F417561

General Info

Members Datasets Scaffolds Average Seq Length
348 199 696 196

Family's Representative Sequence

Representative Sequence 3300025942|Ga0207689_10219845|Ga0207689_102198452
Length 224
Sequence MRRADRLFRIVQLLRGRRLSTAAWIAEKLEVSVRTVYRDVADLQGQGVPIDGEAGVGYRLSVSSETLSAVPRTGDQATLLTHLVLRDDGMHLYGFSTDAERELFLMLIGVQGVGPKVALAVLSGGAPRELLNAIATGDTARFQAVPGIGKRTAERIIVELREKVAGRATDDIVVRRTESDDPRTLAREGLLGLGFTPQEADRLLDQSGGESPEELIQGALRAAR

Samples

Sample ID Description Type Environment
1 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
104 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
105 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
106 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
107 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
108 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
109 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
110 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
115 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
116 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
117 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
125 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
126 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
127 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
128 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
129 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
130 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
131 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
132 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
133 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
134 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
135 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
136 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
141 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
142 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
143 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
144 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
145 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
146 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
147 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
148 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
149 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
150 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
151 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
160 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
176 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
177 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
180 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
183 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
184 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
185 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
186 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
187 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
188 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
189 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
190 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
191 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
192 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
193 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
194 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
195 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
196 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
197 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
198 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
199 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.43
Metatranscriptomes 0.57
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.29
Nodule 0
Rhizoplane 4.02
Rhizosphere 95.4
Stem 0
Stem Tuber 0
Unclassified 0.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207689_10219845 3300025942 Bacteria 1569
2 JGI25407J50210_10001712 3300003373 Bacteria 5036
3 JGI25407J50210_10025033 3300003373 Bacteria 1547
4 JGI25407J50210_10123396 3300003373 Bacteria 638
5 Ga0070658_10000894 3300005327 Bacteria 25535
6 Ga0070676_10020225 3300005328 Bacteria 3713
7 Ga0070690_100179013 3300005330 Bacteria 1464
8 Ga0070680_100024749 3300005336 Bacteria 4798
9 Ga0070682_100265063 3300005337 Bacteria 1245
10 Ga0068868_100098806 3300005338 Bacteria 2360
11 Ga0070660_100009064 3300005339 Bacteria 6984
12 Ga0070660_100125097 3300005339 Bacteria 2054
13 Ga0070689_100049151 3300005340 Bacteria 3255
14 Ga0070691_10187042 3300005341 Bacteria 1081
15 Ga0070661_100361692 3300005344 Bacteria 1141
16 Ga0070668_100009242 3300005347 Bacteria 7309
17 Ga0070675_100175988 3300005354 Bacteria 1848
18 Ga0070675_100404903 3300005354 Bacteria 1218
19 Ga0070673_100001923 3300005364 Bacteria 12478
20 Ga0070673_100010486 3300005364 Bacteria 6275
21 Ga0070688_100007335 3300005365 Bacteria 5941
22 Ga0070688_100379227 3300005365 Bacteria 1042
23 Ga0070659_100107165 3300005366 Bacteria 2253
24 Ga0070667_100400085 3300005367 Bacteria 1250
25 Ga0070710_10702181 3300005437 Bacteria 714
26 Ga0070678_100027887 3300005456 Bacteria 3842
27 Ga0070681_10339739 3300005458 Bacteria 1411
28 Ga0070685_10043884 3300005466 Bacteria 2558
29 Ga0070699_100162609 3300005518 Bacteria 1976
30 Ga0070679_100024619 3300005530 Bacteria 5900
31 Ga0070679_100107727 3300005530 Bacteria 2772
32 Ga0070684_100015371 3300005535 Bacteria 6232
33 Ga0070684_100167030 3300005535 Bacteria 1998
34 Ga0070684_100172997 3300005535 Bacteria 1962
35 Ga0070684_100299306 3300005535 Bacteria 1476
36 Ga0068853_100000336 3300005539 Bacteria 32742
37 Ga0068853_100687027 3300005539 Bacteria 976
38 Ga0070672_100130628 3300005543 Bacteria 2063
39 Ga0070686_100220895 3300005544 Bacteria 1369
40 Ga0070686_100361269 3300005544 Bacteria 1094
41 Ga0070695_100116867 3300005545 Bacteria 1819
42 Ga0070695_100333796 3300005545 Bacteria 1131
43 Ga0070704_101286937 3300005549 Bacteria 669
44 Ga0068855_100188415 3300005563 Bacteria 2328
45 Ga0068857_100682504 3300005577 Bacteria 975
46 Ga0068856_100031470 3300005614 Bacteria 5191
47 Ga0070702_100779956 3300005615 Unclassified 737
48 Ga0068852_100004159 3300005616 Bacteria 10196
49 Ga0068859_100013310 3300005617 Bacteria 8254
50 Ga0068863_100641333 3300005841 Bacteria 1053
51 Ga0081538_10000211 3300005981 Bacteria 64921
52 Ga0081538_10000229 3300005981 Bacteria 63078
53 Ga0081538_10000959 3300005981 Bacteria 30827
54 Ga0081538_10001356 3300005981 Bacteria 25202
55 Ga0081538_10002012 3300005981 Bacteria 20319
56 Ga0081538_10004566 3300005981 Bacteria 12744
57 Ga0081538_10005011 3300005981 Bacteria 12062
58 Ga0081538_10005940 3300005981 Bacteria 10867
59 Ga0081538_10009976 3300005981 Bacteria 7839
60 Ga0081538_10014732 3300005981 Bacteria 6101
61 Ga0081538_10014783 3300005981 Bacteria 6085
62 Ga0081538_10014994 3300005981 Bacteria 6030
63 Ga0081538_10017157 3300005981 Bacteria 5508
64 Ga0075365_10514113 3300006038 Bacteria 846
65 Ga0070716_100052388 3300006173 Bacteria 2323
66 Ga0075428_100423985 3300006844 Bacteria 1425
67 Ga0075430_100001083 3300006846 Bacteria 21605
68 Ga0075430_100016427 3300006846 Bacteria 6301
69 Ga0075431_100004755 3300006847 Bacteria 13352
70 Ga0075431_100095627 3300006847 Bacteria 3066
71 Ga0075431_100315029 3300006847 Bacteria 1578
72 Ga0075433_10506331 3300006852 Bacteria 1062
73 Ga0075429_100374432 3300006880 Bacteria 1247
74 Ga0075429_100388098 3300006880 Bacteria 1223
75 Ga0068865_101057321 3300006881 Bacteria 713
76 Ga0097620_100013310 3300006931 Bacteria 8254
77 Ga0105240_10008822 3300009093 Bacteria 14360
78 Ga0105240_10036210 3300009093 Bacteria 6350
79 Ga0105240_11067004 3300009093 Bacteria 861
80 Ga0111539_10068825 3300009094 Bacteria 4179
81 Ga0111539_10691970 3300009094 Bacteria 1187
82 Ga0105245_10023087 3300009098 Bacteria 5459
83 Ga0114129_10043867 3300009147 Bacteria 6292
84 Ga0114129_10298506 3300009147 Bacteria 2148
85 Ga0114129_10403075 3300009147 Bacteria 1802
86 Ga0114129_10662113 3300009147 Bacteria 1346
87 Ga0105243_10766594 3300009148 Bacteria 947
88 Ga0105237_10000014 3300009545 Bacteria 293492
89 Ga0105238_10037530 3300009551 Bacteria 4925
90 Ga0105249_10020207 3300009553 Bacteria 5952
91 Ga0105239_10026286 3300010375 Bacteria 6407
92 Ga0105239_10118422 3300010375 Bacteria 2939
93 Ga0105239_11862604 3300010375 Bacteria 697
94 Ga0157370_10032233 3300013104 Bacteria 5118
95 Ga0157369_10345685 3300013105 Bacteria 1545
96 Ga0163162_10269615 3300013306 Bacteria 1834
97 Ga0157372_11047216 3300013307 Bacteria 944
98 Ga0157372_11332963 3300013307 Bacteria 828
99 Ga0157380_10629689 3300014326 Bacteria 1066
100 Ga0157379_10044011 3300014968 Bacteria 3986
101 Ga0206356_10382292 3300020070 Bacteria 1250
102 Ga0206354_11089628 3300020081 Bacteria 2028
103 Ga0207642_10030773 3300025899 Bacteria 2240
104 Ga0207680_10126557 3300025903 Bacteria 1678
105 Ga0207705_10002726 3300025909 Bacteria 13534
106 Ga0207707_10267602 3300025912 Bacteria 1482
107 Ga0207707_10385246 3300025912 Bacteria 1205
108 Ga0207695_10011454 3300025913 Bacteria 10740
109 Ga0207671_10000270 3300025914 Bacteria 77396
110 Ga0207663_10111400 3300025916 Bacteria 1857
111 Ga0207660_10039007 3300025917 Bacteria 3318
112 Ga0207662_10009952 3300025918 Bacteria 5246
113 Ga0207662_10418757 3300025918 Bacteria 911
114 Ga0207657_10015117 3300025919 Bacteria 7495
115 Ga0207657_10240416 3300025919 Bacteria 1446
116 Ga0207649_10041756 3300025920 Bacteria 2793
117 Ga0207652_10006564 3300025921 Bacteria 9376
118 Ga0207652_10034141 3300025921 Bacteria 4286
119 Ga0207681_10477684 3300025923 Bacteria 1018
120 Ga0207694_10002892 3300025924 Bacteria 13806
121 Ga0207659_10033085 3300025926 Bacteria 3555
122 Ga0207687_10011002 3300025927 Bacteria 5913
123 Ga0207690_10020859 3300025932 Bacteria 4055
124 Ga0207690_10050079 3300025932 Bacteria 2787
125 Ga0207690_10704315 3300025932 Bacteria 830
126 Ga0207706_10001392 3300025933 Bacteria 24155
127 Ga0207670_10000011 3300025936 Bacteria 266639
128 Ga0207670_10022654 3300025936 Bacteria 3896
129 Ga0207665_10279865 3300025939 Bacteria 1241
130 Ga0207691_10402992 3300025940 Bacteria 1167
131 Ga0207661_10002447 3300025944 Bacteria 12775
132 Ga0207661_10134543 3300025944 Bacteria 2122
133 Ga0207679_10767907 3300025945 Bacteria 877
134 Ga0207667_10189858 3300025949 Bacteria 2108
135 Ga0207667_10706184 3300025949 Bacteria 1010
136 Ga0207651_10000844 3300025960 Bacteria 13317
137 Ga0207651_10001560 3300025960 Bacteria 10481
138 Ga0207668_10965536 3300025972 Bacteria 760
139 Ga0207640_10225548 3300025981 Bacteria 1438
140 Ga0207640_10235060 3300025981 Bacteria 1412
141 Ga0207658_10062817 3300025986 Bacteria 2781
142 Ga0207677_10096079 3300026023 Bacteria 2167
143 Ga0207639_10000732 3300026041 Bacteria 22435
144 Ga0207708_10158674 3300026075 Bacteria 1785
145 Ga0207708_10207537 3300026075 Bacteria 1565
146 Ga0207708_10371952 3300026075 Bacteria 1177
147 Ga0207708_10465799 3300026075 Bacteria 1055
148 Ga0207702_10034826 3300026078 Bacteria 4212
149 Ga0207641_10473628 3300026088 Bacteria 1213
150 Ga0207674_10055510 3300026116 Bacteria 4026
151 Ga0207674_10149468 3300026116 Bacteria 2293
152 Ga0207674_10621987 3300026116 Bacteria 1043
153 Ga0207683_10036959 3300026121 Bacteria 4252
154 Ga0207683_10046297 3300026121 Bacteria 3806
155 Ga0207698_10229951 3300026142 Bacteria 1683
156 Ga0207428_10044644 3300027907 Bacteria 3574
157 Ga0207428_10107349 3300027907 Bacteria 2151
158 Ga0268265_10037498 3300028380 Bacteria 3559
159 Ga0265319_1104557 3300028563 Bacteria 888
160 Ga0265334_10086452 3300028573 Bacteria 1149
161 Ga0265318_10000001 3300028577 Bacteria 500711
162 Ga0265330_10000002 3300031235 Bacteria 481237
163 Ga0265332_10000248 3300031238 Bacteria 43132
164 Ga0265328_10011403 3300031239 Bacteria 3552
165 Ga0265320_10000007 3300031240 Bacteria 331219
166 Ga0265329_10003916 3300031242 Bacteria 6369
167 Ga0265339_10006864 3300031249 Bacteria 7418
168 Ga0265339_10115678 3300031249 Bacteria 1383
169 Ga0265331_10000001 3300031250 Bacteria 798836
170 Ga0265316_10013207 3300031344 Bacteria 7356
171 Ga0265316_10270610 3300031344 Unclassified 1243
172 Ga0307408_100432978 3300031548 Bacteria 1137
173 Ga0307408_100641973 3300031548 Bacteria 948
174 Ga0265313_10000051 3300031595 Bacteria 111381
175 Ga0265313_10004959 3300031595 Bacteria 9959
176 Ga0265313_10044190 3300031595 Bacteria 2176
177 Ga0265313_10093809 3300031595 Bacteria 1342
178 Ga0265314_10000006 3300031711 Bacteria 540431
179 Ga0307405_10405455 3300031731 Bacteria 1068
180 Ga0307410_10017190 3300031852 Bacteria 4336
181 Ga0307406_10691655 3300031901 Bacteria 850
182 Ga0307407_10017463 3300031903 Bacteria 3601
183 Ga0307407_10022535 3300031903 Bacteria 3270
184 Ga0307407_10238404 3300031903 Bacteria 1239
185 Ga0307409_100031442 3300031995 Bacteria 3831
186 Ga0307409_100064383 3300031995 Bacteria 2880
187 Ga0307409_100095132 3300031995 Bacteria 2453
188 Ga0307409_100095706 3300031995 Bacteria 2447
189 Ga0307409_100296907 3300031995 Bacteria 1501
190 Ga0307409_100374972 3300031995 Bacteria 1350
191 Ga0307409_100408391 3300031995 Bacteria 1299
192 Ga0307416_100001955 3300032002 Bacteria 11550
193 Ga0307416_100011246 3300032002 Bacteria 5952
194 Ga0307416_100380019 3300032002 Bacteria 1442
195 Ga0307414_10198690 3300032004 Bacteria 1629
196 Ga0307411_10086621 3300032005 Unclassified 2173
197 Ga0307411_10605799 3300032005 Bacteria 942
198 Ga0307411_11152547 3300032005 Bacteria 701
199 Ga0307415_100098116 3300032126 Bacteria 2140
200 Ga0307415_100165554 3300032126 Bacteria 1718
201 Ga0373950_0000015 3300034818 Bacteria 281101
202 Ga0373950_0000023 3300034818 Bacteria 197381
203 Ga0373929_0062462 3300035085 Bacteria 875
204 Ga0373934_0139940 3300035086 Bacteria 989
205 Ga0373952_0063647 3300035092 Bacteria 908
206 Ga0373939_0071731 3300035114 Bacteria 1129
207 Ga0373941_0117048 3300035115 Bacteria 946
208 Ga0373954_0029225 3300035118 Bacteria 2538
209 Ga0373954_0075359 3300035118 Bacteria 1607
210 Ga0373946_0263214 3300035171 Bacteria 844
211 Ga0373946_0355469 3300035171 Bacteria 733
212 Ga0373946_0391527 3300035171 Bacteria 700
213 Ga0373955_0003292 3300035172 Bacteria 7087
214 Ga0373942_0180881 3300035207 Bacteria 691
215 Ga0373933_0001132 3300035724 Bacteria 15827
216 Ga0373933_0003557 3300035724 Bacteria 8661
217 Ga0373937_0010042 3300036401 Bacteria 8253
218 Ga0373937_0029956 3300036401 Bacteria 4929
219 Ga0373925_0048912 3300037068 Bacteria 3151
220 Ga0373925_0184603 3300037068 Bacteria 1653
221 Ga0395901_0126226 3300038443 Bacteria 2689
222 Ga0436365_0343257 3300039437 Bacteria 4528
223 Ga0439463_063075 3300042016 Bacteria 947
224 Ga0439464_0071276 3300042439 Bacteria 1028
225 Ga0439460_0072999 3300042461 Bacteria 1066
226 Ga0466963_0151165 3300044694 Bacteria 1612
227 Ga0466963_0335170 3300044694 Bacteria 1065
228 Ga0466967_0000450 3300045976 Bacteria 19719
229 Ga0466967_0070410 3300045976 Bacteria 3129
230 Ga0466967_0083603 3300045976 Bacteria 2887
231 Ga0466967_0686454 3300045976 Bacteria 1014
232 Ga0466967_0847587 3300045976 Bacteria 908
233 Ga0495584_0214011 3300046491 Bacteria 980
234 Ga0495596_0041138 3300046500 Bacteria 1823
235 Ga0495644_0122701 3300046523 Bacteria 989
236 Ga0495644_0223155 3300046523 Bacteria 729
237 Ga0495663_0029965 3300046525 Bacteria 1610
238 Ga0495668_0268726 3300046616 Bacteria 934
239 Ga0495670_0512195 3300046691 Bacteria 652
240 Ga0495672_0021884 3300047320 Bacteria 4164
241 Ga0495672_0338198 3300047320 Bacteria 702
242 Ga0495676_0290796 3300047321 Bacteria 1104
243 Ga0496101_0077355 3300048904 Bacteria 2452
244 Ga0496102_0194457 3300048905 Bacteria 1912
245 Ga0496104_0065834 3300048907 Bacteria 3440
246 Ga0496104_0081704 3300048907 Bacteria 3082
247 Ga0496105_0653971 3300048908 Bacteria 811
248 Ga0496109_0259993 3300048912 Bacteria 1635
249 Ga0496112_0016955 3300048915 Bacteria 6836
250 Ga0496112_0298698 3300048915 Bacteria 1556
251 Ga0496113_0093994 3300048916 Bacteria 2316
252 Ga0496114_0000037 3300048917 Bacteria 142233
253 Ga0496114_0008016 3300048917 Bacteria 8359
254 Ga0496114_0089029 3300048917 Bacteria 2619
255 Ga0496115_0003323 3300048918 Bacteria 11546
256 Ga0496115_0204124 3300048918 Bacteria 1633
257 Ga0501033_0274664 3300049570 Bacteria 1191
258 Ga0501034_0000126 3300049571 Bacteria 142226
259 Ga0501036_0065937 3300049572 Bacteria 3063
260 Ga0501036_0134499 3300049572 Bacteria 2087
261 Ga0501036_0159349 3300049572 Bacteria 1903
262 Ga0501036_0159572 3300049572 Bacteria 1902
263 Ga0501038_0184230 3300049574 Bacteria 1683
264 Ga0501039_0129264 3300049575 Bacteria 1982
265 Ga0501039_0413487 3300049575 Bacteria 1059
266 Ga0501040_0053131 3300049576 Bacteria 2774
267 Ga0501040_0164161 3300049576 Bacteria 1571
268 Ga0501041_0246821 3300049577 Bacteria 1122
269 Ga0501042_0142477 3300049578 Bacteria 1728
270 Ga0501042_0333809 3300049578 Bacteria 1096
271 Ga0501042_0400138 3300049578 Bacteria 995
272 Ga0501043_0000222 3300049579 Bacteria 51584
273 Ga0501046_0001080 3300049580 Bacteria 26709
274 Ga0501046_0322338 3300049580 Bacteria 1126
275 Ga0501047_0000008 3300049581 Bacteria 441758
276 Ga0501048_0002251 3300049582 Bacteria 14705
277 Ga0501048_0107469 3300049582 Bacteria 1970
278 Ga0501048_0318792 3300049582 Bacteria 1107
279 Ga0501067_0000026 3300049583 Bacteria 90750
280 Ga0501067_0004558 3300049583 Bacteria 7663
281 Ga0501067_0004826 3300049583 Bacteria 7477
282 Ga0501067_0094603 3300049583 Bacteria 1659
283 Ga0501068_0008741 3300049584 Bacteria 5650
284 Ga0501069_0064711 3300049585 Bacteria 2044
285 Ga0501069_0096694 3300049585 Bacteria 1673
286 Ga0501070_0000052 3300049586 Bacteria 101405
287 Ga0501070_0002011 3300049586 Bacteria 17866
288 Ga0501071_0098840 3300049587 Bacteria 2150
289 Ga0501072_0000023 3300049588 Bacteria 149177
290 Ga0501072_0017959 3300049588 Bacteria 5438
291 Ga0501072_0184212 3300049588 Bacteria 1666
292 Ga0501073_0000900 3300049589 Bacteria 21337
293 Ga0501073_0001410 3300049589 Bacteria 17717
294 Ga0501073_0001975 3300049589 Bacteria 15288
295 Ga0501073_0007764 3300049589 Bacteria 7967
296 Ga0501073_0020413 3300049589 Bacteria 4778
297 Ga0501073_0024096 3300049589 Bacteria 4370
298 Ga0501074_0000558 3300049590 Bacteria 23014
299 Ga0501074_0456241 3300049590 Bacteria 906
300 Ga0501074_0498334 3300049590 Bacteria 863
301 Ga0501075_0039624 3300049591 Bacteria 3526
302 Ga0501075_0093684 3300049591 Bacteria 2280
303 Ga0501075_0523482 3300049591 Bacteria 905
304 Ga0501076_0357587 3300049592 Bacteria 1199
305 Ga0501077_0062489 3300049593 Bacteria 2363
306 Ga0501077_0150345 3300049593 Bacteria 1477
307 Ga0501077_0202202 3300049593 Bacteria 1262
308 Ga0501079_0000006 3300049741 Bacteria 77063
309 Ga0501079_0214882 3300049741 Bacteria 1502
310 Ga0501080_0002358 3300049742 Bacteria 16464
311 Ga0501080_0012223 3300049742 Bacteria 7867
312 Ga0501080_0018948 3300049742 Bacteria 6375
313 Ga0501080_0061598 3300049742 Bacteria 3493
314 Ga0501080_0161344 3300049742 Bacteria 2070
315 Ga0501080_0229073 3300049742 Bacteria 1699
316 Ga0501080_0367734 3300049742 Bacteria 1297
317 Ga0501080_0499650 3300049742 Bacteria 1087
318 Ga0501081_0045706 3300049743 Bacteria 3007
319 Ga0501081_0254437 3300049743 Bacteria 1282
320 Ga0501083_0008907 3300049744 Bacteria 7087
321 Ga0501083_0010653 3300049744 Bacteria 6471
322 Ga0501045_0026917 3300049824 Bacteria 4140
323 Ga0501045_0564818 3300049824 Bacteria 843
324 nmdc:mga05p37_199234_c1 3300050507 Bacteria 2426
325 nmdc:mga05p37_251911_c1 3300050507 Bacteria 2117
326 nmdc:mga05p37_279752_c1 3300050507 Bacteria 1990
327 nmdc:mga05p37_4883_c1 3300050507 Bacteria 15693
328 nmdc:mga05p37_932397_c1 3300050507 Bacteria 932
329 nmdc:mga09592_38917_c1 3300050508 Bacteria 3993
330 nmdc:mga0qj67_133789_c1 3300050509 Bacteria 2009
331 nmdc:mga0qj67_6254_c1 3300050509 Bacteria 8736
332 nmdc:mga06r32_216328_c1 3300050510 Bacteria 1904
333 nmdc:mga06r32_700181_c1 3300050510 Bacteria 979
334 nmdc:mga08y16_1264902_c1 3300050511 Bacteria 706
335 nmdc:mga08y16_18437_c1 3300050511 Bacteria 7354
336 nmdc:mga08y16_259654_c1 3300050511 Bacteria 1794
337 Ga0495655_0055085 3300053083 Bacteria 1066
338 Ga0495655_0100059 3300053083 Bacteria 857
339 Ga0501084_0000002 3300054114 Bacteria 273420
340 Ga0501084_0310835 3300054114 Bacteria 1331
341 Ga0501084_0546906 3300054114 Bacteria 978
342 Ga0501084_0765189 3300054114 Bacteria 814
343 Ga0501082_0004107 3300060353 Bacteria 12717
344 Ga0501082_0004229 3300060353 Bacteria 12539
345 Ga0501082_0355843 3300060353 Bacteria 1277
346 Ga0501082_0943858 3300060353 Bacteria 754
347 Ga0530510_0006675 3300061734 Bacteria 8048
348 Ga0530510_0065205 3300061734 Bacteria 2639
349 Ga0207689_10219845
350 JGI25407J50210_10001712
351 JGI25407J50210_10025033
352 JGI25407J50210_10123396
353 Ga0070658_10000894
354 Ga0070676_10020225
355 Ga0070690_100179013
356 Ga0070680_100024749
357 Ga0070682_100265063
358 Ga0068868_100098806
359 Ga0070660_100009064
360 Ga0070660_100125097
361 Ga0070689_100049151
362 Ga0070691_10187042
363 Ga0070661_100361692
364 Ga0070668_100009242
365 Ga0070675_100175988
366 Ga0070675_100404903
367 Ga0070673_100001923
368 Ga0070673_100010486
369 Ga0070688_100007335
370 Ga0070688_100379227
371 Ga0070659_100107165
372 Ga0070667_100400085
373 Ga0070710_10702181
374 Ga0070678_100027887
375 Ga0070681_10339739
376 Ga0070685_10043884
377 Ga0070699_100162609
378 Ga0070679_100024619
379 Ga0070679_100107727
380 Ga0070684_100015371
381 Ga0070684_100167030
382 Ga0070684_100172997
383 Ga0070684_100299306
384 Ga0068853_100000336
385 Ga0068853_100687027
386 Ga0070672_100130628
387 Ga0070686_100220895
388 Ga0070686_100361269
389 Ga0070695_100116867
390 Ga0070695_100333796
391 Ga0070704_101286937
392 Ga0068855_100188415
393 Ga0068857_100682504
394 Ga0068856_100031470
395 Ga0070702_100779956
396 Ga0068852_100004159
397 Ga0068859_100013310
398 Ga0068863_100641333
399 Ga0081538_10000211
400 Ga0081538_10000229
401 Ga0081538_10000959
402 Ga0081538_10001356
403 Ga0081538_10002012
404 Ga0081538_10004566
405 Ga0081538_10005011
406 Ga0081538_10005940
407 Ga0081538_10009976
408 Ga0081538_10014732
409 Ga0081538_10014783
410 Ga0081538_10014994
411 Ga0081538_10017157
412 Ga0075365_10514113
413 Ga0070716_100052388
414 Ga0075428_100423985
415 Ga0075430_100001083
416 Ga0075430_100016427
417 Ga0075431_100004755
418 Ga0075431_100095627
419 Ga0075431_100315029
420 Ga0075433_10506331
421 Ga0075429_100374432
422 Ga0075429_100388098
423 Ga0068865_101057321
424 Ga0097620_100013310
425 Ga0105240_10008822
426 Ga0105240_10036210
427 Ga0105240_11067004
428 Ga0111539_10068825
429 Ga0111539_10691970
430 Ga0105245_10023087
431 Ga0114129_10043867
432 Ga0114129_10298506
433 Ga0114129_10403075
434 Ga0114129_10662113
435 Ga0105243_10766594
436 Ga0105237_10000014
437 Ga0105238_10037530
438 Ga0105249_10020207
439 Ga0105239_10026286
440 Ga0105239_10118422
441 Ga0105239_11862604
442 Ga0157370_10032233
443 Ga0157369_10345685
444 Ga0163162_10269615
445 Ga0157372_11047216
446 Ga0157372_11332963
447 Ga0157380_10629689
448 Ga0157379_10044011
449 Ga0206356_10382292
450 Ga0206354_11089628
451 Ga0207642_10030773
452 Ga0207680_10126557
453 Ga0207705_10002726
454 Ga0207707_10267602
455 Ga0207707_10385246
456 Ga0207695_10011454
457 Ga0207671_10000270
458 Ga0207663_10111400
459 Ga0207660_10039007
460 Ga0207662_10009952
461 Ga0207662_10418757
462 Ga0207657_10015117
463 Ga0207657_10240416
464 Ga0207649_10041756
465 Ga0207652_10006564
466 Ga0207652_10034141
467 Ga0207681_10477684
468 Ga0207694_10002892
469 Ga0207659_10033085
470 Ga0207687_10011002
471 Ga0207690_10020859
472 Ga0207690_10050079
473 Ga0207690_10704315
474 Ga0207706_10001392
475 Ga0207670_10000011
476 Ga0207670_10022654
477 Ga0207665_10279865
478 Ga0207691_10402992
479 Ga0207661_10002447
480 Ga0207661_10134543
481 Ga0207679_10767907
482 Ga0207667_10189858
483 Ga0207667_10706184
484 Ga0207651_10000844
485 Ga0207651_10001560
486 Ga0207668_10965536
487 Ga0207640_10225548
488 Ga0207640_10235060
489 Ga0207658_10062817
490 Ga0207677_10096079
491 Ga0207639_10000732
492 Ga0207708_10158674
493 Ga0207708_10207537
494 Ga0207708_10371952
495 Ga0207708_10465799
496 Ga0207702_10034826
497 Ga0207641_10473628
498 Ga0207674_10055510
499 Ga0207674_10149468
500 Ga0207674_10621987
501 Ga0207683_10036959
502 Ga0207683_10046297
503 Ga0207698_10229951
504 Ga0207428_10044644
505 Ga0207428_10107349
506 Ga0268265_10037498
507 Ga0265319_1104557
508 Ga0265334_10086452
509 Ga0265318_10000001
510 Ga0265330_10000002
511 Ga0265332_10000248
512 Ga0265328_10011403
513 Ga0265320_10000007
514 Ga0265329_10003916
515 Ga0265339_10006864
516 Ga0265339_10115678
517 Ga0265331_10000001
518 Ga0265316_10013207
519 Ga0265316_10270610
520 Ga0307408_100432978
521 Ga0307408_100641973
522 Ga0265313_10000051
523 Ga0265313_10004959
524 Ga0265313_10044190
525 Ga0265313_10093809
526 Ga0265314_10000006
527 Ga0307405_10405455
528 Ga0307410_10017190
529 Ga0307406_10691655
530 Ga0307407_10017463
531 Ga0307407_10022535
532 Ga0307407_10238404
533 Ga0307409_100031442
534 Ga0307409_100064383
535 Ga0307409_100095132
536 Ga0307409_100095706
537 Ga0307409_100296907
538 Ga0307409_100374972
539 Ga0307409_100408391
540 Ga0307416_100001955
541 Ga0307416_100011246
542 Ga0307416_100380019
543 Ga0307414_10198690
544 Ga0307411_10086621
545 Ga0307411_10605799
546 Ga0307411_11152547
547 Ga0307415_100098116
548 Ga0307415_100165554
549 Ga0373950_0000015
550 Ga0373950_0000023
551 Ga0373929_0062462
552 Ga0373934_0139940
553 Ga0373952_0063647
554 Ga0373939_0071731
555 Ga0373941_0117048
556 Ga0373954_0029225
557 Ga0373954_0075359
558 Ga0373946_0263214
559 Ga0373946_0355469
560 Ga0373946_0391527
561 Ga0373955_0003292
562 Ga0373942_0180881
563 Ga0373933_0001132
564 Ga0373933_0003557
565 Ga0373937_0010042
566 Ga0373937_0029956
567 Ga0373925_0048912
568 Ga0373925_0184603
569 Ga0395901_0126226
570 Ga0436365_0343257
571 Ga0439463_063075
572 Ga0439464_0071276
573 Ga0439460_0072999
574 Ga0466963_0151165
575 Ga0466963_0335170
576 Ga0466967_0000450
577 Ga0466967_0070410
578 Ga0466967_0083603
579 Ga0466967_0686454
580 Ga0466967_0847587
581 Ga0495584_0214011
582 Ga0495596_0041138
583 Ga0495644_0122701
584 Ga0495644_0223155
585 Ga0495663_0029965
586 Ga0495668_0268726
587 Ga0495670_0512195
588 Ga0495672_0021884
589 Ga0495672_0338198
590 Ga0495676_0290796
591 Ga0496101_0077355
592 Ga0496102_0194457
593 Ga0496104_0065834
594 Ga0496104_0081704
595 Ga0496105_0653971
596 Ga0496109_0259993
597 Ga0496112_0016955
598 Ga0496112_0298698
599 Ga0496113_0093994
600 Ga0496114_0000037
601 Ga0496114_0008016
602 Ga0496114_0089029
603 Ga0496115_0003323
604 Ga0496115_0204124
605 Ga0501033_0274664
606 Ga0501034_0000126
607 Ga0501036_0065937
608 Ga0501036_0134499
609 Ga0501036_0159349
610 Ga0501036_0159572
611 Ga0501038_0184230
612 Ga0501039_0129264
613 Ga0501039_0413487
614 Ga0501040_0053131
615 Ga0501040_0164161
616 Ga0501041_0246821
617 Ga0501042_0142477
618 Ga0501042_0333809
619 Ga0501042_0400138
620 Ga0501043_0000222
621 Ga0501046_0001080
622 Ga0501046_0322338
623 Ga0501047_0000008
624 Ga0501048_0002251
625 Ga0501048_0107469
626 Ga0501048_0318792
627 Ga0501067_0000026
628 Ga0501067_0004558
629 Ga0501067_0004826
630 Ga0501067_0094603
631 Ga0501068_0008741
632 Ga0501069_0064711
633 Ga0501069_0096694
634 Ga0501070_0000052
635 Ga0501070_0002011
636 Ga0501071_0098840
637 Ga0501072_0000023
638 Ga0501072_0017959
639 Ga0501072_0184212
640 Ga0501073_0000900
641 Ga0501073_0001410
642 Ga0501073_0001975
643 Ga0501073_0007764
644 Ga0501073_0020413
645 Ga0501073_0024096
646 Ga0501074_0000558
647 Ga0501074_0456241
648 Ga0501074_0498334
649 Ga0501075_0039624
650 Ga0501075_0093684
651 Ga0501075_0523482
652 Ga0501076_0357587
653 Ga0501077_0062489
654 Ga0501077_0150345
655 Ga0501077_0202202
656 Ga0501079_0000006
657 Ga0501079_0214882
658 Ga0501080_0002358
659 Ga0501080_0012223
660 Ga0501080_0018948
661 Ga0501080_0061598
662 Ga0501080_0161344
663 Ga0501080_0229073
664 Ga0501080_0367734
665 Ga0501080_0499650
666 Ga0501081_0045706
667 Ga0501081_0254437
668 Ga0501083_0008907
669 Ga0501083_0010653
670 Ga0501045_0026917
671 Ga0501045_0564818
672 nmdc:mga05p37_199234_c1
673 nmdc:mga05p37_251911_c1
674 nmdc:mga05p37_279752_c1
675 nmdc:mga05p37_4883_c1
676 nmdc:mga05p37_932397_c1
677 nmdc:mga09592_38917_c1
678 nmdc:mga0qj67_133789_c1
679 nmdc:mga0qj67_6254_c1
680 nmdc:mga06r32_216328_c1
681 nmdc:mga06r32_700181_c1
682 nmdc:mga08y16_1264902_c1
683 nmdc:mga08y16_18437_c1
684 nmdc:mga08y16_259654_c1
685 Ga0495655_0055085
686 Ga0495655_0100059
687 Ga0501084_0000002
688 Ga0501084_0310835
689 Ga0501084_0546906
690 Ga0501084_0765189
691 Ga0501082_0004107
692 Ga0501082_0004229
693 Ga0501082_0355843
694 Ga0501082_0943858
695 Ga0530510_0006675
696 Ga0530510_0065205

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08279

HTH_11

HTH domain

6

59

0.96

PF01330

RuvA_N

RuvA N terminal domain

39

94

0.92

PF14520

HHH_5

Helix-hairpin-helix domain

104

162

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1d8l-assembly1.cif.gz_A e. coli holliday junction binding protein ruva nh2 region lacking domain iii 0.9659 1 134
7pbp-assembly1.cif.gz_H ruvab branch migration motor complexed to the holliday junction - ruvb aaa+ state s5 [t2 dataset] 0.9552 149 192
2zte-assembly1.cif.gz_A mtruva form iv 0.9391 2 131
7pbu-assembly1.cif.gz_F ruvab branch migration motor complexed to the holliday junction - ruva-hj core [t2 dataset] 0.9373 1 132
7x7q-assembly1.cif.gz_G cryoem structure of ruva-ruvb-holliday junction complex 0.9272 1 134
ID Description Score Start End Superfamily
1hjpA02 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9718 68 134 1.10.150.20
1d8lB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9602 1 65 2.40.50.140
2ztdA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9489 2 63 2.40.50.140
1ixrB01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9466 1 63 2.40.50.140
1d8lB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9462 1 65 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A455U7G5-F1-model_v4 DNA helicase Holliday junction RuvA type domain-containing protein 0.9859 2 73 GO:0003677
GO:0005524
GO:0006281
GO:0006310
GO:0009378
AF-A0A3D1XZW5-F1-model_v4 deleted 0.9824 1 79
AF-A0A7K0PNB6-F1-model_v4 DNA helicase Holliday junction RuvA type domain-containing protein 0.9822 1 113 GO:0003677
GO:0005524
GO:0005737
GO:0006281
GO:0006310
GO:0009378
AF-A0A519MJ88-F1-model_v4 Holliday junction branch migration protein RuvA 0.9756 1 131 GO:0003677
GO:0005524
GO:0005737
GO:0006281
GO:0006310
GO:0009378
AF-A0A7W0GTI9-F1-model_v4 Holliday junction branch migration protein RuvA 0.9748 1 117 GO:0003677
GO:0005524
GO:0005737
GO:0006281
GO:0006310
GO:0009378

Map