183 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
184 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
185 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
186 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
187 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
188 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
189 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
190 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
191 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
192 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
193 2896184354 Aurantiacibacter suaedae GH3-15 Isolate Rhizosphere
194 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
195 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
196 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
197 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
198 3000865235 Altericroceibacterium indicum DSM 18604 Isolate Rhizosphere
199 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.93
Metatranscriptomes 0
Isolates 5.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.96
Nodule 0.28
Rhizoplane 6.76
Rhizosphere 65.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10113215 3300014326 Bacteria 2284
2 SwRhRL2b_contig_1373448 2162886007 Bacteria 4470
3 SwRhRL2b_contig_848841 2162886007 Bacteria 8685
4 JGI24748J21848_1002134 3300002074 Bacteria 2214
5 JGI24751J29686_10000080 3300002459 Bacteria 54264
6 Ga0065704_10000191 3300005289 Bacteria 318191
7 Ga0065704_10070424 3300005289 Bacteria 25504
8 Ga0065704_10120565 3300005289 Bacteria 1781
9 Ga0070658_10007368 3300005327 Bacteria 8888
10 Ga0070658_10022478 3300005327 Bacteria 5061
11 Ga0070683_100067064 3300005329 Bacteria 3342
12 Ga0070670_100065399 3300005331 Bacteria 3120
13 Ga0070670_100113489 3300005331 Bacteria 2336
14 Ga0070680_100008906 3300005336 Bacteria 7694
15 Ga0070660_100002832 3300005339 Bacteria 11936
16 Ga0070660_100346881 3300005339 Bacteria 1222
17 Ga0070661_100001999 3300005344 Bacteria 14104
18 Ga0070661_100138901 3300005344 Bacteria 1830
19 Ga0070668_100004238 3300005347 Bacteria 10640
20 Ga0070668_100005956 3300005347 Bacteria 9040
21 Ga0070668_100041518 3300005347 Bacteria 3525
22 Ga0070668_100041568 3300005347 Bacteria 3522
23 Ga0070669_100001258 3300005353 Bacteria 18395
24 Ga0070669_100003497 3300005353 Bacteria 11324
25 Ga0070669_100008686 3300005353 Bacteria 7247
26 Ga0070675_100522688 3300005354 Bacteria 1071
27 Ga0070671_100000066 3300005355 Bacteria 70998
28 Ga0070671_100013029 3300005355 Bacteria 6702
29 Ga0070671_100065701 3300005355 Bacteria 3022
30 Ga0070671_100175733 3300005355 Bacteria 1812
31 Ga0070659_100047030 3300005366 Bacteria 3383
32 Ga0070659_100222886 3300005366 Bacteria 1557
33 Ga0070667_100001146 3300005367 Bacteria 24031
34 Ga0070667_100002247 3300005367 Bacteria 17006
35 Ga0070667_100042623 3300005367 Bacteria 3808
36 Ga0070667_100088797 3300005367 Bacteria 2654
37 Ga0070705_100345247 3300005440 Bacteria 1083
38 Ga0070662_100001119 3300005457 Bacteria 16375
39 Ga0070662_100013317 3300005457 Bacteria 5472
40 Ga0070662_100085322 3300005457 Bacteria 2359
41 Ga0070681_10002647 3300005458 Bacteria 16442
42 Ga0070679_100006503 3300005530 Bacteria 10896
43 Ga0070679_100007172 3300005530 Bacteria 10407
44 Ga0070679_100023213 3300005530 Bacteria 6070
45 Ga0070679_100133589 3300005530 Bacteria 2463
46 Ga0068853_100013867 3300005539 Bacteria 6587
47 Ga0070686_100030216 3300005544 Bacteria 3303
48 Ga0070665_100000107 3300005548 Bacteria 156048
49 Ga0070665_100033492 3300005548 Bacteria 5169
50 Ga0068855_100007587 3300005563 Bacteria 13122
51 Ga0068855_100031505 3300005563 Bacteria 6331
52 Ga0068855_100444933 3300005563 Bacteria 1415
53 Ga0070664_100014622 3300005564 Bacteria 6405
54 Ga0070664_100047223 3300005564 Bacteria 3637
55 Ga0068857_100007693 3300005577 Bacteria 9284
56 Ga0068857_100059797 3300005577 Bacteria 3386
57 Ga0068857_100327253 3300005577 Bacteria 1416
58 Ga0068854_100000494 3300005578 Bacteria 24007
59 Ga0068854_100051577 3300005578 Bacteria 2948
60 Ga0068852_100219629 3300005616 Bacteria 1807
61 Ga0068852_100280969 3300005616 Bacteria 1605
62 Ga0068863_100001802 3300005841 Bacteria 21263
63 Ga0068863_100012416 3300005841 Bacteria 8225
64 Ga0068858_100017260 3300005842 Bacteria 6771
65 Ga0068858_100054975 3300005842 Bacteria 3680
66 Ga0068858_100080173 3300005842 Bacteria 3033
67 Ga0068858_100335743 3300005842 Bacteria 1446
68 Ga0068860_100000008 3300005843 Bacteria 427367
69 Ga0068860_100012538 3300005843 Bacteria 8346
70 Ga0068860_100014365 3300005843 Bacteria 7761
71 Ga0068860_100111197 3300005843 Bacteria 2619
72 Ga0068860_100271392 3300005843 Bacteria 1656
73 Ga0068862_100003636 3300005844 Bacteria 13191
74 Ga0068862_100006131 3300005844 Bacteria 10007
75 Ga0068862_100021657 3300005844 Bacteria 5374
76 Ga0075365_10022117 3300006038 Bacteria 3979
77 Ga0075368_10001554 3300006042 Bacteria 7370
78 Ga0075364_10009566 3300006051 Bacteria 5820
79 Ga0075364_10022615 3300006051 Bacteria 3972
80 Ga0075432_10002185 3300006058 Bacteria 6513
81 Ga0075362_10027599 3300006177 Bacteria 2432
82 Ga0075362_10035608 3300006177 Bacteria 2174
83 Ga0075367_10004752 3300006178 Bacteria 6681
84 Ga0075369_10004755 3300006186 Bacteria 5043
85 Ga0075366_10006178 3300006195 Bacteria 6538
86 Ga0075366_10208425 3300006195 Bacteria 1189
87 Ga0075370_10015431 3300006353 Bacteria 4091
88 Ga0075370_10036100 3300006353 Bacteria 2775
89 Ga0075370_10181729 3300006353 Bacteria 1238
90 Ga0105251_10005734 3300009011 Bacteria 8055
91 Ga0105250_10001326 3300009092 Bacteria 13524
92 Ga0105240_10275534 3300009093 Bacteria 1935
93 Ga0111539_10396613 3300009094 Bacteria 1607
94 Ga0105247_10156365 3300009101 Bacteria 1506
95 Ga0105241_10015087 3300009174 Bacteria 5659
96 Ga0105248_10022643 3300009177 Bacteria 6973
97 Ga0105248_10148901 3300009177 Bacteria 2641
98 Ga0105237_10201892 3300009545 Bacteria 1988
99 Ga0105249_10135334 3300009553 Bacteria 2357
100 Ga0105246_10000505 3300011119 Bacteria 21244
101 Ga0157373_10037661 3300013100 Bacteria 3466
102 Ga0157373_10040405 3300013100 Bacteria 3338
103 Ga0157371_10005723 3300013102 Bacteria 10419
104 Ga0157370_10038512 3300013104 Bacteria 4624
105 Ga0157370_10265772 3300013104 Bacteria 1585
106 Ga0157369_10061330 3300013105 Bacteria 4054
107 Ga0163162_10005623 3300013306 Bacteria 12112
108 Ga0163162_10039156 3300013306 Bacteria 4736
109 Ga0157372_10011782 3300013307 Bacteria 9314
110 Ga0157372_10277971 3300013307 Bacteria 1947
111 Ga0157375_10207728 3300013308 Bacteria 2115
112 Ga0157380_10778544 3300014326 Bacteria 971
113 Ga0163161_10026424 3300017792 Bacteria 4111
114 Ga0209050_1000370 3300025298 Bacteria 85916
115 Ga0207696_1006360 3300025711 Bacteria 4766
116 Ga0207713_1001941 3300025735 Bacteria 15635
117 Ga0207680_10070528 3300025903 Bacteria 2163
118 Ga0207647_10182439 3300025904 Bacteria 1218
119 Ga0207705_10009457 3300025909 Bacteria 7089
120 Ga0207705_10053780 3300025909 Bacteria 2901
121 Ga0207705_10683012 3300025909 Bacteria 798
122 Ga0207654_10019536 3300025911 Bacteria 3577
123 Ga0207707_10171057 3300025912 Bacteria 1898
124 Ga0207660_10034276 3300025917 Bacteria 3517
125 Ga0207657_10001019 3300025919 Bacteria 29733
126 Ga0207657_10094991 3300025919 Bacteria 2481
127 Ga0207652_10077599 3300025921 Bacteria 2899
128 Ga0207652_10136356 3300025921 Bacteria 2192
129 Ga0207652_10421274 3300025921 Bacteria 1204
130 Ga0207681_10000505 3300025923 Bacteria 27187
131 Ga0207681_10004768 3300025923 Bacteria 8346
132 Ga0207681_10016888 3300025923 Bacteria 4576
133 Ga0207681_10053084 3300025923 Bacteria 2751
134 Ga0207659_10384502 3300025926 Bacteria 1171
135 Ga0207644_10000087 3300025931 Bacteria 67315
136 Ga0207644_10000340 3300025931 Bacteria 30290
137 Ga0207644_10055117 3300025931 Bacteria 2865
138 Ga0207644_10176275 3300025931 Bacteria 1673
139 Ga0207706_10004727 3300025933 Bacteria 12751
140 Ga0207706_10023370 3300025933 Bacteria 5552
141 Ga0207706_10068203 3300025933 Bacteria 3130
142 Ga0207711_10057337 3300025941 Bacteria 3348
143 Ga0207711_10583966 3300025941 Bacteria 1042
144 Ga0207661_10012259 3300025944 Bacteria 6225
145 Ga0207679_10031392 3300025945 Bacteria 3718
146 Ga0207667_10020525 3300025949 Bacteria 7344
147 Ga0207667_10033706 3300025949 Bacteria 5504
148 Ga0207667_10097617 3300025949 Bacteria 3032
149 Ga0207667_10347930 3300025949 Bacteria 1512
150 Ga0207668_10002561 3300025972 Bacteria 10621
151 Ga0207668_10005571 3300025972 Bacteria 7423
152 Ga0207668_10038117 3300025972 Bacteria 3223
153 Ga0207640_10001840 3300025981 Bacteria 11377
154 Ga0207640_10123658 3300025981 Bacteria 1858
155 Ga0207658_10000342 3300025986 Bacteria 46128
156 Ga0207658_10001650 3300025986 Bacteria 17032
157 Ga0207658_10013921 3300025986 Bacteria 5504
158 Ga0207703_10012009 3300026035 Bacteria 6745
159 Ga0207703_10069177 3300026035 Bacteria 2911
160 Ga0207639_10011566 3300026041 Bacteria 6132
161 Ga0207641_10000102 3300026088 Bacteria 122366
162 Ga0207641_10005655 3300026088 Bacteria 10641
163 Ga0207641_10025049 3300026088 Bacteria 4919
164 Ga0207676_10029973 3300026095 Bacteria 4078
165 Ga0207674_10044645 3300026116 Bacteria 4565
166 Ga0207674_10076759 3300026116 Bacteria 3348
167 Ga0207674_10477801 3300026116 Bacteria 1205
168 Ga0207698_10221840 3300026142 Bacteria 1709
169 Ga0209281_1023298 3300027111 Bacteria 1175
170 Ga0209813_10000064 3300027866 Bacteria 43230
171 Ga0209974_10012363 3300027876 Bacteria 2855
172 Ga0268266_10000462 3300028379 Bacteria 59105
173 Ga0268266_10015885 3300028379 Bacteria 6443
174 Ga0268265_10028732 3300028380 Bacteria 3985
175 Ga0268265_10215128 3300028380 Bacteria 1677
176 Ga0268265_10260849 3300028380 Bacteria 1540
177 Ga0268265_10348974 3300028380 Bacteria 1350
178 Ga0268264_10000018 3300028381 Bacteria 495324
179 Ga0268264_10010046 3300028381 Bacteria 7834
180 Ga0268264_10019317 3300028381 Bacteria 5570
181 Ga0268264_10019338 3300028381 Bacteria 5566
182 Ga0268264_10247128 3300028381 Bacteria 1656
183 Ga0265331_10020470 3300031250 Bacteria 3395
184 Ga0265327_10086408 3300031251 Bacteria 1538
185 Ga0307408_100250374 3300031548 Bacteria 1461
186 Ga0307508_10260660 3300031616 Bacteria 1328
187 Ga0316579_10031243 3300031691 Bacteria 2437
188 Ga0307405_10001359 3300031731 Bacteria 10262
189 Ga0307405_10006672 3300031731 Bacteria 5699
190 Ga0307413_10011697 3300031824 Bacteria 4332
191 Ga0307413_10099671 3300031824 Bacteria 1916
192 Ga0307413_10151937 3300031824 Bacteria 1615
193 Ga0307410_10012246 3300031852 Bacteria 4950
194 Ga0307410_10126246 3300031852 Bacteria 1873
195 Ga0307406_10059240 3300031901 Bacteria 2464
196 Ga0307407_10101243 3300031903 Bacteria 1788
197 Ga0307407_10130147 3300031903 Bacteria 1609
198 Ga0307412_10007413 3300031911 Bacteria 6222
199 Ga0307412_10065624 3300031911 Bacteria 2457
200 Ga0307412_10111887 3300031911 Bacteria 1951
201 Ga0307412_10243915 3300031911 Bacteria 1391
202 Ga0307409_100194222 3300031995 Bacteria 1810
203 Ga0307416_100027446 3300032002 Bacteria 4216
204 Ga0307416_100889738 3300032002 Bacteria 990
205 Ga0307414_10011804 3300032004 Bacteria 5140
206 Ga0307414_10049507 3300032004 Bacteria 2906
207 Ga0307414_10427116 3300032004 Bacteria 1157
208 Ga0307411_10012344 3300032005 Bacteria 4658
209 Ga0307415_100024493 3300032126 Bacteria 3769
210 Ga0316583_10013988 3300032133 Bacteria 2894
211 Ga0316584_0059459 3300036712 Bacteria 2862
212 Ga0316584_0144349 3300036712 Bacteria 1774
213 Ga0451802_2160587 3300041460 Bacteria 956
214 Ga0451853_0325906 3300041512 Bacteria 1074
215 Ga0451853_2908273 3300041512 Bacteria 1508
216 Ga0439462_0001205 3300042015 Bacteria 5652
217 Ga0450898_021639 3300042134 Bacteria 1134
218 Ga0453684_0064389 3300044712 Bacteria 4684
219 Ga0451576_0000007 3300045051 Bacteria 782228
220 Ga0451576_0192542 3300045051 Bacteria 2130
221 Ga0495627_000217 3300046453 Bacteria 62536
222 Ga0495650_0000559 3300046471 Bacteria 52755
223 Ga0495650_0102189 3300046471 Bacteria 1075
224 Ga0495596_0000233 3300046500 Bacteria 37690
225 Ga0495596_0000472 3300046500 Bacteria 25455
226 Ga0495607_0013365 3300046501 Bacteria 5382
227 Ga0495583_0126222 3300046506 Bacteria 1073
228 Ga0495610_0000030 3300046512 Bacteria 265950
229 Ga0495610_0004205 3300046512 Bacteria 10739
230 Ga0495610_0007332 3300046512 Bacteria 7371
231 Ga0495616_0139879 3300046513 Bacteria 1103
232 Ga0495620_0020437 3300046515 Bacteria 3233
233 Ga0495632_0010051 3300046519 Bacteria 5639
234 Ga0495643_0000199 3300046522 Bacteria 93741
235 Ga0495654_0045722 3300046530 Bacteria 2159
236 Ga0495598_0009500 3300046537 Bacteria 2302
237 Ga0495625_0030792 3300046660 Bacteria 3998
238 Ga0495681_0000011 3300047470 Bacteria 201843
239 Ga0495615_0000025 3300048090 Bacteria 49753
240 Ga0495626_0003607 3300048091 Bacteria 9845
241 Ga0496100_0014976 3300048903 Bacteria 4520
242 Ga0496100_0026849 3300048903 Bacteria 3534
243 Ga0496101_0011114 3300048904 Bacteria 5965
244 Ga0496101_0060882 3300048904 Bacteria 2740
245 Ga0496102_0000570 3300048905 Bacteria 39156
246 Ga0496102_0105937 3300048905 Bacteria 2616
247 Ga0496103_0000201 3300048906 Bacteria 59837
248 Ga0496103_0005500 3300048906 Bacteria 7577
249 Ga0496103_0037513 3300048906 Bacteria 2970
250 Ga0496104_0000078 3300048907 Bacteria 100203
251 Ga0496104_0008013 3300048907 Bacteria 9368
252 Ga0496104_0028553 3300048907 Bacteria 5170
253 Ga0496105_0000241 3300048908 Bacteria 36833
254 Ga0496105_0005919 3300048908 Bacteria 9331
255 Ga0496105_0090812 3300048908 Bacteria 2522
256 Ga0496106_0002700 3300048909 Bacteria 13158
257 Ga0496107_0014775 3300048910 Bacteria 5466
258 Ga0496107_0075256 3300048910 Bacteria 2457
259 Ga0496110_0292325 3300048913 Bacteria 1484
260 Ga0496111_0100191 3300048914 Bacteria 2128
261 Ga0496113_0024945 3300048916 Bacteria 4257
262 Ga0496113_0596223 3300048916 Bacteria 885
263 Ga0496114_0010020 3300048917 Bacteria 7535
264 Ga0496116_0000028 3300048919 Bacteria 424086
265 Ga0496116_0037654 3300048919 Bacteria 3370
266 Ga0496117_0003203 3300048920 Bacteria 19356
267 Ga0496117_0027298 3300048920 Bacteria 4451
268 Ga0496117_0065941 3300048920 Bacteria 2458
269 Ga0496117_0066818 3300048920 Bacteria 2436
270 Ga0496118_0016205 3300048921 Bacteria 6847
271 Ga0496118_0016871 3300048921 Bacteria 6673
272 Ga0496118_0149333 3300048921 Bacteria 1465
273 Ga0496119_0000114 3300048922 Bacteria 114495
274 Ga0496119_0123694 3300048922 Bacteria 1418
275 Ga0496120_0000266 3300048923 Bacteria 87412
276 Ga0496121_0000021 3300048924 Bacteria 478544
277 Ga0496121_0000520 3300048924 Bacteria 73411
278 Ga0496121_0002014 3300048924 Bacteria 32249
279 Ga0496121_0009117 3300048924 Bacteria 11483
280 Ga0496121_0015265 3300048924 Bacteria 8068
281 Ga0496121_0123958 3300048924 Bacteria 1946
282 Ga0496122_0005756 3300048925 Bacteria 14594
283 Ga0496122_0005810 3300048925 Bacteria 14503
284 Ga0496123_0000705 3300048926 Bacteria 54647
285 Ga0496123_0009221 3300048926 Bacteria 8921
286 Ga0496123_0047309 3300048926 Bacteria 2908
287 Ga0496124_0003580 3300048927 Bacteria 18883
288 Ga0496124_0040732 3300048927 Bacteria 4016
289 Ga0496124_0040943 3300048927 Bacteria 4002
290 Ga0496124_0074322 3300048927 Bacteria 2809
291 Ga0496124_0147635 3300048927 Bacteria 1849
292 Ga0496124_0207243 3300048927 Bacteria 1486
293 Ga0496124_0361984 3300048927 Bacteria 1022
294 Ga0496125_0044976 3300048928 Bacteria 3723
295 Ga0496125_0056317 3300048928 Bacteria 3193
296 Ga0496125_0210742 3300048928 Bacteria 1262
297 Ga0496125_0215908 3300048928 Bacteria 1241
298 Ga0496126_0000079 3300048929 Bacteria 222463
299 Ga0496126_0000173 3300048929 Bacteria 146490
300 Ga0496126_0005189 3300048929 Bacteria 15051
301 Ga0501047_0144002 3300049581 Bacteria 2261
302 Ga0501044_0013271 3300049823 Bacteria 8919
303 Ga0501044_0073002 3300049823 Bacteria 3488
304 Ga0501044_0083810 3300049823 Bacteria 3223
305 Ga0501044_0345324 3300049823 Bacteria 1409
306 Ga0501044_0370757 3300049823 Bacteria 1348
307 nmdc:mga03683_19101_c1 3300050489 Bacteria 2612
308 nmdc:mga03683_22674_c1 3300050489 Bacteria 2436
309 nmdc:mga03683_4716_c1 3300050489 Bacteria 4546
310 nmdc:mga03n38_1649_c1 3300050490 Bacteria 6538
311 nmdc:mga00v17_1644_c1 3300050491 Bacteria 11664
312 nmdc:mga00v17_66255_c1 3300050491 Bacteria 2230
313 nmdc:mga0k408_165131_c2 3300050493 Bacteria 946
314 nmdc:mga0k408_1951_c1 3300050493 Bacteria 11058
315 nmdc:mga0k408_346980_c1 3300050493 Bacteria 885
316 nmdc:mga06z11_1082_c1 3300050494 Bacteria 9916
317 nmdc:mga07m45_55_c1 3300050496 Bacteria 47453
318 nmdc:mga0sz30_18899_c1 3300050516 Bacteria 2762
319 nmdc:mga0sz30_2912_c1 3300050516 Bacteria 6133
320 Ga0500643_000001 3300053087 Bacteria 1440111
321 Ga0500643_031962 3300053087 Bacteria 1601
322 Ga0500594_0003892 3300053118 Bacteria 3289
323 Ga0500607_000354 3300053121 Bacteria 43487
324 Ga0500607_001592 3300053121 Bacteria 20060
325 Ga0500608_000755 3300053122 Bacteria 11796
326 Ga0500614_003960 3300053123 Bacteria 3161
327 Ga0500618_001172 3300053125 Bacteria 12656
328 Ga0500559_0001553 3300053136 Bacteria 12848
329 Ga0500559_0012071 3300053136 Bacteria 3679
330 Ga0500564_010004 3300053138 Bacteria 4147
331 Ga0500590_006291 3300053148 Bacteria 5777
332 Ga0500616_0000893 3300053153 Bacteria 32769
333 Ga0500622_0000145 3300053156 Bacteria 75417
334 Ga0500637_0006247 3300053178 Bacteria 5850
335 Ga0500567_000039 3300053723 Bacteria 27122
336 Ga0500625_000021 3300053729 Bacteria 83503
337 Ga0500645_010948 3300053730 Bacteria 2980
338 2511125733 2510917021 Bacteria 5705459
339 2643949835 2643221588 Bacteria 3692460
340 2738711559 2738541275 Bacteria 4830863
341 2738849984 2738541301 Bacteria 4834102
342 2738865713 2738541304 Bacteria 4833665
343 2739298231 2738543022 Bacteria 4835059
344 2739359909 2738543033 Bacteria 4833336
345 2739649113 2739367664 Bacteria 4114334
346 2740027586 2739367865 Bacteria 4114482
347 2819553079 2818991438 Bacteria 5793701
348 2882807454 2882806704 Bacteria 3007728
349 2896184357 2896184354 Bacteria 3258548
350 2896254912 2896253425 Bacteria 3418029
351 2919140137 2919138771 Bacteria 5281312
352 2928104177 2928100450 Bacteria 4837635
353 2928961642 2928959182 Bacteria 4725774
354 3000866811 3000865235 Bacteria 3106258
355 8054305884 8054302542 Bacteria 5698134
356 Ga0157380_10113215
357 SwRhRL2b_contig_1373448
358 SwRhRL2b_contig_848841
359 JGI24748J21848_1002134
360 JGI24751J29686_10000080
361 Ga0065704_10000191
362 Ga0065704_10070424
363 Ga0065704_10120565
364 Ga0070658_10007368
365 Ga0070658_10022478
366 Ga0070683_100067064
367 Ga0070670_100065399
368 Ga0070670_100113489
369 Ga0070680_100008906
370 Ga0070660_100002832
371 Ga0070660_100346881
372 Ga0070661_100001999
373 Ga0070661_100138901
374 Ga0070668_100004238
375 Ga0070668_100005956
376 Ga0070668_100041518
377 Ga0070668_100041568
378 Ga0070669_100001258
379 Ga0070669_100003497
380 Ga0070669_100008686
381 Ga0070675_100522688
382 Ga0070671_100000066
383 Ga0070671_100013029
384 Ga0070671_100065701
385 Ga0070671_100175733
386 Ga0070659_100047030
387 Ga0070659_100222886
388 Ga0070667_100001146
389 Ga0070667_100002247
390 Ga0070667_100042623
391 Ga0070667_100088797
392 Ga0070705_100345247
393 Ga0070662_100001119
394 Ga0070662_100013317
395 Ga0070662_100085322
396 Ga0070681_10002647
397 Ga0070679_100006503
398 Ga0070679_100007172
399 Ga0070679_100023213
400 Ga0070679_100133589
401 Ga0068853_100013867
402 Ga0070686_100030216
403 Ga0070665_100000107
404 Ga0070665_100033492
405 Ga0068855_100007587
406 Ga0068855_100031505
407 Ga0068855_100444933
408 Ga0070664_100014622
409 Ga0070664_100047223
410 Ga0068857_100007693
411 Ga0068857_100059797
412 Ga0068857_100327253
413 Ga0068854_100000494
414 Ga0068854_100051577
415 Ga0068852_100219629
416 Ga0068852_100280969
417 Ga0068863_100001802
418 Ga0068863_100012416
419 Ga0068858_100017260
420 Ga0068858_100054975
421 Ga0068858_100080173
422 Ga0068858_100335743
423 Ga0068860_100000008
424 Ga0068860_100012538
425 Ga0068860_100014365
426 Ga0068860_100111197
427 Ga0068860_100271392
428 Ga0068862_100003636
429 Ga0068862_100006131
430 Ga0068862_100021657
431 Ga0075365_10022117
432 Ga0075368_10001554
433 Ga0075364_10009566
434 Ga0075364_10022615
435 Ga0075432_10002185
436 Ga0075362_10027599
437 Ga0075362_10035608
438 Ga0075367_10004752
439 Ga0075369_10004755
440 Ga0075366_10006178
441 Ga0075366_10208425
442 Ga0075370_10015431
443 Ga0075370_10036100
444 Ga0075370_10181729
445 Ga0105251_10005734
446 Ga0105250_10001326
447 Ga0105240_10275534
448 Ga0111539_10396613
449 Ga0105247_10156365
450 Ga0105241_10015087
451 Ga0105248_10022643
452 Ga0105248_10148901
453 Ga0105237_10201892
454 Ga0105249_10135334
455 Ga0105246_10000505
456 Ga0157373_10037661
457 Ga0157373_10040405
458 Ga0157371_10005723
459 Ga0157370_10038512
460 Ga0157370_10265772
461 Ga0157369_10061330
462 Ga0163162_10005623
463 Ga0163162_10039156
464 Ga0157372_10011782
465 Ga0157372_10277971
466 Ga0157375_10207728
467 Ga0157380_10778544
468 Ga0163161_10026424
469 Ga0209050_1000370
470 Ga0207696_1006360
471 Ga0207713_1001941
472 Ga0207680_10070528
473 Ga0207647_10182439
474 Ga0207705_10009457
475 Ga0207705_10053780
476 Ga0207705_10683012
477 Ga0207654_10019536
478 Ga0207707_10171057
479 Ga0207660_10034276
480 Ga0207657_10001019
481 Ga0207657_10094991
482 Ga0207652_10077599
483 Ga0207652_10136356
484 Ga0207652_10421274
485 Ga0207681_10000505
486 Ga0207681_10004768
487 Ga0207681_10016888
488 Ga0207681_10053084
489 Ga0207659_10384502
490 Ga0207644_10000087
491 Ga0207644_10000340
492 Ga0207644_10055117
493 Ga0207644_10176275
494 Ga0207706_10004727
495 Ga0207706_10023370
496 Ga0207706_10068203
497 Ga0207711_10057337
498 Ga0207711_10583966
499 Ga0207661_10012259
500 Ga0207679_10031392
501 Ga0207667_10020525
502 Ga0207667_10033706
503 Ga0207667_10097617
504 Ga0207667_10347930
505 Ga0207668_10002561
506 Ga0207668_10005571
507 Ga0207668_10038117
508 Ga0207640_10001840
509 Ga0207640_10123658
510 Ga0207658_10000342
511 Ga0207658_10001650
512 Ga0207658_10013921
513 Ga0207703_10012009
514 Ga0207703_10069177
515 Ga0207639_10011566
516 Ga0207641_10000102
517 Ga0207641_10005655
518 Ga0207641_10025049
519 Ga0207676_10029973
520 Ga0207674_10044645
521 Ga0207674_10076759
522 Ga0207674_10477801
523 Ga0207698_10221840
524 Ga0209281_1023298
525 Ga0209813_10000064
526 Ga0209974_10012363
527 Ga0268266_10000462
528 Ga0268266_10015885
529 Ga0268265_10028732
530 Ga0268265_10215128
531 Ga0268265_10260849
532 Ga0268265_10348974
533 Ga0268264_10000018
534 Ga0268264_10010046
535 Ga0268264_10019317
536 Ga0268264_10019338
537 Ga0268264_10247128
538 Ga0265331_10020470
539 Ga0265327_10086408
540 Ga0307408_100250374
541 Ga0307508_10260660
542 Ga0316579_10031243
543 Ga0307405_10001359
544 Ga0307405_10006672
545 Ga0307413_10011697
546 Ga0307413_10099671
547 Ga0307413_10151937
548 Ga0307410_10012246
549 Ga0307410_10126246
550 Ga0307406_10059240
551 Ga0307407_10101243
552 Ga0307407_10130147
553 Ga0307412_10007413
554 Ga0307412_10065624
555 Ga0307412_10111887
556 Ga0307412_10243915
557 Ga0307409_100194222
558 Ga0307416_100027446
559 Ga0307416_100889738
560 Ga0307414_10011804
561 Ga0307414_10049507
562 Ga0307414_10427116
563 Ga0307411_10012344
564 Ga0307415_100024493
565 Ga0316583_10013988
566 Ga0316584_0059459
567 Ga0316584_0144349
568 Ga0451802_2160587
569 Ga0451853_0325906
570 Ga0451853_2908273
571 Ga0439462_0001205
572 Ga0450898_021639
573 Ga0453684_0064389
574 Ga0451576_0000007
575 Ga0451576_0192542
576 Ga0495627_000217
577 Ga0495650_0000559
578 Ga0495650_0102189
579 Ga0495596_0000233
580 Ga0495596_0000472
581 Ga0495607_0013365
582 Ga0495583_0126222
583 Ga0495610_0000030
584 Ga0495610_0004205
585 Ga0495610_0007332
586 Ga0495616_0139879
587 Ga0495620_0020437
588 Ga0495632_0010051
589 Ga0495643_0000199
590 Ga0495654_0045722
591 Ga0495598_0009500
592 Ga0495625_0030792
593 Ga0495681_0000011
594 Ga0495615_0000025
595 Ga0495626_0003607
596 Ga0496100_0014976
597 Ga0496100_0026849
598 Ga0496101_0011114
599 Ga0496101_0060882
600 Ga0496102_0000570
601 Ga0496102_0105937
602 Ga0496103_0000201
603 Ga0496103_0005500
604 Ga0496103_0037513
605 Ga0496104_0000078
606 Ga0496104_0008013
607 Ga0496104_0028553
608 Ga0496105_0000241
609 Ga0496105_0005919
610 Ga0496105_0090812
611 Ga0496106_0002700
612 Ga0496107_0014775
613 Ga0496107_0075256
614 Ga0496110_0292325
615 Ga0496111_0100191
616 Ga0496113_0024945
617 Ga0496113_0596223
618 Ga0496114_0010020
619 Ga0496116_0000028
620 Ga0496116_0037654
621 Ga0496117_0003203
622 Ga0496117_0027298
623 Ga0496117_0065941
624 Ga0496117_0066818
625 Ga0496118_0016205
626 Ga0496118_0016871
627 Ga0496118_0149333
628 Ga0496119_0000114
629 Ga0496119_0123694
630 Ga0496120_0000266
631 Ga0496121_0000021
632 Ga0496121_0000520
633 Ga0496121_0002014
634 Ga0496121_0009117
635 Ga0496121_0015265
636 Ga0496121_0123958
637 Ga0496122_0005756
638 Ga0496122_0005810
639 Ga0496123_0000705
640 Ga0496123_0009221
641 Ga0496123_0047309
642 Ga0496124_0003580
643 Ga0496124_0040732
644 Ga0496124_0040943
645 Ga0496124_0074322
646 Ga0496124_0147635
647 Ga0496124_0207243
648 Ga0496124_0361984
649 Ga0496125_0044976
650 Ga0496125_0056317
651 Ga0496125_0210742
652 Ga0496125_0215908
653 Ga0496126_0000079
654 Ga0496126_0000173
655 Ga0496126_0005189
656 Ga0501047_0144002
657 Ga0501044_0013271
658 Ga0501044_0073002
659 Ga0501044_0083810
660 Ga0501044_0345324
661 Ga0501044_0370757
662 nmdc:mga03683_19101_c1
663 nmdc:mga03683_22674_c1
664 nmdc:mga03683_4716_c1
665 nmdc:mga03n38_1649_c1
666 nmdc:mga00v17_1644_c1
667 nmdc:mga00v17_66255_c1
668 nmdc:mga0k408_165131_c2
669 nmdc:mga0k408_1951_c1
670 nmdc:mga0k408_346980_c1
671 nmdc:mga06z11_1082_c1
672 nmdc:mga07m45_55_c1
673 nmdc:mga0sz30_18899_c1
674 nmdc:mga0sz30_2912_c1
675 Ga0500643_000001
676 Ga0500643_031962
677 Ga0500594_0003892
678 Ga0500607_000354
679 Ga0500607_001592
680 Ga0500608_000755
681 Ga0500614_003960
682 Ga0500618_001172
683 Ga0500559_0001553
684 Ga0500559_0012071
685 Ga0500564_010004
686 Ga0500590_006291
687 Ga0500616_0000893
688 Ga0500622_0000145
689 Ga0500637_0006247
690 Ga0500567_000039
691 Ga0500625_000021
692 Ga0500645_010948
693 2511125733
694 2643949835
695 2738711559
696 2738849984
697 2738865713
698 2739298231
699 2739359909
700 2739649113
701 2740027586
702 2819553079
703 2882807454
704 2896184357
705 2896254912
706 2919140137
707 2928104177
708 2928961642
709 3000866811
710 8054305884

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00588

SpoU_methylase

SpoU rRNA Methylase family

117

257

0.95

PF22435

MRM3-like_sub_bind

MRM3-like substrate binding domain

10

100

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5l0z-assembly1.cif.gz_B crystal structure of adomet bound rrna methyltransferase from sinorhizobium meliloti 0.9189 6 267
5kzk-assembly1.cif.gz_B crystal structure of rrna methyltransferase from sinorhizobium meliloti 0.9097 6 267
5l0z-assembly1.cif.gz_B crystal structure of adomet bound rrna methyltransferase from sinorhizobium meliloti 0.8989 6 267
5kzk-assembly1.cif.gz_B crystal structure of rrna methyltransferase from sinorhizobium meliloti 0.8898 6 267
4x3m-assembly1.cif.gz_B crystal structure of ttha0275 from thermus thermophilus (hb8) in complex with adenosine in space group p212121 0.8841 6 264
ID Description Score Start End Superfamily
af_P94978_97_258_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9084 121 267 3.40.1280.10
5l0zB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.901 116 267 3.40.1280.10
5l0zB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8842 116 267 3.40.1280.10
af_C6TCU8_69_240_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8731 116 268 3.40.1280.10
5co4A00 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8671 122 268 3.40.1280.10
ID Description Score Start End GO Terms
AF-A0A0G3XF69-F1-model_v4 RNA methyltransferase 0.9542 6 267 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-T0HD71-F1-model_v4 RNA methyltransferase 0.945 1 268 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A0G3XF69-F1-model_v4 RNA methyltransferase 0.9437 6 267 GO:0003723
GO:0005737
GO:0006396
GO:0008173
GO:0032259
AF-A0A349QG33-F1-model_v4 deleted 0.933 3 249
AF-T0HD71-F1-model_v4 RNA methyltransferase 0.9314 1 268 GO:0003723
GO:0006396
GO:0008173
GO:0032259

Map