F418055

General Info

Members Datasets Scaffolds Average Seq Length
349 219 698 243

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0000523|Ga0500616_0000523_14383_15180
Length 265
Sequence VASLYLNESLHPDAFEVGRRLPVVGADARHATQVARIRTGERVAVGDGRGRLAWGPVSHIGQGEFAITAEDLVIEVPRLPRLVLVQALAKGDRDELAIQAATELGVDAVVPWQAARSVSKWDGPKIAKGLERWRAVVREASKQAIRPTVPEVLDLLDTKSLLRSLGDEGALRLAALPQEPRPSESKGLTLVLEPTAQHSLASQLPVTGIDTITLIVGPEGGISIEELLLLDAAGAVPVRLGTEVLRTSTAGPAALAAIAVILDRW

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
6 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
46 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
47 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
68 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
69 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
70 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
84 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
85 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
86 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
87 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
88 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
89 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
90 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
91 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
92 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
93 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
94 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
95 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
96 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
97 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
98 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
99 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
100 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
101 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
102 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
107 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
108 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
109 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
112 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
113 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
114 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
115 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
121 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
122 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
123 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
124 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
127 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
128 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
129 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
132 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
133 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
142 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
146 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
150 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
153 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
154 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
164 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
165 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
166 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
169 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
170 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
171 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
172 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
173 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
174 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
175 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
177 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
178 2643221549 Agromyces sp. Root1464 Isolate Unclassified
179 2643221572 Leifsonia sp. Root60 Isolate Unclassified
180 2643221616 Leifsonia sp. Root227 Isolate Unclassified
181 2643221619 Agromyces sp. Root81 Isolate Unclassified
182 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
183 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
184 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
185 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
186 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
187 2808606372 Agromyces sp. 23-23 Isolate Unclassified
188 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
189 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
190 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
191 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
192 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
193 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
194 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
195 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
196 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
197 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
198 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
199 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
200 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
201 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
202 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
203 2919069694 Microbacterium sp. 1154 Isolate Unclassified
204 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
205 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
206 2928153084 Leifsonia sp. 563 Isolate Unclassified
207 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
208 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
209 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
210 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
211 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
212 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
213 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
214 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
215 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
216 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
217 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
218 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
219 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.11
Metatranscriptomes 0.57
Isolates 12.32

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 12.89
Nodule 0
Rhizoplane 14.61
Rhizosphere 54.73
Stem 0
Stem Tuber 0.29
Unclassified 0.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0000523 3300053153 Bacteria 48569
2 LJQas_1001962 3300000549 Bacteria 2969
3 JGI25164J39214_1000488 3300002772 Bacteria 19505
4 JGI25165J46597_1000002 3300003214 Bacteria 765387
5 Ga0055539_1000008 3300003752 Bacteria 537665
6 Ga0055533_1000001 3300003756 Bacteria 1863437
7 Ga0055525_1000221 3300003759 Bacteria 62301
8 Ga0055525_1000365 3300003759 Bacteria 30386
9 Ga0055527_1000001 3300003760 Bacteria 850044
10 Ga0055529_1000018 3300003763 Bacteria 344344
11 Ga0055541_1014135 3300003841 Bacteria 1094
12 Ga0065714_10018880 3300005288 Bacteria 1818
13 Ga0070658_10479134 3300005327 Bacteria 1074
14 Ga0070676_10042620 3300005328 Bacteria 2636
15 Ga0070666_10271476 3300005335 Bacteria 1204
16 Ga0070682_100061497 3300005337 Bacteria 2377
17 Ga0070668_100060018 3300005347 Bacteria 2944
18 Ga0070668_100218457 3300005347 Bacteria 1571
19 Ga0070675_100130388 3300005354 Bacteria 2142
20 Ga0070674_100304707 3300005356 Bacteria 1271
21 Ga0070710_10008332 3300005437 Bacteria 5045
22 Ga0070662_100569942 3300005457 Bacteria 950
23 Ga0070684_100442118 3300005535 Unclassified 1201
24 Ga0070672_100024333 3300005543 Bacteria 4473
25 Ga0068870_10052845 3300005840 Bacteria 2156
26 Ga0075365_10015785 3300006038 Bacteria 4575
27 Ga0075365_10032526 3300006038 Bacteria 3354
28 Ga0075365_10415415 3300006038 Bacteria 950
29 Ga0075363_100000687 3300006048 Bacteria 11406
30 Ga0075364_10012056 3300006051 Bacteria 5273
31 Ga0075364_10138468 3300006051 Bacteria 1636
32 Ga0075432_10001224 3300006058 Bacteria 8258
33 Ga0075369_10003127 3300006186 Bacteria 5996
34 Ga0105251_10068856 3300009011 Bacteria 1651
35 Ga0105244_10122674 3300009036 Bacteria 1258
36 Ga0105244_10164455 3300009036 Bacteria 1058
37 Ga0105243_10117530 3300009148 Bacteria 2236
38 Ga0105243_10613106 3300009148 Bacteria 1049
39 Ga0105246_10149587 3300011119 Bacteria 1766
40 Ga0157371_10271967 3300013102 Bacteria 1223
41 Ga0157369_10023995 3300013105 Bacteria 6785
42 Ga0157369_10051597 3300013105 Bacteria 4451
43 Ga0157369_10407225 3300013105 Bacteria 1411
44 Ga0163162_10007647 3300013306 Bacteria 10526
45 Ga0163162_10588589 3300013306 Bacteria 1239
46 Ga0157372_10049948 3300013307 Bacteria 4653
47 Ga0157372_10430125 3300013307 Bacteria 1538
48 Ga0157375_10046356 3300013308 Bacteria 4237
49 Ga0157375_11031551 3300013308 Bacteria 961
50 Ga0157380_10005061 3300014326 Bacteria 9201
51 Ga0157380_10072375 3300014326 Bacteria 2792
52 Ga0206354_10670039 3300020081 Bacteria 5307
53 Ga0206353_10424351 3300020082 Bacteria 7998
54 Ga0209566_100026 3300025225 Bacteria 367457
55 Ga0209674_100001 3300025226 Bacteria 4013750
56 Ga0209672_100006 3300025228 Bacteria 1004497
57 Ga0209563_100001 3300025230 Bacteria 4013775
58 Ga0209563_101204 3300025230 Bacteria 7232
59 Ga0207427_100124 3300025231 Bacteria 98217
60 Ga0209437_100926 3300025233 Bacteria 11130
61 Ga0209258_104416 3300025242 Bacteria 2673
62 Ga0209677_100001 3300025253 Bacteria 4013787
63 Ga0209677_107237 3300025253 Bacteria 2409
64 Ga0209148_1000015 3300025254 Bacteria 850103
65 Ga0209233_1000001 3300025261 Bacteria 2992747
66 Ga0209455_1000013 3300025272 Bacteria 850103
67 Ga0209455_1000727 3300025272 Bacteria 18961
68 Ga0207697_10082394 3300025315 Bacteria 1356
69 Ga0207655_1006773 3300025728 Bacteria 7538
70 Ga0207655_1019514 3300025728 Bacteria 3537
71 Ga0207692_10054680 3300025898 Bacteria 2040
72 Ga0207645_10007077 3300025907 Bacteria 7978
73 Ga0207643_10033206 3300025908 Bacteria 2887
74 Ga0207705_10142045 3300025909 Bacteria 1794
75 Ga0207650_10437977 3300025925 Bacteria 1086
76 Ga0207659_10165301 3300025926 Bacteria 1741
77 Ga0207709_10075023 3300025935 Bacteria 2160
78 Ga0207709_10091585 3300025935 Bacteria 1988
79 Ga0207709_10105481 3300025935 Bacteria 1873
80 Ga0207669_10230899 3300025937 Bacteria 1365
81 Ga0207691_10001815 3300025940 Bacteria 20880
82 Ga0207668_10290988 3300025972 Bacteria 1344
83 Ga0207428_10005524 3300027907 Bacteria 11779
84 Ga0268266_10175293 3300028379 Bacteria 1949
85 Ga0268265_10049139 3300028380 Bacteria 3171
86 Ga0307515_10028962 3300028794 Bacteria 9384
87 Ga0307515_10278308 3300028794 Bacteria 1384
88 Ga0307515_10521945 3300028794 Bacteria 797
89 Ga0307408_100012515 3300031548 Bacteria 5624
90 Ga0307514_10040977 3300031649 Bacteria 3648
91 Ga0307405_10047438 3300031731 Bacteria 2645
92 Ga0307410_10000928 3300031852 Bacteria 12536
93 Ga0307410_10173520 3300031852 Bacteria 1627
94 Ga0307410_10251024 3300031852 Bacteria 1375
95 Ga0307407_10006386 3300031903 Bacteria 5230
96 Ga0307407_10184285 3300031903 Bacteria 1386
97 Ga0307412_10086891 3300031911 Bacteria 2177
98 Ga0307409_100003040 3300031995 Bacteria 8967
99 Ga0307409_100430407 3300031995 Bacteria 1268
100 Ga0307416_100004371 3300032002 Bacteria 8508
101 Ga0307416_100768573 3300032002 Bacteria 1057
102 Ga0307414_10115513 3300032004 Bacteria 2053
103 Ga0307414_10120659 3300032004 Bacteria 2015
104 Ga0307415_100110496 3300032126 Bacteria 2039
105 Ga0307415_100263385 3300032126 Bacteria 1408
106 Ga0395899_0000786 3300037312 Bacteria 31058
107 Ga0395899_0007238 3300037312 Bacteria 8590
108 Ga0395899_0012043 3300037312 Bacteria 6627
109 Ga0395900_0002187 3300037418 Bacteria 21855
110 Ga0395900_0022030 3300037418 Bacteria 6516
111 Ga0395900_0066325 3300037418 Bacteria 3709
112 Ga0395900_0382882 3300037418 Bacteria 1374
113 Ga0395898_0000752 3300037466 Bacteria 56634
114 Ga0395898_0025398 3300037466 Bacteria 5970
115 Ga0395898_0064733 3300037466 Bacteria 3545
116 Ga0395898_0153188 3300037466 Bacteria 2205
117 Ga0395898_0216730 3300037466 Bacteria 1826
118 Ga0395905_0032276 3300037471 Bacteria 4925
119 Ga0395901_0009610 3300038443 Bacteria 9813
120 Ga0395901_0142834 3300038443 Bacteria 2516
121 Ga0395901_0168949 3300038443 Bacteria 2295
122 Ga0439436_0009026 3300041404 Bacteria 3057
123 Ga0439436_0011651 3300041404 Bacteria 2671
124 Ga0439439_0011440 3300041406 Bacteria 2135
125 Ga0439466_0045192 3300041411 Bacteria 1457
126 Ga0439465_0035023 3300041413 Bacteria 1609
127 Ga0439465_0060203 3300041413 Bacteria 1257
128 Ga0439433_0000354 3300041999 Bacteria 8125
129 Ga0439442_000197 3300042002 Bacteria 15350
130 Ga0439442_000617 3300042002 Bacteria 7662
131 Ga0439445_0070093 3300042004 Bacteria 969
132 Ga0439449_0001412 3300042007 Bacteria 9388
133 Ga0439457_003243 3300042014 Bacteria 4468
134 Ga0450923_055593 3300042125 Bacteria 857
135 Ga0439434_0012740 3300042435 Bacteria 2491
136 Ga0466969_0039388 3300044656 Bacteria 2374
137 Ga0466972_0033988 3300044658 Bacteria 2500
138 Ga0466972_0061739 3300044658 Bacteria 1797
139 Ga0466965_0007154 3300044683 Bacteria 5113
140 Ga0466965_0026194 3300044683 Bacteria 2826
141 Ga0466965_0174685 3300044683 Bacteria 1131
142 Ga0466966_0016441 3300044684 Bacteria 4888
143 Ga0466961_0010396 3300044693 Bacteria 5939
144 Ga0466961_0150065 3300044693 Bacteria 1455
145 Ga0466971_0081327 3300044719 Bacteria 1477
146 Ga0466971_0165256 3300044719 Bacteria 1037
147 Ga0466968_0074900 3300044735 Bacteria 1479
148 Ga0466970_0162238 3300044765 Bacteria 1236
149 Ga0466960_0059032 3300044901 Bacteria 1875
150 Ga0466960_0131241 3300044901 Bacteria 1322
151 Ga0495653_0011993 3300046463 Bacteria 7078
152 Ga0495580_0039751 3300046472 Bacteria 3365
153 Ga0495580_0082314 3300046472 Bacteria 2243
154 Ga0495582_0209333 3300046473 Bacteria 1114
155 Ga0495639_0001841 3300046475 Bacteria 9384
156 Ga0495662_0004981 3300046476 Bacteria 6652
157 Ga0495664_0006610 3300046477 Bacteria 6411
158 Ga0495594_0047195 3300046499 Bacteria 2365
159 Ga0495594_0106752 3300046499 Bacteria 1577
160 Ga0495630_0006154 3300046517 Bacteria 8509
161 Ga0495631_0073329 3300046518 Bacteria 1478
162 Ga0495643_0124303 3300046522 Bacteria 1301
163 Ga0495663_0072280 3300046525 Bacteria 1100
164 Ga0495642_0021175 3300046528 Bacteria 2556
165 Ga0495642_0043051 3300046528 Bacteria 1841
166 Ga0495665_0000673 3300046531 Bacteria 17513
167 Ga0495586_0000749 3300046535 Bacteria 18670
168 Ga0495586_0005339 3300046535 Bacteria 6874
169 Ga0495587_0001807 3300046536 Bacteria 14283
170 Ga0495645_0000701 3300046543 Bacteria 22950
171 Ga0495667_0000729 3300046559 Bacteria 21083
172 Ga0495656_0000723 3300046615 Bacteria 10666
173 Ga0495656_0026853 3300046615 Bacteria 2295
174 Ga0495659_0049784 3300046664 Bacteria 1522
175 Ga0495588_0009017 3300046674 Bacteria 4596
176 Ga0495588_0034903 3300046674 Bacteria 2546
177 Ga0495588_0036037 3300046674 Bacteria 2508
178 Ga0495588_0151071 3300046674 Bacteria 1227
179 Ga0495657_0021096 3300046675 Bacteria 4678
180 Ga0495623_0014645 3300046679 Bacteria 5073
181 Ga0495613_0279434 3300046689 Bacteria 1160
182 Ga0495670_0001235 3300046691 Bacteria 12458
183 Ga0495670_0067287 3300046691 Bacteria 1808
184 Ga0495600_0001185 3300046809 Bacteria 14262
185 Ga0495600_0037666 3300046809 Bacteria 3145
186 Ga0495581_0000756 3300047315 Bacteria 17150
187 Ga0495581_0001481 3300047315 Bacteria 13073
188 Ga0495581_0102250 3300047315 Bacteria 1665
189 Ga0495636_0021304 3300047318 Bacteria 2617
190 Ga0495672_0039725 3300047320 Bacteria 2859
191 Ga0495681_0137475 3300047470 Bacteria 1035
192 Ga0496100_0445298 3300048903 Bacteria 992
193 Ga0496101_0016590 3300048904 Bacteria 4980
194 Ga0496102_0009619 3300048905 Bacteria 8313
195 Ga0496102_0036787 3300048905 Bacteria 4412
196 Ga0496102_0053218 3300048905 Bacteria 3690
197 Ga0496102_0162082 3300048905 Bacteria 2104
198 Ga0496102_0162445 3300048905 Bacteria 2101
199 Ga0496102_0269853 3300048905 Bacteria 1604
200 Ga0496102_0375611 3300048905 Bacteria 1338
201 Ga0496102_0858907 3300048905 Bacteria 829
202 Ga0496103_0005076 3300048906 Bacteria 7931
203 Ga0496103_0019931 3300048906 Bacteria 4028
204 Ga0496103_0273120 3300048906 Bacteria 1087
205 Ga0496103_0335841 3300048906 Bacteria 972
206 Ga0496105_0005304 3300048908 Bacteria 9771
207 Ga0496105_0020315 3300048908 Bacteria 5366
208 Ga0496105_0040285 3300048908 Bacteria 3851
209 Ga0496105_0330201 3300048908 Bacteria 1221
210 Ga0496106_0023522 3300048909 Bacteria 4577
211 Ga0496106_0163261 3300048909 Bacteria 1762
212 Ga0496107_0013613 3300048910 Bacteria 5686
213 Ga0496107_0157438 3300048910 Bacteria 1682
214 Ga0496107_0399285 3300048910 Bacteria 1022
215 Ga0496108_0030151 3300048911 Bacteria 4495
216 Ga0496108_0047195 3300048911 Bacteria 3600
217 Ga0496108_0149612 3300048911 Bacteria 2014
218 Ga0496108_0360135 3300048911 Bacteria 1269
219 Ga0496109_0110873 3300048912 Bacteria 2551
220 Ga0496109_0119114 3300048912 Bacteria 2458
221 Ga0496109_0340789 3300048912 Bacteria 1415
222 Ga0496109_0560599 3300048912 Bacteria 1077
223 Ga0496110_0028363 3300048913 Bacteria 4808
224 Ga0496110_0032854 3300048913 Bacteria 4485
225 Ga0496110_0051394 3300048913 Bacteria 3621
226 Ga0496110_0390442 3300048913 Bacteria 1268
227 Ga0496111_0093659 3300048914 Bacteria 2202
228 Ga0496111_0310982 3300048914 Bacteria 1167
229 Ga0496111_0336985 3300048914 Bacteria 1117
230 Ga0496113_0111658 3300048916 Bacteria 2129
231 Ga0496113_0329304 3300048916 Bacteria 1225
232 Ga0496113_0383096 3300048916 Bacteria 1129
233 Ga0496113_0516885 3300048916 Bacteria 958
234 Ga0496114_0022362 3300048917 Bacteria 5153
235 Ga0496114_0026731 3300048917 Bacteria 4727
236 Ga0496114_0056768 3300048917 Bacteria 3267
237 Ga0496114_0187878 3300048917 Bacteria 1806
238 Ga0496114_0356182 3300048917 Bacteria 1294
239 Ga0496115_0016504 3300048918 Bacteria 5624
240 Ga0496115_0079699 3300048918 Bacteria 2665
241 Ga0496115_0315755 3300048918 Bacteria 1279
242 Ga0496115_0403797 3300048918 Bacteria 1108
243 Ga0496116_0014171 3300048919 Bacteria 6381
244 Ga0496116_0038675 3300048919 Bacteria 3309
245 Ga0496117_0000053 3300048920 Bacteria 279396
246 Ga0496117_0011044 3300048920 Bacteria 8131
247 Ga0496117_0033769 3300048920 Bacteria 3864
248 Ga0496117_0087833 3300048920 Bacteria 2013
249 Ga0496117_0105418 3300048920 Bacteria 1772
250 Ga0496117_0239429 3300048920 Bacteria 997
251 Ga0496117_0250443 3300048920 Bacteria 966
252 Ga0496118_0006827 3300048921 Bacteria 12384
253 Ga0496119_0001250 3300048922 Bacteria 31590
254 Ga0496119_0001577 3300048922 Bacteria 27122
255 Ga0496119_0009577 3300048922 Bacteria 8277
256 Ga0496119_0019101 3300048922 Bacteria 5065
257 Ga0496119_0026129 3300048922 Bacteria 4056
258 Ga0496120_0001014 3300048923 Bacteria 37596
259 Ga0496120_0001497 3300048923 Bacteria 27661
260 Ga0496120_0007507 3300048923 Bacteria 8097
261 Ga0496122_0000030 3300048925 Bacteria 331586
262 Ga0496122_0000360 3300048925 Bacteria 97913
263 Ga0496122_0008304 3300048925 Bacteria 11255
264 Ga0496123_0000024 3300048926 Bacteria 331587
265 Ga0496123_0002859 3300048926 Bacteria 20356
266 Ga0496123_0006394 3300048926 Bacteria 11429
267 Ga0496124_0015329 3300048927 Bacteria 7355
268 Ga0496124_0192391 3300048927 Bacteria 1559
269 Ga0496124_0257088 3300048927 Bacteria 1288
270 Ga0496125_0003229 3300048928 Bacteria 20099
271 Ga0496125_0024493 3300048928 Bacteria 5549
272 Ga0496125_0100377 3300048928 Bacteria 2134
273 Ga0496126_0041788 3300048929 Bacteria 4240
274 Ga0496126_0088821 3300048929 Bacteria 2721
275 Ga0496126_0219861 3300048929 Bacteria 1596
276 Ga0501033_0025326 3300049570 Bacteria 4468
277 Ga0501033_0234216 3300049570 Bacteria 1304
278 Ga0501039_0161827 3300049575 Bacteria 1759
279 Ga0501042_0003175 3300049578 Bacteria 10247
280 Ga0501047_0053701 3300049581 Bacteria 3897
281 Ga0501070_0000088 3300049586 Bacteria 77423
282 Ga0501070_0000835 3300049586 Bacteria 28002
283 Ga0501070_0005761 3300049586 Bacteria 10565
284 Ga0501073_0000391 3300049589 Bacteria 29750
285 Ga0501080_0013739 3300049742 Bacteria 7455
286 Ga0501080_0137657 3300049742 Bacteria 2259
287 Ga0501080_0308195 3300049742 Bacteria 1435
288 Ga0501083_0000052 3300049744 Bacteria 84349
289 Ga0501083_0008309 3300049744 Bacteria 7341
290 Ga0501035_0127595 3300049822 Bacteria 2220
291 nmdc:mga00v17_103063_c1 3300050491 Bacteria 1803
292 nmdc:mga00v17_179766_c1 3300050491 Bacteria 1365
293 nmdc:mga0yw44_14443_c1 3300050492 Bacteria 4194
294 nmdc:mga0yw44_159389_c2 3300050492 Bacteria 879
295 nmdc:mga0yw44_268555_c1 3300050492 Bacteria 1138
296 nmdc:mga08y16_481709_c1 3300050511 Bacteria 1262
297 Ga0500635_0000013 3300053080 Bacteria 133088
298 Ga0500643_000487 3300053087 Bacteria 28865
299 Ga0500556_0000239 3300053104 Bacteria 44477
300 Ga0500562_000806 3300053108 Bacteria 7648
301 Ga0500593_011188 3300053117 Bacteria 3784
302 Ga0500655_001670 3300053133 Bacteria 4181
303 Ga0500559_0000156 3300053136 Bacteria 53941
304 Ga0500573_0058187 3300053140 Bacteria 2216
305 Ga0500616_0021151 3300053153 Bacteria 3652
306 Ga0466962_0081532 3300061719 Bacteria 1547
307 2588108537 2585428157 Bacteria 3018951
308 2643767470 2643221549 Bacteria 4042819
309 2643875441 2643221572 Bacteria 3614809
310 2644095941 2643221616 Bacteria 4066575
311 2644110731 2643221619 Bacteria 4158469
312 2644382496 2643221669 Bacteria 3611286
313 2723642353 2721755702 Bacteria 4373124
314 2758226087 2757320536 Bacteria 3629334
315 2774380331 2773857758 Bacteria 3592392
316 2808631156 2808606306 Bacteria 3608896
317 2808902328 2808606372 Bacteria 4649509
318 2809227470 2808606447 Bacteria 3572005
319 2812323151 2811994872 Bacteria 4121241
320 2844842346 2844841374 Bacteria 3917147
321 2852634231 2852632344 Bacteria 3463163
322 2852645699 2852643534 Bacteria 3013378
323 2857720264 2857720070 Bacteria 3189373
324 2857735893 2857733635 Bacteria 3532004
325 2870630396 2870628048 Bacteria 3696012
326 2884765304 2884763398 Bacteria 4091164
327 2895661531 2895660088 Bacteria 3782833
328 2904511955 2904509784 Bacteria 3520416
329 2904777477 2904776348 Bacteria 4658726
330 2908680872 2908678064 Bacteria 3482747
331 2919051336 2919051321 Bacteria 4210889
332 2919057994 2919055335 Bacteria 3875751
333 2919071578 2919069694 Bacteria 3622919
334 2919524387 2919523602 Bacteria 3788128
335 2928091898 2928090899 Bacteria 3158267
336 2928155991 2928153084 Bacteria 4020257
337 2935412734 2935409751 Bacteria 4179611
338 2939664001 2939660829 Bacteria 3784848
339 2966925037 2966924647 Bacteria 3268643
340 2974297226 2974294766 Bacteria 3767688
341 2974326540 2974324384 Bacteria 3750535
342 2977231461 2977228692 Bacteria 3450105
343 2977240235 2977236895 Bacteria 3569373
344 2977266670 2977264416 Bacteria 3750737
345 2984545487 2984542743 Bacteria 3569378
346 2984581340 2984580707 Bacteria 3351387
347 8016257508 8016254467 Bacteria 3797036
348 8045831625 8045830549 Bacteria 4444727
349 8054107749 8054107350 Bacteria 5022511
350 Ga0500616_0000523
351 LJQas_1001962
352 JGI25164J39214_1000488
353 JGI25165J46597_1000002
354 Ga0055539_1000008
355 Ga0055533_1000001
356 Ga0055525_1000221
357 Ga0055525_1000365
358 Ga0055527_1000001
359 Ga0055529_1000018
360 Ga0055541_1014135
361 Ga0065714_10018880
362 Ga0070658_10479134
363 Ga0070676_10042620
364 Ga0070666_10271476
365 Ga0070682_100061497
366 Ga0070668_100060018
367 Ga0070668_100218457
368 Ga0070675_100130388
369 Ga0070674_100304707
370 Ga0070710_10008332
371 Ga0070662_100569942
372 Ga0070684_100442118
373 Ga0070672_100024333
374 Ga0068870_10052845
375 Ga0075365_10015785
376 Ga0075365_10032526
377 Ga0075365_10415415
378 Ga0075363_100000687
379 Ga0075364_10012056
380 Ga0075364_10138468
381 Ga0075432_10001224
382 Ga0075369_10003127
383 Ga0105251_10068856
384 Ga0105244_10122674
385 Ga0105244_10164455
386 Ga0105243_10117530
387 Ga0105243_10613106
388 Ga0105246_10149587
389 Ga0157371_10271967
390 Ga0157369_10023995
391 Ga0157369_10051597
392 Ga0157369_10407225
393 Ga0163162_10007647
394 Ga0163162_10588589
395 Ga0157372_10049948
396 Ga0157372_10430125
397 Ga0157375_10046356
398 Ga0157375_11031551
399 Ga0157380_10005061
400 Ga0157380_10072375
401 Ga0206354_10670039
402 Ga0206353_10424351
403 Ga0209566_100026
404 Ga0209674_100001
405 Ga0209672_100006
406 Ga0209563_100001
407 Ga0209563_101204
408 Ga0207427_100124
409 Ga0209437_100926
410 Ga0209258_104416
411 Ga0209677_100001
412 Ga0209677_107237
413 Ga0209148_1000015
414 Ga0209233_1000001
415 Ga0209455_1000013
416 Ga0209455_1000727
417 Ga0207697_10082394
418 Ga0207655_1006773
419 Ga0207655_1019514
420 Ga0207692_10054680
421 Ga0207645_10007077
422 Ga0207643_10033206
423 Ga0207705_10142045
424 Ga0207650_10437977
425 Ga0207659_10165301
426 Ga0207709_10075023
427 Ga0207709_10091585
428 Ga0207709_10105481
429 Ga0207669_10230899
430 Ga0207691_10001815
431 Ga0207668_10290988
432 Ga0207428_10005524
433 Ga0268266_10175293
434 Ga0268265_10049139
435 Ga0307515_10028962
436 Ga0307515_10278308
437 Ga0307515_10521945
438 Ga0307408_100012515
439 Ga0307514_10040977
440 Ga0307405_10047438
441 Ga0307410_10000928
442 Ga0307410_10173520
443 Ga0307410_10251024
444 Ga0307407_10006386
445 Ga0307407_10184285
446 Ga0307412_10086891
447 Ga0307409_100003040
448 Ga0307409_100430407
449 Ga0307416_100004371
450 Ga0307416_100768573
451 Ga0307414_10115513
452 Ga0307414_10120659
453 Ga0307415_100110496
454 Ga0307415_100263385
455 Ga0395899_0000786
456 Ga0395899_0007238
457 Ga0395899_0012043
458 Ga0395900_0002187
459 Ga0395900_0022030
460 Ga0395900_0066325
461 Ga0395900_0382882
462 Ga0395898_0000752
463 Ga0395898_0025398
464 Ga0395898_0064733
465 Ga0395898_0153188
466 Ga0395898_0216730
467 Ga0395905_0032276
468 Ga0395901_0009610
469 Ga0395901_0142834
470 Ga0395901_0168949
471 Ga0439436_0009026
472 Ga0439436_0011651
473 Ga0439439_0011440
474 Ga0439466_0045192
475 Ga0439465_0035023
476 Ga0439465_0060203
477 Ga0439433_0000354
478 Ga0439442_000197
479 Ga0439442_000617
480 Ga0439445_0070093
481 Ga0439449_0001412
482 Ga0439457_003243
483 Ga0450923_055593
484 Ga0439434_0012740
485 Ga0466969_0039388
486 Ga0466972_0033988
487 Ga0466972_0061739
488 Ga0466965_0007154
489 Ga0466965_0026194
490 Ga0466965_0174685
491 Ga0466966_0016441
492 Ga0466961_0010396
493 Ga0466961_0150065
494 Ga0466971_0081327
495 Ga0466971_0165256
496 Ga0466968_0074900
497 Ga0466970_0162238
498 Ga0466960_0059032
499 Ga0466960_0131241
500 Ga0495653_0011993
501 Ga0495580_0039751
502 Ga0495580_0082314
503 Ga0495582_0209333
504 Ga0495639_0001841
505 Ga0495662_0004981
506 Ga0495664_0006610
507 Ga0495594_0047195
508 Ga0495594_0106752
509 Ga0495630_0006154
510 Ga0495631_0073329
511 Ga0495643_0124303
512 Ga0495663_0072280
513 Ga0495642_0021175
514 Ga0495642_0043051
515 Ga0495665_0000673
516 Ga0495586_0000749
517 Ga0495586_0005339
518 Ga0495587_0001807
519 Ga0495645_0000701
520 Ga0495667_0000729
521 Ga0495656_0000723
522 Ga0495656_0026853
523 Ga0495659_0049784
524 Ga0495588_0009017
525 Ga0495588_0034903
526 Ga0495588_0036037
527 Ga0495588_0151071
528 Ga0495657_0021096
529 Ga0495623_0014645
530 Ga0495613_0279434
531 Ga0495670_0001235
532 Ga0495670_0067287
533 Ga0495600_0001185
534 Ga0495600_0037666
535 Ga0495581_0000756
536 Ga0495581_0001481
537 Ga0495581_0102250
538 Ga0495636_0021304
539 Ga0495672_0039725
540 Ga0495681_0137475
541 Ga0496100_0445298
542 Ga0496101_0016590
543 Ga0496102_0009619
544 Ga0496102_0036787
545 Ga0496102_0053218
546 Ga0496102_0162082
547 Ga0496102_0162445
548 Ga0496102_0269853
549 Ga0496102_0375611
550 Ga0496102_0858907
551 Ga0496103_0005076
552 Ga0496103_0019931
553 Ga0496103_0273120
554 Ga0496103_0335841
555 Ga0496105_0005304
556 Ga0496105_0020315
557 Ga0496105_0040285
558 Ga0496105_0330201
559 Ga0496106_0023522
560 Ga0496106_0163261
561 Ga0496107_0013613
562 Ga0496107_0157438
563 Ga0496107_0399285
564 Ga0496108_0030151
565 Ga0496108_0047195
566 Ga0496108_0149612
567 Ga0496108_0360135
568 Ga0496109_0110873
569 Ga0496109_0119114
570 Ga0496109_0340789
571 Ga0496109_0560599
572 Ga0496110_0028363
573 Ga0496110_0032854
574 Ga0496110_0051394
575 Ga0496110_0390442
576 Ga0496111_0093659
577 Ga0496111_0310982
578 Ga0496111_0336985
579 Ga0496113_0111658
580 Ga0496113_0329304
581 Ga0496113_0383096
582 Ga0496113_0516885
583 Ga0496114_0022362
584 Ga0496114_0026731
585 Ga0496114_0056768
586 Ga0496114_0187878
587 Ga0496114_0356182
588 Ga0496115_0016504
589 Ga0496115_0079699
590 Ga0496115_0315755
591 Ga0496115_0403797
592 Ga0496116_0014171
593 Ga0496116_0038675
594 Ga0496117_0000053
595 Ga0496117_0011044
596 Ga0496117_0033769
597 Ga0496117_0087833
598 Ga0496117_0105418
599 Ga0496117_0239429
600 Ga0496117_0250443
601 Ga0496118_0006827
602 Ga0496119_0001250
603 Ga0496119_0001577
604 Ga0496119_0009577
605 Ga0496119_0019101
606 Ga0496119_0026129
607 Ga0496120_0001014
608 Ga0496120_0001497
609 Ga0496120_0007507
610 Ga0496122_0000030
611 Ga0496122_0000360
612 Ga0496122_0008304
613 Ga0496123_0000024
614 Ga0496123_0002859
615 Ga0496123_0006394
616 Ga0496124_0015329
617 Ga0496124_0192391
618 Ga0496124_0257088
619 Ga0496125_0003229
620 Ga0496125_0024493
621 Ga0496125_0100377
622 Ga0496126_0041788
623 Ga0496126_0088821
624 Ga0496126_0219861
625 Ga0501033_0025326
626 Ga0501033_0234216
627 Ga0501039_0161827
628 Ga0501042_0003175
629 Ga0501047_0053701
630 Ga0501070_0000088
631 Ga0501070_0000835
632 Ga0501070_0005761
633 Ga0501073_0000391
634 Ga0501080_0013739
635 Ga0501080_0137657
636 Ga0501080_0308195
637 Ga0501083_0000052
638 Ga0501083_0008309
639 Ga0501035_0127595
640 nmdc:mga00v17_103063_c1
641 nmdc:mga00v17_179766_c1
642 nmdc:mga0yw44_14443_c1
643 nmdc:mga0yw44_159389_c2
644 nmdc:mga0yw44_268555_c1
645 nmdc:mga08y16_481709_c1
646 Ga0500635_0000013
647 Ga0500643_000487
648 Ga0500556_0000239
649 Ga0500562_000806
650 Ga0500593_011188
651 Ga0500655_001670
652 Ga0500559_0000156
653 Ga0500573_0058187
654 Ga0500616_0021151
655 Ga0466962_0081532
656 2588108537
657 2643767470
658 2643875441
659 2644095941
660 2644110731
661 2644382496
662 2723642353
663 2758226087
664 2774380331
665 2808631156
666 2808902328
667 2809227470
668 2812323151
669 2844842346
670 2852634231
671 2852645699
672 2857720264
673 2857735893
674 2870630396
675 2884765304
676 2895661531
677 2904511955
678 2904777477
679 2908680872
680 2919051336
681 2919057994
682 2919071578
683 2919524387
684 2928091898
685 2928155991
686 2935412734
687 2939664001
688 2966925037
689 2974297226
690 2974326540
691 2977231461
692 2977240235
693 2977266670
694 2984545487
695 2984581340
696 8016257508
697 8045831625
698 8054107749

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04452

Methyltrans_RNA

RNA methyltransferase domain

77

259

0.9

PF20260

PUA_4

RNA methyltransferase PUA domain

25

69

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vhk-assembly3.cif.gz_D crystal structure of an hypothetical protein 0.8756 75 248
1vhk-assembly3.cif.gz_A crystal structure of an hypothetical protein 0.8656 5 248
1vhk-assembly3.cif.gz_C crystal structure of an hypothetical protein 0.8501 5 248
1vhk-assembly3.cif.gz_A crystal structure of an hypothetical protein 0.8447 5 248
5vm8-assembly3.cif.gz_B crystal structure of a ribosomal rna small subunit methyltransferase e from neisseria gonorrhoeae bound to s-adenosyl methionine 0.8442 2 247
ID Description Score Start End Superfamily
4l69A01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.8968 2 76 2.40.240.20
4l69A01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.885 2 76 2.40.240.20
1vhyA01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.8811 4 77 2.40.240.20
5o95A01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.8804 1 75 2.40.240.20
af_Q54SC0_1_67_2.40.240.20 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.8716 5 72 2.40.240.20
ID Description Score Start End GO Terms
AF-A0A519GA40-F1-model_v4 16S rRNA (Uracil(1498)-N(3))-methyltransferase 0.9499 2 75 GO:0008168
GO:0032259
AF-A0A4Q8ACM8-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9154 1 251 GO:0005737
GO:0070042
GO:0070475
AF-A0A4Q5BD28-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9125 1 251 GO:0005737
GO:0070042
GO:0070475
AF-A0A4Q8ACM8-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9118 1 251 GO:0005737
GO:0070042
GO:0070475
AF-A0A495YXT7-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9114 5 249 GO:0005737
GO:0070042
GO:0070475

Map