F418677

General Info

Members Datasets Scaffolds Average Seq Length
351 228 314 328

Family's Representative Sequence

Representative Sequence 3300030736|Ga0316180_1157287|Ga0316180_11572872
Length 381
Sequence VLGRTRELLPAGSIWAAYRKPHTCRQRQATLTGGMTYGEPARPAARRTRFQASWPSSAAPTMGITIYGCEQDEAVLFREMAPRFGVMPTITEEAVSEVNVELASGNRCVSVGHKNRVANSTLLALSQVGVTYISTRSIGYDHIDVTYAESVGIAVENVSYSPDSVADYTLMLMLMVVRSAKSIIRRTDDHDYRLGDTRGKELRDLTVGVVGTGRIGTAVIGRLRGFGCRILAHDNRPGVVADHVPLDELLRQSDIVTLHTPLTAETHHLLNDQRLAQMKDGAFVINTGRGPLLDTEALISALESGRLGGAALDVLEGEEGIFYADCRDRPIGCKPLLRLQNLPNVIVSPHTAYYTDHALSDTVENSLINCLSFASERRHWI

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
3 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
4 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
5 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
6 2643221619 Agromyces sp. Root81 Isolate Unclassified
7 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
8 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
9 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
10 2687453737 Frankia sp. BMG5.36 Isolate Nodule
11 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
12 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
13 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
14 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
15 2808606448 Streptomyces sp. 193411 Isolate Unclassified
16 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
17 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
18 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
19 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
20 2867428634 Streptomyces sp. RP5T Isolate Unclassified
21 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
22 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
23 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
24 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
25 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
26 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
27 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
28 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
29 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
30 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
31 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
32 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
33 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
34 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
35 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
36 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
38 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
39 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
40 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
41 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
42 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
43 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
44 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
45 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
46 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
47 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
48 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
49 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
50 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
51 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
52 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
53 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
54 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
55 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
56 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
57 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
58 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
59 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
60 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
61 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
62 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
63 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
64 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
65 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
66 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
116 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
117 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
118 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
119 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
120 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
121 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
122 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
123 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
124 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
128 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
129 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
130 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
131 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
132 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
133 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
137 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
141 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
142 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
143 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
144 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
145 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
146 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
147 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
148 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
149 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
150 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
151 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
152 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
153 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
154 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
155 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
156 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
157 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
158 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
159 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
160 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
161 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
162 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
163 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
164 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
165 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
166 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
167 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
168 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
169 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
170 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
171 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
172 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
173 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
174 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
175 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
176 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
177 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
178 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
179 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
180 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
181 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
182 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
183 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
184 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
185 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
186 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
187 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
188 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
196 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
197 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
198 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
199 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
200 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
201 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
202 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
203 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
204 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
206 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
207 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
208 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
209 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
210 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
211 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
212 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
213 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
214 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
215 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
216 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
217 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
218 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
219 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
220 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
221 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
222 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
223 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
224 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
225 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
226 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
227 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
228 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.46
Metatranscriptomes 0
Isolates 10.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.69
Nodule 0.57
Rhizoplane 1.42
Rhizosphere 73.5
Stem 0
Stem Tuber 0
Unclassified 14.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1005696 3300001915 Bacteria 2572
2 JGI24737J22298_10000004 3300001990 Bacteria 66533
3 JGI24735J21928_10000992 3300002067 Bacteria 10154
4 JGI25406J46586_10001206 3300003203 Bacteria 12153
5 JGI25406J46586_10004237 3300003203 Bacteria 6700
6 JGI25406J46586_10006011 3300003203 Bacteria 5613
7 rootL2_10026938 3300003322 Bacteria 5857
8 rootL2_10058684 3300003322 Bacteria 1272
9 rootL2_10102887 3300003322 Bacteria 3046
10 rootH1_10000556 3300003323 Bacteria 35732
11 rootH1_10126038 3300003323 Bacteria 4433
12 Ga0070687_100141200 3300005343 Bacteria 1403
13 Ga0070668_100000148 3300005347 Bacteria 44430
14 Ga0070668_100013144 3300005347 Bacteria 6172
15 Ga0070667_100010675 3300005367 Bacteria 7588
16 Ga0070667_100167535 3300005367 Bacteria 1938
17 Ga0070714_100004894 3300005435 Bacteria 10168
18 Ga0070714_100021715 3300005435 Bacteria 5253
19 Ga0070714_100039496 3300005435 Bacteria 3974
20 Ga0070714_100194519 3300005435 Bacteria 1853
21 Ga0070713_100032537 3300005436 Bacteria 4166
22 Ga0070713_100074437 3300005436 Bacteria 2877
23 Ga0070713_100108787 3300005436 Bacteria 2414
24 Ga0070710_10002048 3300005437 Bacteria 9547
25 Ga0070708_100099852 3300005445 Bacteria 2656
26 Ga0070663_100016273 3300005455 Bacteria 4824
27 Ga0070706_100009642 3300005467 Bacteria 8977
28 Ga0070707_100022332 3300005468 Bacteria 5981
29 Ga0070707_100414892 3300005468 Bacteria 1307
30 Ga0070698_100114073 3300005471 Bacteria 2667
31 Ga0070684_100001804 3300005535 Bacteria 15667
32 Ga0070684_100075856 3300005535 Bacteria 2966
33 Ga0070665_100000151 3300005548 Bacteria 127579
34 Ga0068856_100017747 3300005614 Bacteria 6901
35 Ga0068852_100279352 3300005616 Bacteria 1609
36 Ga0068859_100006971 3300005617 Bacteria 11471
37 Ga0068851_10109934 3300005834 Bacteria 1470
38 Ga0068858_100000209 3300005842 Bacteria 63108
39 Ga0068860_100000669 3300005843 Bacteria 39653
40 Ga0068862_100000009 3300005844 Bacteria 298620
41 Ga0068862_100002003 3300005844 Bacteria 18475
42 Ga0081455_10008058 3300005937 Bacteria 11004
43 Ga0081455_10027009 3300005937 Bacteria 5267
44 Ga0081455_10036341 3300005937 Bacteria 4387
45 Ga0081539_10000241 3300005985 Bacteria 128623
46 Ga0081539_10000683 3300005985 Bacteria 67952
47 Ga0081539_10003166 3300005985 Bacteria 20857
48 Ga0081539_10004602 3300005985 Bacteria 15054
49 Ga0081539_10023515 3300005985 Bacteria 4035
50 Ga0075365_10011780 3300006038 Bacteria 5159
51 Ga0075365_10024747 3300006038 Bacteria 3793
52 Ga0075365_10047537 3300006038 Bacteria 2821
53 Ga0075365_10078327 3300006038 Bacteria 2234
54 Ga0075365_10105906 3300006038 Bacteria 1929
55 Ga0075365_10174858 3300006038 Bacteria 1499
56 Ga0075368_10001237 3300006042 Bacteria 8070
57 Ga0075368_10050390 3300006042 Bacteria 1654
58 Ga0075363_100005322 3300006048 Bacteria 5712
59 Ga0075363_100028699 3300006048 Bacteria 2865
60 Ga0075364_10011797 3300006051 Bacteria 5319
61 Ga0075367_10018094 3300006178 Bacteria 3881
62 Ga0075370_10005476 3300006353 Bacteria 6318
63 Ga0075370_10123504 3300006353 Bacteria 1508
64 Ga0097620_100006971 3300006931 Bacteria 11471
65 Ga0105240_10001713 3300009093 Bacteria 37016
66 Ga0105240_10003316 3300009093 Bacteria 25157
67 Ga0105240_10272886 3300009093 Bacteria 1946
68 Ga0105245_10346620 3300009098 Bacteria 1470
69 Ga0105243_10036313 3300009148 Bacteria 3825
70 Ga0105238_10182466 3300009551 Bacteria 2075
71 Ga0105249_10001184 3300009553 Bacteria 23107
72 Ga0105249_10012674 3300009553 Bacteria 7436
73 Ga0105033_100025 3300009986 Bacteria 11683
74 Ga0105239_10047649 3300010375 Bacteria 4697
75 Ga0105239_10307623 3300010375 Bacteria 1786
76 Ga0105246_10042190 3300011119 Bacteria 3089
77 Ga0105246_10323628 3300011119 Bacteria 1254
78 Ga0157373_10000061 3300013100 Bacteria 95718
79 Ga0157369_10007290 3300013105 Bacteria 12730
80 Ga0157369_10034052 3300013105 Bacteria 5594
81 Ga0157369_10113229 3300013105 Bacteria 2882
82 Ga0163163_10017117 3300014325 Bacteria 6752
83 Ga0163163_10052820 3300014325 Bacteria 4011
84 Ga0157379_10000516 3300014968 Bacteria 31318
85 Ga0157379_10000611 3300014968 Bacteria 28845
86 Ga0157379_10052137 3300014968 Bacteria 3654
87 Ga0183367_1012 3300015688 Bacteria 347438
88 Ga0163161_10040307 3300017792 Bacteria 3354
89 Ga0213876_10158410 3300021384 Bacteria 1204
90 Ga0207692_10003334 3300025898 Bacteria 6260
91 Ga0207692_10125809 3300025898 Bacteria 1441
92 Ga0207710_10000108 3300025900 Bacteria 105251
93 Ga0207647_10020899 3300025904 Bacteria 4380
94 Ga0207699_10008140 3300025906 Bacteria 5160
95 Ga0207684_10007853 3300025910 Bacteria 9542
96 Ga0207695_10000202 3300025913 Bacteria 164457
97 Ga0207695_10006661 3300025913 Bacteria 14906
98 Ga0207693_10021400 3300025915 Bacteria 5140
99 Ga0207657_10228916 3300025919 Bacteria 1487
100 Ga0207646_10025485 3300025922 Bacteria 5410
101 Ga0207694_10156332 3300025924 Bacteria 1839
102 Ga0207687_10262119 3300025927 Bacteria 1378
103 Ga0207700_10023074 3300025928 Bacteria 4283
104 Ga0207700_10024024 3300025928 Bacteria 4214
105 Ga0207700_10058262 3300025928 Bacteria 2917
106 Ga0207700_10091485 3300025928 Bacteria 2403
107 Ga0207664_10016642 3300025929 Bacteria 5370
108 Ga0207664_10022890 3300025929 Bacteria 4674
109 Ga0207664_10092596 3300025929 Bacteria 2481
110 Ga0207665_10004080 3300025939 Bacteria 9755
111 Ga0207711_10000170 3300025941 Bacteria 70147
112 Ga0207661_10384130 3300025944 Bacteria 1271
113 Ga0207679_10014308 3300025945 Bacteria 5213
114 Ga0207712_10004245 3300025961 Bacteria 9039
115 Ga0207712_10005249 3300025961 Bacteria 8194
116 Ga0207668_10001685 3300025972 Bacteria 12921
117 Ga0207668_10103578 3300025972 Bacteria 2119
118 Ga0207658_10014036 3300025986 Bacteria 5482
119 Ga0207703_10000235 3300026035 Bacteria 63296
120 Ga0207678_10000793 3300026067 Bacteria 28952
121 Ga0207702_10013024 3300026078 Bacteria 6916
122 Ga0207641_10121154 3300026088 Bacteria 2335
123 Ga0207683_10151182 3300026121 Bacteria 2095
124 Ga0207698_10251369 3300026142 Bacteria 1618
125 Ga0209371_1023292 3300027312 Bacteria 1460
126 Ga0268266_10009215 3300028379 Bacteria 8709
127 Ga0268265_10000173 3300028380 Bacteria 77372
128 Ga0268265_10001377 3300028380 Bacteria 20603
129 Ga0268264_10000510 3300028381 Bacteria 50047
130 Ga0268264_10022742 3300028381 Bacteria 5116
131 Ga0268264_10060656 3300028381 Bacteria 3171
132 Ga0307517_10163772 3300028786 Bacteria 1484
133 Ga0307515_10099510 3300028794 Bacteria 3529
134 Ga0268256_1026263 3300030500 Bacteria 1466
135 Ga0307512_10003295 3300030522 Bacteria 18993
136 Ga0307512_10134527 3300030522 Bacteria 1537
137 Ga0316177_1181354 3300030731 Bacteria 5953
138 Ga0314311_1102152 3300030733 Bacteria 3831
139 Ga0314311_1168537 3300030733 Bacteria 1863
140 Ga0316180_1157287 3300030736 Bacteria 1879
141 Ga0307513_10000003 3300031456 Bacteria 590921
142 Ga0307509_10083433 3300031507 Bacteria 3294
143 Ga0307509_10153483 3300031507 Bacteria 2213
144 Ga0307508_10000982 3300031616 Bacteria 33131
145 Ga0307508_10012476 3300031616 Bacteria 7767
146 Ga0307516_10001068 3300031730 Bacteria 38188
147 Ga0307516_10026282 3300031730 Bacteria 5913
148 Ga0307409_100228586 3300031995 Bacteria 1685
149 Ga0307416_100216131 3300032002 Bacteria 1834
150 Ga0307415_100039145 3300032126 Bacteria 3131
151 Ga0307415_100053340 3300032126 Bacteria 2754
152 Ga0307415_100085051 3300032126 Bacteria 2271
153 Ga0307507_10000084 3300033179 Bacteria 145642
154 Ga0307507_10028565 3300033179 Bacteria 5941
155 Ga0307507_10056672 3300033179 Bacteria 3700
156 Ga0373940_0013244 3300035088 Bacteria 1990
157 Ga0373941_0026606 3300035115 Bacteria 1681
158 Ga0373943_0219118 3300035170 Bacteria 1059
159 Ga0373942_0000961 3300035207 Bacteria 7850
160 Ga0373931_0017791 3300035691 Bacteria 3522
161 Ga0373937_0133543 3300036401 Bacteria 2319
162 Ga0373925_0037058 3300037068 Bacteria 3598
163 Ga0395899_0015687 3300037312 Bacteria 5777
164 Ga0395899_0033195 3300037312 Bacteria 3877
165 Ga0395900_0001084 3300037418 Bacteria 34636
166 Ga0395900_0029358 3300037418 Bacteria 5642
167 Ga0395900_0181458 3300037418 Bacteria 2139
168 Ga0395898_0000270 3300037466 Bacteria 127152
169 Ga0395898_0013280 3300037466 Bacteria 8482
170 Ga0395898_0041470 3300037466 Bacteria 4546
171 Ga0395898_0076734 3300037466 Bacteria 3226
172 Ga0395898_0077381 3300037466 Bacteria 3212
173 Ga0395898_0104455 3300037466 Bacteria 2717
174 Ga0395905_0043052 3300037471 Bacteria 4236
175 Ga0395905_0291950 3300037471 Bacteria 1517
176 Ga0395901_0026498 3300038443 Bacteria 5952
177 Ga0395901_0071272 3300038443 Bacteria 3621
178 Ga0395901_0555256 3300038443 Bacteria 1163
179 Ga0436365_0158524 3300039437 Bacteria 1206
180 Ga0439436_0016647 3300041404 Bacteria 2204
181 Ga0439438_008506 3300041405 Bacteria 3395
182 Ga0451791_0795522 3300041451 Bacteria 5652
183 Ga0451853_0315918 3300041512 Bacteria 1336
184 Ga0439448_0040192 3300042005 Bacteria 1510
185 Ga0439449_0005581 3300042007 Bacteria 4815
186 Ga0439455_0022015 3300042012 Bacteria 1524
187 Ga0439457_000972 3300042014 Bacteria 8625
188 Ga0450903_003928 3300042138 Bacteria 2554
189 Ga0439458_0001072 3300042157 Bacteria 6971
190 Ga0466969_0011531 3300044656 Bacteria 4678
191 Ga0466969_0021095 3300044656 Bacteria 3371
192 Ga0466969_0042339 3300044656 Bacteria 2274
193 Ga0466972_0001194 3300044658 Bacteria 12489
194 Ga0466972_0004812 3300044658 Bacteria 6769
195 Ga0466972_0066086 3300044658 Bacteria 1729
196 Ga0466965_0005479 3300044683 Bacteria 5723
197 Ga0466966_0021225 3300044684 Bacteria 4265
198 Ga0466966_0048782 3300044684 Bacteria 2697
199 Ga0466961_0030751 3300044693 Bacteria 3450
200 Ga0466961_0052741 3300044693 Bacteria 2596
201 Ga0466963_0004911 3300044694 Bacteria 7796
202 Ga0466963_0079840 3300044694 Bacteria 2214
203 Ga0466963_0129494 3300044694 Bacteria 1742
204 Ga0466963_0148800 3300044694 Bacteria 1625
205 Ga0466971_0050039 3300044719 Bacteria 1880
206 Ga0466968_0027569 3300044735 Bacteria 2338
207 Ga0466970_0025334 3300044765 Bacteria 3106
208 Ga0466957_0058339 3300044842 Bacteria 2365
209 Ga0466960_0000185 3300044901 Bacteria 21348
210 Ga0466960_0010693 3300044901 Bacteria 3817
211 Ga0466960_0020297 3300044901 Bacteria 2941
212 Ga0466960_0038297 3300044901 Bacteria 2253
213 Ga0466959_0016731 3300045049 Bacteria 5365
214 Ga0466959_0042720 3300045049 Bacteria 3343
215 Ga0466959_0066949 3300045049 Bacteria 2605
216 Ga0466958_0055521 3300045836 Bacteria 2404
217 Ga0466967_0001962 3300045976 Bacteria 12456
218 Ga0466967_0037028 3300045976 Bacteria 4171
219 Ga0466967_0365475 3300045976 Bacteria 1399
220 Ga0495651_0002434 3300046462 Bacteria 14367
221 Ga0495653_0070071 3300046463 Bacteria 2625
222 Ga0495648_0041293 3300046524 Bacteria 2915
223 Ga0495587_0022843 3300046536 Bacteria 3848
224 Ga0495667_0010730 3300046559 Bacteria 6196
225 Ga0495657_0027223 3300046675 Bacteria 4037
226 Ga0495623_0024571 3300046679 Bacteria 3881
227 Ga0495624_0182049 3300046690 Bacteria 1280
228 Ga0495604_0122152 3300047317 Bacteria 1884
229 Ga0495680_0008903 3300047322 Bacteria 9075
230 Ga0495686_0049904 3300047472 Bacteria 2631
231 Ga0495602_0054590 3300048088 Bacteria 3526
232 Ga0496104_0042446 3300048907 Bacteria 4268
233 Ga0496109_0272538 3300048912 Bacteria 1595
234 Ga0496109_0393062 3300048912 Bacteria 1310
235 Ga0496115_0055010 3300048918 Bacteria 3196
236 Ga0496117_0007221 3300048920 Bacteria 10941
237 Ga0496118_0004415 3300048921 Bacteria 16691
238 Ga0496118_0187391 3300048921 Bacteria 1242
239 Ga0496119_0007394 3300048922 Bacteria 9908
240 Ga0496119_0092192 3300048922 Bacteria 1719
241 Ga0496120_0002604 3300048923 Bacteria 17899
242 Ga0496121_0000098 3300048924 Bacteria 200516
243 Ga0496121_0005613 3300048924 Bacteria 15999
244 Ga0496121_0009141 3300048924 Bacteria 11462
245 Ga0496121_0068679 3300048924 Bacteria 2865
246 Ga0496125_0060440 3300048928 Bacteria 3045
247 Ga0496126_0000007 3300048929 Bacteria 787364
248 Ga0496126_0158331 3300048929 Bacteria 1936
249 Ga0501033_0001996 3300049570 Bacteria 17786
250 Ga0501033_0094165 3300049570 Bacteria 2190
251 Ga0501034_0236594 3300049571 Bacteria 1774
252 Ga0501034_0252997 3300049571 Bacteria 1706
253 Ga0501034_0261681 3300049571 Bacteria 1672
254 Ga0501034_0424395 3300049571 Bacteria 1250
255 Ga0501037_0016188 3300049573 Bacteria 5487
256 Ga0501038_0005563 3300049574 Bacteria 11700
257 Ga0501038_0041378 3300049574 Bacteria 4018
258 Ga0501038_0057815 3300049574 Bacteria 3328
259 Ga0501039_0330217 3300049575 Bacteria 1198
260 Ga0501043_0120985 3300049579 Bacteria 2053
261 Ga0501046_0000071 3300049580 Bacteria 107260
262 Ga0501046_0012276 3300049580 Bacteria 7300
263 Ga0501046_0014386 3300049580 Bacteria 6680
264 Ga0501046_0252419 3300049580 Bacteria 1298
265 Ga0501047_0007336 3300049581 Bacteria 10369
266 Ga0501047_0075781 3300049581 Bacteria 3237
267 Ga0501048_0086766 3300049582 Bacteria 2207
268 Ga0501070_0000013 3300049586 Bacteria 180554
269 Ga0501070_0041988 3300049586 Bacteria 3808
270 Ga0501070_0176361 3300049586 Bacteria 1759
271 Ga0501071_0084199 3300049587 Bacteria 2330
272 Ga0501072_0000923 3300049588 Bacteria 21589
273 Ga0501073_0003311 3300049589 Bacteria 12110
274 Ga0501073_0024210 3300049589 Bacteria 4359
275 Ga0501074_0044973 3300049590 Bacteria 3195
276 Ga0501074_0153623 3300049590 Bacteria 1645
277 Ga0501079_0021162 3300049741 Bacteria 4973
278 Ga0501079_0051129 3300049741 Bacteria 3190
279 Ga0501080_0029263 3300049742 Bacteria 5127
280 Ga0501080_0038775 3300049742 Bacteria 4447
281 Ga0501083_0000481 3300049744 Bacteria 25560
282 Ga0501083_0114128 3300049744 Bacteria 1774
283 Ga0501035_0020540 3300049822 Bacteria 6065
284 Ga0501035_0077317 3300049822 Bacteria 2941
285 Ga0501044_0020035 3300049823 Bacteria 7142
286 Ga0501044_0066895 3300049823 Bacteria 3662
287 Ga0501044_0106320 3300049823 Bacteria 2818
288 Ga0501044_0239142 3300049823 Bacteria 1760
289 Ga0501044_0485811 3300049823 Bacteria 1137
290 nmdc:mga03n38_16979_c1 3300050490 Bacteria 2842
291 nmdc:mga03n38_57827_c1 3300050490 Bacteria 1755
292 nmdc:mga00v17_287246_c1 3300050491 Bacteria 1068
293 nmdc:mga00v17_39398_c1 3300050491 Bacteria 2830
294 nmdc:mga0yw44_106404_c1 3300050492 Bacteria 1793
295 nmdc:mga06z11_109004_c1 3300050494 Bacteria 1531
296 nmdc:mga06z11_124082_c1 3300050494 Bacteria 1444
297 nmdc:mga07m45_19013_c1 3300050496 Bacteria 3717
298 nmdc:mga07m45_4678_c1 3300050496 Bacteria 6718
299 nmdc:mga07m45_6851_c1 3300050496 Bacteria 5793
300 Ga0495655_0002635 3300053083 Bacteria 2876
301 Ga0495595_0023554 3300053084 Bacteria 2712
302 Ga0495619_0139195 3300053085 Bacteria 1670
303 Ga0500643_018909 3300053087 Bacteria 2278
304 Ga0500644_0000054 3300053088 Bacteria 69110
305 Ga0500566_0000202 3300053094 Bacteria 31275
306 Ga0500555_000002 3300053103 Bacteria 1314346
307 Ga0500555_000005 3300053103 Bacteria 342334
308 Ga0500652_004651 3300053131 Bacteria 4267
309 Ga0500568_0000502 3300053139 Bacteria 28764
310 Ga0500579_072499 3300053143 Bacteria 1978
311 Ga0500604_0008760 3300053151 Bacteria 2688
312 Ga0500616_0016797 3300053153 Bacteria 4159
313 Ga0466962_0028008 3300061719 Bacteria 2701
314 Ga0466962_0090340 3300061719 Bacteria 1467

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025928 Ga0207700_10058262 Ga0207700_100582622 285
2 3300035691 Ga0373931_0017791 Ga0373931_0017791_554_1594 291
3 3300036401 Ga0373937_0133543 Ga0373937_0133543_697_1761 295
4 3300046536 Ga0495587_0022843 Ga0495587_0022843_1324_2388 295
5 3300046559 Ga0495667_0010730 Ga0495667_0010730_2374_3438 295
6 3300046675 Ga0495657_0027223 Ga0495657_0027223_614_1678 295
7 3300046679 Ga0495623_0024571 Ga0495623_0024571_1607_2671 295
8 3300047317 Ga0495604_0122152 Ga0495604_0122152_611_1675 295
9 3300047322 Ga0495680_0008903 Ga0495680_0008903_3404_4468 295
10 3300048088 Ga0495602_0054590 Ga0495602_0054590_1941_3005 295
11 3300053084 Ga0495595_0023554 Ga0495595_0023554_824_1888 295
12 3300053085 Ga0495619_0139195 Ga0495619_0139195_405_1469 295
13 3300044658 Ga0466972_0001194 Ga0466972_0001194_11248_12243 296
14 3300044683 Ga0466965_0005479 Ga0466965_0005479_2383_3378 296
15 3300044735 Ga0466968_0027569 Ga0466968_0027569_476_1471 296
16 3300044901 Ga0466960_0038297 Ga0466960_0038297_849_1844 296
17 3300046463 Ga0495653_0070071 Ga0495653_0070071_1003_2067 296
18 3300049571 Ga0501034_0424395 Ga0501034_0424395_146_1156 296
19 3300049574 Ga0501038_0005563 Ga0501038_0005563_9683_10693 296
20 3300049581 Ga0501047_0007336 Ga0501047_0007336_8662_9681 296
21 3300049742 Ga0501080_0038775 Ga0501080_0038775_601_1620 296
22 3300049822 Ga0501035_0077317 Ga0501035_0077317_1721_2731 296
23 3300049823 Ga0501044_0020035 Ga0501044_0020035_1821_2840 296
24 3300049823 Ga0501044_0106320 Ga0501044_0106320_1027_2037 296
25 3300005436 Ga0070713_100032537 Ga0070713_1000325373 298
26 3300025928 Ga0207700_10023074 Ga0207700_100230743 298
27 3300025929 Ga0207664_10016642 Ga0207664_100166426 298
28 3300005435 Ga0070714_100004894 Ga0070714_1000048944 299
29 3300005436 Ga0070713_100074437 Ga0070713_1000744372 302
30 3300003203 JGI25406J46586_10001206 JGI25406J46586_100012065 304
31 3300005937 Ga0081455_10036341 Ga0081455_100363411 304
32 3300005985 Ga0081539_10000683 Ga0081539_1000068357 304
33 3300006042 Ga0075368_10001237 Ga0075368_100012374 304
34 3300006048 Ga0075363_100005322 Ga0075363_1000053225 304
35 3300006178 Ga0075367_10018094 Ga0075367_100180943 304
36 3300006353 Ga0075370_10005476 Ga0075370_100054764 304
37 3300025898 Ga0207692_10125809 Ga0207692_101258091 304
38 3300025906 Ga0207699_10008140 Ga0207699_100081406 304
39 3300025915 Ga0207693_10021400 Ga0207693_100214004 304
40 3300033179 Ga0307507_10056672 Ga0307507_100566721 304
41 3300037068 Ga0373925_0037058 Ga0373925_0037058_2281_3198 304
42 3300050490 nmdc:mga03n38_57827_c1 nmdc:mga03n38_57827_c1_323_1240 304
43 3300050494 nmdc:mga06z11_124082_c1 nmdc:mga06z11_124082_c1_100_1017 304
44 3300003203 JGI25406J46586_10006011 JGI25406J46586_100060116 310
45 3300005985 Ga0081539_10000241 Ga0081539_1000024157 310
46 3300010375 Ga0105239_10047649 Ga0105239_100476494 310
47 iso_pu_bacteria 2558860112 2558909710 312
48 iso_pu_bacteria 2751185782 2753269574 312
49 3300048922 Ga0496119_0092192 Ga0496119_0092192_434_1390 313
50 3300048923 Ga0496120_0002604 Ga0496120_0002604_2848_3804 313
51 3300048924 Ga0496121_0009141 Ga0496121_0009141_10391_11401 313
52 3300053094 Ga0500566_0000202 Ga0500566_0000202_24947_25906 313
53 3300005535 Ga0070684_100075856 Ga0070684_1000758562 314
54 3300006038 Ga0075365_10078327 Ga0075365_100783272 314
55 3300006048 Ga0075363_100028699 Ga0075363_1000286992 314
56 3300025944 Ga0207661_10384130 Ga0207661_103841302 314
57 3300049574 Ga0501038_0057815 Ga0501038_0057815_1259_2203 314
58 3300049575 Ga0501039_0330217 Ga0501039_0330217_89_1033 314
59 3300049580 Ga0501046_0014386 Ga0501046_0014386_1930_2874 314
60 3300049823 Ga0501044_0066895 Ga0501044_0066895_89_1033 314
61 3300049823 Ga0501044_0485811 Ga0501044_0485811_85_1029 314
62 3300050492 nmdc:mga0yw44_106404_c1 nmdc:mga0yw44_106404_c1_664_1614 314
63 iso_pu_bacteria 2582581313 2585302942 314
64 iso_pu_bacteria 2643221619 2644110667 314
65 iso_pu_bacteria 2687453737 2689958216 314
66 iso_pu_bacteria 2867428634 2867429662 314
67 3300005367 Ga0070667_100167535 Ga0070667_1001675351 315
68 3300013105 Ga0157369_10113229 Ga0157369_101132292 315
69 3300025904 Ga0207647_10020899 Ga0207647_100208994 315
70 3300049580 Ga0501046_0000071 Ga0501046_0000071_25364_26314 315
71 3300003323 rootH1_10126038 rootH1_101260382 316
72 3300025919 Ga0207657_10228916 Ga0207657_102289162 316
73 3300030522 Ga0307512_10003295 Ga0307512_100032957 316
74 3300033179 Ga0307507_10028565 Ga0307507_100285655 316
75 3300044656 Ga0466969_0011531 Ga0466969_0011531_1831_2790 316
76 3300044658 Ga0466972_0066086 Ga0466972_0066086_177_1187 316
77 3300044684 Ga0466966_0048782 Ga0466966_0048782_700_1659 316
78 3300044719 Ga0466971_0050039 Ga0466971_0050039_744_1703 316
79 3300044901 Ga0466960_0020297 Ga0466960_0020297_569_1579 316
80 3300045049 Ga0466959_0016731 Ga0466959_0016731_326_1285 316
81 3300049570 Ga0501033_0001996 Ga0501033_0001996_2113_3066 316
82 3300049571 Ga0501034_0252997 Ga0501034_0252997_356_1309 316
83 3300049579 Ga0501043_0120985 Ga0501043_0120985_138_1091 316
84 3300053087 Ga0500643_018909 Ga0500643_018909_985_1953 316
85 3300053103 Ga0500555_000002 Ga0500555_000002_655843_656811 316
86 3300053131 Ga0500652_004651 Ga0500652_004651_1562_2530 316
87 iso_pu_bacteria 2862281513 2862287515 316
88 3300001990 JGI24737J22298_10000004 JGI24737J22298_1000000461 317
89 3300002067 JGI24735J21928_10000992 JGI24735J21928_100009929 317
90 3300003322 rootL2_10102887 rootL2_101028872 317
91 3300005842 Ga0068858_100000209 Ga0068858_1000002099 317
92 3300013105 Ga0157369_10007290 Ga0157369_100072906 317
93 3300015688 Ga0183367_1012 Ga0183367_1012275 317
94 3300025900 Ga0207710_10000108 Ga0207710_1000010853 317
95 3300026035 Ga0207703_10000235 Ga0207703_1000023546 317
96 3300027312 Ga0209371_1023292 Ga0209371_10232922 317
97 3300030500 Ga0268256_1026263 Ga0268256_10262632 317
98 3300046690 Ga0495624_0182049 Ga0495624_0182049_110_1096 317
99 3300047472 Ga0495686_0049904 Ga0495686_0049904_1199_2188 317
100 3300049580 Ga0501046_0252419 Ga0501046_0252419_203_1213 317
101 3300049581 Ga0501047_0075781 Ga0501047_0075781_1551_2561 317
102 3300049823 Ga0501044_0239142 Ga0501044_0239142_77_1087 317
103 3300050496 nmdc:mga07m45_19013_c1 nmdc:mga07m45_19013_c1_2202_3188 317
104 iso_pu_bacteria 2758568621 2760622425 317
105 iso_pu_bacteria 8003314358 8003318138 317
106 3300003322 rootL2_10058684 rootL2_100586842 318
107 3300005437 Ga0070710_10002048 Ga0070710_1000204811 318
108 3300005467 Ga0070706_100009642 Ga0070706_1000096423 318
109 3300005468 Ga0070707_100414892 Ga0070707_1004148921 318
110 3300005471 Ga0070698_100114073 Ga0070698_1001140732 318
111 3300005617 Ga0068859_100006971 Ga0068859_1000069715 318
112 3300005834 Ga0068851_10109934 Ga0068851_101099342 318
113 3300005844 Ga0068862_100000009 Ga0068862_100000009211 318
114 3300006931 Ga0097620_100006971 Ga0097620_1000069717 318
115 3300009093 Ga0105240_10001713 Ga0105240_1000171339 318
116 3300009553 Ga0105249_10001184 Ga0105249_100011848 318
117 3300009553 Ga0105249_10012674 Ga0105249_100126744 318
118 3300013105 Ga0157369_10034052 Ga0157369_100340523 318
119 3300025898 Ga0207692_10003334 Ga0207692_100033345 318
120 3300025910 Ga0207684_10007853 Ga0207684_100078534 318
121 3300025913 Ga0207695_10000202 Ga0207695_10000202181 318
122 3300025961 Ga0207712_10004245 Ga0207712_100042452 318
123 3300028380 Ga0268265_10000173 Ga0268265_1000017370 318
124 3300030522 Ga0307512_10134527 Ga0307512_101345272 318
125 3300030733 Ga0314311_1168537 Ga0314311_11685372 318
126 3300031616 Ga0307508_10012476 Ga0307508_100124763 318
127 3300031995 Ga0307409_100228586 Ga0307409_1002285862 318
128 3300032002 Ga0307416_100216131 Ga0307416_1002161312 318
129 3300032126 Ga0307415_100053340 Ga0307415_1000533403 318
130 3300032126 Ga0307415_100085051 Ga0307415_1000850511 318
131 3300033179 Ga0307507_10000084 Ga0307507_10000084108 318
132 3300035170 Ga0373943_0219118 Ga0373943_0219118_42_1007 318
133 3300037418 Ga0395900_0029358 Ga0395900_0029358_951_1910 318
134 3300037418 Ga0395900_0181458 Ga0395900_0181458_546_1505 318
135 3300037466 Ga0395898_0041470 Ga0395898_0041470_3070_4029 318
136 3300037466 Ga0395898_0104455 Ga0395898_0104455_968_1927 318
137 3300038443 Ga0395901_0555256 Ga0395901_0555256_74_1033 318
138 3300041451 Ga0451791_0795522 Ga0451791_0795522_733_1692 318
139 3300044656 Ga0466969_0042339 Ga0466969_0042339_492_1451 318
140 3300044684 Ga0466966_0021225 Ga0466966_0021225_349_1308 318
141 3300044693 Ga0466961_0030751 Ga0466961_0030751_67_1059 318
142 3300044693 Ga0466961_0052741 Ga0466961_0052741_358_1332 318
143 3300044694 Ga0466963_0148800 Ga0466963_0148800_189_1148 318
144 3300045049 Ga0466959_0042720 Ga0466959_0042720_688_1647 318
145 3300045049 Ga0466959_0066949 Ga0466959_0066949_1597_2589 318
146 3300046524 Ga0495648_0041293 Ga0495648_0041293_1213_2172 318
147 3300048924 Ga0496121_0000098 Ga0496121_0000098_186236_187267 318
148 3300049571 Ga0501034_0236594 Ga0501034_0236594_390_1391 318
149 3300050496 nmdc:mga07m45_6851_c1 nmdc:mga07m45_6851_c1_2353_3360 318
150 3300053083 Ga0495655_0002635 Ga0495655_0002635_1696_2655 318
151 3300053153 Ga0500616_0016797 Ga0500616_0016797_1795_2754 318
152 3300061719 Ga0466962_0028008 Ga0466962_0028008_770_1762 318
153 iso_pu_bacteria 2593339198 2595315151 318
154 iso_pu_bacteria 2954380949 2954382194 318
155 3300003322 rootL2_10026938 rootL2_100269382 319
156 3300005435 Ga0070714_100194519 Ga0070714_1001945192 319
157 3300005455 Ga0070663_100016273 Ga0070663_1000162734 319
158 3300005535 Ga0070684_100001804 Ga0070684_10000180416 319
159 3300005614 Ga0068856_100017747 Ga0068856_1000177476 319
160 3300005616 Ga0068852_100279352 Ga0068852_1002793521 319
161 3300005985 Ga0081539_10003166 Ga0081539_1000316615 319
162 3300009093 Ga0105240_10272886 Ga0105240_102728862 319
163 3300009551 Ga0105238_10182466 Ga0105238_101824662 319
164 3300010375 Ga0105239_10307623 Ga0105239_103076232 319
165 3300011119 Ga0105246_10042190 Ga0105246_100421904 319
166 3300014325 Ga0163163_10017117 Ga0163163_100171172 319
167 3300014968 Ga0157379_10000611 Ga0157379_1000061115 319
168 3300025924 Ga0207694_10156332 Ga0207694_101563322 319
169 3300026067 Ga0207678_10000793 Ga0207678_1000079332 319
170 3300026078 Ga0207702_10013024 Ga0207702_100130244 319
171 3300026142 Ga0207698_10251369 Ga0207698_102513692 319
172 3300037312 Ga0395899_0015687 Ga0395899_0015687_2562_3536 319
173 3300041404 Ga0439436_0016647 Ga0439436_0016647_764_1741 319
174 3300041405 Ga0439438_008506 Ga0439438_008506_1780_2757 319
175 3300042007 Ga0439449_0005581 Ga0439449_0005581_2319_3296 319
176 3300042014 Ga0439457_000972 Ga0439457_000972_1542_2519 319
177 3300044765 Ga0466970_0025334 Ga0466970_0025334_130_1116 319
178 3300048907 Ga0496104_0042446 Ga0496104_0042446_2474_3436 319
179 3300048912 Ga0496109_0393062 Ga0496109_0393062_164_1126 319
180 3300048921 Ga0496118_0187391 Ga0496118_0187391_149_1213 319
181 3300048922 Ga0496119_0007394 Ga0496119_0007394_5396_6358 319
182 3300048924 Ga0496121_0005613 Ga0496121_0005613_7631_8695 319
183 3300048924 Ga0496121_0068679 Ga0496121_0068679_800_1762 319
184 3300048928 Ga0496125_0060440 Ga0496125_0060440_691_1653 319
185 3300050491 nmdc:mga00v17_39398_c1 nmdc:mga00v17_39398_c1_1527_2489 319
186 iso_pu_bacteria 2643221961 2645719676 319
187 iso_pu_bacteria 2643221962 2645726562 319
188 iso_pu_bacteria 2866612099 2866619078 319
189 iso_pu_bacteria 8057568493 8057571314 319
190 3300005347 Ga0070668_100000148 Ga0070668_1000001482 320
191 3300005937 Ga0081455_10008058 Ga0081455_100080586 320
192 3300006038 Ga0075365_10174858 Ga0075365_101748582 320
193 3300006042 Ga0075368_10050390 Ga0075368_100503902 320
194 3300006353 Ga0075370_10123504 Ga0075370_101235042 320
195 3300021384 Ga0213876_10158410 Ga0213876_101584102 320
196 3300025972 Ga0207668_10103578 Ga0207668_101035782 320
197 3300028786 Ga0307517_10163772 Ga0307517_101637722 320
198 3300031730 Ga0307516_10026282 Ga0307516_100262823 320
199 3300032126 Ga0307415_100039145 Ga0307415_1000391452 320
200 3300035088 Ga0373940_0013244 Ga0373940_0013244_872_1879 320
201 3300035115 Ga0373941_0026606 Ga0373941_0026606_248_1255 320
202 3300035207 Ga0373942_0000961 Ga0373942_0000961_6704_7711 320
203 3300037466 Ga0395898_0013280 Ga0395898_0013280_1800_2792 320
204 3300037471 Ga0395905_0043052 Ga0395905_0043052_257_1249 320
205 3300038443 Ga0395901_0071272 Ga0395901_0071272_2004_2996 320
206 3300039437 Ga0436365_0158524 Ga0436365_0158524_189_1157 320
207 3300044694 Ga0466963_0079840 Ga0466963_0079840_43_1080 320
208 3300044842 Ga0466957_0058339 Ga0466957_0058339_763_1743 320
209 3300048918 Ga0496115_0055010 Ga0496115_0055010_2061_3098 320
210 3300049570 Ga0501033_0094165 Ga0501033_0094165_416_1429 320
211 3300049571 Ga0501034_0261681 Ga0501034_0261681_608_1621 320
212 3300049574 Ga0501038_0041378 Ga0501038_0041378_885_1898 320
213 3300049580 Ga0501046_0012276 Ga0501046_0012276_2947_3960 320
214 3300049586 Ga0501070_0176361 Ga0501070_0176361_133_1146 320
215 3300049588 Ga0501072_0000923 Ga0501072_0000923_13833_14801 320
216 3300049589 Ga0501073_0003311 Ga0501073_0003311_5654_6667 320
217 3300049589 Ga0501073_0024210 Ga0501073_0024210_2430_3398 320
218 3300049590 Ga0501074_0044973 Ga0501074_0044973_56_1024 320
219 3300049590 Ga0501074_0153623 Ga0501074_0153623_154_1167 320
220 3300049741 Ga0501079_0021162 Ga0501079_0021162_3528_4496 320
221 3300049741 Ga0501079_0051129 Ga0501079_0051129_1781_2794 320
222 3300049742 Ga0501080_0029263 Ga0501080_0029263_3767_4735 320
223 3300049744 Ga0501083_0000481 Ga0501083_0000481_1758_2726 320
224 3300050494 nmdc:mga06z11_109004_c1 nmdc:mga06z11_109004_c1_379_1344 320
225 3300053139 Ga0500568_0000502 Ga0500568_0000502_3985_4962 320
226 3300053143 Ga0500579_072499 Ga0500579_072499_777_1787 320
227 iso_pu_bacteria 2508501039 2508674585 320
228 iso_pu_bacteria 2616644941 2616906578 320
229 iso_pu_bacteria 2675903058 2676478402 320
230 iso_pu_bacteria 2784132148 2784589317 320
231 iso_pu_bacteria 2786546132 2786666915 320
232 iso_pu_bacteria 2808606448 2809232937 320
233 iso_pu_bacteria 2827628540 2827632716 320
234 iso_pu_bacteria 2837268691 2837273408 320
235 iso_pu_bacteria 2868088558 2868092608 320
236 iso_pu_bacteria 2899359706 2899362214 320
237 iso_pu_bacteria 2915768154 2915776135 320
238 iso_pu_bacteria 2954673503 2954682000 320
239 iso_pu_bacteria 2954682443 2954690926 320
240 iso_pu_bacteria 2954711539 2954712149 320
241 iso_pu_bacteria 2954721474 2954722094 320
242 iso_pu_bacteria 2954731030 2954739757 320
243 iso_pu_bacteria 2954740390 2954740987 320
244 iso_pu_bacteria 2954749733 2954758580 320
245 iso_pu_bacteria 2954759201 2954759994 320
246 iso_pu_bacteria 8023623736 8023628739 320
247 iso_pu_bacteria 8033684223 8033687596 320
248 3300003203 JGI25406J46586_10004237 JGI25406J46586_100042374 321
249 3300005343 Ga0070687_100141200 Ga0070687_1001412001 321
250 3300005347 Ga0070668_100013144 Ga0070668_1000131445 321
251 3300005367 Ga0070667_100010675 Ga0070667_1000106755 321
252 3300005435 Ga0070714_100021715 Ga0070714_1000217152 321
253 3300005435 Ga0070714_100039496 Ga0070714_1000394962 321
254 3300005436 Ga0070713_100108787 Ga0070713_1001087872 321
255 3300005445 Ga0070708_100099852 Ga0070708_1000998522 321
256 3300005468 Ga0070707_100022332 Ga0070707_1000223328 321
257 3300005548 Ga0070665_100000151 Ga0070665_10000015132 321
258 3300005843 Ga0068860_100000669 Ga0068860_10000066921 321
259 3300005844 Ga0068862_100002003 Ga0068862_10000200318 321
260 3300005937 Ga0081455_10027009 Ga0081455_100270092 321
261 3300005985 Ga0081539_10004602 Ga0081539_100046026 321
262 3300005985 Ga0081539_10023515 Ga0081539_100235153 321
263 3300006038 Ga0075365_10011780 Ga0075365_100117805 321
264 3300006038 Ga0075365_10024747 Ga0075365_100247475 321
265 3300006038 Ga0075365_10047537 Ga0075365_100475372 321
266 3300006038 Ga0075365_10105906 Ga0075365_101059062 321
267 3300006051 Ga0075364_10011797 Ga0075364_100117974 321
268 3300009098 Ga0105245_10346620 Ga0105245_103466202 321
269 3300009148 Ga0105243_10036313 Ga0105243_100363132 321
270 3300011119 Ga0105246_10323628 Ga0105246_103236282 321
271 3300014325 Ga0163163_10052820 Ga0163163_100528204 321
272 3300014968 Ga0157379_10000516 Ga0157379_1000051631 321
273 3300014968 Ga0157379_10052137 Ga0157379_100521372 321
274 3300017792 Ga0163161_10040307 Ga0163161_100403072 321
275 3300025922 Ga0207646_10025485 Ga0207646_100254854 321
276 3300025927 Ga0207687_10262119 Ga0207687_102621192 321
277 3300025928 Ga0207700_10024024 Ga0207700_100240244 321
278 3300025928 Ga0207700_10091485 Ga0207700_100914853 321
279 3300025929 Ga0207664_10022890 Ga0207664_100228904 321
280 3300025929 Ga0207664_10092596 Ga0207664_100925962 321
281 3300025939 Ga0207665_10004080 Ga0207665_100040804 321
282 3300025941 Ga0207711_10000170 Ga0207711_1000017020 321
283 3300025945 Ga0207679_10014308 Ga0207679_100143085 321
284 3300025961 Ga0207712_10005249 Ga0207712_100052493 321
285 3300025972 Ga0207668_10001685 Ga0207668_100016859 321
286 3300025986 Ga0207658_10014036 Ga0207658_100140364 321
287 3300026088 Ga0207641_10121154 Ga0207641_101211542 321
288 3300026121 Ga0207683_10151182 Ga0207683_101511822 321
289 3300028379 Ga0268266_10009215 Ga0268266_100092157 321
290 3300028380 Ga0268265_10001377 Ga0268265_1000137720 321
291 3300028381 Ga0268264_10000510 Ga0268264_1000051033 321
292 3300028381 Ga0268264_10022742 Ga0268264_100227422 321
293 3300028381 Ga0268264_10060656 Ga0268264_100606562 321
294 3300028794 Ga0307515_10099510 Ga0307515_100995102 321
295 3300030731 Ga0316177_1181354 Ga0316177_11813543 321
296 3300030733 Ga0314311_1102152 Ga0314311_11021522 321
297 3300030736 Ga0316180_1157287 Ga0316180_11572872 321
298 3300031456 Ga0307513_10000003 Ga0307513_10000003368 321
299 3300031507 Ga0307509_10083433 Ga0307509_100834332 321
300 3300031507 Ga0307509_10153483 Ga0307509_101534832 321
301 3300031616 Ga0307508_10000982 Ga0307508_1000098227 321
302 3300031730 Ga0307516_10001068 Ga0307516_100010683 321
303 3300037312 Ga0395899_0033195 Ga0395899_0033195_215_1240 321
304 3300037418 Ga0395900_0001084 Ga0395900_0001084_18905_19930 321
305 3300037466 Ga0395898_0000270 Ga0395898_0000270_15061_16086 321
306 3300037466 Ga0395898_0076734 Ga0395898_0076734_2120_3139 321
307 3300037471 Ga0395905_0291950 Ga0395905_0291950_271_1290 321
308 3300038443 Ga0395901_0026498 Ga0395901_0026498_271_1290 321
309 3300041512 Ga0451853_0315918 Ga0451853_0315918_61_1047 321
310 3300042005 Ga0439448_0040192 Ga0439448_0040192_473_1486 321
311 3300042012 Ga0439455_0022015 Ga0439455_0022015_289_1302 321
312 3300042138 Ga0450903_003928 Ga0450903_003928_1186_2199 321
313 3300042157 Ga0439458_0001072 Ga0439458_0001072_5853_6866 321
314 3300044656 Ga0466969_0021095 Ga0466969_0021095_945_2027 321
315 3300044658 Ga0466972_0004812 Ga0466972_0004812_3198_4214 321
316 3300044694 Ga0466963_0004911 Ga0466963_0004911_3036_4076 321
317 3300044901 Ga0466960_0000185 Ga0466960_0000185_12731_13705 321
318 3300044901 Ga0466960_0010693 Ga0466960_0010693_1574_2626 321
319 3300045836 Ga0466958_0055521 Ga0466958_0055521_979_2019 321
320 3300045976 Ga0466967_0001962 Ga0466967_0001962_5009_6037 321
321 3300045976 Ga0466967_0365475 Ga0466967_0365475_374_1348 321
322 3300046462 Ga0495651_0002434 Ga0495651_0002434_9231_10367 321
323 3300048912 Ga0496109_0272538 Ga0496109_0272538_233_1225 321
324 3300048920 Ga0496117_0007221 Ga0496117_0007221_9250_10341 321
325 3300048921 Ga0496118_0004415 Ga0496118_0004415_9947_11038 321
326 3300048929 Ga0496126_0158331 Ga0496126_0158331_720_1760 321
327 3300049573 Ga0501037_0016188 Ga0501037_0016188_1002_2018 321
328 3300049582 Ga0501048_0086766 Ga0501048_0086766_782_1798 321
329 3300049586 Ga0501070_0000013 Ga0501070_0000013_161773_162801 321
330 3300049586 Ga0501070_0041988 Ga0501070_0041988_855_1841 321
331 3300049587 Ga0501071_0084199 Ga0501071_0084199_739_1767 321
332 3300049744 Ga0501083_0114128 Ga0501083_0114128_392_1408 321
333 3300049822 Ga0501035_0020540 Ga0501035_0020540_3226_4197 321
334 3300050490 nmdc:mga03n38_16979_c1 nmdc:mga03n38_16979_c1_738_1772 321
335 3300050491 nmdc:mga00v17_287246_c1 nmdc:mga00v17_287246_c1_29_1003 321
336 3300050496 nmdc:mga07m45_4678_c1 nmdc:mga07m45_4678_c1_2869_3903 321
337 3300053103 Ga0500555_000005 Ga0500555_000005_21442_22410 321
338 3300053151 Ga0500604_0008760 Ga0500604_0008760_404_1465 321
339 3300061719 Ga0466962_0090340 Ga0466962_0090340_328_1359 321
340 iso_pu_bacteria 8056207758 8056210853 321
341 3300003323 rootH1_10000556 rootH1_1000055610 323
342 3300044694 Ga0466963_0129494 Ga0466963_0129494_628_1656 323
343 3300045976 Ga0466967_0037028 Ga0466967_0037028_1996_3024 323
344 3300053088 Ga0500644_0000054 Ga0500644_0000054_44449_45444 323
345 3300037466 Ga0395898_0077381 Ga0395898_0077381_112_1125 324
346 3300048929 Ga0496126_0000007 Ga0496126_0000007_693286_694305 325
347 3300001915 JGI24741J21665_1005696 JGI24741J21665_10056962 326
348 3300009093 Ga0105240_10003316 Ga0105240_1000331614 326
349 3300009986 Ga0105033_100025 Ga0105033_1000253 326
350 3300013100 Ga0157373_10000061 Ga0157373_10000061102 326
351 3300025913 Ga0207695_10006661 Ga0207695_100066613 326

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

66

379

0.95

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

170

352

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1dxy-assembly1.cif.gz_A structure of d-2-hydroxyisocaproate dehydrogenase 0.9423 4 319
2yq5-assembly1.cif.gz_C crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase from lactobacillus delbrueckii ssp. bulgaricus: nad complexed form 0.9422 4 318
1j4a-assembly1.cif.gz_B insights into domain closure, substrate specificity and catalysis of d-lactate dehydrogenase from lactobacillus bulgaricus 0.9414 4 318
4xkj-assembly1.cif.gz_B a novel d-lactate dehydrogenase from sporolactobacillus sp 0.9316 4 317
7jp2-assembly1.cif.gz_B crystal structure of tp0037 from treponema pallidum, a d-lactate dehydrogenase 0.9295 4 318
ID Description Score Start End Superfamily
af_Q9P7Q1_142_301_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9817 148 297 3.40.50.720
af_Q9P7P8_108_296_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9711 110 292 3.40.50.720
af_Q2FVA3_125_286_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9704 141 297 3.40.50.720
af_Q54UF7_111_296_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9669 116 292 3.40.50.720
1j4aB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9606 104 292 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A380EMA9-F1-model_v4 D-lactate dehydrogenase (EC 1.1.1.28) 0.9771 188 300 GO:0008720
GO:0051287
AF-A0A6B3HW29-F1-model_v4 2-hydroxyacid dehydrogenase 0.9753 167 297 GO:0008720
GO:0051287
AF-A0A4Y1ZC01-F1-model_v4 D-lactate dehydrogenase (EC 1.1.1.28) 0.9692 141 319 GO:0008720
GO:0051287
AF-A0A7S7FJJ8-F1-model_v4 deleted 0.968 115 318
AF-F7Z3F5-F1-model_v4 deleted 0.9674 114 317

Feature Viewer

pLDDT pTM Quality
93.72 0.87 High
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Predicted Structure (AlphaFold2)

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