F416339

General Info

Members Datasets Scaffolds Average Seq Length
345 269 294 228

Family's Representative Sequence

Representative Sequence 3300009011|Ga0105251_10049266|Ga0105251_100492663
Length 265
Sequence LPLIHGRITPFKGCSLFSRLFERLAQGASTCRRFMIMERLFSMKTTFTLCSVALAASLLAGCATESSRSLEVPKVASYNTTYQGQRSPIAVGKFDNRSSYMNGIFSDGVDRLGNQSKTILITHLQQTGRFNVLDRANMDELKTEAGIKGKAQTLKGANYVITGDVTEFGRKEVGDHQLWGILGRGKSQVAYAKVNLNVVNVQTSEVVYSSQGAGEYELSNREIIGFGGTASYDSTLNGKVLDLAVREAVNNLVAGIESGAWRPAN

Samples

Sample ID Description Type Environment
1 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
2 2506520008 Serratia plymuthica AS12 Isolate Unclassified
3 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
4 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
5 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
6 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
7 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
8 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
9 2608642108 Pantoea agglomerans NFPP29 Isolate Rhizoplane
10 2643221544 Pelomonas sp. Root1444 Isolate Unclassified
11 2643221656 Pelomonas sp. Root405 Isolate Unclassified
12 2643221664 Massilia sp. Root418 Isolate Unclassified
13 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
14 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
15 2738541280 Massilia sp. GV090 Isolate Unclassified
16 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
17 2772190666 Serratia surfactantfaciens YD25 Isolate Unclassified
18 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
19 2806310673 Serratia quinivorans NCTC 13189 Isolate Rhizosphere
20 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
21 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
22 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
23 2846540461 Photorhabdus luminescens HIM3 Isolate Rhizosphere
24 2847085930 Erwinia persicina B64 Isolate Bulb
25 2852103415 Edaphovirga cremea DSM 105170 Isolate Rhizosphere
26 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
27 2857558681 Duganella sp. R-74565 Isolate Unclassified
28 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
29 2865014394 Pantoea sp. R-71966 Isolate Unclassified
30 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
31 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
32 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
33 2876601092 Pantoea endophytica 596 Isolate Unclassified
34 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
35 2888366609 Serratia sp. NGAS9 Isolate Rhizosphere
36 2888373701 Serratia rhizosphaerae KUDC3025 Isolate Rhizosphere
37 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
38 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
39 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
40 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
41 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
42 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
43 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
44 2937967321 Serratia sp. YC16 Isolate Unclassified
45 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
46 2945951305 Pantoea agglomerans W2I1 Isolate Rhizosphere
47 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
48 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
49 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
50 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
51 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
52 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
53 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
54 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
55 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
56 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
57 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
58 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
59 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
60 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
61 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
62 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
63 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
64 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
65 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
66 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
67 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
68 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
69 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
70 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
71 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
72 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
73 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
74 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
75 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
76 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
77 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
78 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
79 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
80 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
81 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
82 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
83 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
84 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
85 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
86 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
87 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
88 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
89 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
90 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
91 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
92 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
93 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
94 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
95 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
96 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
97 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
98 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
103 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
105 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
106 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
107 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
108 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
111 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
113 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
124 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
125 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
127 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
128 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
129 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
130 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
131 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
132 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
133 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
134 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
135 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
136 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
137 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
138 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
139 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
140 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
141 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
142 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
143 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
144 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
145 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
146 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
147 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
148 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
149 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
150 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
151 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
152 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
153 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
154 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
155 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
156 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
157 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
158 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
159 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
160 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
161 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
162 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
163 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
164 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
165 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
166 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
167 3300044666 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1E Metagenome Unclassified
168 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
169 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
170 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
171 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
172 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
173 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
174 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
175 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
176 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
177 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
178 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
179 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
180 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
181 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
182 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
183 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
184 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
185 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
186 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
187 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
188 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
189 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
190 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
191 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
192 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
193 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
194 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
195 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
196 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
197 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
198 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
199 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
200 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
201 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
202 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
203 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
204 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
205 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
206 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
207 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
208 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
209 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
210 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
211 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
212 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
213 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
214 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
215 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
216 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
217 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
218 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
219 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
220 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
222 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
223 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
224 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
225 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
226 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
227 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
228 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
229 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
230 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
231 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
232 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
233 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
234 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
235 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
236 3300049657 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought Metagenome Rhizosphere
237 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
238 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
239 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
240 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
241 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
242 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
243 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
244 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
245 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
246 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
247 3300049757 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_B_2_control Metagenome Rhizosphere
248 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
249 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
250 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
251 3300049771 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_B_4_control Metagenome Rhizosphere
252 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
253 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
254 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
255 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
256 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
257 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
258 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
259 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
260 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
261 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
262 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
263 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
264 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
265 640753048 Serratia proteamaculans 568 Isolate Endosphere
266 8004592986 Serratia sp. S119 Isolate Unclassified
267 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
268 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere
269 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.64
Metatranscriptomes 0.29
Isolates 15.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0.29
Endosphere 12.17
Nodule 1.45
Rhizoplane 2.61
Rhizosphere 60.58
Stem 0
Stem Tuber 1.45
Unclassified 21.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1004902 3300002737 Bacteria 2866
2 JGI25154J39366_1002228 3300002738 Bacteria 5322
3 JGI25150J39212_1000291 3300002774 Bacteria 25799
4 JGI25151J46595_10000100 3300003187 Bacteria 116522
5 JGI25153J46596_10000071 3300003215 Bacteria 116950
6 rootH1_10006004 3300003316 Bacteria 6053
7 rootH1_10006004 3300003323 Bacteria 3031
8 rootH2_10032232 3300003320 Bacteria 6960
9 rootH2_10043985 3300003320 Bacteria 14718
10 rootL2_10000464 3300003322 Bacteria 48939
11 rootL2_10009892 3300003322 Bacteria 15568
12 rootH1_10010414 3300003323 Bacteria 8344
13 Ga0055539_1000066 3300003752 Bacteria 136557
14 Ga0055533_1000076 3300003756 Bacteria 136557
15 Ga0055525_1000098 3300003759 Bacteria 136557
16 Ga0055524_1000516 3300003775 Bacteria 29808
17 Ga0055524_1019308 3300003775 Bacteria 2334
18 Ga0055531_10000958 3300003794 Bacteria 23160
19 Ga0055541_1000401 3300003841 Bacteria 12996
20 Ga0058692_1000212 3300003856 Bacteria 34598
21 Ga0065165_1000356 3300005262 Bacteria 75078
22 Ga0065703_1018803 3300005272 Bacteria 7431
23 Ga0070682_100060174 3300005337 Bacteria 2402
24 Ga0070668_100038174 3300005347 Bacteria 3670
25 Ga0068854_100021171 3300005578 Bacteria 4410
26 Ga0068856_100088609 3300005614 Bacteria 3077
27 Ga0068861_100196538 3300005719 Bacteria 1690
28 Ga0075364_10429975 3300006051 Bacteria 902
29 Ga0075370_10004265 3300006353 Bacteria 6922
30 Ga0075370_10038281 3300006353 Bacteria 2698
31 Ga0075428_100351710 3300006844 Bacteria 1581
32 Ga0099823_1002128 3300006944 Bacteria 17581
33 Ga0079104_1000448 3300006946 Bacteria 46655
34 Ga0105251_10000058 3300009011 Bacteria 103857
35 Ga0105251_10002869 3300009011 Bacteria 13003
36 Ga0105251_10003055 3300009011 Bacteria 12453
37 Ga0105251_10027001 3300009011 Bacteria 2916
38 Ga0105251_10049266 3300009011 Bacteria 2017
39 Ga0105244_10004445 3300009036 Bacteria 9633
40 Ga0105250_10007197 3300009092 Bacteria 4794
41 Ga0105250_10015968 3300009092 Bacteria 3067
42 Ga0105250_10037041 3300009092 Bacteria 1957
43 Ga0105240_10038873 3300009093 Bacteria 6100
44 Ga0105240_10195811 3300009093 Bacteria 2373
45 Ga0105241_10000004 3300009174 Bacteria 803007
46 Ga0105248_10813193 3300009177 Bacteria 1055
47 Ga0105238_10000632 3300009551 Bacteria 37034
48 Ga0099796_10036651 3300010159 Bacteria 1634
49 Ga0105239_10050532 3300010375 Bacteria 4559
50 Ga0105246_10013344 3300011119 Bacteria 5150
51 Ga0157373_10000355 3300013100 Bacteria 36856
52 Ga0157373_10004261 3300013100 Bacteria 10772
53 Ga0157371_10000391 3300013102 Bacteria 55062
54 Ga0157371_10000580 3300013102 Bacteria 43291
55 Ga0157370_10124286 3300013104 Bacteria 2409
56 Ga0157369_10016939 3300013105 Bacteria 8191
57 Ga0157378_10948671 3300013297 Bacteria 893
58 Ga0163162_10092914 3300013306 Bacteria 3101
59 Ga0157372_10124930 3300013307 Bacteria 2958
60 Ga0157372_10271936 3300013307 Bacteria 1969
61 Ga0182008_10003642 3300014497 Bacteria 9198
62 Ga0182006_1009191 3300015261 Bacteria 4440
63 Ga0183361_10018 3300016635 Bacteria 133279
64 Ga0183361_10790 3300016635 Bacteria 1491
65 Ga0163161_10000001 3300017792 Bacteria 2041488
66 Ga0163161_10022122 3300017792 Bacteria 4476
67 Ga0213872_10002307 3300021361 Bacteria 11376
68 Ga0209784_100002 3300025224 Bacteria 1753105
69 Ga0209566_100003 3300025225 Bacteria 1753105
70 Ga0209674_100004 3300025226 Bacteria 1753105
71 Ga0209563_100006 3300025230 Bacteria 1753105
72 Ga0209437_100199 3300025233 Bacteria 120313
73 Ga0209258_102519 3300025242 Bacteria 4642
74 Ga0207425_1000030 3300025245 Bacteria 268200
75 Ga0209646_1000114 3300025246 Bacteria 152958
76 Ga0209677_100003 3300025253 Bacteria 1753105
77 Ga0209129_1000063 3300025258 Bacteria 240205
78 Ga0209673_1019401 3300025273 Bacteria 2442
79 Ga0209025_1000013 3300025294 Bacteria 871757
80 Ga0209758_1000014 3300025297 Bacteria 871757
81 Ga0209050_1005463 3300025298 Bacteria 7969
82 Ga0209256_1000391 3300025299 Bacteria 69634
83 Ga0209256_1001174 3300025299 Bacteria 29515
84 Ga0209051_1007647 3300025303 Bacteria 5875
85 Ga0209257_1001286 3300025304 Bacteria 30635
86 Ga0207696_1000254 3300025711 Bacteria 69759
87 Ga0207696_1002664 3300025711 Bacteria 8580
88 Ga0207655_1003806 3300025728 Bacteria 11012
89 Ga0207655_1004093 3300025728 Bacteria 10493
90 Ga0207655_1004219 3300025728 Bacteria 10299
91 Ga0207713_1000001 3300025735 Bacteria 2295391
92 Ga0207713_1000023 3300025735 Bacteria 346097
93 Ga0207713_1000026 3300025735 Bacteria 319032
94 Ga0207713_1031109 3300025735 Bacteria 2365
95 Ga0207654_10000006 3300025911 Bacteria 815027
96 Ga0207695_10001105 3300025913 Bacteria 46872
97 Ga0207695_10121233 3300025913 Bacteria 2582
98 Ga0207694_10000171 3300025924 Bacteria 66876
99 Ga0207668_10016014 3300025972 Bacteria 4670
100 Ga0207702_10065892 3300026078 Bacteria 3103
101 Ga0209281_1000008 3300027111 Bacteria 867470
102 Ga0209281_1015723 3300027111 Bacteria 1570
103 Ga0209389_1010920 3300027296 Bacteria 8210
104 Ga0209371_1001848 3300027312 Bacteria 13030
105 Ga0307515_10094038 3300028794 Bacteria 3708
106 Ga0268256_1005206 3300030500 Bacteria 5160
107 Ga0265331_10102374 3300031250 Bacteria 1317
108 Ga0265327_10003390 3300031251 Bacteria 15309
109 Ga0307513_10115415 3300031456 Bacteria 2667
110 Ga0307408_100028267 3300031548 Bacteria 3874
111 Ga0307411_10628658 3300032005 Bacteria 927
112 Ga0373950_0006918 3300034818 Bacteria 1746
113 Ga0373928_0001504 3300035084 Bacteria 4538
114 Ga0373940_0008026 3300035088 Bacteria 2407
115 Ga0373944_0000465 3300035089 Bacteria 9428
116 Ga0373932_0000002 3300035112 Bacteria 711821
117 Ga0373939_0063061 3300035114 Bacteria 1186
118 Ga0373942_0051452 3300035207 Bacteria 1156
119 Ga0373962_0000174 3300035242 Bacteria 13667
120 Ga0373931_0000012 3300035691 Bacteria 267735
121 Ga0373935_0112252 3300035692 Bacteria 1810
122 Ga0373947_0052100 3300035725 Bacteria 2465
123 Ga0373925_0001227 3300037068 Bacteria 22683
124 Ga0400484_35554 3300038725 Bacteria 5065
125 Ga0400485_18199 3300038735 Unclassified 3044
126 Ga0400486_09731 3300038742 Bacteria 12732
127 Ga0400483_020146 3300039062 Bacteria 8483
128 Ga0400483_077637 3300039062 Bacteria 1446
129 Ga0400483_128784 3300039062 Bacteria 12295
130 Ga0400483_177015 3300039062 Bacteria 39327
131 Ga0400483_216195 3300039062 Bacteria 6230
132 Ga0400483_234887 3300039062 Bacteria 2112
133 Ga0400487_45397 3300039110 Unclassified 1174
134 Ga0400487_57645 3300039110 Bacteria 7509
135 Ga0436361_0309661 3300039447 Bacteria 8497
136 Ga0439438_002541 3300041405 Bacteria 7740
137 Ga0439438_009073 3300041405 Bacteria 3242
138 Ga0439447_003080 3300041407 Bacteria 5953
139 Ga0439466_0000012 3300041411 Bacteria 179902
140 Ga0451798_0416698 3300041458 Bacteria 742
141 Ga0439463_002358 3300042016 Bacteria 4812
142 Ga0450917_001020 3300042120 Bacteria 2065
143 Ga0450888_000018 3300042126 Bacteria 11493
144 Ga0450890_001109 3300042127 Bacteria 3905
145 Ga0450890_005699 3300042127 Bacteria 1600
146 Ga0450891_001441 3300042129 Bacteria 2461
147 Ga0450889_000240 3300042144 Bacteria 6043
148 Ga0450907_000186 3300042146 Bacteria 22650
149 Ga0439459_0000747 3300042438 Bacteria 4462
150 Ga0439459_0037123 3300042438 Bacteria 1019
151 Ga0439464_0033849 3300042439 Bacteria 1439
152 Ga0450916_012251 3300042530 Bacteria 1092
153 Ga0450893_0000578 3300042532 Bacteria 5232
154 Ga0451577_0001441 3300042876 Bacteria 31674
155 Ga0466977_0000924 3300044666 Bacteria 11133
156 Ga0466961_0055553 3300044693 Bacteria 2524
157 Ga0466963_0041609 3300044694 Bacteria 3014
158 Ga0466963_0164465 3300044694 Bacteria 1545
159 Ga0453684_0387620 3300044712 Bacteria 1568
160 Ga0466970_0077574 3300044765 Bacteria 1791
161 Ga0451576_0150962 3300045051 Bacteria 2423
162 Ga0495617_007063 3300046452 Bacteria 3916
163 Ga0495591_000028 3300046458 Bacteria 182419
164 Ga0495591_035467 3300046458 Bacteria 1460
165 Ga0495638_0000105 3300046460 Bacteria 134384
166 Ga0495650_0001156 3300046471 Bacteria 28385
167 Ga0495650_0007743 3300046471 Bacteria 6396
168 Ga0495639_0000560 3300046475 Bacteria 17338
169 Ga0495596_0009103 3300046500 Bacteria 4386
170 Ga0495607_0123217 3300046501 Bacteria 1358
171 Ga0495583_0000740 3300046506 Bacteria 41499
172 Ga0495606_0057466 3300046507 Bacteria 2505
173 Ga0495643_0017324 3300046522 Bacteria 4213
174 Ga0495643_0159676 3300046522 Bacteria 1110
175 Ga0495648_0000008 3300046524 Bacteria 336584
176 Ga0495642_0000948 3300046528 Bacteria 13579
177 Ga0495654_0000032 3300046530 Bacteria 205780
178 Ga0495609_0032331 3300046538 Bacteria 2377
179 Ga0495597_0004326 3300046542 Bacteria 7840
180 Ga0495622_0000280 3300046557 Bacteria 38774
181 Ga0495633_0000238 3300046558 Bacteria 66595
182 Ga0495625_0000954 3300046660 Bacteria 38641
183 Ga0495670_0075208 3300046691 Bacteria 1714
184 Ga0495589_0000002 3300046794 Bacteria 758846
185 Ga0495660_0014782 3300046810 Bacteria 4514
186 Ga0495672_0001166 3300047320 Bacteria 26602
187 Ga0495687_000412 3300047443 Bacteria 52902
188 Ga0495677_0027209 3300047445 Bacteria 2075
189 Ga0495679_017662 3300047446 Bacteria 2549
190 Ga0495679_038088 3300047446 Bacteria 1508
191 Ga0496101_0001513 3300048904 Bacteria 13912
192 Ga0496102_0022912 3300048905 Bacteria 5539
193 Ga0496102_0201425 3300048905 Bacteria 1876
194 Ga0496104_0011271 3300048907 Bacteria 8003
195 Ga0496104_0157054 3300048907 Bacteria 2183
196 Ga0496105_0022664 3300048908 Bacteria 5088
197 Ga0496116_0022806 3300048919 Bacteria 4678
198 Ga0496116_0062772 3300048919 Bacteria 2397
199 Ga0496116_0129338 3300048919 Bacteria 1443
200 Ga0496117_0000199 3300048920 Bacteria 118320
201 Ga0496117_0000241 3300048920 Bacteria 103487
202 Ga0496118_0000381 3300048921 Bacteria 74577
203 Ga0496118_0001337 3300048921 Bacteria 37414
204 Ga0496118_0002672 3300048921 Bacteria 23572
205 Ga0496119_0000078 3300048922 Bacteria 140556
206 Ga0496119_0000110 3300048922 Bacteria 115586
207 Ga0496119_0000633 3300048922 Bacteria 47457
208 Ga0496119_0001515 3300048922 Bacteria 27758
209 Ga0496119_0049843 3300048922 Bacteria 2585
210 Ga0496119_0055554 3300048922 Bacteria 2404
211 Ga0496119_0113985 3300048922 Bacteria 1496
212 Ga0496119_0241315 3300048922 Bacteria 915
213 Ga0496120_0000009 3300048923 Bacteria 386727
214 Ga0496120_0000151 3300048923 Bacteria 115582
215 Ga0496120_0000265 3300048923 Bacteria 87441
216 Ga0496120_0000797 3300048923 Bacteria 45375
217 Ga0496120_0001770 3300048923 Bacteria 24332
218 Ga0496120_0042636 3300048923 Bacteria 2648
219 Ga0496120_0075595 3300048923 Bacteria 1838
220 Ga0496121_0000131 3300048924 Bacteria 167955
221 Ga0496122_0001968 3300048925 Bacteria 30698
222 Ga0496122_0006388 3300048925 Bacteria 13547
223 Ga0496122_0078549 3300048925 Bacteria 2311
224 Ga0496122_0083658 3300048925 Bacteria 2211
225 Ga0496123_0003779 3300048926 Bacteria 16578
226 Ga0496123_0009696 3300048926 Bacteria 8633
227 Ga0496123_0038683 3300048926 Bacteria 3348
228 Ga0496124_0015297 3300048927 Bacteria 7363
229 Ga0496124_0099416 3300048927 Bacteria 2359
230 Ga0496125_0087894 3300048928 Bacteria 2345
231 Ga0496126_0025759 3300048929 Bacteria 5652
232 Ga0495678_004642 3300049459 Bacteria 7881
233 Ga0495678_090085 3300049459 Bacteria 1082
234 Ga0501290_004551 3300049513 Bacteria 1727
235 Ga0501294_014284 3300049517 Bacteria 811
236 Ga0501300_002570 3300049523 Bacteria 2718
237 Ga0501314_003807 3300049530 Bacteria 1229
238 Ga0501032_0027805 3300049569 Unclassified 3886
239 Ga0501036_0300651 3300049572 Unclassified 1342
240 Ga0501040_0162968 3300049576 Bacteria 1577
241 Ga0501041_0327749 3300049577 Bacteria 966
242 Ga0501046_0018119 3300049580 Bacteria 5863
243 Ga0501046_0073966 3300049580 Bacteria 2643
244 Ga0501048_0058703 3300049582 Bacteria 2727
245 Ga0501048_0074958 3300049582 Bacteria 2387
246 Ga0501067_0132454 3300049583 Bacteria 1388
247 Ga0501068_0143864 3300049584 Bacteria 1496
248 Ga0501071_0141784 3300049587 Bacteria 1790
249 Ga0501072_0054579 3300049588 Bacteria 3148
250 Ga0501072_0110208 3300049588 Bacteria 2191
251 Ga0501073_0172833 3300049589 Bacteria 1496
252 Ga0501075_0133757 3300049591 Bacteria 1889
253 Ga0501075_0420471 3300049591 Bacteria 1019
254 Ga0501076_0207012 3300049592 Bacteria 1602
255 Ga0501076_0223263 3300049592 Bacteria 1540
256 Ga0501199_005231 3300049650 Bacteria 1301
257 Ga0501201_001334 3300049651 Bacteria 2317
258 Ga0501202_003039 3300049652 Bacteria 2853
259 Ga0501206_010396 3300049653 Bacteria 1246
260 Ga0501207_001659 3300049654 Bacteria 2802
261 Ga0501210_000543 3300049657 Bacteria 1829
262 Ga0501222_000897 3300049662 Bacteria 4277
263 Ga0501233_002158 3300049668 Bacteria 3442
264 Ga0501235_001831 3300049669 Bacteria 4557
265 Ga0501235_048678 3300049669 Bacteria 979
266 Ga0501242_002290 3300049674 Bacteria 2002
267 Ga0501249_008055 3300049679 Bacteria 2187
268 Ga0501253_001095 3300049683 Bacteria 2639
269 Ga0501259_020485 3300049688 Bacteria 1174
270 Ga0501221_001565 3300049704 Bacteria 3796
271 Ga0501081_0170939 3300049743 Bacteria 1569
272 Ga0501083_0054881 3300049744 Bacteria 2673
273 Ga0501083_0077244 3300049744 Bacteria 2210
274 Ga0501232_000489 3300049757 Bacteria 2670
275 Ga0501264_001982 3300049761 Bacteria 1977
276 Ga0501267_000344 3300049764 Bacteria 3464
277 Ga0501272_002002 3300049769 Bacteria 2001
278 Ga0501274_000189 3300049771 Bacteria 3892
279 Ga0501276_003171 3300049773 Bacteria 1186
280 Ga0501283_004200 3300049779 Bacteria 1939
281 Ga0501035_0014361 3300049822 Bacteria 7311
282 Ga0501044_0000834 3300049823 Bacteria 36994
283 nmdc:mga03683_188255_c1 3300050489 Bacteria 943
284 nmdc:mga00v17_135643_c1 3300050491 Bacteria 1575
285 nmdc:mga00v17_174210_c1 3300050491 Bacteria 1388
286 nmdc:mga00v17_25318_c1 3300050491 Bacteria 3448
287 nmdc:mga0k408_73935_c1 3300050493 Bacteria 1991
288 nmdc:mga07m45_14950_c1 3300050496 Bacteria 3842
289 nmdc:mga07m45_18554_c1 3300050496 Bacteria 3758
290 nmdc:mga06r32_159680_c1 3300050510 Bacteria 2236
291 Ga0500650_0000090 3300053098 Bacteria 26164
292 Ga0500622_0013175 3300053156 Bacteria 4464
293 Ga0501084_0025839 3300054114 Bacteria 4897
294 Ga0530510_0006783 3300061734 Bacteria 7979

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044666 Ga0466977_0000924 Ga0466977_0000924_10173_10895 190
2 3300044693 Ga0466961_0055553 Ga0466961_0055553_806_1519 193
3 3300005614 Ga0068856_100088609 Ga0068856_1000886093 213
4 3300013104 Ga0157370_10124286 Ga0157370_101242861 213
5 3300026078 Ga0207702_10065892 Ga0207702_100658923 213
6 3300044712 Ga0453684_0387620 Ga0453684_0387620_25_669 214
7 3300049582 Ga0501048_0058703 Ga0501048_0058703_1141_1800 214
8 3300049587 Ga0501071_0141784 Ga0501071_0141784_691_1350 214
9 3300049588 Ga0501072_0110208 Ga0501072_0110208_737_1396 214
10 3300049591 Ga0501075_0133757 Ga0501075_0133757_616_1275 214
11 3300049744 Ga0501083_0077244 Ga0501083_0077244_367_1026 214
12 3300061734 Ga0530510_0006783 Ga0530510_0006783_5074_5733 214
13 3300016635 Ga0183361_10018 Ga0183361_1001830 217
14 iso_pu_bacteria 2928515477 2928518559 217
15 iso_pu_bacteria 2521172590 2521559313 218
16 iso_pu_bacteria 2818991449 2819615830 218
17 iso_pu_bacteria 2904439833 2904443722 218
18 iso_pu_bacteria 2506520007 2506577424 219
19 iso_pu_bacteria 2506520008 2506582562 219
20 iso_pu_bacteria 2537561728 2538428579 219
21 iso_pu_bacteria 2554235234 2555259745 219
22 iso_pu_bacteria 2585427591 2585829776 219
23 iso_pu_bacteria 2585427592 2585833483 219
24 iso_pu_bacteria 2654587920 2656278340 219
25 iso_pu_bacteria 2687453601 2689443900 219
26 iso_pu_bacteria 2765235838 2765570572 219
27 iso_pu_bacteria 2806310673 2807180862 219
28 iso_pu_bacteria 2808606415 2809128697 219
29 iso_pu_bacteria 2808606419 2809148318 219
30 iso_pu_bacteria 2846540461 2846543921 219
31 iso_pu_bacteria 2852103415 2852105630 219
32 iso_pu_bacteria 2855195626 2855195700 219
33 iso_pu_bacteria 2858466076 2858470390 219
34 iso_pu_bacteria 2869551831 2869553281 219
35 iso_pu_bacteria 2871272651 2871274705 219
36 iso_pu_bacteria 2871282230 2871284357 219
37 iso_pu_bacteria 2888366609 2888367939 219
38 iso_pu_bacteria 2888373701 2888374414 219
39 iso_pu_bacteria 2900051742 2900054888 219
40 iso_pu_bacteria 2904479285 2904483500 219
41 iso_pu_bacteria 2919108558 2919110846 219
42 iso_pu_bacteria 2923525760 2923527213 219
43 iso_pu_bacteria 2971820967 2971822600 219
44 iso_pu_bacteria 640753048 640936922 219
45 3300003322 rootL2_10009892 rootL2_100098927 220
46 3300027111 Ga0209281_1015723 Ga0209281_10157231 220
47 iso_pu_bacteria 2643221544 2643742004 220
48 iso_pu_bacteria 2772190666 2772437938 220
49 iso_pu_bacteria 2847085930 2847088810 220
50 iso_pu_bacteria 2857558681 2857562443 220
51 iso_pu_bacteria 2881927736 2881931446 220
52 iso_pu_bacteria 2937967321 2937969679 220
53 iso_pu_bacteria 8004592986 8004594854 220
54 3300005337 Ga0070682_100060174 Ga0070682_1000601743 221
55 3300009177 Ga0105248_10813193 Ga0105248_108131931 221
56 3300013297 Ga0157378_10948671 Ga0157378_109486711 221
57 3300031456 Ga0307513_10115415 Ga0307513_101154153 221
58 iso_pu_bacteria 2511231025 2511380576 221
59 iso_pu_bacteria 2608642108 2608668459 221
60 iso_pu_bacteria 2643221656 2644315584 221
61 iso_pu_bacteria 2643221664 2644356991 221
62 iso_pu_bacteria 2738541280 2738741506 221
63 iso_pu_bacteria 2865014394 2865017681 221
64 iso_pu_bacteria 2876601092 2876601346 221
65 iso_pu_bacteria 2932422444 2932422974 221
66 iso_pu_bacteria 2939602548 2939603106 221
67 iso_pu_bacteria 2945951305 2945954043 221
68 iso_pu_bacteria 8016733728 8016736968 221
69 iso_pu_bacteria 8019499862 8019502175 221
70 3300003752 Ga0055539_1000066 Ga0055539_1000066121 222
71 3300003756 Ga0055533_1000076 Ga0055533_1000076121 222
72 3300003759 Ga0055525_1000098 Ga0055525_1000098121 222
73 3300003841 Ga0055541_1000401 Ga0055541_100040113 222
74 3300005272 Ga0065703_1018803 Ga0065703_10188034 222
75 3300005578 Ga0068854_100021171 Ga0068854_1000211713 222
76 3300006946 Ga0079104_1000448 Ga0079104_10004487 222
77 3300009011 Ga0105251_10000058 Ga0105251_1000005826 222
78 3300009011 Ga0105251_10002869 Ga0105251_1000286913 222
79 3300009011 Ga0105251_10049266 Ga0105251_100492663 222
80 3300009092 Ga0105250_10037041 Ga0105250_100370412 222
81 3300009093 Ga0105240_10038873 Ga0105240_100388734 222
82 3300009093 Ga0105240_10195811 Ga0105240_101958114 222
83 3300009174 Ga0105241_10000004 Ga0105241_10000004557 222
84 3300009551 Ga0105238_10000632 Ga0105238_1000063222 222
85 3300010375 Ga0105239_10050532 Ga0105239_100505322 222
86 3300013100 Ga0157373_10004261 Ga0157373_100042615 222
87 3300013102 Ga0157371_10000580 Ga0157371_1000058028 222
88 3300014497 Ga0182008_10003642 Ga0182008_1000364210 222
89 3300017792 Ga0163161_10000001 Ga0163161_10000001133 222
90 3300021361 Ga0213872_10002307 Ga0213872_100023071 222
91 3300025224 Ga0209784_100002 Ga0209784_1000021609 222
92 3300025225 Ga0209566_100003 Ga0209566_1000031609 222
93 3300025226 Ga0209674_100004 Ga0209674_1000041609 222
94 3300025230 Ga0209563_100006 Ga0209563_1000061609 222
95 3300025253 Ga0209677_100003 Ga0209677_1000031609 222
96 3300025735 Ga0207713_1000023 Ga0207713_1000023203 222
97 3300025735 Ga0207713_1000026 Ga0207713_1000026229 222
98 3300025911 Ga0207654_10000006 Ga0207654_10000006575 222
99 3300025913 Ga0207695_10001105 Ga0207695_100011054 222
100 3300025913 Ga0207695_10121233 Ga0207695_101212334 222
101 3300025924 Ga0207694_10000171 Ga0207694_1000017137 222
102 3300027111 Ga0209281_1000008 Ga0209281_1000008238 222
103 3300032005 Ga0307411_10628658 Ga0307411_106286582 222
104 3300039447 Ga0436361_0309661 Ga0436361_0309661_4138_4806 222
105 3300044765 Ga0466970_0077574 Ga0466970_0077574_987_1664 222
106 3300046471 Ga0495650_0001156 Ga0495650_0001156_10480_11157 222
107 3300046794 Ga0495589_0000002 Ga0495589_0000002_464027_464698 222
108 3300047446 Ga0495679_038088 Ga0495679_038088_422_1099 222
109 3300048907 Ga0496104_0011271 Ga0496104_0011271_7207_7884 222
110 3300048907 Ga0496104_0157054 Ga0496104_0157054_1440_2111 222
111 3300048908 Ga0496105_0022664 Ga0496105_0022664_3750_4427 222
112 3300048921 Ga0496118_0001337 Ga0496118_0001337_7946_8617 222
113 3300048922 Ga0496119_0000633 Ga0496119_0000633_19030_19707 222
114 3300048922 Ga0496119_0049843 Ga0496119_0049843_400_1071 222
115 3300048922 Ga0496119_0113985 Ga0496119_0113985_199_870 222
116 3300048923 Ga0496120_0000797 Ga0496120_0000797_19036_19713 222
117 3300048923 Ga0496120_0042636 Ga0496120_0042636_400_1071 222
118 3300048923 Ga0496120_0075595 Ga0496120_0075595_137_808 222
119 3300048925 Ga0496122_0078549 Ga0496122_0078549_730_1407 222
120 3300048927 Ga0496124_0099416 Ga0496124_0099416_1311_1982 222
121 3300048928 Ga0496125_0087894 Ga0496125_0087894_1283_1954 222
122 3300049669 Ga0501235_048678 Ga0501235_048678_94_765 222
123 3300053098 Ga0500650_0000090 Ga0500650_0000090_16527_17195 222
124 iso_pu_bacteria 2791355137 2792834968 222
125 3300002738 JGI25154J39366_1002228 JGI25154J39366_10022282 223
126 3300003316 rootH1_10006004 rootH1_100060043 223
127 3300003320 rootH2_10032232 rootH2_1003223210 223
128 3300003322 rootL2_10000464 rootL2_1000046440 223
129 3300003323 rootH1_10010414 rootH1_1001041412 223
130 3300003775 Ga0055524_1000516 Ga0055524_10005162 223
131 3300005262 Ga0065165_1000356 Ga0065165_10003565 223
132 3300006353 Ga0075370_10004265 Ga0075370_100042659 223
133 3300017792 Ga0163161_10022122 Ga0163161_100221225 223
134 3300025246 Ga0209646_1000114 Ga0209646_1000114141 223
135 3300025299 Ga0209256_1000391 Ga0209256_100039163 223
136 3300031250 Ga0265331_10102374 Ga0265331_101023742 223
137 3300031251 Ga0265327_10003390 Ga0265327_100033903 223
138 3300031548 Ga0307408_100028267 Ga0307408_1000282672 223
139 3300038725 Ga0400484_35554 Ga0400484_35554_3244_3915 223
140 3300039062 Ga0400483_216195 Ga0400483_216195_3513_4184 223
141 3300042127 Ga0450890_001109 Ga0450890_001109_2666_3349 223
142 3300042438 Ga0439459_0000747 Ga0439459_0000747_1814_2497 223
143 3300044694 Ga0466963_0041609 Ga0466963_0041609_563_1246 223
144 3300050496 nmdc:mga07m45_18554_c1 nmdc:mga07m45_18554_c1_327_1010 223
145 3300002774 JGI25150J39212_1000291 JGI25150J39212_100029119 224
146 3300003187 JGI25151J46595_10000100 JGI25151J46595_1000010062 224
147 3300003215 JGI25153J46596_10000071 JGI25153J46596_1000007162 224
148 3300003320 rootH2_10043985 rootH2_1004398511 224
149 3300003775 Ga0055524_1019308 Ga0055524_10193082 224
150 3300003794 Ga0055531_10000958 Ga0055531_100009582 224
151 3300005719 Ga0068861_100196538 Ga0068861_1001965382 224
152 3300006353 Ga0075370_10038281 Ga0075370_100382814 224
153 3300006844 Ga0075428_100351710 Ga0075428_1003517102 224
154 3300006944 Ga0099823_1002128 Ga0099823_100212817 224
155 3300010159 Ga0099796_10036651 Ga0099796_100366512 224
156 3300025242 Ga0209258_102519 Ga0209258_1025195 224
157 3300025245 Ga0207425_1000030 Ga0207425_1000030178 224
158 3300025258 Ga0209129_1000063 Ga0209129_100006344 224
159 3300025273 Ga0209673_1019401 Ga0209673_10194012 224
160 3300025294 Ga0209025_1000013 Ga0209025_1000013616 224
161 3300025297 Ga0209758_1000014 Ga0209758_1000014616 224
162 3300025298 Ga0209050_1005463 Ga0209050_10054636 224
163 3300025299 Ga0209256_1001174 Ga0209256_10011742 224
164 3300025303 Ga0209051_1007647 Ga0209051_10076475 224
165 3300025304 Ga0209257_1001286 Ga0209257_100128627 224
166 3300027296 Ga0209389_1010920 Ga0209389_10109206 224
167 3300028794 Ga0307515_10094038 Ga0307515_100940384 224
168 3300034818 Ga0373950_0006918 Ga0373950_0006918_548_1231 224
169 3300035084 Ga0373928_0001504 Ga0373928_0001504_2783_3466 224
170 3300035088 Ga0373940_0008026 Ga0373940_0008026_1319_2002 224
171 3300035089 Ga0373944_0000465 Ga0373944_0000465_6538_7221 224
172 3300035112 Ga0373932_0000002 Ga0373932_0000002_138798_139481 224
173 3300035114 Ga0373939_0063061 Ga0373939_0063061_450_1133 224
174 3300035207 Ga0373942_0051452 Ga0373942_0051452_150_833 224
175 3300035242 Ga0373962_0000174 Ga0373962_0000174_5852_6535 224
176 3300035691 Ga0373931_0000012 Ga0373931_0000012_138817_139500 224
177 3300035692 Ga0373935_0112252 Ga0373935_0112252_726_1409 224
178 3300035725 Ga0373947_0052100 Ga0373947_0052100_1451_2134 224
179 3300037068 Ga0373925_0001227 Ga0373925_0001227_19236_19919 224
180 3300038735 Ga0400485_18199 Ga0400485_18199_1955_2629 224
181 3300038742 Ga0400486_09731 Ga0400486_09731_325_999 224
182 3300039062 Ga0400483_020146 Ga0400483_020146_7546_8220 224
183 3300039062 Ga0400483_077637 Ga0400483_077637_328_1035 224
184 3300039062 Ga0400483_128784 Ga0400483_128784_15_722 224
185 3300039062 Ga0400483_177015 Ga0400483_177015_27250_27957 224
186 3300039062 Ga0400483_234887 Ga0400483_234887_352_1026 224
187 3300039110 Ga0400487_45397 Ga0400487_45397_323_997 224
188 3300039110 Ga0400487_57645 Ga0400487_57645_5698_6372 224
189 3300041458 Ga0451798_0416698 Ga0451798_0416698_45_728 224
190 3300042120 Ga0450917_001020 Ga0450917_001020_783_1469 224
191 3300042126 Ga0450888_000018 Ga0450888_000018_1723_2409 224
192 3300042127 Ga0450890_005699 Ga0450890_005699_516_1202 224
193 3300042129 Ga0450891_001441 Ga0450891_001441_1166_1852 224
194 3300042144 Ga0450889_000240 Ga0450889_000240_1756_2442 224
195 3300042438 Ga0439459_0037123 Ga0439459_0037123_312_998 224
196 3300042530 Ga0450916_012251 Ga0450916_012251_78_764 224
197 3300042532 Ga0450893_0000578 Ga0450893_0000578_4452_5138 224
198 3300042876 Ga0451577_0001441 Ga0451577_0001441_29892_30566 224
199 3300044694 Ga0466963_0164465 Ga0466963_0164465_425_1111 224
200 3300045051 Ga0451576_0150962 Ga0451576_0150962_112_786 224
201 3300046460 Ga0495638_0000105 Ga0495638_0000105_21360_22040 224
202 3300046471 Ga0495650_0007743 Ga0495650_0007743_3891_4571 224
203 3300046475 Ga0495639_0000560 Ga0495639_0000560_3879_4559 224
204 3300046501 Ga0495607_0123217 Ga0495607_0123217_342_1022 224
205 3300046506 Ga0495583_0000740 Ga0495583_0000740_19485_20165 224
206 3300046507 Ga0495606_0057466 Ga0495606_0057466_178_858 224
207 3300046524 Ga0495648_0000008 Ga0495648_0000008_253840_254520 224
208 3300046528 Ga0495642_0000948 Ga0495642_0000948_610_1290 224
209 3300046538 Ga0495609_0032331 Ga0495609_0032331_712_1392 224
210 3300046542 Ga0495597_0004326 Ga0495597_0004326_6035_6715 224
211 3300046557 Ga0495622_0000280 Ga0495622_0000280_21475_22155 224
212 3300046558 Ga0495633_0000238 Ga0495633_0000238_21475_22155 224
213 3300046660 Ga0495625_0000954 Ga0495625_0000954_16383_17063 224
214 3300047320 Ga0495672_0001166 Ga0495672_0001166_21858_22538 224
215 3300047443 Ga0495687_000412 Ga0495687_000412_347_1027 224
216 3300047445 Ga0495677_0027209 Ga0495677_0027209_361_1041 224
217 3300048919 Ga0496116_0129338 Ga0496116_0129338_434_1120 224
218 3300048922 Ga0496119_0000078 Ga0496119_0000078_47460_48134 224
219 3300048922 Ga0496119_0001515 Ga0496119_0001515_6065_6739 224
220 3300048923 Ga0496120_0000009 Ga0496120_0000009_92035_92709 224
221 3300048923 Ga0496120_0000265 Ga0496120_0000265_62913_63587 224
222 3300049459 Ga0495678_004642 Ga0495678_004642_4226_4906 224
223 3300049459 Ga0495678_090085 Ga0495678_090085_241_921 224
224 3300049513 Ga0501290_004551 Ga0501290_004551_60_734 224
225 3300049517 Ga0501294_014284 Ga0501294_014284_13_699 224
226 3300049523 Ga0501300_002570 Ga0501300_002570_1626_2312 224
227 3300049530 Ga0501314_003807 Ga0501314_003807_531_1217 224
228 3300049569 Ga0501032_0027805 Ga0501032_0027805_2008_2682 224
229 3300049572 Ga0501036_0300651 Ga0501036_0300651_51_725 224
230 3300049576 Ga0501040_0162968 Ga0501040_0162968_143_844 224
231 3300049577 Ga0501041_0327749 Ga0501041_0327749_252_953 224
232 3300049580 Ga0501046_0018119 Ga0501046_0018119_2106_2780 224
233 3300049580 Ga0501046_0073966 Ga0501046_0073966_963_1637 224
234 3300049582 Ga0501048_0074958 Ga0501048_0074958_711_1412 224
235 3300049583 Ga0501067_0132454 Ga0501067_0132454_209_910 224
236 3300049584 Ga0501068_0143864 Ga0501068_0143864_361_1062 224
237 3300049588 Ga0501072_0054579 Ga0501072_0054579_1265_1966 224
238 3300049589 Ga0501073_0172833 Ga0501073_0172833_679_1380 224
239 3300049591 Ga0501075_0420471 Ga0501075_0420471_302_997 224
240 3300049592 Ga0501076_0207012 Ga0501076_0207012_175_876 224
241 3300049592 Ga0501076_0223263 Ga0501076_0223263_420_1115 224
242 3300049650 Ga0501199_005231 Ga0501199_005231_448_1134 224
243 3300049651 Ga0501201_001334 Ga0501201_001334_678_1364 224
244 3300049652 Ga0501202_003039 Ga0501202_003039_802_1488 224
245 3300049653 Ga0501206_010396 Ga0501206_010396_164_850 224
246 3300049654 Ga0501207_001659 Ga0501207_001659_83_769 224
247 3300049657 Ga0501210_000543 Ga0501210_000543_194_880 224
248 3300049662 Ga0501222_000897 Ga0501222_000897_1559_2245 224
249 3300049668 Ga0501233_002158 Ga0501233_002158_2175_2861 224
250 3300049669 Ga0501235_001831 Ga0501235_001831_2892_3578 224
251 3300049674 Ga0501242_002290 Ga0501242_002290_13_699 224
252 3300049679 Ga0501249_008055 Ga0501249_008055_1172_1858 224
253 3300049683 Ga0501253_001095 Ga0501253_001095_1790_2476 224
254 3300049688 Ga0501259_020485 Ga0501259_020485_69_755 224
255 3300049704 Ga0501221_001565 Ga0501221_001565_1181_1867 224
256 3300049743 Ga0501081_0170939 Ga0501081_0170939_310_1011 224
257 3300049744 Ga0501083_0054881 Ga0501083_0054881_1277_1978 224
258 3300049757 Ga0501232_000489 Ga0501232_000489_1018_1704 224
259 3300049761 Ga0501264_001982 Ga0501264_001982_1273_1959 224
260 3300049764 Ga0501267_000344 Ga0501267_000344_674_1360 224
261 3300049769 Ga0501272_002002 Ga0501272_002002_642_1328 224
262 3300049771 Ga0501274_000189 Ga0501274_000189_995_1681 224
263 3300049773 Ga0501276_003171 Ga0501276_003171_89_775 224
264 3300049779 Ga0501283_004200 Ga0501283_004200_197_883 224
265 3300049822 Ga0501035_0014361 Ga0501035_0014361_3525_4199 224
266 3300049823 Ga0501044_0000834 Ga0501044_0000834_28823_29497 224
267 3300050489 nmdc:mga03683_188255_c1 nmdc:mga03683_188255_c1_193_879 224
268 3300050493 nmdc:mga0k408_73935_c1 nmdc:mga0k408_73935_c1_741_1427 224
269 3300050496 nmdc:mga07m45_14950_c1 nmdc:mga07m45_14950_c1_2190_2876 224
270 3300050510 nmdc:mga06r32_159680_c1 nmdc:mga06r32_159680_c1_311_1006 224
271 3300054114 Ga0501084_0025839 Ga0501084_0025839_3587_4288 224
272 iso_pu_bacteria 8021648035 8021650928 224
273 3300002737 JGI25162J39368_1004902 JGI25162J39368_10049022 225
274 3300003856 Ga0058692_1000212 Ga0058692_10002125 225
275 3300005347 Ga0070668_100038174 Ga0070668_1000381744 225
276 3300006051 Ga0075364_10429975 Ga0075364_104299752 225
277 3300009011 Ga0105251_10003055 Ga0105251_100030556 225
278 3300009011 Ga0105251_10027001 Ga0105251_100270014 225
279 3300009036 Ga0105244_10004445 Ga0105244_100044455 225
280 3300009092 Ga0105250_10007197 Ga0105250_100071974 225
281 3300009092 Ga0105250_10015968 Ga0105250_100159683 225
282 3300011119 Ga0105246_10013344 Ga0105246_100133444 225
283 3300013100 Ga0157373_10000355 Ga0157373_1000035512 225
284 3300013102 Ga0157371_10000391 Ga0157371_1000039153 225
285 3300013105 Ga0157369_10016939 Ga0157369_100169395 225
286 3300013306 Ga0163162_10092914 Ga0163162_100929144 225
287 3300013307 Ga0157372_10124930 Ga0157372_101249303 225
288 3300013307 Ga0157372_10271936 Ga0157372_102719364 225
289 3300015261 Ga0182006_1009191 Ga0182006_10091915 225
290 3300016635 Ga0183361_10790 Ga0183361_107902 225
291 3300025233 Ga0209437_100199 Ga0209437_10019999 225
292 3300025711 Ga0207696_1000254 Ga0207696_100025457 225
293 3300025711 Ga0207696_1002664 Ga0207696_10026648 225
294 3300025728 Ga0207655_1003806 Ga0207655_100380611 225
295 3300025728 Ga0207655_1004093 Ga0207655_10040934 225
296 3300025728 Ga0207655_1004219 Ga0207655_10042194 225
297 3300025735 Ga0207713_1000001 Ga0207713_100000197 225
298 3300025735 Ga0207713_1031109 Ga0207713_10311093 225
299 3300025972 Ga0207668_10016014 Ga0207668_100160144 225
300 3300027312 Ga0209371_1001848 Ga0209371_10018485 225
301 3300030500 Ga0268256_1005206 Ga0268256_10052063 225
302 3300041405 Ga0439438_002541 Ga0439438_002541_1068_1760 225
303 3300041405 Ga0439438_009073 Ga0439438_009073_1728_2486 225
304 3300041407 Ga0439447_003080 Ga0439447_003080_3051_3809 225
305 3300041411 Ga0439466_0000012 Ga0439466_0000012_143544_144302 225
306 3300042016 Ga0439463_002358 Ga0439463_002358_783_1541 225
307 3300042146 Ga0450907_000186 Ga0450907_000186_9655_10413 225
308 3300042439 Ga0439464_0033849 Ga0439464_0033849_37_795 225
309 3300046452 Ga0495617_007063 Ga0495617_007063_1464_2141 225
310 3300046458 Ga0495591_000028 Ga0495591_000028_107051_107728 225
311 3300046458 Ga0495591_035467 Ga0495591_035467_23_781 225
312 3300046500 Ga0495596_0009103 Ga0495596_0009103_2490_3167 225
313 3300046522 Ga0495643_0017324 Ga0495643_0017324_1696_2454 225
314 3300046522 Ga0495643_0159676 Ga0495643_0159676_23_712 225
315 3300046530 Ga0495654_0000032 Ga0495654_0000032_119509_120186 225
316 3300046691 Ga0495670_0075208 Ga0495670_0075208_40_729 225
317 3300046810 Ga0495660_0014782 Ga0495660_0014782_516_1274 225
318 3300047446 Ga0495679_017662 Ga0495679_017662_169_927 225
319 3300048904 Ga0496101_0001513 Ga0496101_0001513_4499_5176 225
320 3300048905 Ga0496102_0022912 Ga0496102_0022912_912_1679 225
321 3300048905 Ga0496102_0201425 Ga0496102_0201425_1099_1857 225
322 3300048919 Ga0496116_0022806 Ga0496116_0022806_2881_3558 225
323 3300048919 Ga0496116_0062772 Ga0496116_0062772_338_1096 225
324 3300048920 Ga0496117_0000199 Ga0496117_0000199_91803_92570 225
325 3300048920 Ga0496117_0000241 Ga0496117_0000241_88812_89570 225
326 3300048921 Ga0496118_0000381 Ga0496118_0000381_48060_48827 225
327 3300048921 Ga0496118_0002672 Ga0496118_0002672_12016_12774 225
328 3300048922 Ga0496119_0000110 Ga0496119_0000110_88986_89663 225
329 3300048922 Ga0496119_0055554 Ga0496119_0055554_1365_2123 225
330 3300048922 Ga0496119_0241315 Ga0496119_0241315_221_898 225
331 3300048923 Ga0496120_0000151 Ga0496120_0000151_88982_89659 225
332 3300048923 Ga0496120_0001770 Ga0496120_0001770_4553_5230 225
333 3300048924 Ga0496121_0000131 Ga0496121_0000131_87288_88046 225
334 3300048925 Ga0496122_0001968 Ga0496122_0001968_10409_11176 225
335 3300048925 Ga0496122_0006388 Ga0496122_0006388_4102_4779 225
336 3300048925 Ga0496122_0083658 Ga0496122_0083658_1144_1902 225
337 3300048926 Ga0496123_0003779 Ga0496123_0003779_10798_11565 225
338 3300048926 Ga0496123_0009696 Ga0496123_0009696_3699_4376 225
339 3300048926 Ga0496123_0038683 Ga0496123_0038683_1365_2123 225
340 3300048927 Ga0496124_0015297 Ga0496124_0015297_932_1609 225
341 3300048929 Ga0496126_0025759 Ga0496126_0025759_370_1047 225
342 3300050491 nmdc:mga00v17_135643_c1 nmdc:mga00v17_135643_c1_126_893 225
343 3300050491 nmdc:mga00v17_174210_c1 nmdc:mga00v17_174210_c1_140_898 225
344 3300050491 nmdc:mga00v17_25318_c1 nmdc:mga00v17_25318_c1_896_1573 225
345 3300053156 Ga0500622_0013175 Ga0500622_0013175_662_1351 225

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03783

CsgG

Curli production assembly/transport component CsgG

79

265

0.87

PF04052

TolB_N

TolB amino-terminal domain

80

186

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7jil-assembly1.cif.gz_j 70s ribosome flavobacterium johnsoniae 0.7642 121 209
4uv2-assembly2.cif.gz_N structure of the curli transport lipoprotein csgg in a non-lipidated, pre-pore conformation 0.6918 30 221
4uv2-assembly2.cif.gz_J structure of the curli transport lipoprotein csgg in a non-lipidated, pre-pore conformation 0.6778 30 221
4uv2-assembly7.cif.gz_E structure of the curli transport lipoprotein csgg in a non-lipidated, pre-pore conformation 0.6767 33 221
4uv2-assembly1.cif.gz_B structure of the curli transport lipoprotein csgg in a non-lipidated, pre-pore conformation 0.6767 32 221
ID Description Score Start End Superfamily
af_A0A0R4IY99_1_497_2.60.40.60 Mainly Beta;Sandwich;Immunoglobulin-like;Cadherins 0.7527 149 171 2.60.40.60
af_C0P5F8_195_302_3.30.420.100 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.7138 153 171 3.30.420.100
af_C0P790_186_383_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.6958 144 172 2.130.10.10
af_I1LBC5_694_798_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.6371 151 178 2.60.40.10
af_B8A580_83_200_2.60.40.3210 Mainly Beta;Sandwich;Immunoglobulin-like;Zona pellucida, ZP-N domain 0.6358 126 178 2.60.40.3210
ID Description Score Start End GO Terms
AF-A0A811A4W8-F1-model_v4 deleted 0.8803 31 225
AF-A0A4P7LGM7-F1-model_v4 Curli production assembly protein CsgG 0.8801 20 225 GO:0005886
GO:0030288
AF-A0A1G6VC65-F1-model_v4 Curli biogenesis system outer membrane secretion channel CsgG 0.8798 20 225 GO:0005886
GO:0030288
AF-A0A2L1GRB7-F1-model_v4 Curli production assembly protein CsgG 0.8797 20 225 GO:0005886
GO:0030288
AF-A0A850F9X7-F1-model_v4 deleted 0.8771 20 224

Feature Viewer

pLDDT pTM Quality
76.33 0.69 Medium
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Predicted Structure (AlphaFold2)

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