F416068

General Info

Members Datasets Scaffolds Average Seq Length
344 179 688 253

Family's Representative Sequence

Representative Sequence 3300042157|Ga0439458_0033014|Ga0439458_0033014_220_1113
Length 297
Sequence MRIAGYTNGAAADESPPTFAADVKTSGEAVKMRSFLMPISRYVALFLLIMACGYAHADGVPDDCTQLIVGMAPTWNSMRGEMRLFERPRGGDWSAVAGPFPVLFGKNGLAWGIGLAAQNEPGLRKKERDGRAPAGVFEIGQVFGYEAHLPAGGDYPYHQVTEADIWSDDPRSPNYNRHIVIDPKNPPDNYTHEKMRSGDFAYHWLMEIRHNSDPPVPGAGSAIFFHIRRGVNRATTGCTTMAQDNLVKLITWLRAKRHPCYALLPADEYDKKWRSWNLPSPDAFRHPPQAGSPSLPR

Samples

Sample ID Description Type Environment
1 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
29 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
30 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
31 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
32 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
38 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
39 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
40 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
44 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
45 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
46 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
49 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
50 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
56 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
59 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
60 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
61 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
62 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
67 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
76 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
77 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
78 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
79 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
86 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
87 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
89 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
129 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
130 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
131 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
132 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
133 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
134 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
135 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
136 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
139 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
140 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
141 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
142 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
143 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
144 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
145 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
146 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
149 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
150 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
151 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
155 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
156 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
157 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
158 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
159 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
162 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
165 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
166 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
167 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
168 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
169 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
170 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
171 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
172 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
173 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
174 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
178 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
179 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.72
Rhizosphere 90.7
Stem 0
Stem Tuber 0
Unclassified 25.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439458_0033014 3300042157 Bacteria 1239
2 SwRhRL3b_contig_1901923 2162886006 Bacteria 3234
3 SwRhRL2b_contig_3005901 2162886007 Bacteria 2047
4 JGI25405J52794_10000536 3300003911 Bacteria 5514
5 Ga0065704_10009596 3300005289 Bacteria 3303
6 Ga0065704_10292367 3300005289 Unclassified 901
7 Ga0065712_10000505 3300005290 Bacteria 11721
8 Ga0065712_10072808 3300005290 Bacteria 4604
9 Ga0065715_10003422 3300005293 Bacteria 4043
10 Ga0065715_10089311 3300005293 Bacteria 11308
11 Ga0065715_10103813 3300005293 Bacteria 3006
12 Ga0065715_10181401 3300005293 Bacteria 1470
13 Ga0065715_10185084 3300005293 Bacteria 1448
14 Ga0065715_10188947 3300005293 Unclassified 1427
15 Ga0065707_10005597 3300005295 Bacteria 4991
16 Ga0070683_100014435 3300005329 Bacteria 6909
17 Ga0070683_100039914 3300005329 Bacteria 4312
18 Ga0070690_100099463 3300005330 Bacteria 1927
19 Ga0070670_100122564 3300005331 Bacteria 2243
20 Ga0070670_100300887 3300005331 Unclassified 1403
21 Ga0070682_100213512 3300005337 Bacteria 1369
22 Ga0068868_100067105 3300005338 Bacteria 2854
23 Ga0070660_100114775 3300005339 Bacteria 2146
24 Ga0070660_100139683 3300005339 Unclassified 1943
25 Ga0070689_100002564 3300005340 Bacteria 11912
26 Ga0070689_100024789 3300005340 Bacteria 4502
27 Ga0070689_100122136 3300005340 Bacteria 2081
28 Ga0070661_100097232 3300005344 Unclassified 2186
29 Ga0070661_100268489 3300005344 Bacteria 1321
30 Ga0070668_100054933 3300005347 Bacteria 3073
31 Ga0070669_100259776 3300005353 Bacteria 1385
32 Ga0070669_100301134 3300005353 Bacteria 1289
33 Ga0070675_100004262 3300005354 Bacteria 10891
34 Ga0070675_100012480 3300005354 Bacteria 6658
35 Ga0070675_100340224 3300005354 Unclassified 1329
36 Ga0070674_100010609 3300005356 Bacteria 5578
37 Ga0070673_100034829 3300005364 Bacteria 3814
38 Ga0070673_100055701 3300005364 Bacteria 3116
39 Ga0070688_100066846 3300005365 Bacteria 2288
40 Ga0070688_100074067 3300005365 Bacteria 2185
41 Ga0070688_100229672 3300005365 Unclassified 1312
42 Ga0070659_100002790 3300005366 Bacteria 12436
43 Ga0070659_100540759 3300005366 Bacteria 996
44 Ga0070667_100011843 3300005367 Bacteria 7211
45 Ga0070667_100548043 3300005367 Bacteria 1063
46 Ga0070709_10091929 3300005434 Bacteria 2003
47 Ga0070714_100502064 3300005435 Unclassified 1157
48 Ga0070713_100139389 3300005436 Bacteria 2147
49 Ga0070713_100175962 3300005436 Unclassified 1920
50 Ga0070713_100434672 3300005436 Bacteria 1230
51 Ga0070710_10239551 3300005437 Unclassified 1162
52 Ga0070710_10402703 3300005437 Unclassified 917
53 Ga0070711_100185135 3300005439 Unclassified 1596
54 Ga0070708_100023382 3300005445 Bacteria 5256
55 Ga0070708_100038604 3300005445 Bacteria 4173
56 Ga0070708_100060951 3300005445 Bacteria 3369
57 Ga0070708_100356807 3300005445 Bacteria 1378
58 Ga0070663_100007939 3300005455 Bacteria 6501
59 Ga0070678_100014714 3300005456 Bacteria 4947
60 Ga0070678_100061609 3300005456 Bacteria 2766
61 Ga0070678_100333583 3300005456 Bacteria 1299
62 Ga0070662_100120235 3300005457 Bacteria 2012
63 Ga0070662_100139963 3300005457 Bacteria 1874
64 Ga0070681_10216657 3300005458 Unclassified 1830
65 Ga0068867_100068673 3300005459 Bacteria 2645
66 Ga0068867_100682683 3300005459 Bacteria 904
67 Ga0070685_10009667 3300005466 Bacteria 4992
68 Ga0070685_10119273 3300005466 Bacteria 1636
69 Ga0070706_100000311 3300005467 Bacteria 59149
70 Ga0070706_100022162 3300005467 Bacteria 5848
71 Ga0070706_100039194 3300005467 Bacteria 4374
72 Ga0070706_100089601 3300005467 Bacteria 2852
73 Ga0070706_100096850 3300005467 Bacteria 2739
74 Ga0070706_100121555 3300005467 Bacteria 2434
75 Ga0070706_100465893 3300005467 Bacteria 1176
76 Ga0070707_100020928 3300005468 Bacteria 6176
77 Ga0070707_100044184 3300005468 Bacteria 4265
78 Ga0070707_100109852 3300005468 Bacteria 2674
79 Ga0070707_100177460 3300005468 Bacteria 2076
80 Ga0070707_100204190 3300005468 Bacteria 1926
81 Ga0070698_100008210 3300005471 Bacteria 11294
82 Ga0070698_100010181 3300005471 Bacteria 10045
83 Ga0070698_100019584 3300005471 Bacteria 7100
84 Ga0070698_100031452 3300005471 Bacteria 5502
85 Ga0070698_100546925 3300005471 Bacteria 1097
86 Ga0070699_100081162 3300005518 Bacteria 2827
87 Ga0070699_100126512 3300005518 Bacteria 2250
88 Ga0070679_100125825 3300005530 Bacteria 2545
89 Ga0070684_100125843 3300005535 Bacteria 2308
90 Ga0070697_100023796 3300005536 Bacteria 4874
91 Ga0070697_100032652 3300005536 Bacteria 4190
92 Ga0070697_100043017 3300005536 Bacteria 3656
93 Ga0070697_100105530 3300005536 Bacteria 2344
94 Ga0070697_100562490 3300005536 Unclassified 1000
95 Ga0070672_100288923 3300005543 Bacteria 1388
96 Ga0070686_100062618 3300005544 Bacteria 2407
97 Ga0070696_100027907 3300005546 Unclassified 3850
98 Ga0070696_100218787 3300005546 Bacteria 1428
99 Ga0070665_100013781 3300005548 Bacteria 8134
100 Ga0070665_100058609 3300005548 Bacteria 3860
101 Ga0070665_100089311 3300005548 Bacteria 3087
102 Ga0070665_100228795 3300005548 Unclassified 1859
103 Ga0070664_100257978 3300005564 Unclassified 1568
104 Ga0068856_100633977 3300005614 Bacteria 1089
105 Ga0070702_100227931 3300005615 Bacteria 1250
106 Ga0068859_100106388 3300005617 Unclassified 2865
107 Ga0068864_100390399 3300005618 Unclassified 1321
108 Ga0068858_100039644 3300005842 Unclassified 4367
109 Ga0068860_100587162 3300005843 Bacteria 1119
110 Ga0081455_10002160 3300005937 Bacteria 23466
111 Ga0081455_10033124 3300005937 Bacteria 4647
112 Ga0081455_10034915 3300005937 Bacteria 4501
113 Ga0081540_1000014 3300005983 Bacteria 179266
114 Ga0081540_1010784 3300005983 Bacteria 6144
115 Ga0081539_10110239 3300005985 Unclassified 1387
116 Ga0070717_10000772 3300006028 Bacteria 20933
117 Ga0070717_10038079 3300006028 Unclassified 3907
118 Ga0070717_10052360 3300006028 Unclassified 3363
119 Ga0070717_10092415 3300006028 Bacteria 2556
120 Ga0070717_10125198 3300006028 Bacteria 2206
121 Ga0070717_10157830 3300006028 Bacteria 1966
122 Ga0070715_10046947 3300006163 Unclassified 1838
123 Ga0070716_100215784 3300006173 Unclassified 1285
124 Ga0070712_100040798 3300006175 Bacteria 3183
125 Ga0070712_100264929 3300006175 Bacteria 1378
126 Ga0070712_100429395 3300006175 Unclassified 1096
127 Ga0097621_100045083 3300006237 Bacteria 3560
128 Ga0097621_100346342 3300006237 Bacteria 1320
129 Ga0068871_100169513 3300006358 Bacteria 1870
130 Ga0075434_100785223 3300006871 Bacteria 969
131 Ga0097620_100106391 3300006931 Unclassified 2865
132 Ga0075435_100470496 3300007076 Bacteria 1085
133 Ga0099795_10151610 3300007788 Unclassified 950
134 Ga0105240_10524549 3300009093 Unclassified 1314
135 Ga0105245_10045506 3300009098 Bacteria 3919
136 Ga0105247_10027046 3300009101 Bacteria 3469
137 Ga0114129_10000103 3300009147 Bacteria 83612
138 Ga0114129_10116474 3300009147 Bacteria 3682
139 Ga0114129_10598757 3300009147 Bacteria 1428
140 Ga0105241_10127949 3300009174 Bacteria 2053
141 Ga0105237_10139657 3300009545 Bacteria 2417
142 Ga0105238_10563757 3300009551 Unclassified 1144
143 Ga0105239_10044594 3300010375 Bacteria 4861
144 Ga0105239_10053190 3300010375 Bacteria 4442
145 Ga0105246_10269214 3300011119 Bacteria 1361
146 Ga0105246_10437826 3300011119 Unclassified 1095
147 Ga0157373_10159407 3300013100 Unclassified 1588
148 Ga0157371_10087609 3300013102 Unclassified 2205
149 Ga0157374_10050809 3300013296 Bacteria 3855
150 Ga0157374_10064898 3300013296 Unclassified 3428
151 Ga0157374_10073694 3300013296 Bacteria 3222
152 Ga0157374_10127197 3300013296 Bacteria 2463
153 Ga0157374_10171437 3300013296 Bacteria 2117
154 Ga0157374_10470425 3300013296 Bacteria 1259
155 Ga0157374_10801652 3300013296 Bacteria 958
156 Ga0157378_10015204 3300013297 Bacteria 6740
157 Ga0157378_10031108 3300013297 Bacteria 4713
158 Ga0157378_10099503 3300013297 Bacteria 2653
159 Ga0157378_10486040 3300013297 Unclassified 1231
160 Ga0163162_10286421 3300013306 Bacteria 1779
161 Ga0157372_10580485 3300013307 Bacteria 1306
162 Ga0157375_10058974 3300013308 Bacteria 3800
163 Ga0157375_10121982 3300013308 Bacteria 2717
164 Ga0163163_10284262 3300014325 Bacteria 1706
165 Ga0157377_10030738 3300014745 Bacteria 2912
166 Ga0182005_1019511 3300015265 Unclassified 1868
167 Ga0207666_1000266 3300025271 Bacteria 7580
168 Ga0207673_1000361 3300025290 Bacteria 4596
169 Ga0207697_10001854 3300025315 Bacteria 11304
170 Ga0207697_10002512 3300025315 Bacteria 9453
171 Ga0207697_10003217 3300025315 Bacteria 8123
172 Ga0207697_10004079 3300025315 Bacteria 7064
173 Ga0207697_10004488 3300025315 Bacteria 6660
174 Ga0207697_10006756 3300025315 Bacteria 5160
175 Ga0207697_10009243 3300025315 Bacteria 4264
176 Ga0207697_10030828 3300025315 Bacteria 2194
177 Ga0207692_10181546 3300025898 Bacteria 1226
178 Ga0207688_10102989 3300025901 Unclassified 1650
179 Ga0207688_10276871 3300025901 Bacteria 1021
180 Ga0207680_10015309 3300025903 Unclassified 4000
181 Ga0207680_10201657 3300025903 Bacteria 1356
182 Ga0207685_10070417 3300025905 Unclassified 1415
183 Ga0207685_10138474 3300025905 Bacteria 1089
184 Ga0207645_10175217 3300025907 Unclassified 1407
185 Ga0207684_10000337 3300025910 Bacteria 65590
186 Ga0207684_10014376 3300025910 Bacteria 6826
187 Ga0207684_10032951 3300025910 Unclassified 4407
188 Ga0207684_10039965 3300025910 Bacteria 3976
189 Ga0207684_10045025 3300025910 Bacteria 3743
190 Ga0207684_10087241 3300025910 Bacteria 2658
191 Ga0207684_10094958 3300025910 Unclassified 2544
192 Ga0207684_10159340 3300025910 Bacteria 1943
193 Ga0207684_10296939 3300025910 Unclassified 1393
194 Ga0207684_10336377 3300025910 Bacteria 1300
195 Ga0207684_10381367 3300025910 Bacteria 1212
196 Ga0207684_10407575 3300025910 Bacteria 1168
197 Ga0207693_10001641 3300025915 Bacteria 19748
198 Ga0207693_10041304 3300025915 Bacteria 3631
199 Ga0207693_10188228 3300025915 Bacteria 1625
200 Ga0207693_10190814 3300025915 Unclassified 1612
201 Ga0207693_10213767 3300025915 Unclassified 1515
202 Ga0207693_10247903 3300025915 Bacteria 1398
203 Ga0207693_10386977 3300025915 Unclassified 1094
204 Ga0207663_10093182 3300025916 Bacteria 2004
205 Ga0207663_10125099 3300025916 Unclassified 1767
206 Ga0207663_10319152 3300025916 Bacteria 1167
207 Ga0207660_10197875 3300025917 Bacteria 1568
208 Ga0207662_10070045 3300025918 Unclassified 2121
209 Ga0207662_10071686 3300025918 Bacteria 2098
210 Ga0207657_10149303 3300025919 Bacteria 1904
211 Ga0207657_10295638 3300025919 Unclassified 1283
212 Ga0207649_10110349 3300025920 Unclassified 1836
213 Ga0207649_10203723 3300025920 Bacteria 1399
214 Ga0207646_10000191 3300025922 Bacteria 83638
215 Ga0207646_10052200 3300025922 Bacteria 3658
216 Ga0207646_10085800 3300025922 Unclassified 2816
217 Ga0207646_10680932 3300025922 Unclassified 920
218 Ga0207681_10221692 3300025923 Bacteria 1463
219 Ga0207650_10096967 3300025925 Bacteria 2263
220 Ga0207650_10150367 3300025925 Unclassified 1837
221 Ga0207659_10077709 3300025926 Bacteria 2444
222 Ga0207659_10127575 3300025926 Bacteria 1959
223 Ga0207700_10266488 3300025928 Unclassified 1469
224 Ga0207664_10161360 3300025929 Unclassified 1912
225 Ga0207664_10200384 3300025929 Bacteria 1723
226 Ga0207664_10430240 3300025929 Bacteria 1176
227 Ga0207644_10294409 3300025931 Bacteria 1306
228 Ga0207644_10368754 3300025931 Bacteria 1169
229 Ga0207690_10083432 3300025932 Unclassified 2237
230 Ga0207690_10180732 3300025932 Unclassified 1588
231 Ga0207690_10258830 3300025932 Bacteria 1347
232 Ga0207670_10002244 3300025936 Bacteria 10104
233 Ga0207669_10545604 3300025937 Unclassified 935
234 Ga0207665_10066667 3300025939 Unclassified 2450
235 Ga0207665_10105454 3300025939 Bacteria 1974
236 Ga0207691_10004152 3300025940 Bacteria 14071
237 Ga0207661_10014639 3300025944 Bacteria 5753
238 Ga0207661_10016079 3300025944 Bacteria 5515
239 Ga0207661_10578831 3300025944 Bacteria 1030
240 Ga0207651_10038063 3300025960 Bacteria 3157
241 Ga0207651_10174973 3300025960 Bacteria 1697
242 Ga0207668_10012940 3300025972 Bacteria 5124
243 Ga0207668_10149834 3300025972 Bacteria 1804
244 Ga0207668_10299050 3300025972 Unclassified 1327
245 Ga0207658_10257720 3300025986 Bacteria 1485
246 Ga0207658_10431492 3300025986 Unclassified 1164
247 Ga0207677_10586692 3300026023 Bacteria 976
248 Ga0207703_10054934 3300026035 Bacteria 3240
249 Ga0207678_10028905 3300026067 Bacteria 4838
250 Ga0207702_10255370 3300026078 Bacteria 1648
251 Ga0207641_10073780 3300026088 Unclassified 2941
252 Ga0207641_10607695 3300026088 Bacteria 1071
253 Ga0207676_11017983 3300026095 Unclassified 817
254 Ga0207683_10022470 3300026121 Bacteria 5415
255 Ga0207683_10172473 3300026121 Unclassified 1959
256 Ga0207683_10187483 3300026121 Unclassified 1877
257 Ga0268266_10153432 3300028379 Bacteria 2078
258 Ga0268266_10228875 3300028379 Unclassified 1712
259 Ga0268266_10373784 3300028379 Unclassified 1343
260 Ga0268265_10168296 3300028380 Bacteria 1870
261 Ga0268264_10006769 3300028381 Bacteria 9626
262 Ga0268264_10067180 3300028381 Bacteria 3026
263 Ga0373926_0049749 3300035083 Bacteria 1510
264 Ga0373944_0006941 3300035089 Bacteria 3025
265 Ga0373944_0059927 3300035089 Bacteria 1219
266 Ga0373945_0041673 3300035116 Bacteria 1661
267 Ga0373943_0213663 3300035170 Unclassified 1072
268 Ga0373943_0271754 3300035170 Unclassified 956
269 Ga0373946_0011377 3300035171 Bacteria 3320
270 Ga0373935_0020648 3300035692 Bacteria 4026
271 Ga0373927_0184594 3300035695 Bacteria 1368
272 Ga0373933_0180912 3300035724 Bacteria 1345
273 Ga0373947_0020432 3300035725 Bacteria 3823
274 Ga0373947_0101440 3300035725 Bacteria 1809
275 Ga0373937_0609179 3300036401 Bacteria 1037
276 Ga0373925_0020876 3300037068 Bacteria 4774
277 Ga0373925_0067928 3300037068 Unclassified 2689
278 Ga0373925_0231013 3300037068 Bacteria 1479
279 Ga0395899_0078031 3300037312 Bacteria 2415
280 Ga0395899_0088132 3300037312 Unclassified 2252
281 Ga0395899_0243203 3300037312 Unclassified 1238
282 Ga0395900_0010223 3300037418 Bacteria 9596
283 Ga0395900_0024483 3300037418 Bacteria 6182
284 Ga0395900_0290046 3300037418 Unclassified 1625
285 Ga0395900_0443547 3300037418 Unclassified 1255
286 Ga0395898_0010369 3300037466 Bacteria 9745
287 Ga0395898_0029815 3300037466 Bacteria 5461
288 Ga0395905_0051821 3300037471 Bacteria 3844
289 Ga0395901_0070479 3300038443 Unclassified 3642
290 Ga0395901_0301634 3300038443 Bacteria 1661
291 Ga0395901_0492520 3300038443 Unclassified 1249
292 Ga0395901_0958841 3300038443 Unclassified 834
293 Ga0436365_1803930 3300039437 Bacteria 5703
294 Ga0436363_0966942 3300039450 Unclassified 1743
295 Ga0439451_015021 3300042009 Bacteria 1561
296 Ga0451576_0029449 3300045051 Archaea 5875
297 Ga0495584_0158195 3300046491 Bacteria 1151
298 Ga0495628_0100987 3300046516 Bacteria 2226
299 Ga0495630_0341826 3300046517 Unclassified 1145
300 Ga0495598_0034208 3300046537 Bacteria 1447
301 Ga0495645_0018103 3300046543 Bacteria 5056
302 Ga0495635_0046372 3300046663 Bacteria 2998
303 Ga0495659_0006137 3300046664 Bacteria 3799
304 Ga0495658_0056663 3300046683 Bacteria 2236
305 Ga0495669_0005646 3300046684 Bacteria 5222
306 Ga0495624_0069814 3300046690 Bacteria 2188
307 Ga0495604_0034536 3300047317 Bacteria 4000
308 Ga0495684_0000884 3300047471 Bacteria 24273
309 Ga0496101_0261176 3300048904 Bacteria 1351
310 Ga0496102_0118615 3300048905 Bacteria 2470
311 Ga0496102_0496340 3300048905 Bacteria 1142
312 Ga0496103_0272546 3300048906 Bacteria 1089
313 Ga0496104_0033705 3300048907 Bacteria 4773
314 Ga0496104_0054462 3300048907 Bacteria 3781
315 Ga0496104_0054718 3300048907 Bacteria 3772
316 Ga0496105_0176713 3300048908 Unclassified 1749
317 Ga0496106_0024346 3300048909 Bacteria 4500
318 Ga0496106_0247128 3300048909 Bacteria 1426
319 Ga0496107_0203646 3300048910 Unclassified 1471
320 Ga0496108_0034207 3300048911 Bacteria 4222
321 Ga0496108_0065113 3300048911 Bacteria 3072
322 Ga0496108_0252774 3300048911 Bacteria 1533
323 Ga0496109_0009126 3300048912 Bacteria 8443
324 Ga0496109_0247584 3300048912 Unclassified 1678
325 Ga0496110_0063791 3300048913 Bacteria 3256
326 Ga0496111_0477448 3300048914 Unclassified 919
327 Ga0496112_0033909 3300048915 Bacteria 4966
328 Ga0496112_0079764 3300048915 Bacteria 3238
329 Ga0496112_0083609 3300048915 Bacteria 3157
330 Ga0496112_0087899 3300048915 Bacteria 3075
331 Ga0496112_0190593 3300048915 Bacteria 2012
332 Ga0496112_0403686 3300048915 Bacteria 1306
333 Ga0496113_0027939 3300048916 Unclassified 4051
334 Ga0496113_0242965 3300048916 Unclassified 1437
335 Ga0496113_0557361 3300048916 Bacteria 919
336 Ga0496114_0222825 3300048917 Unclassified 1656
337 Ga0496115_0506983 3300048918 Unclassified 969
338 Ga0496115_0550523 3300048918 Unclassified 922
339 nmdc:mga05p37_165946_c1 3300050507 Bacteria 2695
340 nmdc:mga08y16_291171_c1 3300050511 Bacteria 1683
341 nmdc:mga08x19_176287_c1 3300050514 Bacteria 1458
342 nmdc:mga08x19_60196_c1 3300050514 Unclassified 2459
343 Ga0495601_0023439 3300053077 Bacteria 3792
344 Ga0495619_0414967 3300053085 Bacteria 929
345 Ga0439458_0033014
346 SwRhRL3b_contig_1901923
347 SwRhRL2b_contig_3005901
348 JGI25405J52794_10000536
349 Ga0065704_10009596
350 Ga0065704_10292367
351 Ga0065712_10000505
352 Ga0065712_10072808
353 Ga0065715_10003422
354 Ga0065715_10089311
355 Ga0065715_10103813
356 Ga0065715_10181401
357 Ga0065715_10185084
358 Ga0065715_10188947
359 Ga0065707_10005597
360 Ga0070683_100014435
361 Ga0070683_100039914
362 Ga0070690_100099463
363 Ga0070670_100122564
364 Ga0070670_100300887
365 Ga0070682_100213512
366 Ga0068868_100067105
367 Ga0070660_100114775
368 Ga0070660_100139683
369 Ga0070689_100002564
370 Ga0070689_100024789
371 Ga0070689_100122136
372 Ga0070661_100097232
373 Ga0070661_100268489
374 Ga0070668_100054933
375 Ga0070669_100259776
376 Ga0070669_100301134
377 Ga0070675_100004262
378 Ga0070675_100012480
379 Ga0070675_100340224
380 Ga0070674_100010609
381 Ga0070673_100034829
382 Ga0070673_100055701
383 Ga0070688_100066846
384 Ga0070688_100074067
385 Ga0070688_100229672
386 Ga0070659_100002790
387 Ga0070659_100540759
388 Ga0070667_100011843
389 Ga0070667_100548043
390 Ga0070709_10091929
391 Ga0070714_100502064
392 Ga0070713_100139389
393 Ga0070713_100175962
394 Ga0070713_100434672
395 Ga0070710_10239551
396 Ga0070710_10402703
397 Ga0070711_100185135
398 Ga0070708_100023382
399 Ga0070708_100038604
400 Ga0070708_100060951
401 Ga0070708_100356807
402 Ga0070663_100007939
403 Ga0070678_100014714
404 Ga0070678_100061609
405 Ga0070678_100333583
406 Ga0070662_100120235
407 Ga0070662_100139963
408 Ga0070681_10216657
409 Ga0068867_100068673
410 Ga0068867_100682683
411 Ga0070685_10009667
412 Ga0070685_10119273
413 Ga0070706_100000311
414 Ga0070706_100022162
415 Ga0070706_100039194
416 Ga0070706_100089601
417 Ga0070706_100096850
418 Ga0070706_100121555
419 Ga0070706_100465893
420 Ga0070707_100020928
421 Ga0070707_100044184
422 Ga0070707_100109852
423 Ga0070707_100177460
424 Ga0070707_100204190
425 Ga0070698_100008210
426 Ga0070698_100010181
427 Ga0070698_100019584
428 Ga0070698_100031452
429 Ga0070698_100546925
430 Ga0070699_100081162
431 Ga0070699_100126512
432 Ga0070679_100125825
433 Ga0070684_100125843
434 Ga0070697_100023796
435 Ga0070697_100032652
436 Ga0070697_100043017
437 Ga0070697_100105530
438 Ga0070697_100562490
439 Ga0070672_100288923
440 Ga0070686_100062618
441 Ga0070696_100027907
442 Ga0070696_100218787
443 Ga0070665_100013781
444 Ga0070665_100058609
445 Ga0070665_100089311
446 Ga0070665_100228795
447 Ga0070664_100257978
448 Ga0068856_100633977
449 Ga0070702_100227931
450 Ga0068859_100106388
451 Ga0068864_100390399
452 Ga0068858_100039644
453 Ga0068860_100587162
454 Ga0081455_10002160
455 Ga0081455_10033124
456 Ga0081455_10034915
457 Ga0081540_1000014
458 Ga0081540_1010784
459 Ga0081539_10110239
460 Ga0070717_10000772
461 Ga0070717_10038079
462 Ga0070717_10052360
463 Ga0070717_10092415
464 Ga0070717_10125198
465 Ga0070717_10157830
466 Ga0070715_10046947
467 Ga0070716_100215784
468 Ga0070712_100040798
469 Ga0070712_100264929
470 Ga0070712_100429395
471 Ga0097621_100045083
472 Ga0097621_100346342
473 Ga0068871_100169513
474 Ga0075434_100785223
475 Ga0097620_100106391
476 Ga0075435_100470496
477 Ga0099795_10151610
478 Ga0105240_10524549
479 Ga0105245_10045506
480 Ga0105247_10027046
481 Ga0114129_10000103
482 Ga0114129_10116474
483 Ga0114129_10598757
484 Ga0105241_10127949
485 Ga0105237_10139657
486 Ga0105238_10563757
487 Ga0105239_10044594
488 Ga0105239_10053190
489 Ga0105246_10269214
490 Ga0105246_10437826
491 Ga0157373_10159407
492 Ga0157371_10087609
493 Ga0157374_10050809
494 Ga0157374_10064898
495 Ga0157374_10073694
496 Ga0157374_10127197
497 Ga0157374_10171437
498 Ga0157374_10470425
499 Ga0157374_10801652
500 Ga0157378_10015204
501 Ga0157378_10031108
502 Ga0157378_10099503
503 Ga0157378_10486040
504 Ga0163162_10286421
505 Ga0157372_10580485
506 Ga0157375_10058974
507 Ga0157375_10121982
508 Ga0163163_10284262
509 Ga0157377_10030738
510 Ga0182005_1019511
511 Ga0207666_1000266
512 Ga0207673_1000361
513 Ga0207697_10001854
514 Ga0207697_10002512
515 Ga0207697_10003217
516 Ga0207697_10004079
517 Ga0207697_10004488
518 Ga0207697_10006756
519 Ga0207697_10009243
520 Ga0207697_10030828
521 Ga0207692_10181546
522 Ga0207688_10102989
523 Ga0207688_10276871
524 Ga0207680_10015309
525 Ga0207680_10201657
526 Ga0207685_10070417
527 Ga0207685_10138474
528 Ga0207645_10175217
529 Ga0207684_10000337
530 Ga0207684_10014376
531 Ga0207684_10032951
532 Ga0207684_10039965
533 Ga0207684_10045025
534 Ga0207684_10087241
535 Ga0207684_10094958
536 Ga0207684_10159340
537 Ga0207684_10296939
538 Ga0207684_10336377
539 Ga0207684_10381367
540 Ga0207684_10407575
541 Ga0207693_10001641
542 Ga0207693_10041304
543 Ga0207693_10188228
544 Ga0207693_10190814
545 Ga0207693_10213767
546 Ga0207693_10247903
547 Ga0207693_10386977
548 Ga0207663_10093182
549 Ga0207663_10125099
550 Ga0207663_10319152
551 Ga0207660_10197875
552 Ga0207662_10070045
553 Ga0207662_10071686
554 Ga0207657_10149303
555 Ga0207657_10295638
556 Ga0207649_10110349
557 Ga0207649_10203723
558 Ga0207646_10000191
559 Ga0207646_10052200
560 Ga0207646_10085800
561 Ga0207646_10680932
562 Ga0207681_10221692
563 Ga0207650_10096967
564 Ga0207650_10150367
565 Ga0207659_10077709
566 Ga0207659_10127575
567 Ga0207700_10266488
568 Ga0207664_10161360
569 Ga0207664_10200384
570 Ga0207664_10430240
571 Ga0207644_10294409
572 Ga0207644_10368754
573 Ga0207690_10083432
574 Ga0207690_10180732
575 Ga0207690_10258830
576 Ga0207670_10002244
577 Ga0207669_10545604
578 Ga0207665_10066667
579 Ga0207665_10105454
580 Ga0207691_10004152
581 Ga0207661_10014639
582 Ga0207661_10016079
583 Ga0207661_10578831
584 Ga0207651_10038063
585 Ga0207651_10174973
586 Ga0207668_10012940
587 Ga0207668_10149834
588 Ga0207668_10299050
589 Ga0207658_10257720
590 Ga0207658_10431492
591 Ga0207677_10586692
592 Ga0207703_10054934
593 Ga0207678_10028905
594 Ga0207702_10255370
595 Ga0207641_10073780
596 Ga0207641_10607695
597 Ga0207676_11017983
598 Ga0207683_10022470
599 Ga0207683_10172473
600 Ga0207683_10187483
601 Ga0268266_10153432
602 Ga0268266_10228875
603 Ga0268266_10373784
604 Ga0268265_10168296
605 Ga0268264_10006769
606 Ga0268264_10067180
607 Ga0373926_0049749
608 Ga0373944_0006941
609 Ga0373944_0059927
610 Ga0373945_0041673
611 Ga0373943_0213663
612 Ga0373943_0271754
613 Ga0373946_0011377
614 Ga0373935_0020648
615 Ga0373927_0184594
616 Ga0373933_0180912
617 Ga0373947_0020432
618 Ga0373947_0101440
619 Ga0373937_0609179
620 Ga0373925_0020876
621 Ga0373925_0067928
622 Ga0373925_0231013
623 Ga0395899_0078031
624 Ga0395899_0088132
625 Ga0395899_0243203
626 Ga0395900_0010223
627 Ga0395900_0024483
628 Ga0395900_0290046
629 Ga0395900_0443547
630 Ga0395898_0010369
631 Ga0395898_0029815
632 Ga0395905_0051821
633 Ga0395901_0070479
634 Ga0395901_0301634
635 Ga0395901_0492520
636 Ga0395901_0958841
637 Ga0436365_1803930
638 Ga0436363_0966942
639 Ga0439451_015021
640 Ga0451576_0029449
641 Ga0495584_0158195
642 Ga0495628_0100987
643 Ga0495630_0341826
644 Ga0495598_0034208
645 Ga0495645_0018103
646 Ga0495635_0046372
647 Ga0495659_0006137
648 Ga0495658_0056663
649 Ga0495669_0005646
650 Ga0495624_0069814
651 Ga0495604_0034536
652 Ga0495684_0000884
653 Ga0496101_0261176
654 Ga0496102_0118615
655 Ga0496102_0496340
656 Ga0496103_0272546
657 Ga0496104_0033705
658 Ga0496104_0054462
659 Ga0496104_0054718
660 Ga0496105_0176713
661 Ga0496106_0024346
662 Ga0496106_0247128
663 Ga0496107_0203646
664 Ga0496108_0034207
665 Ga0496108_0065113
666 Ga0496108_0252774
667 Ga0496109_0009126
668 Ga0496109_0247584
669 Ga0496110_0063791
670 Ga0496111_0477448
671 Ga0496112_0033909
672 Ga0496112_0079764
673 Ga0496112_0083609
674 Ga0496112_0087899
675 Ga0496112_0190593
676 Ga0496112_0403686
677 Ga0496113_0027939
678 Ga0496113_0242965
679 Ga0496113_0557361
680 Ga0496114_0222825
681 Ga0496115_0506983
682 Ga0496115_0550523
683 nmdc:mga05p37_165946_c1
684 nmdc:mga08y16_291171_c1
685 nmdc:mga08x19_176287_c1
686 nmdc:mga08x19_60196_c1
687 Ga0495601_0023439
688 Ga0495619_0414967

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03734

YkuD

L,D-transpeptidase catalytic domain

81

261

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4y0w-assembly1.cif.gz_E-2 yeaz from pseudomonas aeruginosa 0.7364 28 64
4y0w-assembly1.cif.gz_B-2 yeaz from pseudomonas aeruginosa 0.7299 26 64
4gni-assembly3.cif.gz_A structure of the ssz1 atpase bound to atp and magnesium 0.7174 29 58
5ig4-assembly1.cif.gz_F crystal structure of n. vectensis camkii-a hub 0.7031 43 58
5dmq-assembly1.cif.gz_A crystal structure of mouse erf1 in complex with reverse transcriptase (rt) of moloney murine leukemia virus 0.6699 28 58
ID Description Score Start End Superfamily
3lkbB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8435 46 64 3.40.50.2300
af_P71754_77_184_3.10.450.50 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,; 0.775 44 60 3.10.450.50
af_A0A0R0F1B8_26_96_3.10.20.370 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.7506 28 60 3.10.20.370
af_Q9VTY0_265_486_2.60.40.150 Mainly Beta;Sandwich;Immunoglobulin-like;C2 domain 0.7375 43 60 2.60.40.150
af_A0A2R8QQ93_25_87_3.10.20.370 Alpha Beta;Roll;Ubiquitin-like (UB roll); 0.7026 30 60 3.10.20.370
ID Description Score Start End GO Terms
AF-A0A2V6BPF9-F1-model_v4 YkuD domain-containing protein 0.9376 103 250
AF-A0A2T6CXX3-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9295 21 248 GO:0016740
AF-A0A2V6JJQ6-F1-model_v4 YkuD domain-containing protein 0.926 106 238
AF-A0A2V6BPF9-F1-model_v4 YkuD domain-containing protein 0.9257 103 250
AF-A0A2V6EMP0-F1-model_v4 L,D-TPase catalytic domain-containing protein 0.9247 21 250 GO:0016740

Map