F417742

General Info

Members Datasets Scaffolds Average Seq Length
348 228 310 301

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2904479285|2904483048
Length 361
Sequence PPIVPSSVRPRYAGRFAPSPTGPLHAGSLVAALASWLDARSHGGQWLVRIEDIDPPRCQPDADRLILAQLHALGLVPDDEPVWQSRRHARYANALEDLLAHGLAYPCGCTRRDIDAAQAALRPSAVHERHSERVYPGTCRSGLHGKPARAWRMLTTGLTMTTTPAGATAFAAPPPSSAGAGVDIRLAPEACPPESDRTPASAHLWVTWHDRLLGRQAQDVTAQVGDFVLRRADGLWAYQLAVVVDDADQAITHVVRGSDLTDNTPRQLWLQQALGLPHPQYLHVPLVLDSRGEKLSKQHGAPALDTHSPAACRLALDAAAQALGLPPVAASTPAGEALSAWTEGWRALRGMPLAVSCTPGR

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
3 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
4 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
5 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
6 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
7 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
8 2643221658 Variovorax sp. Root411 Isolate Unclassified
9 2643221672 Variovorax sp. Root434 Isolate Unclassified
10 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
11 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
12 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
13 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
14 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
15 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
16 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
17 2842747753 Variovorax sp. R-72060 Isolate Unclassified
18 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
19 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
20 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
21 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
22 2904456579 Variovorax sp. 2002 Isolate Unclassified
23 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
24 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
25 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
26 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
27 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
28 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
29 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
30 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
31 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
32 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
33 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
34 2929520902 Variovorax beijingensis 502 Isolate Unclassified
35 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
36 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
37 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
38 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
39 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
40 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
41 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
42 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
43 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
44 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
45 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
46 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
47 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
48 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
49 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
50 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
51 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
52 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
53 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
54 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
55 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
56 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
57 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
58 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
59 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
60 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
61 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
62 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
63 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
64 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
67 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
68 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
69 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
70 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
71 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
72 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
73 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
74 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
75 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
76 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
77 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
78 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
79 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
80 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
81 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
82 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
83 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
84 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
85 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
86 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
87 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
88 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
89 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
90 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
91 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
92 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
93 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
94 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
95 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
100 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
104 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
105 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
107 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
108 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
111 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
129 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
130 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
131 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
132 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
133 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
134 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
135 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
136 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
137 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
138 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
139 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
140 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
141 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
144 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
145 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
146 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
147 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
148 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
149 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
150 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
151 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
152 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
153 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
154 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
155 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
156 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
157 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
158 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
159 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
160 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
161 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
162 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
163 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
164 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
165 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
166 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
167 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
168 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
169 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
172 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
173 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
174 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
175 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
176 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
177 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
178 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
179 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
180 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
181 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
182 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
183 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
184 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
185 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
186 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
187 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
188 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
194 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
198 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
199 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
200 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
201 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
202 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
203 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
204 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
205 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
206 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
207 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
209 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
210 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
211 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
212 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
213 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
214 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
215 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
216 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
217 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
218 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
219 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
220 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
221 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
222 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
223 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
224 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
225 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
226 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
227 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
228 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.08
Metatranscriptomes 0
Isolates 10.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 37.36
Nodule 0.86
Rhizoplane 0.29
Rhizosphere 47.99
Stem 0
Stem Tuber 0
Unclassified 13.51

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1007173 3300002987 Bacteria 3231
2 JGI25151J46595_10011094 3300003187 Bacteria 4156
3 rootH1_10023260 3300003316 Bacteria 2541
4 rootL2_10008456 3300003322 Bacteria 3078
5 rootH1_10098721 3300003323 Bacteria 2430
6 Ga0055538_1000019 3300003751 Bacteria 282365
7 Ga0055539_1000024 3300003752 Bacteria 282365
8 Ga0055533_1000032 3300003756 Bacteria 282365
9 Ga0055525_1000041 3300003759 Bacteria 282365
10 Ga0055526_1001483 3300003771 Bacteria 16653
11 Ga0055537_1000102 3300003773 Bacteria 63809
12 Ga0055537_1000620 3300003773 Bacteria 19417
13 Ga0055524_1000093 3300003775 Bacteria 111953
14 Ga0055536_1002740 3300003781 Bacteria 9750
15 Ga0055534_1000572 3300003784 Bacteria 19377
16 Ga0055534_1001570 3300003784 Bacteria 8896
17 Ga0055528_1000696 3300003790 Bacteria 23933
18 Ga0055528_1004614 3300003790 Bacteria 6597
19 Ga0055530_10000891 3300003791 Bacteria 24561
20 Ga0055530_10006502 3300003791 Bacteria 5202
21 Ga0055540_1000089 3300003792 Bacteria 100214
22 Ga0055540_1002079 3300003792 Bacteria 11006
23 Ga0055540_1003568 3300003792 Bacteria 7437
24 Ga0055540_1006103 3300003792 Bacteria 4861
25 Ga0055531_10000021 3300003794 Bacteria 167213
26 Ga0055531_10000211 3300003794 Bacteria 64226
27 Ga0055531_10002983 3300003794 Bacteria 10998
28 Ga0055531_10008406 3300003794 Bacteria 5451
29 Ga0055541_1000018 3300003841 Bacteria 282365
30 Ga0070666_10155649 3300005335 Bacteria 1596
31 Ga0070669_100030616 3300005353 Bacteria 3885
32 Ga0070671_100148514 3300005355 Bacteria 1979
33 Ga0070667_100192328 3300005367 Bacteria 1808
34 Ga0070662_100008279 3300005457 Bacteria 6773
35 Ga0070662_100080925 3300005457 Bacteria 2419
36 Ga0070706_100078633 3300005467 Bacteria 3053
37 Ga0068853_100516429 3300005539 Bacteria 1129
38 Ga0068855_100000082 3300005563 Bacteria 114668
39 Ga0068855_100449020 3300005563 Bacteria 1407
40 Ga0068857_100636647 3300005577 Bacteria 1010
41 Ga0068854_100005300 3300005578 Bacteria 8138
42 Ga0068856_100151497 3300005614 Bacteria 2328
43 Ga0068852_100198805 3300005616 Bacteria 1896
44 Ga0068851_10136893 3300005834 Bacteria 1329
45 Ga0075365_10000946 3300006038 Bacteria 12302
46 Ga0075368_10003794 3300006042 Bacteria 5082
47 Ga0075368_10078824 3300006042 Bacteria 1338
48 Ga0075363_100001972 3300006048 Bacteria 8160
49 Ga0075363_100002712 3300006048 Bacteria 7324
50 Ga0075363_100017122 3300006048 Bacteria 3588
51 Ga0075363_100023553 3300006048 Bacteria 3122
52 Ga0075363_100110692 3300006048 Bacteria 1526
53 Ga0075364_10013812 3300006051 Bacteria 4975
54 Ga0075364_10020639 3300006051 Bacteria 4144
55 Ga0075364_10022000 3300006051 Bacteria 4023
56 Ga0075364_10037934 3300006051 Bacteria 3122
57 Ga0075367_10000719 3300006178 Bacteria 12806
58 Ga0075367_10003352 3300006178 Bacteria 7617
59 Ga0075367_10004162 3300006178 Bacteria 7016
60 Ga0075367_10090119 3300006178 Bacteria 1865
61 Ga0075369_10001697 3300006186 Bacteria 7620
62 Ga0075366_10000433 3300006195 Bacteria 19528
63 Ga0075366_10002190 3300006195 Bacteria 9976
64 Ga0075366_10008406 3300006195 Bacteria 5737
65 Ga0075366_10029318 3300006195 Bacteria 3233
66 Ga0075370_10000213 3300006353 Bacteria 20632
67 Ga0075370_10001753 3300006353 Bacteria 9669
68 Ga0075370_10001965 3300006353 Bacteria 9297
69 Ga0075370_10006459 3300006353 Bacteria 5899
70 Ga0075370_10063807 3300006353 Bacteria 2100
71 Ga0075370_10081980 3300006353 Bacteria 1854
72 Ga0075370_10133481 3300006353 Bacteria 1449
73 Ga0068871_100223536 3300006358 Bacteria 1632
74 Ga0075429_100280336 3300006880 Bacteria 1460
75 Ga0079104_1025658 3300006946 Bacteria 1535
76 Ga0105244_10010538 3300009036 Bacteria 5599
77 Ga0105245_10078418 3300009098 Bacteria 3014
78 Ga0105243_10002525 3300009148 Bacteria 15279
79 Ga0105237_10002949 3300009545 Bacteria 20605
80 Ga0105237_10036062 3300009545 Bacteria 5003
81 Ga0105237_10434129 3300009545 Bacteria 1319
82 Ga0105238_10000128 3300009551 Bacteria 83216
83 Ga0105238_10355846 3300009551 Bacteria 1453
84 Ga0105239_10005306 3300010375 Bacteria 15138
85 Ga0105246_10093790 3300011119 Bacteria 2169
86 Ga0157373_10008505 3300013100 Bacteria 7625
87 Ga0182008_10003400 3300014497 Bacteria 9632
88 Ga0157376_10083818 3300014969 Bacteria 2743
89 Ga0182006_1001089 3300015261 Bacteria 17406
90 Ga0182006_1003646 3300015261 Bacteria 7813
91 Ga0182007_10001138 3300015262 Bacteria 14409
92 Ga0182007_10003407 3300015262 Bacteria 7494
93 Ga0182007_10024392 3300015262 Bacteria 2116
94 Ga0213872_10012552 3300021361 Bacteria 3984
95 Ga0213872_10027739 3300021361 Bacteria 2598
96 Ga0209784_100009 3300025224 Bacteria 688031
97 Ga0209566_100007 3300025225 Bacteria 688031
98 Ga0209674_100018 3300025226 Bacteria 688031
99 Ga0209563_100020 3300025230 Bacteria 688031
100 Ga0207425_1010011 3300025245 Bacteria 2327
101 Ga0209677_100010 3300025253 Bacteria 688031
102 Ga0209565_1000040 3300025263 Bacteria 266543
103 Ga0209565_1000161 3300025263 Bacteria 90019
104 Ga0209673_1000109 3300025273 Bacteria 183000
105 Ga0209673_1000391 3300025273 Bacteria 78867
106 Ga0209673_1004144 3300025273 Bacteria 7940
107 Ga0209130_1000118 3300025284 Bacteria 129005
108 Ga0209675_1000024 3300025291 Bacteria 312615
109 Ga0209675_1000111 3300025291 Bacteria 114805
110 Ga0209676_1000054 3300025292 Bacteria 365890
111 Ga0209676_1001458 3300025292 Bacteria 22149
112 Ga0209676_1014545 3300025292 Bacteria 2954
113 Ga0209025_1001351 3300025294 Bacteria 32990
114 Ga0209564_1000610 3300025295 Bacteria 55376
115 Ga0209564_1005730 3300025295 Bacteria 6948
116 Ga0209050_1000066 3300025298 Bacteria 305458
117 Ga0209050_1003374 3300025298 Bacteria 11878
118 Ga0209050_1005562 3300025298 Bacteria 7845
119 Ga0209050_1009225 3300025298 Bacteria 5090
120 Ga0209256_1000003 3300025299 Bacteria 1661127
121 Ga0207426_1001157 3300025302 Bacteria 23696
122 Ga0209051_1000044 3300025303 Bacteria 305458
123 Ga0209051_1000490 3300025303 Bacteria 51070
124 Ga0209051_1001013 3300025303 Bacteria 26927
125 Ga0209051_1003223 3300025303 Bacteria 10876
126 Ga0209257_1000032 3300025304 Bacteria 680354
127 Ga0209257_1000082 3300025304 Bacteria 305458
128 Ga0209257_1000508 3300025304 Bacteria 68156
129 Ga0209257_1009341 3300025304 Bacteria 5283
130 Ga0209257_1016927 3300025304 Bacteria 2907
131 Ga0207656_10075870 3300025321 Bacteria 1503
132 Ga0207655_1007779 3300025728 Bacteria 6907
133 Ga0207684_10010501 3300025910 Bacteria 8148
134 Ga0207695_10005770 3300025913 Bacteria 16300
135 Ga0207671_10009160 3300025914 Bacteria 8306
136 Ga0207671_10265371 3300025914 Bacteria 1352
137 Ga0207671_10268351 3300025914 Bacteria 1344
138 Ga0207681_10026508 3300025923 Bacteria 3739
139 Ga0207694_10000845 3300025924 Bacteria 27248
140 Ga0207694_10243052 3300025924 Bacteria 1471
141 Ga0207687_10120365 3300025927 Bacteria 1962
142 Ga0207706_10004342 3300025933 Bacteria 13312
143 Ga0207706_10163583 3300025933 Bacteria 1956
144 Ga0207709_10002298 3300025935 Bacteria 12110
145 Ga0207667_10000115 3300025949 Bacteria 128732
146 Ga0207667_10191848 3300025949 Bacteria 2097
147 Ga0207677_10031871 3300026023 Bacteria 3381
148 Ga0207678_10029346 3300026067 Bacteria 4800
149 Ga0207702_10155064 3300026078 Bacteria 2087
150 Ga0207674_10134792 3300026116 Bacteria 2432
151 Ga0209282_1000979 3300027666 Bacteria 14932
152 Ga0209813_10004269 3300027866 Bacteria 3400
153 Ga0307515_10000020 3300028794 Bacteria 411735
154 Ga0307515_10055207 3300028794 Bacteria 5811
155 Ga0265331_10066192 3300031250 Bacteria 1697
156 Ga0265327_10000311 3300031251 Bacteria 93995
157 Ga0307513_10000021 3300031456 Bacteria 228078
158 Ga0307513_10012920 3300031456 Bacteria 10270
159 Ga0307408_100014973 3300031548 Bacteria 5161
160 Ga0307408_100034583 3300031548 Bacteria 3540
161 Ga0307408_100139333 3300031548 Bacteria 1902
162 Ga0307508_10080281 3300031616 Bacteria 2844
163 Ga0265314_10008188 3300031711 Bacteria 8989
164 Ga0307516_10000386 3300031730 Bacteria 57562
165 Ga0307516_10110918 3300031730 Bacteria 2546
166 Ga0307516_10162427 3300031730 Bacteria 1983
167 Ga0307414_10314424 3300032004 Bacteria 1330
168 Ga0307411_10024141 3300032005 Bacteria 3618
169 Ga0307507_10170323 3300033179 Bacteria 1584
170 Ga0395899_0114113 3300037312 Bacteria 1940
171 Ga0395900_0034672 3300037418 Bacteria 5198
172 Ga0395898_0160732 3300037466 Bacteria 2148
173 Ga0395898_0313647 3300037466 Bacteria 1496
174 Ga0395905_0000249 3300037471 Bacteria 80584
175 Ga0395905_0006594 3300037471 Bacteria 11649
176 Ga0395905_0010120 3300037471 Bacteria 9194
177 Ga0395905_0102456 3300037471 Bacteria 2687
178 Ga0395905_0446166 3300037471 Bacteria 1191
179 Ga0395901_0268450 3300038443 Bacteria 1775
180 Ga0436361_0181224 3300039447 Bacteria 8489
181 Ga0436361_0323470 3300039447 Bacteria 9662
182 Ga0436361_0832973 3300039447 Bacteria 1513
183 Ga0439466_0037995 3300041411 Bacteria 1619
184 Ga0439442_006117 3300042002 Bacteria 2413
185 Ga0439449_0011516 3300042007 Bacteria 3327
186 Ga0439462_0016171 3300042015 Bacteria 1926
187 Ga0450923_001320 3300042125 Bacteria 3243
188 Ga0450891_000252 3300042129 Bacteria 5454
189 Ga0450898_001305 3300042134 Bacteria 3251
190 Ga0466972_0001202 3300044658 Bacteria 12449
191 Ga0466964_0050668 3300044706 Bacteria 1703
192 Ga0466968_0036453 3300044735 Bacteria 2061
193 Ga0466970_0026019 3300044765 Bacteria 3066
194 Ga0466959_0090085 3300045049 Bacteria 2203
195 Ga0451576_0463805 3300045051 Bacteria 1330
196 Ga0495651_0005747 3300046462 Bacteria 9457
197 Ga0495650_0002432 3300046471 Bacteria 15093
198 Ga0495585_0001670 3300046492 Bacteria 16959
199 Ga0495596_0001741 3300046500 Bacteria 12204
200 Ga0495620_0098640 3300046515 Bacteria 1166
201 Ga0495628_0003083 3300046516 Bacteria 14930
202 Ga0495632_0007387 3300046519 Bacteria 6908
203 Ga0495642_0000836 3300046528 Bacteria 14732
204 Ga0495645_0005945 3300046543 Bacteria 8434
205 Ga0495633_0001060 3300046558 Bacteria 22379
206 Ga0495625_0000572 3300046660 Bacteria 53759
207 Ga0495625_0004650 3300046660 Bacteria 12892
208 Ga0495624_0048356 3300046690 Bacteria 2700
209 Ga0495649_0019987 3300046694 Bacteria 3758
210 Ga0495676_0436106 3300047321 Bacteria 865
211 Ga0495687_000558 3300047443 Bacteria 43907
212 Ga0495687_007412 3300047443 Bacteria 6462
213 Ga0495685_043048 3300047447 Bacteria 1541
214 Ga0495593_0019504 3300047673 Bacteria 3801
215 Ga0495626_0057575 3300048091 Bacteria 1778
216 Ga0496102_0061497 3300048905 Bacteria 3437
217 Ga0496116_0025038 3300048919 Bacteria 4398
218 Ga0496116_0067702 3300048919 Bacteria 2279
219 Ga0496117_0136889 3300048920 Bacteria 1474
220 Ga0496121_0004489 3300048924 Bacteria 18712
221 Ga0496121_0004615 3300048924 Bacteria 18354
222 Ga0496121_0099668 3300048924 Bacteria 2245
223 Ga0496122_0002198 3300048925 Bacteria 28484
224 Ga0496122_0008039 3300048925 Bacteria 11515
225 Ga0496122_0061105 3300048925 Bacteria 2768
226 Ga0496123_0000314 3300048926 Bacteria 92927
227 Ga0496123_0039215 3300048926 Bacteria 3316
228 Ga0496124_0000317 3300048927 Bacteria 89188
229 Ga0496124_0145055 3300048927 Bacteria 1869
230 Ga0496125_0003897 3300048928 Bacteria 17629
231 Ga0496125_0010015 3300048928 Bacteria 9632
232 Ga0496125_0015439 3300048928 Bacteria 7387
233 Ga0496125_0196300 3300048928 Bacteria 1327
234 Ga0496126_0007668 3300048929 Bacteria 11781
235 Ga0501031_0001997 3300049568 Bacteria 12874
236 Ga0501031_0010880 3300049568 Bacteria 5927
237 Ga0501032_0006231 3300049569 Bacteria 8778
238 Ga0501032_0067901 3300049569 Bacteria 2381
239 Ga0501033_0002597 3300049570 Bacteria 15231
240 Ga0501033_0019283 3300049570 Bacteria 5154
241 Ga0501034_0011724 3300049571 Bacteria 9068
242 Ga0501034_0060608 3300049571 Bacteria 3801
243 Ga0501036_0001771 3300049572 Bacteria 16761
244 Ga0501036_0155048 3300049572 Bacteria 1932
245 Ga0501037_0026104 3300049573 Bacteria 4317
246 Ga0501037_0028039 3300049573 Bacteria 4159
247 Ga0501038_0000494 3300049574 Bacteria 34711
248 Ga0501038_0077129 3300049574 Bacteria 2814
249 Ga0501039_0034908 3300049575 Bacteria 3882
250 Ga0501043_0001194 3300049579 Bacteria 22852
251 Ga0501047_0008793 3300049581 Bacteria 9527
252 Ga0501047_0076618 3300049581 Bacteria 3218
253 Ga0501047_0373170 3300049581 Bacteria 1261
254 Ga0501198_000058 3300049649 Bacteria 31939
255 Ga0501211_000961 3300049658 Bacteria 3022
256 Ga0501222_000066 3300049662 Bacteria 32105
257 Ga0501222_005309 3300049662 Bacteria 1741
258 Ga0501235_001803 3300049669 Bacteria 4595
259 Ga0501257_021862 3300049686 Bacteria 1511
260 Ga0501221_001523 3300049704 Bacteria 3836
261 Ga0501080_0292825 3300049742 Bacteria 1478
262 Ga0501265_003955 3300049762 Bacteria 1682
263 Ga0501267_002138 3300049764 Bacteria 1755
264 Ga0501272_004822 3300049769 Bacteria 1410
265 Ga0501035_0018063 3300049822 Bacteria 6499
266 Ga0501035_0030529 3300049822 Bacteria 4911
267 Ga0501035_0246779 3300049822 Bacteria 1517
268 Ga0501044_0004431 3300049823 Bacteria 15712
269 Ga0501044_0012609 3300049823 Bacteria 9154
270 Ga0501044_0254416 3300049823 Bacteria 1696
271 nmdc:mga03683_22033_c1 3300050489 Bacteria 2465
272 nmdc:mga03683_2951_c1 3300050489 Bacteria 5376
273 nmdc:mga03n38_24446_c1 3300050490 Bacteria 2470
274 nmdc:mga03n38_33216_c1 3300050490 Bacteria 2193
275 nmdc:mga03n38_3511_c1 3300050490 Bacteria 5052
276 nmdc:mga03n38_5679_c1 3300050490 Bacteria 4272
277 nmdc:mga00v17_13729_c1 3300050491 Bacteria 4502
278 nmdc:mga00v17_143582_c1 3300050491 Bacteria 1532
279 nmdc:mga00v17_71124_c1 3300050491 Bacteria 2156
280 nmdc:mga0yw44_14850_c1 3300050492 Bacteria 4151
281 nmdc:mga0yw44_56881_c1 3300050492 Bacteria 2385
282 nmdc:mga0k408_10259_c1 3300050493 Bacteria 5064
283 nmdc:mga0k408_1731_c1 3300050493 Bacteria 11708
284 nmdc:mga0k408_21702_c1 3300050493 Bacteria 3609
285 nmdc:mga0k408_489_c1 3300050493 Bacteria 21719
286 nmdc:mga0k408_5725_c1 3300050493 Bacteria 6607
287 nmdc:mga06z11_212212_c1 3300050494 Bacteria 1128
288 nmdc:mga06z11_8046_c1 3300050494 Bacteria 4372
289 nmdc:mga04h51_2634_c1 3300050495 Bacteria 4274
290 nmdc:mga07m45_20257_c1 3300050496 Bacteria 3612
291 nmdc:mga07m45_42_c1 3300050496 Bacteria 58731
292 nmdc:mga07m45_507_c1 3300050496 Bacteria 16498
293 nmdc:mga07m45_5499_c1 3300050496 Bacteria 6311
294 nmdc:mga07m45_7511_c1 3300050496 Bacteria 5572
295 nmdc:mga07m45_7794_c1 3300050496 Bacteria 5480
296 nmdc:mga07m45_8236_c2 3300050496 Bacteria 4583
297 nmdc:mga07m45_9273_c1 3300050496 Bacteria 5096
298 nmdc:mga0sz30_38892_c1 3300050516 Bacteria 1562
299 Ga0500644_0033504 3300053088 Bacteria 1650
300 Ga0500651_0000241 3300053093 Bacteria 33596
301 Ga0500571_000069 3300053110 Bacteria 32297
302 Ga0500618_007477 3300053125 Bacteria 3115
303 Ga0500626_024418 3300053128 Bacteria 2711
304 Ga0500658_0003340 3300053134 Bacteria 6081
305 Ga0500568_0014822 3300053139 Bacteria 3506
306 Ga0500616_0036869 3300053153 Bacteria 2651
307 Ga0500638_004277 3300053162 Bacteria 5469
308 Ga0500636_0146352 3300053177 Bacteria 1302
309 Ga0500645_000214 3300053730 Bacteria 44143
310 Ga0500645_002830 3300053730 Bacteria 7474

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047321 Ga0495676_0436106 Ga0495676_0436106_45_845 238
2 3300045049 Ga0466959_0090085 Ga0466959_0090085_14_754 242
3 3300050491 nmdc:mga00v17_143582_c1 nmdc:mga00v17_143582_c1_711_1475 246
4 3300037466 Ga0395898_0160732 Ga0395898_0160732_53_811 247
5 3300039447 Ga0436361_0832973 Ga0436361_0832973_720_1502 248
6 3300009545 Ga0105237_10434129 Ga0105237_104341292 262
7 3300006042 Ga0075368_10003794 Ga0075368_100037944 263
8 3300006048 Ga0075363_100023553 Ga0075363_1000235532 263
9 3300006051 Ga0075364_10037934 Ga0075364_100379342 263
10 3300006178 Ga0075367_10003352 Ga0075367_100033525 263
11 3300006186 Ga0075369_10001697 Ga0075369_100016975 263
12 3300006195 Ga0075366_10008406 Ga0075366_100084063 263
13 3300006353 Ga0075370_10006459 Ga0075370_100064597 263
14 3300027866 Ga0209813_10004269 Ga0209813_100042692 263
15 3300033179 Ga0307507_10170323 Ga0307507_101703232 263
16 3300050490 nmdc:mga03n38_3511_c1 nmdc:mga03n38_3511_c1_2575_3453 263
17 3300050492 nmdc:mga0yw44_56881_c1 nmdc:mga0yw44_56881_c1_802_1680 263
18 3300050494 nmdc:mga06z11_8046_c1 nmdc:mga06z11_8046_c1_807_1685 263
19 3300050495 nmdc:mga04h51_2634_c1 nmdc:mga04h51_2634_c1_2612_3490 263
20 3300050496 nmdc:mga07m45_7794_c1 nmdc:mga07m45_7794_c1_2762_3640 263
21 3300050496 nmdc:mga07m45_7511_c1 nmdc:mga07m45_7511_c1_690_1517 267
22 3300048927 Ga0496124_0000317 Ga0496124_0000317_41050_41943 269
23 3300048928 Ga0496125_0010015 Ga0496125_0010015_1263_2156 269
24 3300049572 Ga0501036_0155048 Ga0501036_0155048_468_1295 269
25 3300049573 Ga0501037_0026104 Ga0501037_0026104_432_1259 269
26 3300009098 Ga0105245_10078418 Ga0105245_100784183 271
27 3300014969 Ga0157376_10083818 Ga0157376_100838183 271
28 3300025927 Ga0207687_10120365 Ga0207687_101203652 271
29 3300031548 Ga0307408_100034583 Ga0307408_1000345832 271
30 3300031730 Ga0307516_10162427 Ga0307516_101624272 272
31 3300037418 Ga0395900_0034672 Ga0395900_0034672_272_1153 272
32 3300037466 Ga0395898_0313647 Ga0395898_0313647_443_1324 272
33 3300038443 Ga0395901_0268450 Ga0395901_0268450_389_1270 272
34 3300053730 Ga0500645_002830 Ga0500645_002830_74_988 272
35 3300005563 Ga0068855_100449020 Ga0068855_1004490201 276
36 3300005616 Ga0068852_100198805 Ga0068852_1001988051 276
37 3300006195 Ga0075366_10029318 Ga0075366_100293184 276
38 3300050493 nmdc:mga0k408_21702_c1 nmdc:mga0k408_21702_c1_2411_3277 276
39 3300044765 Ga0466970_0026019 Ga0466970_0026019_254_1099 277
40 3300046543 Ga0495645_0005945 Ga0495645_0005945_2839_3738 278
41 iso_pu_bacteria 2511231026 2511386356 278
42 iso_pu_bacteria 2551306416 2553007152 278
43 iso_pu_bacteria 2765235838 2765570733 278
44 iso_pu_bacteria 2808606386 2808983180 278
45 iso_pu_bacteria 2808606415 2809128400 278
46 iso_pu_bacteria 2808606419 2809148021 278
47 iso_pu_bacteria 2818991449 2819616286 278
48 iso_pu_bacteria 2839094727 2839098285 278
49 iso_pu_bacteria 2852618963 2852620564 278
50 iso_pu_bacteria 2904439833 2904443073 278
51 iso_pu_bacteria 2904530477 2904532814 278
52 iso_pu_bacteria 2904584206 2904585372 278
53 iso_pu_bacteria 2904589729 2904593721 278
54 iso_pu_bacteria 2904601388 2904604133 278
55 iso_pu_bacteria 2919079590 2919081639 278
56 iso_pu_bacteria 2923510766 2923513220 278
57 iso_pu_bacteria 2928130867 2928134928 278
58 3300005614 Ga0068856_100151497 Ga0068856_1001514972 279
59 3300026078 Ga0207702_10155064 Ga0207702_101550643 279
60 3300037471 Ga0395905_0000249 Ga0395905_0000249_40262_41143 279
61 3300046690 Ga0495624_0048356 Ga0495624_0048356_591_1481 279
62 3300050493 nmdc:mga0k408_5725_c1 nmdc:mga0k408_5725_c1_2878_3822 279
63 3300003322 rootL2_10008456 rootL2_100084564 280
64 3300003323 rootH1_10098721 rootH1_100987214 280
65 3300003751 Ga0055538_1000019 Ga0055538_1000019104 280
66 3300003752 Ga0055539_1000024 Ga0055539_1000024187 280
67 3300003756 Ga0055533_1000032 Ga0055533_1000032104 280
68 3300003759 Ga0055525_1000041 Ga0055525_1000041104 280
69 3300003794 Ga0055531_10000021 Ga0055531_1000002156 280
70 3300003841 Ga0055541_1000018 Ga0055541_1000018187 280
71 3300005563 Ga0068855_100000082 Ga0068855_100000082110 280
72 3300005578 Ga0068854_100005300 Ga0068854_1000053006 280
73 3300005834 Ga0068851_10136893 Ga0068851_101368932 280
74 3300006946 Ga0079104_1025658 Ga0079104_10256582 280
75 3300009545 Ga0105237_10002949 Ga0105237_1000294912 280
76 3300009551 Ga0105238_10000128 Ga0105238_1000012827 280
77 3300010375 Ga0105239_10005306 Ga0105239_100053066 280
78 3300015261 Ga0182006_1001089 Ga0182006_10010896 280
79 3300015262 Ga0182007_10003407 Ga0182007_100034072 280
80 3300021361 Ga0213872_10012552 Ga0213872_100125524 280
81 3300025224 Ga0209784_100009 Ga0209784_100009254 280
82 3300025225 Ga0209566_100007 Ga0209566_100007254 280
83 3300025226 Ga0209674_100018 Ga0209674_100018254 280
84 3300025230 Ga0209563_100020 Ga0209563_100020254 280
85 3300025253 Ga0209677_100010 Ga0209677_100010254 280
86 3300025298 Ga0209050_1005562 Ga0209050_10055622 280
87 3300025303 Ga0209051_1003223 Ga0209051_10032239 280
88 3300025304 Ga0209257_1000032 Ga0209257_1000032464 280
89 3300025321 Ga0207656_10075870 Ga0207656_100758702 280
90 3300025913 Ga0207695_10005770 Ga0207695_100057705 280
91 3300025914 Ga0207671_10009160 Ga0207671_100091603 280
92 3300025924 Ga0207694_10000845 Ga0207694_1000084524 280
93 3300025949 Ga0207667_10000115 Ga0207667_10000115103 280
94 3300031616 Ga0307508_10080281 Ga0307508_100802813 280
95 3300039447 Ga0436361_0181224 Ga0436361_0181224_2774_3658 280
96 3300046462 Ga0495651_0005747 Ga0495651_0005747_7397_8290 280
97 3300046515 Ga0495620_0098640 Ga0495620_0098640_125_1075 280
98 3300046516 Ga0495628_0003083 Ga0495628_0003083_4259_5152 280
99 3300046519 Ga0495632_0007387 Ga0495632_0007387_2453_3403 280
100 3300046528 Ga0495642_0000836 Ga0495642_0000836_8356_9249 280
101 3300046660 Ga0495625_0004650 Ga0495625_0004650_422_1372 280
102 3300046694 Ga0495649_0019987 Ga0495649_0019987_2370_3320 280
103 3300047443 Ga0495687_007412 Ga0495687_007412_963_1913 280
104 3300048091 Ga0495626_0057575 Ga0495626_0057575_183_1133 280
105 3300049568 Ga0501031_0010880 Ga0501031_0010880_3799_4755 280
106 3300049569 Ga0501032_0006231 Ga0501032_0006231_1695_2651 280
107 3300049570 Ga0501033_0019283 Ga0501033_0019283_1903_2859 280
108 3300049571 Ga0501034_0011724 Ga0501034_0011724_1173_2129 280
109 3300049572 Ga0501036_0001771 Ga0501036_0001771_9316_10272 280
110 3300049573 Ga0501037_0028039 Ga0501037_0028039_844_1800 280
111 3300049574 Ga0501038_0000494 Ga0501038_0000494_22016_22972 280
112 3300049579 Ga0501043_0001194 Ga0501043_0001194_6504_7460 280
113 3300049581 Ga0501047_0008793 Ga0501047_0008793_1173_2129 280
114 3300049822 Ga0501035_0018063 Ga0501035_0018063_1981_2937 280
115 3300049823 Ga0501044_0012609 Ga0501044_0012609_7628_8584 280
116 3300053125 Ga0500618_007477 Ga0500618_007477_963_1853 280
117 3300053139 Ga0500568_0014822 Ga0500568_0014822_655_1605 280
118 3300053177 Ga0500636_0146352 Ga0500636_0146352_284_1174 280
119 iso_pu_bacteria 2919046199 2919047871 280
120 3300005335 Ga0070666_10155649 Ga0070666_101556493 281
121 3300005355 Ga0070671_100148514 Ga0070671_1001485142 281
122 3300005457 Ga0070662_100080925 Ga0070662_1000809253 281
123 3300005539 Ga0068853_100516429 Ga0068853_1005164292 281
124 3300006048 Ga0075363_100017122 Ga0075363_1000171224 281
125 3300006051 Ga0075364_10013812 Ga0075364_100138126 281
126 3300006178 Ga0075367_10004162 Ga0075367_100041627 281
127 3300006178 Ga0075367_10090119 Ga0075367_100901193 281
128 3300006195 Ga0075366_10000433 Ga0075366_100004338 281
129 3300006353 Ga0075370_10081980 Ga0075370_100819802 281
130 3300006353 Ga0075370_10133481 Ga0075370_101334812 281
131 3300009545 Ga0105237_10036062 Ga0105237_100360623 281
132 3300025914 Ga0207671_10265371 Ga0207671_102653711 281
133 3300026067 Ga0207678_10029346 Ga0207678_100293466 281
134 3300031730 Ga0307516_10110918 Ga0307516_101109182 281
135 3300047443 Ga0495687_000558 Ga0495687_000558_29077_30015 281
136 3300049662 Ga0501222_005309 Ga0501222_005309_130_1038 281
137 3300049669 Ga0501235_001803 Ga0501235_001803_1526_2434 281
138 3300049704 Ga0501221_001523 Ga0501221_001523_1454_2362 281
139 3300049764 Ga0501267_002138 Ga0501267_002138_797_1705 281
140 3300050489 nmdc:mga03683_2951_c1 nmdc:mga03683_2951_c1_406_1344 281
141 3300050490 nmdc:mga03n38_33216_c1 nmdc:mga03n38_33216_c1_1238_2176 281
142 3300050493 nmdc:mga0k408_1731_c1 nmdc:mga0k408_1731_c1_482_1420 281
143 3300050493 nmdc:mga0k408_489_c1 nmdc:mga0k408_489_c1_14300_15244 281
144 3300050496 nmdc:mga07m45_42_c1 nmdc:mga07m45_42_c1_10550_11494 281
145 iso_pu_bacteria 2521172590 2521559480 281
146 3300005467 Ga0070706_100078633 Ga0070706_1000786333 282
147 3300006042 Ga0075368_10078824 Ga0075368_100788241 282
148 3300006178 Ga0075367_10000719 Ga0075367_100007194 282
149 3300006353 Ga0075370_10001753 Ga0075370_100017534 282
150 3300006353 Ga0075370_10001965 Ga0075370_100019654 282
151 3300025910 Ga0207684_10010501 Ga0207684_100105012 282
152 3300025914 Ga0207671_10268351 Ga0207671_102683512 282
153 3300045051 Ga0451576_0463805 Ga0451576_0463805_454_1317 282
154 3300046492 Ga0495585_0001670 Ga0495585_0001670_2354_3289 282
155 3300048919 Ga0496116_0067702 Ga0496116_0067702_535_1425 282
156 3300050496 nmdc:mga07m45_5499_c1 nmdc:mga07m45_5499_c1_1715_2695 282
157 iso_pu_bacteria 2939631187 2939635294 282
158 3300042129 Ga0450891_000252 Ga0450891_000252_229_1095 283
159 iso_pu_bacteria 2643221639 2644218016 283
160 3300003792 Ga0055540_1003568 Ga0055540_10035683 284
161 3300003794 Ga0055531_10000211 Ga0055531_1000021119 284
162 iso_pu_bacteria 2904541872 2904548501 284
163 iso_pu_bacteria 2928115317 2928115925 284
164 3300037312 Ga0395899_0114113 Ga0395899_0114113_794_1666 285
165 3300037471 Ga0395905_0102456 Ga0395905_0102456_1788_2660 285
166 3300046471 Ga0495650_0002432 Ga0495650_0002432_1364_2248 285
167 3300048924 Ga0496121_0004489 Ga0496121_0004489_1844_2725 285
168 3300049658 Ga0501211_000961 Ga0501211_000961_141_1049 285
169 3300049769 Ga0501272_004822 Ga0501272_004822_228_1136 285
170 3300053088 Ga0500644_0033504 Ga0500644_0033504_428_1306 285
171 iso_pu_bacteria 2643221628 2644163074 285
172 iso_pu_bacteria 2842747753 2842747950 285
173 iso_pu_bacteria 2881101125 2881102280 285
174 iso_pu_bacteria 2929520902 2929524754 285
175 3300025304 Ga0209257_1009341 Ga0209257_10093415 286
176 3300048924 Ga0496121_0004615 Ga0496121_0004615_7650_8543 286
177 3300049569 Ga0501032_0067901 Ga0501032_0067901_490_1383 286
178 3300049570 Ga0501033_0002597 Ga0501033_0002597_8988_9881 286
179 3300049571 Ga0501034_0060608 Ga0501034_0060608_1682_2575 286
180 3300049574 Ga0501038_0077129 Ga0501038_0077129_1464_2357 286
181 3300049575 Ga0501039_0034908 Ga0501039_0034908_2569_3462 286
182 3300049581 Ga0501047_0076618 Ga0501047_0076618_409_1302 286
183 3300049822 Ga0501035_0030529 Ga0501035_0030529_2070_2963 286
184 3300049823 Ga0501044_0004431 Ga0501044_0004431_4805_5698 286
185 iso_pu_bacteria 2513020051 2513229909 286
186 iso_pu_bacteria 2643221658 2644329441 286
187 iso_pu_bacteria 2643221672 2644398501 286
188 iso_pu_bacteria 2904449895 2904455377 286
189 iso_pu_bacteria 2904456579 2904460545 286
190 iso_pu_bacteria 2945945610 2945947166 286
191 iso_pu_bacteria 2945972063 2945976854 286
192 3300006048 Ga0075363_100002712 Ga0075363_1000027126 287
193 3300006880 Ga0075429_100280336 Ga0075429_1002803362 287
194 3300028794 Ga0307515_10000020 Ga0307515_1000002033 287
195 3300047447 Ga0495685_043048 Ga0495685_043048_64_945 287
196 3300050496 nmdc:mga07m45_9273_c1 nmdc:mga07m45_9273_c1_1199_2101 287
197 3300005457 Ga0070662_100008279 Ga0070662_1000082796 288
198 3300025933 Ga0207706_10004342 Ga0207706_100043423 288
199 3300025933 Ga0207706_10163583 Ga0207706_101635832 288
200 3300028794 Ga0307515_10055207 Ga0307515_100552072 288
201 3300037471 Ga0395905_0006594 Ga0395905_0006594_4736_5629 288
202 3300044658 Ga0466972_0001202 Ga0466972_0001202_859_1749 288
203 3300044706 Ga0466964_0050668 Ga0466964_0050668_638_1528 288
204 3300046500 Ga0495596_0001741 Ga0495596_0001741_8753_9763 288
205 3300049568 Ga0501031_0001997 Ga0501031_0001997_9353_10297 288
206 3300053153 Ga0500616_0036869 Ga0500616_0036869_48_950 288
207 3300003773 Ga0055537_1000620 Ga0055537_100062014 289
208 3300003781 Ga0055536_1002740 Ga0055536_10027409 289
209 3300003784 Ga0055534_1000572 Ga0055534_100057214 289
210 3300003790 Ga0055528_1004614 Ga0055528_10046143 289
211 3300003791 Ga0055530_10006502 Ga0055530_100065025 289
212 3300003792 Ga0055540_1002079 Ga0055540_10020795 289
213 3300003794 Ga0055531_10002983 Ga0055531_100029835 289
214 3300005353 Ga0070669_100030616 Ga0070669_1000306163 289
215 3300006038 Ga0075365_10000946 Ga0075365_100009464 289
216 3300006048 Ga0075363_100001972 Ga0075363_1000019729 289
217 3300006048 Ga0075363_100110692 Ga0075363_1001106922 289
218 3300006195 Ga0075366_10002190 Ga0075366_100021905 289
219 3300006353 Ga0075370_10000213 Ga0075370_1000021313 289
220 3300006353 Ga0075370_10063807 Ga0075370_100638072 289
221 3300006358 Ga0068871_100223536 Ga0068871_1002235362 289
222 3300009036 Ga0105244_10010538 Ga0105244_100105387 289
223 3300009148 Ga0105243_10002525 Ga0105243_1000252512 289
224 3300011119 Ga0105246_10093790 Ga0105246_100937902 289
225 3300013100 Ga0157373_10008505 Ga0157373_100085053 289
226 3300014497 Ga0182008_10003400 Ga0182008_100034004 289
227 3300015261 Ga0182006_1003646 Ga0182006_10036462 289
228 3300015262 Ga0182007_10001138 Ga0182007_1000113811 289
229 3300015262 Ga0182007_10024392 Ga0182007_100243922 289
230 3300021361 Ga0213872_10027739 Ga0213872_100277391 289
231 3300025263 Ga0209565_1000040 Ga0209565_1000040154 289
232 3300025273 Ga0209673_1000109 Ga0209673_10001099 289
233 3300025273 Ga0209673_1004144 Ga0209673_10041444 289
234 3300025291 Ga0209675_1000024 Ga0209675_1000024114 289
235 3300025292 Ga0209676_1001458 Ga0209676_100145817 289
236 3300025298 Ga0209050_1003374 Ga0209050_10033748 289
237 3300025303 Ga0209051_1000490 Ga0209051_10004908 289
238 3300025304 Ga0209257_1000508 Ga0209257_100050818 289
239 3300025728 Ga0207655_1007779 Ga0207655_10077799 289
240 3300025923 Ga0207681_10026508 Ga0207681_100265083 289
241 3300025924 Ga0207694_10243052 Ga0207694_102430522 289
242 3300025935 Ga0207709_10002298 Ga0207709_100022989 289
243 3300026116 Ga0207674_10134792 Ga0207674_101347922 289
244 3300027666 Ga0209282_1000979 Ga0209282_10009798 289
245 3300031250 Ga0265331_10066192 Ga0265331_100661922 289
246 3300031251 Ga0265327_10000311 Ga0265327_100003115 289
247 3300031456 Ga0307513_10012920 Ga0307513_100129208 289
248 3300031548 Ga0307408_100139333 Ga0307408_1001393332 289
249 3300032004 Ga0307414_10314424 Ga0307414_103144242 289
250 3300032005 Ga0307411_10024141 Ga0307411_100241412 289
251 3300037471 Ga0395905_0446166 Ga0395905_0446166_137_1027 289
252 3300039447 Ga0436361_0323470 Ga0436361_0323470_6712_7626 289
253 3300041411 Ga0439466_0037995 Ga0439466_0037995_187_1110 289
254 3300042002 Ga0439442_006117 Ga0439442_006117_94_1017 289
255 3300042125 Ga0450923_001320 Ga0450923_001320_957_1880 289
256 3300042134 Ga0450898_001305 Ga0450898_001305_1420_2343 289
257 3300046660 Ga0495625_0000572 Ga0495625_0000572_18912_19835 289
258 3300048905 Ga0496102_0061497 Ga0496102_0061497_1131_2027 289
259 3300048919 Ga0496116_0025038 Ga0496116_0025038_309_1277 289
260 3300048920 Ga0496117_0136889 Ga0496117_0136889_386_1300 289
261 3300048924 Ga0496121_0099668 Ga0496121_0099668_486_1454 289
262 3300048925 Ga0496122_0002198 Ga0496122_0002198_14861_15775 289
263 3300048926 Ga0496123_0000314 Ga0496123_0000314_16099_17013 289
264 3300048927 Ga0496124_0145055 Ga0496124_0145055_261_1229 289
265 3300048928 Ga0496125_0015439 Ga0496125_0015439_2712_3680 289
266 3300049581 Ga0501047_0373170 Ga0501047_0373170_333_1211 289
267 3300049742 Ga0501080_0292825 Ga0501080_0292825_497_1375 289
268 3300049822 Ga0501035_0246779 Ga0501035_0246779_431_1309 289
269 3300049823 Ga0501044_0254416 Ga0501044_0254416_566_1444 289
270 3300050489 nmdc:mga03683_22033_c1 nmdc:mga03683_22033_c1_1084_2007 289
271 3300050490 nmdc:mga03n38_24446_c1 nmdc:mga03n38_24446_c1_1293_2171 289
272 3300050490 nmdc:mga03n38_5679_c1 nmdc:mga03n38_5679_c1_2715_3638 289
273 3300050491 nmdc:mga00v17_13729_c1 nmdc:mga00v17_13729_c1_1762_2685 289
274 3300050491 nmdc:mga00v17_71124_c1 nmdc:mga00v17_71124_c1_853_1812 289
275 3300050492 nmdc:mga0yw44_14850_c1 nmdc:mga0yw44_14850_c1_445_1368 289
276 3300050493 nmdc:mga0k408_10259_c1 nmdc:mga0k408_10259_c1_3190_4113 289
277 3300050494 nmdc:mga06z11_212212_c1 nmdc:mga06z11_212212_c1_71_1039 289
278 3300050496 nmdc:mga07m45_20257_c1 nmdc:mga07m45_20257_c1_2204_3127 289
279 3300050496 nmdc:mga07m45_507_c1 nmdc:mga07m45_507_c1_10588_11511 289
280 3300050496 nmdc:mga07m45_8236_c2 nmdc:mga07m45_8236_c2_3223_4191 289
281 3300050516 nmdc:mga0sz30_38892_c1 nmdc:mga0sz30_38892_c1_47_970 289
282 iso_pu_bacteria 2842718218 2842719176 289
283 3300003792 Ga0055540_1006103 Ga0055540_10061031 290
284 3300005367 Ga0070667_100192328 Ga0070667_1001923282 290
285 3300025303 Ga0209051_1001013 Ga0209051_100101321 290
286 3300025949 Ga0207667_10191848 Ga0207667_101918482 290
287 3300047673 Ga0495593_0019504 Ga0495593_0019504_2281_3243 290
288 3300053093 Ga0500651_0000241 Ga0500651_0000241_28001_28963 290
289 3300053110 Ga0500571_000069 Ga0500571_000069_19563_20525 290
290 3300053128 Ga0500626_024418 Ga0500626_024418_1228_2190 290
291 3300053134 Ga0500658_0003340 Ga0500658_0003340_3841_4803 290
292 3300053162 Ga0500638_004277 Ga0500638_004277_1231_2193 290
293 3300009551 Ga0105238_10355846 Ga0105238_103558462 291
294 3300037471 Ga0395905_0010120 Ga0395905_0010120_5316_6203 291
295 3300046558 Ga0495633_0001060 Ga0495633_0001060_14559_15533 291
296 3300048928 Ga0496125_0196300 Ga0496125_0196300_293_1267 291
297 3300005577 Ga0068857_100636647 Ga0068857_1006366471 292
298 3300006051 Ga0075364_10020639 Ga0075364_100206392 292
299 3300006051 Ga0075364_10022000 Ga0075364_100220002 292
300 3300026023 Ga0207677_10031871 Ga0207677_100318713 292
301 3300031711 Ga0265314_10008188 Ga0265314_100081886 292
302 3300042007 Ga0439449_0011516 Ga0439449_0011516_92_973 292
303 3300042015 Ga0439462_0016171 Ga0439462_0016171_861_1742 292
304 3300049649 Ga0501198_000058 Ga0501198_000058_15500_16432 292
305 3300049662 Ga0501222_000066 Ga0501222_000066_15641_16573 292
306 3300049686 Ga0501257_021862 Ga0501257_021862_548_1465 292
307 3300049762 Ga0501265_003955 Ga0501265_003955_309_1226 292
308 iso_pu_bacteria 2511231002 2511246213 292
309 iso_pu_bacteria 2932422444 2932425106 292
310 3300044735 Ga0466968_0036453 Ga0466968_0036453_101_1183 293
311 3300031456 Ga0307513_10000021 Ga0307513_10000021203 294
312 3300031730 Ga0307516_10000386 Ga0307516_1000038613 294
313 3300048925 Ga0496122_0008039 Ga0496122_0008039_11_1003 294
314 3300048925 Ga0496122_0061105 Ga0496122_0061105_575_1582 294
315 3300048926 Ga0496123_0039215 Ga0496123_0039215_70_1062 294
316 3300048928 Ga0496125_0003897 Ga0496125_0003897_10630_11622 294
317 3300048929 Ga0496126_0007668 Ga0496126_0007668_5960_6952 294
318 3300003316 rootH1_10023260 rootH1_100232603 295
319 iso_pu_bacteria 2904479285 2904483048 295
320 3300002987 JGI25159J45721_1007173 JGI25159J45721_10071733 296
321 3300003187 JGI25151J46595_10011094 JGI25151J46595_100110942 296
322 3300003771 Ga0055526_1001483 Ga0055526_100148312 296
323 3300003773 Ga0055537_1000102 Ga0055537_10001028 296
324 3300003775 Ga0055524_1000093 Ga0055524_100009358 296
325 3300003784 Ga0055534_1001570 Ga0055534_10015708 296
326 3300003790 Ga0055528_1000696 Ga0055528_10006968 296
327 3300003791 Ga0055530_10000891 Ga0055530_1000089112 296
328 3300003792 Ga0055540_1000089 Ga0055540_100008984 296
329 3300003794 Ga0055531_10008406 Ga0055531_100084062 296
330 3300025245 Ga0207425_1010011 Ga0207425_10100112 296
331 3300025263 Ga0209565_1000161 Ga0209565_100016176 296
332 3300025273 Ga0209673_1000391 Ga0209673_100039151 296
333 3300025284 Ga0209130_1000118 Ga0209130_100011837 296
334 3300025291 Ga0209675_1000111 Ga0209675_100011198 296
335 3300025292 Ga0209676_1000054 Ga0209676_100005485 296
336 3300025292 Ga0209676_1014545 Ga0209676_10145453 296
337 3300025294 Ga0209025_1001351 Ga0209025_100135115 296
338 3300025295 Ga0209564_1000610 Ga0209564_100061020 296
339 3300025295 Ga0209564_1005730 Ga0209564_10057304 296
340 3300025298 Ga0209050_1000066 Ga0209050_100006685 296
341 3300025298 Ga0209050_1009225 Ga0209050_10092254 296
342 3300025299 Ga0209256_1000003 Ga0209256_10000031358 296
343 3300025302 Ga0207426_1001157 Ga0207426_10011579 296
344 3300025303 Ga0209051_1000044 Ga0209051_100004485 296
345 3300025304 Ga0209257_1000082 Ga0209257_100008285 296
346 3300025304 Ga0209257_1016927 Ga0209257_10169272 296
347 3300031548 Ga0307408_100014973 Ga0307408_1000149732 296
348 3300053730 Ga0500645_000214 Ga0500645_000214_31932_32930 296

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

12

142

0.92

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

197

311

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4a91-assembly1.cif.gz_A crystal structure of the glutamyl-queuosine trnaasp synthetase from e. coli complexed with l-glutamate 0.8994 2 286
5h4v-assembly5.cif.gz_E structure of glutamyl-trna synthetase (xoo1504) from xanthomonas oryzae pv. oryzae 0.8502 4 282
7k86-assembly1.cif.gz_A crystal structure of glutamyl-trna synthetase (gltx) from stenotrophomonas maltophilia 0.849 4 282
7k86-assembly2.cif.gz_B crystal structure of glutamyl-trna synthetase (gltx) from stenotrophomonas maltophilia 0.8479 4 282
4a91-assembly1.cif.gz_A crystal structure of the glutamyl-queuosine trnaasp synthetase from e. coli complexed with l-glutamate 0.8433 2 286
ID Description Score Start End Superfamily
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9436 5 234 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9287 5 234 3.40.50.620
2hz7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9104 6 229 3.40.50.620
af_P27305_7_302_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8871 1 296 3.40.50.620
2hz7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8828 6 229 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A2J4Z095-F1-model_v4 tRNA glutamyl-Q(34) synthetase GluQRS (EC 6.1.1.-) 0.9809 1 107 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A366HHL7-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase 0.9691 27 294 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-A0A6N7D0T3-F1-model_v4 Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) 0.9674 1 293 GO:0004818
GO:0005524
GO:0005829
GO:0006400
GO:0006424
GO:0008270
AF-A0A0F9N0L7-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9662 2 80 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A2D8A738-F1-model_v4 tRNA glutamyl-Q(34) synthetase GluQRS 0.9659 1 89 GO:0004818
GO:0005524
GO:0005829
GO:0006424

Feature Viewer

pLDDT pTM Quality
92.56 0.91 High
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Predicted Structure (AlphaFold2)

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