F416591

General Info

Members Datasets Scaffolds Average Seq Length
345 206 690 228

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2895442618|2895443167
Length 235
Sequence GSKSRAAYEWIRERIETGRFTPGYRLVLDAIAREIGISAVPVREAIRLLEAEGLVTFERNVGAQVAFMHEQEYEYTMQTLALVEGAATALSAPRLTGDHIARARSINDQLADSLKLESFDPRRFTELNLAFHTVLFQKCPNPHIADLVGRGWKRLTVLRDSVFGFVPGRARESVGEHEALLRLIEAGEAPLTIELAARDHRLGTLHAVLAYQAGRRHAAPAVGRNPSTHLTREQP

Samples

Sample ID Description Type Environment
1 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
52 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
63 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
69 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
70 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
71 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
72 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
73 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
74 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
75 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
76 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
77 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
78 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
79 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
80 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
81 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
82 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
83 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
88 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
89 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
90 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
91 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
96 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
97 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
100 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
101 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
106 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
109 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
110 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
126 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
127 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
128 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
129 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
147 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
150 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
155 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
156 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
157 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
158 2643221572 Leifsonia sp. Root60 Isolate Unclassified
159 2643221630 Microbacterium sp. Root322 Isolate Unclassified
160 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
161 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
162 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
163 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
164 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
165 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
166 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
167 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
168 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
169 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
170 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
171 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
172 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
173 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
174 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
175 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
176 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
177 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
178 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
179 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
180 2919069694 Microbacterium sp. 1154 Isolate Unclassified
181 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
182 2919395869 Microbacterium resistens 2980 Isolate Unclassified
183 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
184 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
185 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
186 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
187 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
188 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
189 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
190 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
191 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
192 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
193 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
194 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
195 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
196 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
197 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
198 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
199 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
200 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
201 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
202 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
203 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
204 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
205 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
206 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.64
Metatranscriptomes 0
Isolates 15.36

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 2.61
Nodule 0
Rhizoplane 9.57
Rhizosphere 76.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1008119 3300000549 Bacteria 1282
2 JGI24740J21852_10004993 3300001979 Bacteria 5637
3 JGI24739J22299_10110918 3300001989 Bacteria 823
4 JGI25152J39213_1000286 3300002773 Bacteria 33541
5 rootH1_10117057 3300003316 Bacteria 1715
6 Ga0055540_1032619 3300003792 Bacteria 1187
7 Ga0070670_100282867 3300005331 Bacteria 1448
8 Ga0070666_10098190 3300005335 Bacteria 2016
9 Ga0070669_100040488 3300005353 Bacteria 3387
10 Ga0070673_100045724 3300005364 Bacteria 3397
11 Ga0070678_100184959 3300005456 Bacteria 1709
12 Ga0070678_100394023 3300005456 Bacteria 1201
13 Ga0068853_100380890 3300005539 Bacteria 1317
14 Ga0070672_100257089 3300005543 Bacteria 1472
15 Ga0070702_100456522 3300005615 Bacteria 928
16 Ga0068852_100000260 3300005616 Bacteria 35545
17 Ga0068863_100075866 3300005841 Bacteria 3181
18 Ga0075432_10026862 3300006058 Bacteria 1979
19 Ga0075370_10190912 3300006353 Bacteria 1207
20 Ga0105244_10018690 3300009036 Bacteria 3882
21 Ga0105244_10029525 3300009036 Bacteria 2929
22 Ga0105244_10176005 3300009036 Bacteria 1016
23 Ga0105243_10189450 3300009148 Bacteria 1795
24 Ga0105243_10311936 3300009148 Bacteria 1430
25 Ga0105248_10000365 3300009177 Bacteria 52722
26 Ga0105248_10909955 3300009177 Bacteria 993
27 Ga0105237_10008852 3300009545 Bacteria 10852
28 Ga0105239_10001219 3300010375 Bacteria 35074
29 Ga0105246_10294297 3300011119 Bacteria 1308
30 Ga0157371_10443019 3300013102 Bacteria 954
31 Ga0157369_10000931 3300013105 Bacteria 37218
32 Ga0171462_1001 3300013250 Bacteria 1135406
33 Ga0157374_10216213 3300013296 Bacteria 1880
34 Ga0163162_10117711 3300013306 Bacteria 2759
35 Ga0157375_10650286 3300013308 Bacteria 1210
36 Ga0157375_10661672 3300013308 Bacteria 1200
37 Ga0209148_1004994 3300025254 Bacteria 3123
38 Ga0209051_1003000 3300025303 Bacteria 11458
39 Ga0207697_10008844 3300025315 Bacteria 4381
40 Ga0207655_1043942 3300025728 Bacteria 1883
41 Ga0207655_1074143 3300025728 Bacteria 1253
42 Ga0207713_1040759 3300025735 Bacteria 1945
43 Ga0207682_10011453 3300025893 Bacteria 3462
44 Ga0207688_10298254 3300025901 Bacteria 985
45 Ga0207680_10251372 3300025903 Bacteria 1221
46 Ga0207671_10008386 3300025914 Bacteria 8771
47 Ga0207649_10086046 3300025920 Bacteria 2047
48 Ga0207681_10398232 3300025923 Bacteria 1111
49 Ga0207644_10074024 3300025931 Bacteria 2499
50 Ga0207691_10027674 3300025940 Bacteria 5315
51 Ga0207691_10197065 3300025940 Bacteria 1754
52 Ga0207711_10000340 3300025941 Bacteria 49514
53 Ga0207651_10080313 3300025960 Bacteria 2347
54 Ga0207668_10209951 3300025972 Bacteria 1557
55 Ga0207641_10293037 3300026088 Bacteria 1534
56 Ga0207683_10109416 3300026121 Bacteria 2473
57 Ga0207698_10000295 3300026142 Bacteria 30103
58 Ga0207428_10079514 3300027907 Bacteria 2564
59 Ga0307515_10074055 3300028794 Bacteria 4563
60 Ga0316181_1201650 3300030744 Bacteria 916
61 Ga0307408_100034254 3300031548 Bacteria 3555
62 Ga0307408_100042070 3300031548 Bacteria 3242
63 Ga0307408_100112692 3300031548 Bacteria 2092
64 Ga0307408_100142042 3300031548 Bacteria 1885
65 Ga0307408_100396167 3300031548 Bacteria 1184
66 Ga0307408_100430000 3300031548 Bacteria 1141
67 Ga0307405_10011116 3300031731 Bacteria 4699
68 Ga0307405_10016412 3300031731 Bacteria 4038
69 Ga0307405_10032079 3300031731 Bacteria 3101
70 Ga0307405_10344929 3300031731 Bacteria 1146
71 Ga0307405_10379035 3300031731 Bacteria 1100
72 Ga0307405_10386529 3300031731 Bacteria 1091
73 Ga0307405_10472244 3300031731 Bacteria 999
74 Ga0307405_10572516 3300031731 Bacteria 917
75 Ga0307413_10010309 3300031824 Bacteria 4524
76 Ga0307413_10021998 3300031824 Bacteria 3426
77 Ga0307413_10117263 3300031824 Bacteria 1795
78 Ga0307410_10005301 3300031852 Bacteria 6807
79 Ga0307410_10081478 3300031852 Bacteria 2273
80 Ga0307410_10203960 3300031852 Bacteria 1511
81 Ga0307410_10290783 3300031852 Bacteria 1286
82 Ga0307406_10079998 3300031901 Bacteria 2169
83 Ga0307406_10272115 3300031901 Bacteria 1287
84 Ga0307406_10306738 3300031901 Bacteria 1222
85 Ga0307407_10020607 3300031903 Bacteria 3382
86 Ga0307407_10033909 3300031903 Bacteria 2790
87 Ga0307407_10099279 3300031903 Bacteria 1803
88 Ga0307407_10240922 3300031903 Bacteria 1234
89 Ga0307407_10294346 3300031903 Bacteria 1129
90 Ga0307412_10003396 3300031911 Bacteria 8846
91 Ga0307412_10026719 3300031911 Bacteria 3591
92 Ga0307412_10041939 3300031911 Bacteria 2969
93 Ga0307412_10078575 3300031911 Bacteria 2273
94 Ga0307412_10127628 3300031911 Bacteria 1842
95 Ga0307412_10148180 3300031911 Bacteria 1728
96 Ga0307412_10202161 3300031911 Bacteria 1509
97 Ga0307412_10226335 3300031911 Bacteria 1437
98 Ga0307412_10329950 3300031911 Bacteria 1217
99 Ga0307412_10551149 3300031911 Bacteria 968
100 Ga0307409_100017608 3300031995 Bacteria 4769
101 Ga0307409_100093383 3300031995 Bacteria 2472
102 Ga0307409_100097300 3300031995 Bacteria 2430
103 Ga0307409_100222256 3300031995 Bacteria 1706
104 Ga0307409_100415243 3300031995 Bacteria 1289
105 Ga0307416_100012186 3300032002 Bacteria 5777
106 Ga0307416_100368226 3300032002 Bacteria 1462
107 Ga0307416_100427179 3300032002 Bacteria 1371
108 Ga0307416_100666549 3300032002 Bacteria 1126
109 Ga0307416_100969697 3300032002 Bacteria 952
110 Ga0307416_101028268 3300032002 Bacteria 927
111 Ga0307414_10178690 3300032004 Bacteria 1705
112 Ga0307414_10372372 3300032004 Bacteria 1232
113 Ga0307411_10684644 3300032005 Bacteria 891
114 Ga0307415_100039358 3300032126 Bacteria 3124
115 Ga0307415_100111455 3300032126 Bacteria 2031
116 Ga0307415_100554514 3300032126 Bacteria 1015
117 Ga0395900_0109557 3300037418 Bacteria 2837
118 Ga0395900_0139586 3300037418 Bacteria 2482
119 Ga0395900_0835396 3300037418 Bacteria 847
120 Ga0395898_0091895 3300037466 Bacteria 2919
121 Ga0395901_0110941 3300038443 Bacteria 2880
122 Ga0395901_0439555 3300038443 Bacteria 1335
123 Ga0395901_0965228 3300038443 Bacteria 830
124 Ga0439436_0013753 3300041404 Bacteria 2447
125 Ga0439436_0041893 3300041404 Bacteria 1309
126 Ga0439436_0069638 3300041404 Bacteria 981
127 Ga0439438_008878 3300041405 Bacteria 3292
128 Ga0439466_0049525 3300041411 Bacteria 1379
129 Ga0439433_0002354 3300041999 Bacteria 4002
130 Ga0439442_000059 3300042002 Bacteria 25930
131 Ga0439442_001417 3300042002 Bacteria 4730
132 Ga0439432_025506 3300042006 Bacteria 1939
133 Ga0439449_0000667 3300042007 Bacteria 12998
134 Ga0439449_0003065 3300042007 Bacteria 6512
135 Ga0439452_050895 3300042010 Bacteria 949
136 Ga0439462_0030072 3300042015 Bacteria 1436
137 Ga0450920_000170 3300042122 Bacteria 9173
138 Ga0450920_000928 3300042122 Bacteria 4765
139 Ga0450907_000844 3300042146 Bacteria 7502
140 Ga0450908_017495 3300042184 Bacteria 1272
141 Ga0439434_0000664 3300042435 Bacteria 9888
142 Ga0439434_0009566 3300042435 Bacteria 2852
143 Ga0450918_000633 3300042531 Bacteria 7552
144 Ga0450918_009457 3300042531 Bacteria 1709
145 Ga0466968_0042877 3300044735 Bacteria 1914
146 Ga0466970_0035616 3300044765 Bacteria 2636
147 Ga0466957_0199220 3300044842 Bacteria 1315
148 Ga0466960_0087867 3300044901 Bacteria 1579
149 Ga0466960_0089555 3300044901 Bacteria 1566
150 Ga0466960_0100065 3300044901 Bacteria 1491
151 Ga0466959_0070462 3300045049 Bacteria 2533
152 Ga0466967_0237406 3300045976 Bacteria 1738
153 Ga0495627_000309 3300046453 Bacteria 48100
154 Ga0495582_0074617 3300046473 Bacteria 1878
155 Ga0495639_0016648 3300046475 Bacteria 3192
156 Ga0495664_0035241 3300046477 Bacteria 2946
157 Ga0495630_0712423 3300046517 Bacteria 768
158 Ga0495631_0037368 3300046518 Bacteria 2164
159 Ga0495586_0000669 3300046535 Bacteria 19541
160 Ga0495586_0079937 3300046535 Bacteria 1795
161 Ga0495587_0006025 3300046536 Bacteria 7903
162 Ga0495645_0014983 3300046543 Bacteria 5508
163 Ga0495645_0022414 3300046543 Bacteria 4570
164 Ga0495645_0069824 3300046543 Bacteria 2536
165 Ga0495622_0108944 3300046557 Bacteria 1268
166 Ga0495667_0002436 3300046559 Bacteria 12426
167 Ga0495656_0045527 3300046615 Bacteria 1852
168 Ga0495588_0001018 3300046674 Bacteria 12192
169 Ga0495588_0017003 3300046674 Bacteria 3524
170 Ga0495588_0074691 3300046674 Bacteria 1765
171 Ga0495657_0025645 3300046675 Bacteria 4184
172 Ga0495613_0103101 3300046689 Bacteria 2060
173 Ga0495670_0003615 3300046691 Bacteria 7596
174 Ga0495670_0079103 3300046691 Bacteria 1673
175 Ga0495600_0097957 3300046809 Bacteria 1912
176 Ga0495581_0005743 3300047315 Bacteria 7191
177 Ga0495581_0024492 3300047315 Bacteria 3497
178 Ga0495581_0101144 3300047315 Bacteria 1674
179 Ga0495581_0301975 3300047315 Bacteria 936
180 Ga0495636_0012373 3300047318 Bacteria 3378
181 Ga0495680_0411980 3300047322 Bacteria 931
182 Ga0495675_0184838 3300047444 Bacteria 1274
183 Ga0495593_0013536 3300047673 Bacteria 4651
184 Ga0496100_0005326 3300048903 Bacteria 6915
185 Ga0496100_0355260 3300048903 Bacteria 1107
186 Ga0496100_0489619 3300048903 Bacteria 946
187 Ga0496101_0009827 3300048904 Bacteria 6302
188 Ga0496101_0150558 3300048904 Bacteria 1780
189 Ga0496101_0271672 3300048904 Bacteria 1323
190 Ga0496102_0032197 3300048905 Bacteria 4710
191 Ga0496102_0061185 3300048905 Bacteria 3445
192 Ga0496102_0289868 3300048905 Bacteria 1543
193 Ga0496102_0418431 3300048905 Bacteria 1259
194 Ga0496102_0474186 3300048905 Bacteria 1172
195 Ga0496102_0510407 3300048905 Bacteria 1124
196 Ga0496103_0009772 3300048906 Bacteria 5680
197 Ga0496103_0095396 3300048906 Bacteria 1879
198 Ga0496104_0305428 3300048907 Bacteria 1503
199 Ga0496106_0001192 3300048909 Bacteria 19396
200 Ga0496106_0549621 3300048909 Bacteria 926
201 Ga0496107_0014887 3300048910 Bacteria 5446
202 Ga0496108_0306123 3300048911 Bacteria 1384
203 Ga0496108_0506199 3300048911 Bacteria 1054
204 Ga0496109_0283794 3300048912 Bacteria 1561
205 Ga0496109_0523036 3300048912 Bacteria 1120
206 Ga0496110_0013358 3300048913 Bacteria 6785
207 Ga0496110_0103682 3300048913 Bacteria 2551
208 Ga0496110_0145110 3300048913 Bacteria 2146
209 Ga0496111_0028018 3300048914 Bacteria 3990
210 Ga0496114_0023547 3300048917 Bacteria 5026
211 Ga0496114_0073266 3300048917 Bacteria 2882
212 Ga0496114_0172078 3300048917 Bacteria 1888
213 Ga0496114_0221393 3300048917 Bacteria 1661
214 Ga0496114_0505877 3300048917 Bacteria 1068
215 Ga0496115_0055049 3300048918 Bacteria 3195
216 Ga0496115_0199988 3300048918 Bacteria 1651
217 Ga0496117_0000273 3300048920 Bacteria 96400
218 Ga0496117_0030795 3300048920 Bacteria 4108
219 Ga0496117_0043065 3300048920 Bacteria 3287
220 Ga0496118_0016333 3300048921 Bacteria 6814
221 Ga0496119_0002589 3300048922 Bacteria 19655
222 Ga0496122_0205817 3300048925 Bacteria 1145
223 Ga0496124_0088228 3300048927 Bacteria 2536
224 Ga0496125_0046003 3300048928 Bacteria 3666
225 Ga0496126_0097507 3300048929 Bacteria 2576
226 Ga0496126_0601147 3300048929 Bacteria 867
227 Ga0501032_0009178 3300049569 Bacteria 7171
228 Ga0501032_0145935 3300049569 Bacteria 1557
229 Ga0501032_0155169 3300049569 Bacteria 1504
230 Ga0501033_0001569 3300049570 Bacteria 20162
231 Ga0501034_0000010 3300049571 Bacteria 312213
232 Ga0501034_0000070 3300049571 Bacteria 180933
233 Ga0501034_0002261 3300049571 Bacteria 23626
234 Ga0501034_0011492 3300049571 Bacteria 9177
235 Ga0501034_0036874 3300049571 Bacteria 4951
236 Ga0501034_0041712 3300049571 Bacteria 4643
237 Ga0501034_0115216 3300049571 Bacteria 2676
238 Ga0501034_0301945 3300049571 Bacteria 1537
239 Ga0501036_0046290 3300049572 Bacteria 3683
240 Ga0501037_0020373 3300049573 Bacteria 4896
241 Ga0501037_0026457 3300049573 Bacteria 4289
242 Ga0501037_0037852 3300049573 Bacteria 3556
243 Ga0501037_0043754 3300049573 Bacteria 3290
244 Ga0501037_0114353 3300049573 Bacteria 1942
245 Ga0501038_0063579 3300049574 Bacteria 3149
246 Ga0501038_0094057 3300049574 Bacteria 2506
247 Ga0501038_0103016 3300049574 Bacteria 2374
248 Ga0501038_0212560 3300049574 Bacteria 1546
249 Ga0501038_0212561 3300049574 Bacteria 1546
250 Ga0501039_0044973 3300049575 Bacteria 3410
251 Ga0501039_0139622 3300049575 Bacteria 1903
252 Ga0501039_0205963 3300049575 Bacteria 1546
253 Ga0501042_0127541 3300049578 Bacteria 1832
254 Ga0501043_0011553 3300049579 Bacteria 6913
255 Ga0501043_0067094 3300049579 Bacteria 2817
256 Ga0501043_0076814 3300049579 Bacteria 2624
257 Ga0501043_0152314 3300049579 Bacteria 1809
258 Ga0501043_0154171 3300049579 Bacteria 1797
259 Ga0501043_0260923 3300049579 Bacteria 1332
260 Ga0501046_0030513 3300049580 Bacteria 4375
261 Ga0501046_0054269 3300049580 Bacteria 3153
262 Ga0501047_0011870 3300049581 Bacteria 8240
263 Ga0501047_0028065 3300049581 Bacteria 5424
264 Ga0501047_0042178 3300049581 Bacteria 4410
265 Ga0501047_0050940 3300049581 Bacteria 3998
266 Ga0501048_0329684 3300049582 Bacteria 1087
267 Ga0501069_0085158 3300049585 Bacteria 1783
268 Ga0501069_0186757 3300049585 Bacteria 1199
269 Ga0501070_0009479 3300049586 Bacteria 8231
270 Ga0501070_0104611 3300049586 Bacteria 2340
271 Ga0501070_0135590 3300049586 Bacteria 2033
272 Ga0501070_0151019 3300049586 Bacteria 1916
273 Ga0501071_0000215 3300049587 Bacteria 26394
274 Ga0501073_0061325 3300049589 Bacteria 2624
275 Ga0501073_0118280 3300049589 Bacteria 1836
276 Ga0501074_0153416 3300049590 Bacteria 1646
277 Ga0501243_008656 3300049675 Bacteria 1572
278 Ga0501080_0081177 3300049742 Bacteria 3013
279 Ga0501279_022168 3300049775 Bacteria 910
280 Ga0501035_0023284 3300049822 Bacteria 5680
281 Ga0501035_0038368 3300049822 Bacteria 4337
282 Ga0501035_0084646 3300049822 Bacteria 2796
283 Ga0501035_0166561 3300049822 Bacteria 1905
284 Ga0501044_0019051 3300049823 Bacteria 7347
285 Ga0501044_0051215 3300049823 Bacteria 4257
286 Ga0501044_0083619 3300049823 Bacteria 3227
287 Ga0501044_0368859 3300049823 Bacteria 1352
288 Ga0501045_0104466 3300049824 Bacteria 2099
289 nmdc:mga00v17_243377_c1 3300050491 Bacteria 1166
290 nmdc:mga00v17_343579_c1 3300050491 Bacteria 970
291 nmdc:mga00v17_58722_c1 3300050491 Bacteria 2358
292 Ga0500635_0033187 3300053080 Bacteria 1682
293 2895443167 2895442618 Bacteria 11027144
294 2555231044 2554235227 Bacteria 3637389
295 2643734932 2643221542 Bacteria 3563959
296 2643876141 2643221572 Bacteria 3614809
297 2644173092 2643221630 Bacteria 3601215
298 2644383196 2643221669 Bacteria 3611286
299 2644679308 2643221724 Bacteria 3593515
300 2655032238 2654587600 Bacteria 3911798
301 2691515676 2690315906 Bacteria 4517044
302 2730228827 2728369380 Bacteria 3620317
303 2774378684 2773857758 Bacteria 3592392
304 2775657412 2775506735 Bacteria 4556596
305 2808850068 2808606360 Bacteria 4404006
306 2808893075 2808606370 Bacteria 4942454
307 2809228555 2808606447 Bacteria 3572005
308 2812319456 2811994871 Bacteria 4497550
309 2852634069 2852632344 Bacteria 3463163
310 2852665759 2852663356 Bacteria 4090475
311 2884699630 2884693830 Bacteria 11273186
312 2895662025 2895660088 Bacteria 3782833
313 2904498988 2904497146 Bacteria 4731781
314 2904510182 2904509784 Bacteria 3520416
315 2905929777 2905926851 Bacteria 4423176
316 2908678604 2908678064 Bacteria 3482747
317 2910813100 2910809715 Bacteria 4982797
318 2919070955 2919069694 Bacteria 3622919
319 2919392063 2919391150 Bacteria 4884741
320 2919399485 2919395869 Bacteria 3704152
321 2919541452 2919538618 Bacteria 4677069
322 2933422305 2933418574 Bacteria 4476724
323 2939602265 2939598168 Bacteria 4687164
324 2939663244 2939660829 Bacteria 3784848
325 2939678621 2939674588 Bacteria 4844420
326 2945917206 2945916053 Bacteria 4555517
327 2945922532 2945920336 Bacteria 4501603
328 2945941295 2945941187 Bacteria 4682474
329 2945956682 2945956166 Bacteria 5110334
330 2945958437 2945956166 Bacteria 5110334
331 2946006208 2946003308 Bacteria 3857229
332 2946037178 2946037020 Bacteria 4900426
333 2946043295 2946041624 Bacteria 4191385
334 2946061011 2946059875 Bacteria 4386623
335 2946081726 2946080515 Bacteria 4310960
336 2953998431 2953998280 Bacteria 4812144
337 2974305158 2974302888 Bacteria 4369871
338 2974325579 2974324384 Bacteria 3750535
339 2977230501 2977228692 Bacteria 3450105
340 2977239303 2977236895 Bacteria 3569373
341 2977265750 2977264416 Bacteria 3750737
342 2984542914 2984542743 Bacteria 3569378
343 8004183650 8004182704 Bacteria 3391155
344 8045832931 8045830549 Bacteria 4444727
345 8054108805 8054107350 Bacteria 5022511
346 LJQas_1008119
347 JGI24740J21852_10004993
348 JGI24739J22299_10110918
349 JGI25152J39213_1000286
350 rootH1_10117057
351 Ga0055540_1032619
352 Ga0070670_100282867
353 Ga0070666_10098190
354 Ga0070669_100040488
355 Ga0070673_100045724
356 Ga0070678_100184959
357 Ga0070678_100394023
358 Ga0068853_100380890
359 Ga0070672_100257089
360 Ga0070702_100456522
361 Ga0068852_100000260
362 Ga0068863_100075866
363 Ga0075432_10026862
364 Ga0075370_10190912
365 Ga0105244_10018690
366 Ga0105244_10029525
367 Ga0105244_10176005
368 Ga0105243_10189450
369 Ga0105243_10311936
370 Ga0105248_10000365
371 Ga0105248_10909955
372 Ga0105237_10008852
373 Ga0105239_10001219
374 Ga0105246_10294297
375 Ga0157371_10443019
376 Ga0157369_10000931
377 Ga0171462_1001
378 Ga0157374_10216213
379 Ga0163162_10117711
380 Ga0157375_10650286
381 Ga0157375_10661672
382 Ga0209148_1004994
383 Ga0209051_1003000
384 Ga0207697_10008844
385 Ga0207655_1043942
386 Ga0207655_1074143
387 Ga0207713_1040759
388 Ga0207682_10011453
389 Ga0207688_10298254
390 Ga0207680_10251372
391 Ga0207671_10008386
392 Ga0207649_10086046
393 Ga0207681_10398232
394 Ga0207644_10074024
395 Ga0207691_10027674
396 Ga0207691_10197065
397 Ga0207711_10000340
398 Ga0207651_10080313
399 Ga0207668_10209951
400 Ga0207641_10293037
401 Ga0207683_10109416
402 Ga0207698_10000295
403 Ga0207428_10079514
404 Ga0307515_10074055
405 Ga0316181_1201650
406 Ga0307408_100034254
407 Ga0307408_100042070
408 Ga0307408_100112692
409 Ga0307408_100142042
410 Ga0307408_100396167
411 Ga0307408_100430000
412 Ga0307405_10011116
413 Ga0307405_10016412
414 Ga0307405_10032079
415 Ga0307405_10344929
416 Ga0307405_10379035
417 Ga0307405_10386529
418 Ga0307405_10472244
419 Ga0307405_10572516
420 Ga0307413_10010309
421 Ga0307413_10021998
422 Ga0307413_10117263
423 Ga0307410_10005301
424 Ga0307410_10081478
425 Ga0307410_10203960
426 Ga0307410_10290783
427 Ga0307406_10079998
428 Ga0307406_10272115
429 Ga0307406_10306738
430 Ga0307407_10020607
431 Ga0307407_10033909
432 Ga0307407_10099279
433 Ga0307407_10240922
434 Ga0307407_10294346
435 Ga0307412_10003396
436 Ga0307412_10026719
437 Ga0307412_10041939
438 Ga0307412_10078575
439 Ga0307412_10127628
440 Ga0307412_10148180
441 Ga0307412_10202161
442 Ga0307412_10226335
443 Ga0307412_10329950
444 Ga0307412_10551149
445 Ga0307409_100017608
446 Ga0307409_100093383
447 Ga0307409_100097300
448 Ga0307409_100222256
449 Ga0307409_100415243
450 Ga0307416_100012186
451 Ga0307416_100368226
452 Ga0307416_100427179
453 Ga0307416_100666549
454 Ga0307416_100969697
455 Ga0307416_101028268
456 Ga0307414_10178690
457 Ga0307414_10372372
458 Ga0307411_10684644
459 Ga0307415_100039358
460 Ga0307415_100111455
461 Ga0307415_100554514
462 Ga0395900_0109557
463 Ga0395900_0139586
464 Ga0395900_0835396
465 Ga0395898_0091895
466 Ga0395901_0110941
467 Ga0395901_0439555
468 Ga0395901_0965228
469 Ga0439436_0013753
470 Ga0439436_0041893
471 Ga0439436_0069638
472 Ga0439438_008878
473 Ga0439466_0049525
474 Ga0439433_0002354
475 Ga0439442_000059
476 Ga0439442_001417
477 Ga0439432_025506
478 Ga0439449_0000667
479 Ga0439449_0003065
480 Ga0439452_050895
481 Ga0439462_0030072
482 Ga0450920_000170
483 Ga0450920_000928
484 Ga0450907_000844
485 Ga0450908_017495
486 Ga0439434_0000664
487 Ga0439434_0009566
488 Ga0450918_000633
489 Ga0450918_009457
490 Ga0466968_0042877
491 Ga0466970_0035616
492 Ga0466957_0199220
493 Ga0466960_0087867
494 Ga0466960_0089555
495 Ga0466960_0100065
496 Ga0466959_0070462
497 Ga0466967_0237406
498 Ga0495627_000309
499 Ga0495582_0074617
500 Ga0495639_0016648
501 Ga0495664_0035241
502 Ga0495630_0712423
503 Ga0495631_0037368
504 Ga0495586_0000669
505 Ga0495586_0079937
506 Ga0495587_0006025
507 Ga0495645_0014983
508 Ga0495645_0022414
509 Ga0495645_0069824
510 Ga0495622_0108944
511 Ga0495667_0002436
512 Ga0495656_0045527
513 Ga0495588_0001018
514 Ga0495588_0017003
515 Ga0495588_0074691
516 Ga0495657_0025645
517 Ga0495613_0103101
518 Ga0495670_0003615
519 Ga0495670_0079103
520 Ga0495600_0097957
521 Ga0495581_0005743
522 Ga0495581_0024492
523 Ga0495581_0101144
524 Ga0495581_0301975
525 Ga0495636_0012373
526 Ga0495680_0411980
527 Ga0495675_0184838
528 Ga0495593_0013536
529 Ga0496100_0005326
530 Ga0496100_0355260
531 Ga0496100_0489619
532 Ga0496101_0009827
533 Ga0496101_0150558
534 Ga0496101_0271672
535 Ga0496102_0032197
536 Ga0496102_0061185
537 Ga0496102_0289868
538 Ga0496102_0418431
539 Ga0496102_0474186
540 Ga0496102_0510407
541 Ga0496103_0009772
542 Ga0496103_0095396
543 Ga0496104_0305428
544 Ga0496106_0001192
545 Ga0496106_0549621
546 Ga0496107_0014887
547 Ga0496108_0306123
548 Ga0496108_0506199
549 Ga0496109_0283794
550 Ga0496109_0523036
551 Ga0496110_0013358
552 Ga0496110_0103682
553 Ga0496110_0145110
554 Ga0496111_0028018
555 Ga0496114_0023547
556 Ga0496114_0073266
557 Ga0496114_0172078
558 Ga0496114_0221393
559 Ga0496114_0505877
560 Ga0496115_0055049
561 Ga0496115_0199988
562 Ga0496117_0000273
563 Ga0496117_0030795
564 Ga0496117_0043065
565 Ga0496118_0016333
566 Ga0496119_0002589
567 Ga0496122_0205817
568 Ga0496124_0088228
569 Ga0496125_0046003
570 Ga0496126_0097507
571 Ga0496126_0601147
572 Ga0501032_0009178
573 Ga0501032_0145935
574 Ga0501032_0155169
575 Ga0501033_0001569
576 Ga0501034_0000010
577 Ga0501034_0000070
578 Ga0501034_0002261
579 Ga0501034_0011492
580 Ga0501034_0036874
581 Ga0501034_0041712
582 Ga0501034_0115216
583 Ga0501034_0301945
584 Ga0501036_0046290
585 Ga0501037_0020373
586 Ga0501037_0026457
587 Ga0501037_0037852
588 Ga0501037_0043754
589 Ga0501037_0114353
590 Ga0501038_0063579
591 Ga0501038_0094057
592 Ga0501038_0103016
593 Ga0501038_0212560
594 Ga0501038_0212561
595 Ga0501039_0044973
596 Ga0501039_0139622
597 Ga0501039_0205963
598 Ga0501042_0127541
599 Ga0501043_0011553
600 Ga0501043_0067094
601 Ga0501043_0076814
602 Ga0501043_0152314
603 Ga0501043_0154171
604 Ga0501043_0260923
605 Ga0501046_0030513
606 Ga0501046_0054269
607 Ga0501047_0011870
608 Ga0501047_0028065
609 Ga0501047_0042178
610 Ga0501047_0050940
611 Ga0501048_0329684
612 Ga0501069_0085158
613 Ga0501069_0186757
614 Ga0501070_0009479
615 Ga0501070_0104611
616 Ga0501070_0135590
617 Ga0501070_0151019
618 Ga0501071_0000215
619 Ga0501073_0061325
620 Ga0501073_0118280
621 Ga0501074_0153416
622 Ga0501243_008656
623 Ga0501080_0081177
624 Ga0501279_022168
625 Ga0501035_0023284
626 Ga0501035_0038368
627 Ga0501035_0084646
628 Ga0501035_0166561
629 Ga0501044_0019051
630 Ga0501044_0051215
631 Ga0501044_0083619
632 Ga0501044_0368859
633 Ga0501045_0104466
634 nmdc:mga00v17_243377_c1
635 nmdc:mga00v17_343579_c1
636 nmdc:mga00v17_58722_c1
637 Ga0500635_0033187
638 2895443167
639 2555231044
640 2643734932
641 2643876141
642 2644173092
643 2644383196
644 2644679308
645 2655032238
646 2691515676
647 2730228827
648 2774378684
649 2775657412
650 2808850068
651 2808893075
652 2809228555
653 2812319456
654 2852634069
655 2852665759
656 2884699630
657 2895662025
658 2904498988
659 2904510182
660 2905929777
661 2908678604
662 2910813100
663 2919070955
664 2919392063
665 2919399485
666 2919541452
667 2933422305
668 2939602265
669 2939663244
670 2939678621
671 2945917206
672 2945922532
673 2945941295
674 2945956682
675 2945958437
676 2946006208
677 2946037178
678 2946043295
679 2946061011
680 2946081726
681 2953998431
682 2974305158
683 2974325579
684 2977230501
685 2977239303
686 2977265750
687 2984542914
688 8004183650
689 8045832931
690 8054108805

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

3

65

0.96

PF07729

FCD

FCD domain

75

202

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5d4r-assembly1.cif.gz_A crystal structure of arar(dbd) in complex with operator ore1 0.9104 11 74
4egz-assembly1.cif.gz_B crystal structure of arar(dbd) in complex with operator orr3 0.9071 11 74
4h0e-assembly1.cif.gz_A crystal structure of mutant orr3 in complex with ntd of arar 0.9015 11 74
4r1h-assembly1.cif.gz_B gntr family transcriptional regulator from listeria monocytogenes 0.8974 12 74
7wjg-assembly1.cif.gz_A-2 streptococcus mutans busr transcriptional factor 0.8831 12 75
ID Description Score Start End Superfamily
af_P0ACM2_11_76_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9646 11 73 1.10.10.10
af_Q79G00_16_82_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9641 11 73 1.10.10.10
2hs5A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9592 10 74 1.10.10.10
af_P37338_7_64_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.954 15 70 1.10.10.10
3sxyB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9462 14 74 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0K2R1V1-F1-model_v4 deleted 0.945 48 207
AF-A0A522NX33-F1-model_v4 GntR family transcriptional regulator 0.9427 1 228 GO:0003677
GO:0003700
AF-A0A2N6PGI9-F1-model_v4 GntR family transcriptional regulator 0.9421 20 218 GO:0003677
GO:0003700
AF-A0A522NX33-F1-model_v4 GntR family transcriptional regulator 0.9387 1 228 GO:0003677
GO:0003700
AF-A0A420BQZ2-F1-model_v4 deleted 0.9372 10 228

Map