F418457

General Info

Members Datasets Scaffolds Average Seq Length
350 198 318 259

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2977232053|2977234103
Length 291
Sequence LKKIFSPLETRYFVSSFDEREQLQPARRKVLCVYKALLVFFCATTMASGAFAQLPKLPEPAFKAGEELSYKLKYGWFTGAEAHLKIAETNEKFEGGKPAWHIIADGKTAGTFDVFYKVRNRYETFIDHNTLMPYLYTEDRREAKYKHQDRVVFDHQTDKITANSGTYPFSGQVFDFPSAYYFARCLDVSKLKIGETFQLRYFLDDSIQAMTITYLGKETVECSMGKFSCLKFNPTIIPGRIFRKNSKLYLWVTDDGNRIPVKAHVELVVGSVTMDLTGAKGLKYPLNPIKK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2738541283 Pedobacter sp. OK701 Isolate Unclassified
5 2738541284 Pedobacter sp. YR016 Isolate Unclassified
6 2738541302 Pedobacter sp. CF074 Isolate Unclassified
7 2738543023 Pedobacter sp. OK628 Isolate Unclassified
8 2739367663 Pedobacter sp. YR510 Isolate Unclassified
9 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
10 2818991437 Pedobacter terrae 518 Isolate Unclassified
11 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
12 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
13 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
14 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
15 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
16 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
17 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
18 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
19 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
20 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
21 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
22 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
23 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
24 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
25 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
26 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
27 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
28 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
29 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
30 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
31 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
32 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
33 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
34 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
35 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
36 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
37 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
38 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
39 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
40 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
41 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
42 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
43 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
44 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
45 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
52 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
53 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
54 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
55 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
56 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
57 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
58 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
59 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
60 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
61 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
62 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
63 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
64 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
67 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
68 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
69 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
70 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
71 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
72 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
73 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
74 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
75 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
76 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
77 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
83 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
84 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
85 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
86 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
91 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
92 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
93 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
94 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
95 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
96 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
97 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
99 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
100 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
101 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
102 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
103 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
104 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
134 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
135 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
136 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
137 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
138 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
139 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
140 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
141 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
142 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
143 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
144 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
145 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
146 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
147 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
148 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
149 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
150 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
151 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
152 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
153 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
154 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
155 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
156 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
157 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
158 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
159 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
160 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
161 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
162 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
163 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
164 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
165 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
166 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
167 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
168 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
169 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
172 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
173 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
174 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
175 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
176 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
177 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
178 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
179 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
180 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
181 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
182 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
183 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
184 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
185 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
186 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
187 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
188 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
189 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
190 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
191 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
192 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
193 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
194 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
195 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
196 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
197 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
198 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90
Metatranscriptomes 0.86
Isolates 9.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.29
Nodule 0
Rhizoplane 0.86
Rhizosphere 78.86
Stem 0
Stem Tuber 0
Unclassified 10

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2712303 2162886007 Bacteria 5315
2 JGI24736J21556_1000814 3300001904 Bacteria 5761
3 JGI24737J22298_10022784 3300001990 Bacteria 1990
4 JGI24735J21928_10000015 3300002067 Bacteria 167231
5 JGI24744J21845_10001049 3300002077 Bacteria 5328
6 JGI25162J39368_1000016 3300002737 Bacteria 288734
7 JGI25162J39368_1003245 3300002737 Bacteria 4982
8 JGI25152J39213_1000300 3300002773 Bacteria 31900
9 JGI25150J39212_1000023 3300002774 Bacteria 130663
10 JGI25151J46595_10000082 3300003187 Bacteria 130832
11 JGI25165J46597_1001134 3300003214 Bacteria 16713
12 JGI25153J46596_10000060 3300003215 Bacteria 131744
13 rootH1_10004782 3300003316 Bacteria 8615
14 rootH1_10013584 3300003316 Bacteria 4023
15 rootH2_10012859 3300003320 Bacteria 7490
16 rootH2_10069104 3300003320 Bacteria 6088
17 rootH2_10072943 3300003320 Bacteria 2625
18 rootL2_10087569 3300003322 Bacteria 2246
19 rootH1_10003399 3300003323 Bacteria 54122
20 Ga0058863_11838219 3300004799 Bacteria 1548
21 Ga0058862_11810259 3300004803 Bacteria 1492
22 Ga0065714_10002553 3300005288 Bacteria 19114
23 Ga0065714_10038700 3300005288 Bacteria 1332
24 Ga0065714_10064439 3300005288 Bacteria 112310
25 Ga0065704_10074918 3300005289 Bacteria 5914
26 Ga0070658_10000008 3300005327 Bacteria 319912
27 Ga0070658_10020421 3300005327 Bacteria 5309
28 Ga0070676_10001016 3300005328 Bacteria 13922
29 Ga0070683_100006005 3300005329 Bacteria 10175
30 Ga0070680_100013348 3300005336 Bacteria 6397
31 Ga0068868_100103392 3300005338 Bacteria 2307
32 Ga0070673_100128136 3300005364 Bacteria 2126
33 Ga0070673_100197310 3300005364 Bacteria 1732
34 Ga0070662_100000863 3300005457 Bacteria 18571
35 Ga0070662_100443118 3300005457 Bacteria 1077
36 Ga0070681_10002959 3300005458 Bacteria 15767
37 Ga0070681_10580119 3300005458 Bacteria 1035
38 Ga0068867_100221352 3300005459 Bacteria 1525
39 Ga0070679_100004682 3300005530 Bacteria 12624
40 Ga0070684_100016169 3300005535 Bacteria 6095
41 Ga0068853_100029060 3300005539 Bacteria 4656
42 Ga0068853_100598409 3300005539 Bacteria 1047
43 Ga0070672_100125451 3300005543 Bacteria 2105
44 Ga0070665_100000061 3300005548 Bacteria 222138
45 Ga0068855_100000130 3300005563 Bacteria 95659
46 Ga0068855_100000393 3300005563 Bacteria 53897
47 Ga0068855_100009523 3300005563 Bacteria 11729
48 Ga0068855_100048606 3300005563 Bacteria 5006
49 Ga0068855_100081504 3300005563 Bacteria 3750
50 Ga0068855_100218901 3300005563 Bacteria 2136
51 Ga0068855_100475456 3300005563 Bacteria 1361
52 Ga0068856_100000112 3300005614 Bacteria 80466
53 Ga0068856_100015216 3300005614 Bacteria 7434
54 Ga0068856_100187767 3300005614 Bacteria 2080
55 Ga0068852_100003809 3300005616 Bacteria 10584
56 Ga0068852_100149553 3300005616 Bacteria 2170
57 Ga0068858_100407142 3300005842 Bacteria 1307
58 Ga0068858_100488860 3300005842 Bacteria 1188
59 Ga0075366_10000170 3300006195 Bacteria 27881
60 Ga0075366_10000799 3300006195 Bacteria 15070
61 Ga0075366_10000929 3300006195 Bacteria 14226
62 Ga0097621_100000016 3300006237 Bacteria 91785
63 Ga0075370_10074311 3300006353 Bacteria 1948
64 Ga0068871_100000504 3300006358 Bacteria 26679
65 Ga0068865_100000214 3300006881 Bacteria 32364
66 Ga0105240_10000082 3300009093 Bacteria 195184
67 Ga0105240_10017264 3300009093 Bacteria 9735
68 Ga0105240_10038249 3300009093 Bacteria 6156
69 Ga0105240_10112437 3300009093 Bacteria 3292
70 Ga0105240_10259537 3300009093 Bacteria 2005
71 Ga0105240_10527129 3300009093 Bacteria 1310
72 Ga0105245_10114311 3300009098 Bacteria 2514
73 Ga0105245_10888282 3300009098 Unclassified 932
74 Ga0105241_10000116 3300009174 Bacteria 57591
75 Ga0105241_10013076 3300009174 Bacteria 6086
76 Ga0105241_10088234 3300009174 Bacteria 2442
77 Ga0105241_10524906 3300009174 Bacteria 1059
78 Ga0105242_10043285 3300009176 Bacteria 3642
79 Ga0105237_10000310 3300009545 Bacteria 67887
80 Ga0105237_10000394 3300009545 Bacteria 62227
81 Ga0105237_10005228 3300009545 Bacteria 14683
82 Ga0105237_10024919 3300009545 Bacteria 6120
83 Ga0105237_10034525 3300009545 Bacteria 5120
84 Ga0105237_10071114 3300009545 Bacteria 3475
85 Ga0105237_10071256 3300009545 Bacteria 3470
86 Ga0105237_10201974 3300009545 Bacteria 1988
87 Ga0105237_10203340 3300009545 Bacteria 1981
88 Ga0105238_10012340 3300009551 Bacteria 8617
89 Ga0105239_10000166 3300010375 Bacteria 94743
90 Ga0105239_10000740 3300010375 Bacteria 46443
91 Ga0105239_10003303 3300010375 Bacteria 19863
92 Ga0105239_10005013 3300010375 Bacteria 15635
93 Ga0105239_10038256 3300010375 Bacteria 5257
94 Ga0105239_10077998 3300010375 Bacteria 3645
95 Ga0105239_10182668 3300010375 Bacteria 2347
96 Ga0105239_10780538 3300010375 Bacteria 1094
97 Ga0105239_11217386 3300010375 Bacteria 868
98 Ga0157373_10000089 3300013100 Bacteria 78449
99 Ga0157373_10005698 3300013100 Bacteria 9338
100 Ga0157373_10030332 3300013100 Bacteria 3890
101 Ga0157373_10081362 3300013100 Bacteria 2283
102 Ga0157371_10003213 3300013102 Bacteria 15005
103 Ga0157371_10006312 3300013102 Bacteria 9817
104 Ga0157371_10029147 3300013102 Bacteria 3995
105 Ga0157371_10033505 3300013102 Bacteria 3690
106 Ga0157371_10488495 3300013102 Unclassified 908
107 Ga0157370_10002659 3300013104 Bacteria 21448
108 Ga0157370_10037726 3300013104 Bacteria 4681
109 Ga0157370_10077492 3300013104 Bacteria 3131
110 Ga0157370_10180705 3300013104 Bacteria 1960
111 Ga0157370_10207404 3300013104 Bacteria 1817
112 Ga0157369_10000594 3300013105 Bacteria 47098
113 Ga0157369_10022085 3300013105 Bacteria 7109
114 Ga0157369_10055728 3300013105 Bacteria 4267
115 Ga0157374_10000427 3300013296 Bacteria 38121
116 Ga0157374_10000642 3300013296 Bacteria 30802
117 Ga0157374_10019406 3300013296 Bacteria 6017
118 Ga0157374_10425471 3300013296 Unclassified 1327
119 Ga0157378_10016920 3300013297 Bacteria 6393
120 Ga0157378_10096044 3300013297 Bacteria 2700
121 Ga0163162_10000123 3300013306 Bacteria 68905
122 Ga0163162_10075378 3300013306 Bacteria 3434
123 Ga0163162_10351852 3300013306 Bacteria 1606
124 Ga0157372_10000039 3300013307 Bacteria 165839
125 Ga0157372_10001390 3300013307 Bacteria 26087
126 Ga0157372_10003208 3300013307 Bacteria 17660
127 Ga0157372_10007944 3300013307 Bacteria 11276
128 Ga0157375_10058487 3300013308 Bacteria 3814
129 Ga0157375_10192537 3300013308 Bacteria 2194
130 Ga0182008_10000020 3300014497 Bacteria 228333
131 Ga0182008_10000170 3300014497 Bacteria 50871
132 Ga0182008_10000461 3300014497 Bacteria 31061
133 Ga0182008_10030935 3300014497 Bacteria 2696
134 Ga0182008_10065175 3300014497 Bacteria 1793
135 Ga0157376_10587351 3300014969 Bacteria 1107
136 Ga0182006_1000108 3300015261 Bacteria 89633
137 Ga0182006_1000270 3300015261 Bacteria 46578
138 Ga0182006_1000360 3300015261 Bacteria 38015
139 Ga0182006_1004894 3300015261 Bacteria 6490
140 Ga0182006_1106386 3300015261 Bacteria 989
141 Ga0182007_10000024 3300015262 Bacteria 181761
142 Ga0182007_10020174 3300015262 Bacteria 2388
143 Ga0182007_10030138 3300015262 Bacteria 1856
144 Ga0182007_10058727 3300015262 Bacteria 1262
145 Ga0182007_10114939 3300015262 Bacteria 898
146 Ga0183373_1002 3300015682 Bacteria 990153
147 Ga0163161_10000093 3300017792 Bacteria 90618
148 Ga0163161_10000094 3300017792 Bacteria 90423
149 Ga0163161_10001465 3300017792 Bacteria 17448
150 Ga0163161_10031315 3300017792 Bacteria 3789
151 Ga0206352_10183235 3300020078 Bacteria 1294
152 Ga0209563_102233 3300025230 Bacteria 4487
153 Ga0207427_100122 3300025231 Bacteria 99064
154 Ga0209437_100048 3300025233 Bacteria 405107
155 Ga0209437_100119 3300025233 Bacteria 206549
156 Ga0207425_1000051 3300025245 Bacteria 166795
157 Ga0209026_1000304 3300025250 Bacteria 53704
158 Ga0209026_1001474 3300025250 Bacteria 10370
159 Ga0209026_1004480 3300025250 Bacteria 4125
160 Ga0209129_1000121 3300025258 Bacteria 135404
161 Ga0209129_1011339 3300025258 Bacteria 2136
162 Ga0209233_1000029 3300025261 Bacteria 641642
163 Ga0209455_1018953 3300025272 Bacteria 1401
164 Ga0209025_1000160 3300025294 Bacteria 166795
165 Ga0209758_1000147 3300025297 Bacteria 166795
166 Ga0207655_1070140 3300025728 Bacteria 1306
167 Ga0207647_10000018 3300025904 Bacteria 124816
168 Ga0207645_10000172 3300025907 Bacteria 51794
169 Ga0207705_10000035 3300025909 Bacteria 201649
170 Ga0207705_10020066 3300025909 Bacteria 4779
171 Ga0207654_10006275 3300025911 Bacteria 5975
172 Ga0207654_10015082 3300025911 Bacteria 4002
173 Ga0207654_10078873 3300025911 Bacteria 1977
174 Ga0207654_10469292 3300025911 Bacteria 885
175 Ga0207707_10004330 3300025912 Bacteria 12569
176 Ga0207695_10000053 3300025913 Bacteria 396740
177 Ga0207695_10003291 3300025913 Bacteria 22952
178 Ga0207695_10017987 3300025913 Bacteria 8184
179 Ga0207695_10315261 3300025913 Bacteria 1454
180 Ga0207671_10000366 3300025914 Bacteria 64454
181 Ga0207671_10000925 3300025914 Bacteria 36841
182 Ga0207671_10006511 3300025914 Bacteria 10383
183 Ga0207671_10007345 3300025914 Bacteria 9568
184 Ga0207671_10008823 3300025914 Bacteria 8492
185 Ga0207671_10028615 3300025914 Bacteria 4162
186 Ga0207671_10031621 3300025914 Bacteria 3943
187 Ga0207671_10219212 3300025914 Bacteria 1490
188 Ga0207660_10054438 3300025917 Bacteria 2855
189 Ga0207687_10112084 3300025927 Bacteria 2026
190 Ga0207644_10004990 3300025931 Bacteria 8662
191 Ga0207706_10000013 3300025933 Bacteria 188236
192 Ga0207686_10083771 3300025934 Bacteria 2088
193 Ga0207704_10000354 3300025938 Bacteria 21443
194 Ga0207691_10147266 3300025940 Bacteria 2072
195 Ga0207661_10006414 3300025944 Bacteria 8321
196 Ga0207667_10000117 3300025949 Bacteria 127391
197 Ga0207667_10000274 3300025949 Bacteria 71328
198 Ga0207667_10039395 3300025949 Bacteria 5037
199 Ga0207667_10501279 3300025949 Unclassified 1231
200 Ga0207651_10102396 3300025960 Bacteria 2128
201 Ga0207677_10009462 3300026023 Bacteria 5484
202 Ga0207677_10218176 3300026023 Bacteria 1528
203 Ga0207703_10348936 3300026035 Bacteria 1362
204 Ga0207639_10024670 3300026041 Bacteria 4355
205 Ga0207639_10035061 3300026041 Bacteria 3712
206 Ga0207702_10000278 3300026078 Bacteria 58953
207 Ga0207702_10020477 3300026078 Bacteria 5476
208 Ga0207702_10839286 3300026078 Bacteria 909
209 Ga0207648_10012932 3300026089 Bacteria 7794
210 Ga0207683_10054622 3300026121 Bacteria 3502
211 Ga0207683_10211078 3300026121 Bacteria 1767
212 Ga0207698_10007919 3300026142 Bacteria 6692
213 Ga0207698_10104392 3300026142 Bacteria 2358
214 Ga0207698_10499965 3300026142 Unclassified 1183
215 Ga0268266_10000053 3300028379 Bacteria 295181
216 Ga0307517_10000447 3300028786 Bacteria 70799
217 Ga0307515_10000316 3300028794 Bacteria 119243
218 Ga0307515_10001308 3300028794 Bacteria 56577
219 Ga0307515_10048357 3300028794 Bacteria 6432
220 Ga0265338_10047663 3300028800 Bacteria 3911
221 Ga0316177_1001028 3300030731 Bacteria 4736
222 Ga0316176_1102297 3300030732 Bacteria 14584
223 Ga0316183_1003890 3300030742 Bacteria 25813
224 Ga0316181_1126640 3300030744 Unclassified 1180
225 Ga0316181_1131993 3300030744 Bacteria 4241
226 Ga0316181_1132288 3300030744 Unclassified 3701
227 Ga0307513_10173800 3300031456 Bacteria 2028
228 Ga0307408_100001538 3300031548 Bacteria 17127
229 Ga0307405_10000011 3300031731 Bacteria 241071
230 Ga0307407_10000163 3300031903 Bacteria 20529
231 Ga0307412_10000001 3300031911 Bacteria 822691
232 Ga0307412_10001430 3300031911 Bacteria 13285
233 Ga0307412_10009032 3300031911 Bacteria 5710
234 Ga0307409_100075761 3300031995 Bacteria 2695
235 Ga0307416_100000050 3300032002 Bacteria 116313
236 Ga0307416_100101273 3300032002 Bacteria 2508
237 Ga0307414_10005075 3300032004 Bacteria 7216
238 Ga0307414_10016198 3300032004 Bacteria 4525
239 Ga0307414_10036927 3300032004 Bacteria 3267
240 Ga0307414_10048868 3300032004 Bacteria 2921
241 Ga0307414_10088710 3300032004 Unclassified 2289
242 Ga0307414_10152525 3300032004 Unclassified 1825
243 Ga0307414_10155650 3300032004 Unclassified 1809
244 Ga0307414_10199171 3300032004 Bacteria 1627
245 Ga0307414_10308451 3300032004 Bacteria 1342
246 Ga0307507_10000337 3300033179 Bacteria 95356
247 Ga0307510_10001184 3300033180 Bacteria 28153
248 Ga0395899_0000027 3300037312 Bacteria 337387
249 Ga0395899_0000282 3300037312 Bacteria 66053
250 Ga0395899_0001270 3300037312 Bacteria 21938
251 Ga0395900_0000195 3300037418 Bacteria 97204
252 Ga0395900_0002423 3300037418 Bacteria 20558
253 Ga0395900_0009107 3300037418 Bacteria 10169
254 Ga0395898_0024509 3300037466 Bacteria 6085
255 Ga0395905_0000993 3300037471 Bacteria 36305
256 Ga0395905_0001272 3300037471 Bacteria 31128
257 Ga0395901_0000644 3300038443 Bacteria 40364
258 Ga0395901_0005293 3300038443 Bacteria 13041
259 Ga0436361_1126675 3300039447 Bacteria 11002
260 Ga0439457_010490 3300042014 Unclassified 2128
261 Ga0466966_0008901 3300044684 Bacteria 6649
262 Ga0495650_0000144 3300046471 Bacteria 165957
263 Ga0495605_0127124 3300046474 Unclassified 1152
264 Ga0495585_0000091 3300046492 Bacteria 95620
265 Ga0495585_0000658 3300046492 Bacteria 31746
266 Ga0495583_0028585 3300046506 Bacteria 2739
267 Ga0495606_0000919 3300046507 Bacteria 43453
268 Ga0495610_0000219 3300046512 Bacteria 61501
269 Ga0495610_0002599 3300046512 Bacteria 14973
270 Ga0495610_0007529 3300046512 Bacteria 7215
271 Ga0495637_0040482 3300046520 Bacteria 2006
272 Ga0495644_0007582 3300046523 Bacteria 4183
273 Ga0495648_0004431 3300046524 Bacteria 11994
274 Ga0495648_0068494 3300046524 Bacteria 2070
275 Ga0495642_0088048 3300046528 Unclassified 1312
276 Ga0495633_0000026 3300046558 Bacteria 204722
277 Ga0495668_0000054 3300046616 Bacteria 203960
278 Ga0495625_0000059 3300046660 Bacteria 180330
279 Ga0495625_0001227 3300046660 Bacteria 32490
280 Ga0495625_0003592 3300046660 Bacteria 15260
281 Ga0495625_0014323 3300046660 Bacteria 6335
282 Ga0495625_0107515 3300046660 Bacteria 1909
283 Ga0495625_0210892 3300046660 Unclassified 1277
284 Ga0495625_0213348 3300046660 Bacteria 1268
285 Ga0495661_0018331 3300046665 Bacteria 4606
286 Ga0495661_0052808 3300046665 Bacteria 2447
287 Ga0495670_0137944 3300046691 Unclassified 1274
288 Ga0495671_0044835 3300046692 Bacteria 2216
289 Ga0495649_0000031 3300046694 Bacteria 151547
290 Ga0495660_0047165 3300046810 Bacteria 2360
291 Ga0495683_0041549 3300047323 Bacteria 2320
292 Ga0495687_000741 3300047443 Bacteria 35578
293 Ga0495687_001100 3300047443 Bacteria 26388
294 Ga0495673_0038717 3300047469 Bacteria 2167
295 Ga0495681_0130667 3300047470 Unclassified 1069
296 Ga0495686_0000621 3300047472 Bacteria 48956
297 Ga0495686_0000821 3300047472 Bacteria 40069
298 Ga0495686_0110750 3300047472 Bacteria 1647
299 Ga0496114_0134149 3300048917 Bacteria 2140
300 Ga0496115_0045646 3300048918 Bacteria 3499
301 Ga0496122_0000876 3300048925 Bacteria 56653
302 Ga0496123_0012651 3300048926 Bacteria 7167
303 Ga0496125_0083624 3300048928 Bacteria 2427
304 Ga0495678_009963 3300049459 Bacteria 4653
305 nmdc:mga0k408_1202_c1 3300050493 Bacteria 14176
306 nmdc:mga0k408_783_c1 3300050493 Bacteria 17509
307 nmdc:mga0k408_82_c1 3300050493 Bacteria 45008
308 nmdc:mga07m45_64249_c1 3300050496 Bacteria 2082
309 Ga0500635_0061102 3300053080 Bacteria 1315
310 Ga0500578_0256432 3300053086 Bacteria 1052
311 Ga0500651_0001126 3300053093 Bacteria 13227
312 Ga0500608_003416 3300053122 Bacteria 5951
313 Ga0500608_007715 3300053122 Bacteria 4470
314 Ga0500614_010008 3300053123 Bacteria 2030
315 Ga0500618_000018 3300053125 Bacteria 163272
316 Ga0500642_0075691 3300053130 Bacteria 1538
317 Ga0500622_0003981 3300053156 Bacteria 9532
318 Ga0500624_001241 3300053157 Bacteria 4521

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300032004 Ga0307414_10155650 Ga0307414_101556503 222
2 3300025911 Ga0207654_10015082 Ga0207654_100150823 234
3 3300004803 Ga0058862_11810259 Ga0058862_118102591 235
4 3300025917 Ga0207660_10054438 Ga0207660_100544381 235
5 3300003323 rootH1_10003399 rootH1_1000339932 236
6 3300009545 Ga0105237_10034525 Ga0105237_100345256 236
7 iso_pu_bacteria 2919186247 2919190606 237
8 iso_pu_bacteria 2939664404 2939669184 237
9 3300003320 rootH2_10072943 rootH2_100729432 238
10 3300032002 Ga0307416_100101273 Ga0307416_1001012733 242
11 3300047443 Ga0495687_000741 Ga0495687_000741_27523_28317 244
12 3300015262 Ga0182007_10030138 Ga0182007_100301382 246
13 3300053157 Ga0500624_001241 Ga0500624_001241_630_1409 248
14 3300048918 Ga0496115_0045646 Ga0496115_0045646_218_967 249
15 3300001904 JGI24736J21556_1000814 JGI24736J21556_10008145 250
16 3300001990 JGI24737J22298_10022784 JGI24737J22298_100227843 250
17 3300002077 JGI24744J21845_10001049 JGI24744J21845_100010494 250
18 3300005328 Ga0070676_10001016 Ga0070676_100010169 250
19 3300005338 Ga0068868_100103392 Ga0068868_1001033922 250
20 3300005364 Ga0070673_100128136 Ga0070673_1001281363 250
21 3300005364 Ga0070673_100197310 Ga0070673_1001973102 250
22 3300005457 Ga0070662_100000863 Ga0070662_10000086312 250
23 3300005459 Ga0068867_100221352 Ga0068867_1002213522 250
24 3300005543 Ga0070672_100125451 Ga0070672_1001254512 250
25 3300005548 Ga0070665_100000061 Ga0070665_100000061143 250
26 3300005563 Ga0068855_100081504 Ga0068855_1000815041 250
27 3300005616 Ga0068852_100003809 Ga0068852_1000038096 250
28 3300006237 Ga0097621_100000016 Ga0097621_10000001655 250
29 3300006358 Ga0068871_100000504 Ga0068871_1000005042 250
30 3300006881 Ga0068865_100000214 Ga0068865_10000021426 250
31 3300009093 Ga0105240_10017264 Ga0105240_100172648 250
32 3300009093 Ga0105240_10259537 Ga0105240_102595372 250
33 3300009174 Ga0105241_10000116 Ga0105241_1000011634 250
34 3300009176 Ga0105242_10043285 Ga0105242_100432853 250
35 3300009545 Ga0105237_10201974 Ga0105237_102019742 250
36 3300009551 Ga0105238_10012340 Ga0105238_100123403 250
37 3300010375 Ga0105239_10780538 Ga0105239_107805381 250
38 3300010375 Ga0105239_11217386 Ga0105239_112173861 250
39 3300013100 Ga0157373_10030332 Ga0157373_100303324 250
40 3300013104 Ga0157370_10207404 Ga0157370_102074043 250
41 3300013296 Ga0157374_10000427 Ga0157374_100004277 250
42 3300013296 Ga0157374_10000642 Ga0157374_100006423 250
43 3300013307 Ga0157372_10007944 Ga0157372_100079446 250
44 3300014969 Ga0157376_10587351 Ga0157376_105873511 250
45 3300015262 Ga0182007_10114939 Ga0182007_101149391 250
46 3300025904 Ga0207647_10000018 Ga0207647_1000001837 250
47 3300025907 Ga0207645_10000172 Ga0207645_1000017237 250
48 3300025911 Ga0207654_10006275 Ga0207654_100062755 250
49 3300025913 Ga0207695_10003291 Ga0207695_1000329114 250
50 3300025914 Ga0207671_10219212 Ga0207671_102192122 250
51 3300025933 Ga0207706_10000013 Ga0207706_10000013151 250
52 3300025934 Ga0207686_10083771 Ga0207686_100837713 250
53 3300025938 Ga0207704_10000354 Ga0207704_100003546 250
54 3300025940 Ga0207691_10147266 Ga0207691_101472662 250
55 3300025960 Ga0207651_10102396 Ga0207651_101023962 250
56 3300026023 Ga0207677_10009462 Ga0207677_100094625 250
57 3300026023 Ga0207677_10218176 Ga0207677_102181762 250
58 3300026041 Ga0207639_10024670 Ga0207639_100246704 250
59 3300026089 Ga0207648_10012932 Ga0207648_100129323 250
60 3300026121 Ga0207683_10054622 Ga0207683_100546223 250
61 3300026142 Ga0207698_10007919 Ga0207698_100079193 250
62 3300026142 Ga0207698_10499965 Ga0207698_104999651 250
63 3300028379 Ga0268266_10000053 Ga0268266_1000005361 250
64 3300037312 Ga0395899_0001270 Ga0395899_0001270_20069_20857 250
65 3300037418 Ga0395900_0002423 Ga0395900_0002423_15189_15977 250
66 3300037466 Ga0395898_0024509 Ga0395898_0024509_4594_5382 250
67 3300037471 Ga0395905_0001272 Ga0395905_0001272_6698_7486 250
68 3300038443 Ga0395901_0000644 Ga0395901_0000644_8748_9536 250
69 3300031911 Ga0307412_10009032 Ga0307412_100090325 251
70 3300005842 Ga0068858_100488860 Ga0068858_1004888602 252
71 3300025949 Ga0207667_10501279 Ga0207667_105012792 252
72 3300047443 Ga0495687_001100 Ga0495687_001100_1522_2295 252
73 iso_pu_bacteria 2852623160 2852625534 252
74 iso_pu_bacteria 2884933994 2884934538 252
75 iso_pu_bacteria 2890737413 2890740607 252
76 iso_pu_bacteria 2898713307 2898716241 252
77 3300031456 Ga0307513_10173800 Ga0307513_101738002 253
78 iso_pu_bacteria 2738541302 2738852432 253
79 iso_pu_bacteria 2739367663 2739645598 253
80 iso_pu_bacteria 2842903701 2842904975 253
81 iso_pu_bacteria 2857627736 2857632431 253
82 iso_pu_bacteria 2896344016 2896346114 253
83 iso_pu_bacteria 2902048731 2902049714 253
84 iso_pu_bacteria 2904445276 2904447308 253
85 iso_pu_bacteria 2945997725 2945998367 253
86 3300032004 Ga0307414_10152525 Ga0307414_101525252 254
87 iso_pu_bacteria 2738541283 2738756094 254
88 iso_pu_bacteria 2738541284 2738763284 254
89 iso_pu_bacteria 2738543023 2739304179 254
90 iso_pu_bacteria 2775506987 2776616110 254
91 iso_pu_bacteria 2852627209 2852630646 254
92 3300005614 Ga0068856_100015216 Ga0068856_1000152167 255
93 3300006195 Ga0075366_10000929 Ga0075366_1000092912 255
94 3300013296 Ga0157374_10425471 Ga0157374_104254711 255
95 3300025250 Ga0209026_1000304 Ga0209026_100030433 255
96 3300026078 Ga0207702_10020477 Ga0207702_100204774 255
97 3300030744 Ga0316181_1126640 Ga0316181_11266401 255
98 3300032004 Ga0307414_10199171 Ga0307414_101991711 255
99 3300037418 Ga0395900_0009107 Ga0395900_0009107_777_1559 255
100 3300037471 Ga0395905_0000993 Ga0395905_0000993_26990_27772 255
101 3300038443 Ga0395901_0005293 Ga0395901_0005293_5035_5817 255
102 3300047472 Ga0495686_0110750 Ga0495686_0110750_595_1368 255
103 3300050493 nmdc:mga0k408_783_c1 nmdc:mga0k408_783_c1_15327_16100 255
104 3300053086 Ga0500578_0256432 Ga0500578_0256432_144_914 255
105 3300053156 Ga0500622_0003981 Ga0500622_0003981_8728_9501 255
106 iso_pu_bacteria 2599185184 2599482004 255
107 iso_pu_bacteria 2928078545 2928082113 255
108 iso_pu_bacteria 2928147474 2928149309 255
109 iso_pu_bacteria 2932082852 2932087955 255
110 3300002737 JGI25162J39368_1000016 JGI25162J39368_1000016195 256
111 3300003322 rootL2_10087569 rootL2_100875693 256
112 3300004799 Ga0058863_11838219 Ga0058863_118382192 256
113 3300005327 Ga0070658_10020421 Ga0070658_100204213 256
114 3300005329 Ga0070683_100006005 Ga0070683_1000060055 256
115 3300005336 Ga0070680_100013348 Ga0070680_1000133485 256
116 3300005458 Ga0070681_10002959 Ga0070681_1000295913 256
117 3300005530 Ga0070679_100004682 Ga0070679_1000046829 256
118 3300005535 Ga0070684_100016169 Ga0070684_1000161692 256
119 3300006195 Ga0075366_10000170 Ga0075366_100001705 256
120 3300006353 Ga0075370_10074311 Ga0075370_100743112 256
121 3300009545 Ga0105237_10024919 Ga0105237_100249193 256
122 3300009545 Ga0105237_10071114 Ga0105237_100711142 256
123 3300009545 Ga0105237_10071256 Ga0105237_100712562 256
124 3300010375 Ga0105239_10000740 Ga0105239_1000074033 256
125 3300010375 Ga0105239_10077998 Ga0105239_100779982 256
126 3300013100 Ga0157373_10000089 Ga0157373_1000008912 256
127 3300013307 Ga0157372_10003208 Ga0157372_1000320810 256
128 3300017792 Ga0163161_10031315 Ga0163161_100313153 256
129 3300025233 Ga0209437_100119 Ga0209437_100119112 256
130 3300025258 Ga0209129_1011339 Ga0209129_10113392 256
131 3300025909 Ga0207705_10020066 Ga0207705_100200664 256
132 3300025912 Ga0207707_10004330 Ga0207707_100043304 256
133 3300025913 Ga0207695_10315261 Ga0207695_103152612 256
134 3300025914 Ga0207671_10006511 Ga0207671_100065113 256
135 3300025914 Ga0207671_10008823 Ga0207671_100088233 256
136 3300025914 Ga0207671_10028615 Ga0207671_100286153 256
137 3300025944 Ga0207661_10006414 Ga0207661_100064148 256
138 3300028794 Ga0307515_10000316 Ga0307515_1000031685 256
139 3300028794 Ga0307515_10001308 Ga0307515_1000130828 256
140 3300028794 Ga0307515_10048357 Ga0307515_100483573 256
141 3300031548 Ga0307408_100001538 Ga0307408_1000015384 256
142 3300031911 Ga0307412_10001430 Ga0307412_100014304 256
143 3300032004 Ga0307414_10088710 Ga0307414_100887103 256
144 3300033179 Ga0307507_10000337 Ga0307507_1000033719 256
145 3300042014 Ga0439457_010490 Ga0439457_010490_520_1302 256
146 3300046492 Ga0495585_0000658 Ga0495585_0000658_16989_17765 256
147 3300046524 Ga0495648_0004431 Ga0495648_0004431_401_1177 256
148 3300046558 Ga0495633_0000026 Ga0495633_0000026_144616_145479 256
149 3300046616 Ga0495668_0000054 Ga0495668_0000054_113705_114481 256
150 3300046660 Ga0495625_0001227 Ga0495625_0001227_14747_15523 256
151 3300046660 Ga0495625_0003592 Ga0495625_0003592_3064_3840 256
152 3300046665 Ga0495661_0052808 Ga0495661_0052808_945_1721 256
153 3300047472 Ga0495686_0000821 Ga0495686_0000821_39099_39872 256
154 3300050493 nmdc:mga0k408_82_c1 nmdc:mga0k408_82_c1_557_1333 256
155 3300050496 nmdc:mga07m45_64249_c1 nmdc:mga07m45_64249_c1_401_1177 256
156 3300053080 Ga0500635_0061102 Ga0500635_0061102_391_1167 256
157 3300053122 Ga0500608_003416 Ga0500608_003416_5080_5862 256
158 3300053123 Ga0500614_010008 Ga0500614_010008_992_1768 256
159 3300053125 Ga0500618_000018 Ga0500618_000018_120263_121039 256
160 iso_pu_bacteria 2977232053 2977234103 256
161 3300002067 JGI24735J21928_10000015 JGI24735J21928_1000001528 257
162 3300002737 JGI25162J39368_1003245 JGI25162J39368_10032453 257
163 3300002773 JGI25152J39213_1000300 JGI25152J39213_100030020 257
164 3300002774 JGI25150J39212_1000023 JGI25150J39212_100002311 257
165 3300003187 JGI25151J46595_10000082 JGI25151J46595_1000008211 257
166 3300003214 JGI25165J46597_1001134 JGI25165J46597_10011347 257
167 3300003215 JGI25153J46596_10000060 JGI25153J46596_1000006012 257
168 3300003316 rootH1_10004782 rootH1_100047823 257
169 3300003316 rootH1_10013584 rootH1_100135845 257
170 3300003320 rootH2_10012859 rootH2_100128593 257
171 3300003320 rootH2_10069104 rootH2_100691042 257
172 3300005288 Ga0065714_10064439 Ga0065714_100644395 257
173 3300005327 Ga0070658_10000008 Ga0070658_10000008262 257
174 3300005457 Ga0070662_100443118 Ga0070662_1004431181 257
175 3300005458 Ga0070681_10580119 Ga0070681_105801191 257
176 3300005539 Ga0068853_100029060 Ga0068853_1000290601 257
177 3300005539 Ga0068853_100598409 Ga0068853_1005984091 257
178 3300005563 Ga0068855_100000130 Ga0068855_10000013023 257
179 3300005563 Ga0068855_100000393 Ga0068855_1000003936 257
180 3300005563 Ga0068855_100009523 Ga0068855_1000095239 257
181 3300005563 Ga0068855_100048606 Ga0068855_1000486062 257
182 3300005563 Ga0068855_100218901 Ga0068855_1002189013 257
183 3300005563 Ga0068855_100475456 Ga0068855_1004754562 257
184 3300005614 Ga0068856_100000112 Ga0068856_10000011241 257
185 3300005614 Ga0068856_100187767 Ga0068856_1001877673 257
186 3300005616 Ga0068852_100149553 Ga0068852_1001495533 257
187 3300005842 Ga0068858_100407142 Ga0068858_1004071422 257
188 3300006195 Ga0075366_10000799 Ga0075366_100007995 257
189 3300009093 Ga0105240_10000082 Ga0105240_1000008270 257
190 3300009093 Ga0105240_10038249 Ga0105240_100382493 257
191 3300009093 Ga0105240_10112437 Ga0105240_101124372 257
192 3300009093 Ga0105240_10527129 Ga0105240_105271291 257
193 3300009098 Ga0105245_10114311 Ga0105245_101143113 257
194 3300009098 Ga0105245_10888282 Ga0105245_108882821 257
195 3300009174 Ga0105241_10013076 Ga0105241_100130766 257
196 3300009174 Ga0105241_10088234 Ga0105241_100882344 257
197 3300009174 Ga0105241_10524906 Ga0105241_105249061 257
198 3300009545 Ga0105237_10000310 Ga0105237_1000031012 257
199 3300009545 Ga0105237_10005228 Ga0105237_100052285 257
200 3300009545 Ga0105237_10203340 Ga0105237_102033402 257
201 3300010375 Ga0105239_10000166 Ga0105239_100001668 257
202 3300010375 Ga0105239_10003303 Ga0105239_100033039 257
203 3300010375 Ga0105239_10005013 Ga0105239_100050135 257
204 3300010375 Ga0105239_10038256 Ga0105239_100382565 257
205 3300010375 Ga0105239_10182668 Ga0105239_101826682 257
206 3300013102 Ga0157371_10003213 Ga0157371_1000321310 257
207 3300013102 Ga0157371_10029147 Ga0157371_100291473 257
208 3300013102 Ga0157371_10033505 Ga0157371_100335053 257
209 3300013104 Ga0157370_10077492 Ga0157370_100774923 257
210 3300013105 Ga0157369_10000594 Ga0157369_100005946 257
211 3300013105 Ga0157369_10022085 Ga0157369_100220857 257
212 3300013105 Ga0157369_10055728 Ga0157369_100557284 257
213 3300013296 Ga0157374_10019406 Ga0157374_100194062 257
214 3300013297 Ga0157378_10016920 Ga0157378_100169202 257
215 3300013297 Ga0157378_10096044 Ga0157378_100960441 257
216 3300013306 Ga0163162_10000123 Ga0163162_1000012335 257
217 3300013306 Ga0163162_10075378 Ga0163162_100753783 257
218 3300013306 Ga0163162_10351852 Ga0163162_103518522 257
219 3300013307 Ga0157372_10000039 Ga0157372_1000003982 257
220 3300013307 Ga0157372_10001390 Ga0157372_100013909 257
221 3300013308 Ga0157375_10058487 Ga0157375_100584873 257
222 3300013308 Ga0157375_10192537 Ga0157375_101925373 257
223 3300014497 Ga0182008_10000461 Ga0182008_100004613 257
224 3300014497 Ga0182008_10030935 Ga0182008_100309352 257
225 3300014497 Ga0182008_10065175 Ga0182008_100651752 257
226 3300015261 Ga0182006_1000108 Ga0182006_100010871 257
227 3300015261 Ga0182006_1000360 Ga0182006_10003606 257
228 3300015262 Ga0182007_10000024 Ga0182007_1000002435 257
229 3300015262 Ga0182007_10020174 Ga0182007_100201742 257
230 3300015682 Ga0183373_1002 Ga0183373_100236 257
231 3300017792 Ga0163161_10000093 Ga0163161_1000009337 257
232 3300017792 Ga0163161_10000094 Ga0163161_1000009428 257
233 3300020078 Ga0206352_10183235 Ga0206352_101832352 257
234 3300025230 Ga0209563_102233 Ga0209563_1022333 257
235 3300025231 Ga0207427_100122 Ga0207427_10012293 257
236 3300025233 Ga0209437_100048 Ga0209437_100048204 257
237 3300025245 Ga0207425_1000051 Ga0207425_100005145 257
238 3300025250 Ga0209026_1001474 Ga0209026_10014745 257
239 3300025250 Ga0209026_1004480 Ga0209026_10044803 257
240 3300025258 Ga0209129_1000121 Ga0209129_100012112 257
241 3300025261 Ga0209233_1000029 Ga0209233_1000029173 257
242 3300025272 Ga0209455_1018953 Ga0209455_10189531 257
243 3300025294 Ga0209025_1000160 Ga0209025_1000160115 257
244 3300025297 Ga0209758_1000147 Ga0209758_1000147115 257
245 3300025728 Ga0207655_1070140 Ga0207655_10701402 257
246 3300025909 Ga0207705_10000035 Ga0207705_100000353 257
247 3300025911 Ga0207654_10078873 Ga0207654_100788733 257
248 3300025911 Ga0207654_10469292 Ga0207654_104692921 257
249 3300025913 Ga0207695_10000053 Ga0207695_10000053281 257
250 3300025913 Ga0207695_10017987 Ga0207695_100179872 257
251 3300025914 Ga0207671_10000366 Ga0207671_1000036653 257
252 3300025914 Ga0207671_10007345 Ga0207671_100073459 257
253 3300025914 Ga0207671_10031621 Ga0207671_100316216 257
254 3300025927 Ga0207687_10112084 Ga0207687_101120843 257
255 3300025931 Ga0207644_10004990 Ga0207644_100049907 257
256 3300025949 Ga0207667_10000117 Ga0207667_1000011782 257
257 3300025949 Ga0207667_10000274 Ga0207667_1000027431 257
258 3300025949 Ga0207667_10039395 Ga0207667_100393952 257
259 3300026035 Ga0207703_10348936 Ga0207703_103489362 257
260 3300026041 Ga0207639_10035061 Ga0207639_100350613 257
261 3300026078 Ga0207702_10000278 Ga0207702_1000027838 257
262 3300026078 Ga0207702_10839286 Ga0207702_108392861 257
263 3300026121 Ga0207683_10211078 Ga0207683_102110782 257
264 3300026142 Ga0207698_10104392 Ga0207698_101043922 257
265 3300028786 Ga0307517_10000447 Ga0307517_1000044743 257
266 3300028800 Ga0265338_10047663 Ga0265338_100476632 257
267 3300030731 Ga0316177_1001028 Ga0316177_10010283 257
268 3300030732 Ga0316176_1102297 Ga0316176_11022978 257
269 3300030742 Ga0316183_1003890 Ga0316183_100389021 257
270 3300030744 Ga0316181_1131993 Ga0316181_11319933 257
271 3300030744 Ga0316181_1132288 Ga0316181_11322883 257
272 3300031731 Ga0307405_10000011 Ga0307405_1000001130 257
273 3300031903 Ga0307407_10000163 Ga0307407_100001637 257
274 3300031995 Ga0307409_100075761 Ga0307409_1000757612 257
275 3300032002 Ga0307416_100000050 Ga0307416_10000005057 257
276 3300032004 Ga0307414_10016198 Ga0307414_100161984 257
277 3300032004 Ga0307414_10036927 Ga0307414_100369273 257
278 3300032004 Ga0307414_10308451 Ga0307414_103084511 257
279 3300033180 Ga0307510_10001184 Ga0307510_1000118422 257
280 3300037312 Ga0395899_0000027 Ga0395899_0000027_181179_181955 257
281 3300037312 Ga0395899_0000282 Ga0395899_0000282_46519_47307 257
282 3300037418 Ga0395900_0000195 Ga0395900_0000195_49827_50615 257
283 3300039447 Ga0436361_1126675 Ga0436361_1126675_4726_5514 257
284 3300044684 Ga0466966_0008901 Ga0466966_0008901_4657_5445 257
285 3300046471 Ga0495650_0000144 Ga0495650_0000144_125801_126595 257
286 3300046474 Ga0495605_0127124 Ga0495605_0127124_58_852 257
287 3300046492 Ga0495585_0000091 Ga0495585_0000091_41256_42050 257
288 3300046506 Ga0495583_0028585 Ga0495583_0028585_1535_2329 257
289 3300046507 Ga0495606_0000919 Ga0495606_0000919_28117_28911 257
290 3300046512 Ga0495610_0000219 Ga0495610_0000219_44936_45724 257
291 3300046512 Ga0495610_0002599 Ga0495610_0002599_2146_2934 257
292 3300046512 Ga0495610_0007529 Ga0495610_0007529_1898_2692 257
293 3300046520 Ga0495637_0040482 Ga0495637_0040482_89_883 257
294 3300046523 Ga0495644_0007582 Ga0495644_0007582_722_1516 257
295 3300046524 Ga0495648_0068494 Ga0495648_0068494_363_1145 257
296 3300046528 Ga0495642_0088048 Ga0495642_0088048_272_1066 257
297 3300046660 Ga0495625_0000059 Ga0495625_0000059_50169_50963 257
298 3300046660 Ga0495625_0014323 Ga0495625_0014323_2588_3367 257
299 3300046660 Ga0495625_0107515 Ga0495625_0107515_146_931 257
300 3300046660 Ga0495625_0210892 Ga0495625_0210892_32_826 257
301 3300046660 Ga0495625_0213348 Ga0495625_0213348_445_1233 257
302 3300046665 Ga0495661_0018331 Ga0495661_0018331_116_910 257
303 3300046691 Ga0495670_0137944 Ga0495670_0137944_240_1034 257
304 3300046692 Ga0495671_0044835 Ga0495671_0044835_455_1249 257
305 3300046694 Ga0495649_0000031 Ga0495649_0000031_22881_23675 257
306 3300046810 Ga0495660_0047165 Ga0495660_0047165_187_981 257
307 3300047323 Ga0495683_0041549 Ga0495683_0041549_70_858 257
308 3300047469 Ga0495673_0038717 Ga0495673_0038717_130_924 257
309 3300047470 Ga0495681_0130667 Ga0495681_0130667_229_1023 257
310 3300047472 Ga0495686_0000621 Ga0495686_0000621_6383_7162 257
311 3300048917 Ga0496114_0134149 Ga0496114_0134149_267_1040 257
312 3300049459 Ga0495678_009963 Ga0495678_009963_2422_3207 257
313 3300050493 nmdc:mga0k408_1202_c1 nmdc:mga0k408_1202_c1_776_1570 257
314 3300053122 Ga0500608_007715 Ga0500608_007715_851_1639 257
315 3300053130 Ga0500642_0075691 Ga0500642_0075691_247_1026 257
316 iso_pu_bacteria 2585427687 2586209942 257
317 iso_pu_bacteria 2818991437 2819549552 257
318 iso_pu_bacteria 2842722452 2842727312 257
319 iso_pu_bacteria 2842909656 2842914921 257
320 iso_pu_bacteria 2849281842 2849285461 257
321 iso_pu_bacteria 2954016120 2954020835 257
322 iso_pu_bacteria 3003233435 3003234007 257
323 iso_pu_bacteria 8055588893 8055589933 257
324 2162886007 SwRhRL2b_contig_2712303 SwRhRL2b_0469.00004350 258
325 3300005288 Ga0065714_10002553 Ga0065714_100025538 258
326 3300005288 Ga0065714_10038700 Ga0065714_100387002 258
327 3300005289 Ga0065704_10074918 Ga0065704_100749184 258
328 3300009545 Ga0105237_10000394 Ga0105237_1000039463 258
329 3300013100 Ga0157373_10005698 Ga0157373_100056983 258
330 3300013100 Ga0157373_10081362 Ga0157373_100813623 258
331 3300013102 Ga0157371_10006312 Ga0157371_100063123 258
332 3300013102 Ga0157371_10488495 Ga0157371_104884951 258
333 3300013104 Ga0157370_10002659 Ga0157370_100026597 258
334 3300013104 Ga0157370_10037726 Ga0157370_100377264 258
335 3300013104 Ga0157370_10180705 Ga0157370_101807052 258
336 3300014497 Ga0182008_10000020 Ga0182008_10000020156 258
337 3300014497 Ga0182008_10000170 Ga0182008_1000017015 258
338 3300015261 Ga0182006_1000270 Ga0182006_100027011 258
339 3300015261 Ga0182006_1004894 Ga0182006_10048941 258
340 3300015261 Ga0182006_1106386 Ga0182006_11063861 258
341 3300015262 Ga0182007_10058727 Ga0182007_100587271 258
342 3300017792 Ga0163161_10001465 Ga0163161_1000146511 258
343 3300025914 Ga0207671_10000925 Ga0207671_1000092535 258
344 3300031911 Ga0307412_10000001 Ga0307412_10000001239 258
345 3300032004 Ga0307414_10005075 Ga0307414_100050755 258
346 3300032004 Ga0307414_10048868 Ga0307414_100488682 258
347 3300048925 Ga0496122_0000876 Ga0496122_0000876_53062_53844 258
348 3300048926 Ga0496123_0012651 Ga0496123_0012651_877_1659 258
349 3300048928 Ga0496125_0083624 Ga0496125_0083624_376_1158 258
350 3300053093 Ga0500651_0001126 Ga0500651_0001126_8773_9549 258

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11306

DUF3108

Protein of unknown function (DUF3108)

40

279

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
8aim-assembly2.cif.gz_G ugi-2 saung complex 0.6769 196 239
6edx-assembly1.cif.gz_A crystal structure of sgk3 px domain 0.636 178 221
6ntr-assembly2.cif.gz_B crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.6353 27 248
6ntr-assembly4.cif.gz_D crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.6302 34 248
6ntr-assembly1.cif.gz_A crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.62 34 248
ID Description Score Start End Superfamily
af_P9WM73_75_221_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.5323 157 244 3.30.530.20
4oqeB02 Mainly Beta;Single Sheet;S-adenosyl-L-methionine-dependent methyltransferases;CAC2371-like domains 0.5013 30 96 2.20.130.10
af_P34685_112_256_3.90.1150.210 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;F-actin capping protein, beta subunit 0.5013 50 134 3.90.1150.210
af_Q5A893_109_250_3.90.1150.210 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;F-actin capping protein, beta subunit 0.4971 50 134 3.90.1150.210
3fzxA00 Mainly Beta;Beta Barrel;YmcC-like fold; 0.4872 23 248 2.40.360.20
ID Description Score Start End GO Terms
AF-A0A519VW40-F1-model_v4 DUF3108 domain-containing protein 0.9884 27 257
AF-A0A519VW40-F1-model_v4 DUF3108 domain-containing protein 0.9842 27 257
AF-A0A1T5EAL8-F1-model_v4 DUF3108 domain-containing protein 0.9746 19 254
AF-A0A519NKJ9-F1-model_v4 deleted 0.968 11 198
AF-A0A7W1UC99-F1-model_v4 DUF3108 domain-containing protein 0.962 30 129

Feature Viewer

pLDDT pTM Quality
89.19 0.84 High
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Predicted Structure (AlphaFold2)

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