F416065

General Info

Members Datasets Scaffolds Average Seq Length
344 196 336 263

Family's Representative Sequence

Representative Sequence 3300042005|Ga0439448_0004476|Ga0439448_0004476_2449_3273
Length 274
Sequence LIELEPKYVEPQPKPICALVVDDEAPARRRLVELLTKERDIGRILQAENGVAAVALIQEQKPDIVFLDVQMPGIDGFGVINAIGADNMPLTVFVTAYDRFALQAFEADAIDYLLKPFGDRRYERTLARVRERLHVLRSRESENAGSFGPELLKLLEKRSKPGEIWDWIVVKSRDATRLIMTEDIDWIEAAGVYVTVHAGGEEFLYRAGLATVASRLDPFRFVRIHRSSIVNLKSVAFLERRSHGEFDVVLKSGAQLMMSRSYRAEVEAMLGQSL

Samples

Sample ID Description Type Environment
1 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
2 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
3 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
4 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
5 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
6 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
7 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
8 3300000652 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA Metagenome Rhizosphere
9 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
10 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
11 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
12 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
15 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
16 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
17 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
18 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
19 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
20 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
21 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
22 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
23 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
24 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
25 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
28 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
29 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
30 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
31 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
37 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
38 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
39 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
42 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
43 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
76 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
77 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
78 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
79 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
80 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
81 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
82 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
87 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
92 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
136 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
137 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
138 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
139 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
140 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
141 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
142 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
143 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
144 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
145 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
146 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
147 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
148 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
149 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
150 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
151 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
152 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
153 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
154 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
155 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
156 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
157 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
158 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
159 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
160 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
161 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
162 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
163 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
164 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
165 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
166 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
167 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
168 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
169 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
170 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
171 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
172 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
173 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
174 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
175 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
176 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
177 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
178 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
179 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
180 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
181 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
182 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
183 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
184 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
185 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
186 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
187 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
188 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
189 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
190 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
191 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
192 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
193 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
194 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
195 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
196 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.26
Metatranscriptomes 0
Isolates 1.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.59
Nodule 0
Rhizoplane 0
Rhizosphere 87.21
Stem 0
Stem Tuber 0
Unclassified 3.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 ARcpr5oldR_c004587 3300000041 Bacteria 1198
2 ARCol0yngRDRAFT_1003240 3300000652 Bacteria 1197
3 JGI24736J21556_1002289 3300001904 Bacteria 3384
4 JGI24736J21556_1008916 3300001904 Bacteria 1661
5 JGI24736J21556_1023848 3300001904 Unclassified 955
6 JGI24741J21665_1000706 3300001915 Bacteria 10084
7 JGI24740J21852_10002218 3300001979 Bacteria 8877
8 JGI24740J21852_10013056 3300001979 Bacteria 3114
9 JGI24739J22299_10000031 3300001989 Bacteria 38713
10 JGI24739J22299_10000746 3300001989 Bacteria 11827
11 JGI24739J22299_10000764 3300001989 Bacteria 11711
12 JGI24739J22299_10008725 3300001989 Bacteria 3780
13 JGI24739J22299_10020574 3300001989 Bacteria 2357
14 JGI24737J22298_10000100 3300001990 Bacteria 25597
15 JGI24737J22298_10000146 3300001990 Bacteria 21962
16 JGI24737J22298_10001570 3300001990 Bacteria 8131
17 JGI24743J22301_10026854 3300001991 Bacteria 1122
18 JGI24735J21928_10000792 3300002067 Bacteria 11259
19 JGI24735J21928_10001534 3300002067 Bacteria 8186
20 JGI24735J21928_10003739 3300002067 Bacteria 5161
21 JGI24735J21928_10006701 3300002067 Bacteria 3781
22 JGI24735J21928_10008402 3300002067 Bacteria 3338
23 JGI24738J21930_10000047 3300002075 Bacteria 24272
24 JGI24738J21930_10000266 3300002075 Bacteria 14231
25 JGI25153J46596_10021206 3300003215 Bacteria 2428
26 rootH1_10044016 3300003316 Bacteria 7057
27 rootH1_10053464 3300003316 Unclassified 2474
28 rootH1_10053464 3300003323 Bacteria 2011
29 rootH1_10087000 3300003316 Bacteria 3163
30 rootH2_10023938 3300003320 Bacteria 10918
31 rootH2_10097667 3300003320 Bacteria 1753
32 rootL2_10156011 3300003322 Unclassified 3287
33 rootL2_10250178 3300003322 Bacteria 1661
34 Ga0055529_1004838 3300003763 Bacteria 2013
35 Ga0055537_1000628 3300003773 Bacteria 19095
36 Ga0055524_1000226 3300003775 Bacteria 59950
37 Ga0055530_10000106 3300003791 Bacteria 71921
38 Ga0055530_10029776 3300003791 Bacteria 1455
39 Ga0055531_10000012 3300003794 Bacteria 191187
40 Ga0055531_10002131 3300003794 Bacteria 13562
41 Ga0065165_1000705 3300005262 Bacteria 47513
42 Ga0065165_1007060 3300005262 Bacteria 5650
43 Ga0065165_1009470 3300005262 Bacteria 4363
44 Ga0070658_10000742 3300005327 Bacteria 27967
45 Ga0070658_10002405 3300005327 Bacteria 15663
46 Ga0070658_10203311 3300005327 Unclassified 1672
47 Ga0070676_10001184 3300005328 Bacteria 13065
48 Ga0068869_100000850 3300005334 Bacteria 17511
49 Ga0070666_10008534 3300005335 Bacteria 6367
50 Ga0068868_100000298 3300005338 Bacteria 33358
51 Ga0070660_100000486 3300005339 Bacteria 26546
52 Ga0070660_100025736 3300005339 Bacteria 4376
53 Ga0070660_100065839 3300005339 Bacteria 2820
54 Ga0070661_100000776 3300005344 Bacteria 23062
55 Ga0070671_100019510 3300005355 Bacteria 5519
56 Ga0070671_100198992 3300005355 Bacteria 1699
57 Ga0070674_100001346 3300005356 Bacteria 12944
58 Ga0070674_100020172 3300005356 Bacteria 4252
59 Ga0070674_100033638 3300005356 Bacteria 3414
60 Ga0070674_100110343 3300005356 Unclassified 2019
61 Ga0070673_100000094 3300005364 Bacteria 39584
62 Ga0070673_100110080 3300005364 Unclassified 2283
63 Ga0070659_100084607 3300005366 Bacteria 2536
64 Ga0070659_100169663 3300005366 Bacteria 1787
65 Ga0070659_100177286 3300005366 Bacteria 1748
66 Ga0070659_100358085 3300005366 Bacteria 1225
67 Ga0070678_100000036 3300005456 Bacteria 44006
68 Ga0070662_100000479 3300005457 Bacteria 23707
69 Ga0070662_100003496 3300005457 Bacteria 9798
70 Ga0070662_100031380 3300005457 Unclassified 3728
71 Ga0070662_100067433 3300005457 Bacteria 2627
72 Ga0070662_100101215 3300005457 Bacteria 2181
73 Ga0070662_100166812 3300005457 Bacteria 1726
74 Ga0068867_100000202 3300005459 Bacteria 39594
75 Ga0070699_100238258 3300005518 Unclassified 1623
76 Ga0070679_100000236 3300005530 Bacteria 45805
77 Ga0070684_100096067 3300005535 Bacteria 2641
78 Ga0068853_100121672 3300005539 Bacteria 2329
79 Ga0068853_100744850 3300005539 Unclassified 936
80 Ga0070672_100018673 3300005543 Bacteria 5019
81 Ga0070672_100468842 3300005543 Bacteria 1086
82 Ga0068855_100049460 3300005563 Bacteria 4958
83 Ga0068855_100061877 3300005563 Bacteria 4372
84 Ga0070664_100001770 3300005564 Bacteria 17311
85 Ga0070664_100107504 3300005564 Bacteria 2432
86 Ga0068857_100007510 3300005577 Bacteria 9380
87 Ga0068857_100052357 3300005577 Bacteria 3622
88 Ga0068857_100403420 3300005577 Bacteria 1272
89 Ga0068856_100001964 3300005614 Bacteria 21423
90 Ga0068856_100016062 3300005614 Bacteria 7237
91 Ga0068856_100131836 3300005614 Bacteria 2504
92 Ga0068852_100000838 3300005616 Bacteria 20374
93 Ga0068852_100240690 3300005616 Bacteria 1729
94 Ga0068859_100003574 3300005617 Bacteria 15840
95 Ga0068859_100154228 3300005617 Bacteria 2373
96 Ga0068861_100000004 3300005719 Bacteria 105907
97 Ga0068851_10020581 3300005834 Bacteria 3195
98 Ga0068851_10241137 3300005834 Bacteria 1022
99 Ga0068858_100153489 3300005842 Bacteria 2166
100 Ga0075369_10043431 3300006186 Unclassified 1929
101 Ga0097621_100074538 3300006237 Unclassified 2811
102 Ga0075428_100698238 3300006844 Bacteria 1081
103 Ga0075429_100020960 3300006880 Bacteria 5670
104 Ga0068865_100000123 3300006881 Bacteria 39584
105 Ga0097620_100003574 3300006931 Bacteria 15840
106 Ga0097620_100154230 3300006931 Bacteria 2373
107 Ga0105240_10127506 3300009093 Bacteria 3056
108 Ga0105245_10000779 3300009098 Bacteria 28920
109 Ga0114129_10025220 3300009147 Bacteria 8424
110 Ga0105243_10000058 3300009148 Bacteria 131551
111 Ga0105243_10000794 3300009148 Bacteria 30172
112 Ga0105241_10004263 3300009174 Bacteria 10575
113 Ga0105242_10004107 3300009176 Bacteria 11325
114 Ga0105248_10001310 3300009177 Bacteria 27712
115 Ga0105248_10034468 3300009177 Bacteria 5660
116 Ga0105237_10032978 3300009545 Bacteria 5245
117 Ga0105237_10051292 3300009545 Bacteria 4144
118 Ga0105238_10048425 3300009551 Bacteria 4284
119 Ga0105238_10271452 3300009551 Bacteria 1676
120 Ga0105249_10004998 3300009553 Bacteria 11446
121 Ga0105249_10068163 3300009553 Bacteria 3280
122 Ga0105239_10064106 3300010375 Bacteria 4034
123 Ga0105239_10443827 3300010375 Bacteria 1471
124 Ga0105246_10001120 3300011119 Bacteria 15586
125 Ga0105246_10001816 3300011119 Bacteria 12791
126 Ga0105246_10145997 3300011119 Bacteria 1785
127 Ga0157326_1002300 3300012513 Unclassified 2056
128 Ga0157373_10005079 3300013100 Bacteria 9886
129 Ga0157373_10061829 3300013100 Bacteria 2652
130 Ga0157373_10114739 3300013100 Bacteria 1894
131 Ga0157373_10174102 3300013100 Bacteria 1514
132 Ga0157373_10259263 3300013100 Bacteria 1230
133 Ga0157373_10324342 3300013100 Bacteria 1096
134 Ga0157371_10000032 3300013102 Bacteria 230252
135 Ga0157371_10053365 3300013102 Unclassified 2870
136 Ga0157371_10259249 3300013102 Unclassified 1253
137 Ga0157371_10265920 3300013102 Unclassified 1237
138 Ga0157370_10000047 3300013104 Bacteria 124911
139 Ga0157370_10000609 3300013104 Bacteria 44536
140 Ga0157370_10020132 3300013104 Bacteria 6670
141 Ga0157374_10001332 3300013296 Bacteria 21001
142 Ga0157374_10044136 3300013296 Bacteria 4120
143 Ga0157378_10001946 3300013297 Bacteria 18531
144 Ga0157378_10087689 3300013297 Bacteria 2823
145 Ga0163162_10184146 3300013306 Bacteria 2215
146 Ga0157372_10038018 3300013307 Bacteria 5311
147 Ga0157372_10044082 3300013307 Unclassified 4942
148 Ga0157372_10051072 3300013307 Bacteria 4601
149 Ga0157372_10068880 3300013307 Bacteria 3979
150 Ga0157372_10490666 3300013307 Bacteria 1432
151 Ga0157375_10002116 3300013308 Bacteria 17158
152 Ga0157375_10131271 3300013308 Bacteria 2624
153 Ga0157377_10040710 3300014745 Bacteria 2574
154 Ga0157379_10050521 3300014968 Bacteria 3712
155 Ga0157376_10000220 3300014969 Bacteria 39580
156 Ga0163161_10003309 3300017792 Bacteria 11312
157 Ga0163161_10007330 3300017792 Bacteria 7612
158 Ga0209646_1006048 3300025246 Bacteria 2056
159 Ga0209677_103653 3300025253 Bacteria 4850
160 Ga0209148_1000059 3300025254 Bacteria 350224
161 Ga0209148_1001475 3300025254 Bacteria 11828
162 Ga0209565_1000007 3300025263 Bacteria 784361
163 Ga0209455_1000316 3300025272 Bacteria 48052
164 Ga0209673_1001591 3300025273 Bacteria 20040
165 Ga0209675_1012943 3300025291 Bacteria 2648
166 Ga0209758_1001360 3300025297 Bacteria 29314
167 Ga0209050_1000039 3300025298 Bacteria 410069
168 Ga0209050_1002621 3300025298 Bacteria 14803
169 Ga0209256_1000008 3300025299 Bacteria 975723
170 Ga0209257_1000051 3300025304 Bacteria 434166
171 Ga0209257_1001755 3300025304 Bacteria 24052
172 Ga0209257_1014698 3300025304 Bacteria 3335
173 Ga0207656_10009996 3300025321 Bacteria 3536
174 Ga0207680_10073713 3300025903 Bacteria 2123
175 Ga0207647_10000401 3300025904 Bacteria 35481
176 Ga0207647_10001308 3300025904 Bacteria 19149
177 Ga0207647_10002960 3300025904 Bacteria 12781
178 Ga0207647_10009115 3300025904 Bacteria 7065
179 Ga0207647_10010568 3300025904 Bacteria 6513
180 Ga0207647_10052272 3300025904 Bacteria 2522
181 Ga0207645_10002339 3300025907 Bacteria 14958
182 Ga0207705_10000025 3300025909 Bacteria 259826
183 Ga0207705_10000122 3300025909 Bacteria 86442
184 Ga0207705_10003671 3300025909 Bacteria 11676
185 Ga0207705_10176338 3300025909 Unclassified 1611
186 Ga0207654_10000473 3300025911 Bacteria 22991
187 Ga0207695_10003646 3300025913 Bacteria 21515
188 Ga0207671_10003146 3300025914 Bacteria 16741
189 Ga0207671_10065195 3300025914 Bacteria 2708
190 Ga0207657_10001482 3300025919 Bacteria 25109
191 Ga0207657_10003314 3300025919 Bacteria 17226
192 Ga0207657_10015670 3300025919 Bacteria 7332
193 Ga0207649_10002930 3300025920 Bacteria 9395
194 Ga0207652_10001940 3300025921 Bacteria 17897
195 Ga0207694_10022087 3300025924 Bacteria 4825
196 Ga0207694_10057334 3300025924 Bacteria 3028
197 Ga0207659_10066192 3300025926 Bacteria 2621
198 Ga0207687_10002006 3300025927 Bacteria 13974
199 Ga0207644_10043353 3300025931 Bacteria 3192
200 Ga0207644_10285313 3300025931 Bacteria 1326
201 Ga0207690_10000484 3300025932 Bacteria 25673
202 Ga0207690_10124869 3300025932 Bacteria 1875
203 Ga0207690_10171792 3300025932 Bacteria 1625
204 Ga0207706_10004654 3300025933 Bacteria 12858
205 Ga0207706_10004707 3300025933 Bacteria 12781
206 Ga0207706_10022519 3300025933 Bacteria 5654
207 Ga0207706_10103254 3300025933 Bacteria 2508
208 Ga0207706_10105275 3300025933 Bacteria 2482
209 Ga0207686_10000553 3300025934 Bacteria 24058
210 Ga0207686_10469026 3300025934 Unclassified 972
211 Ga0207709_10000202 3300025935 Bacteria 78416
212 Ga0207709_10000254 3300025935 Bacteria 63973
213 Ga0207669_10000028 3300025937 Bacteria 88915
214 Ga0207669_10042492 3300025937 Bacteria 2654
215 Ga0207669_10116952 3300025937 Unclassified 1801
216 Ga0207704_10000133 3300025938 Bacteria 40529
217 Ga0207691_10110357 3300025940 Bacteria 2447
218 Ga0207691_10454557 3300025940 Bacteria 1090
219 Ga0207711_10000724 3300025941 Bacteria 32484
220 Ga0207711_10019167 3300025941 Bacteria 5696
221 Ga0207689_10002392 3300025942 Bacteria 17494
222 Ga0207679_10030412 3300025945 Bacteria 3770
223 Ga0207679_10102144 3300025945 Bacteria 2244
224 Ga0207667_10000002 3300025949 Bacteria 895662
225 Ga0207667_10059163 3300025949 Bacteria 4015
226 Ga0207667_10089008 3300025949 Bacteria 3192
227 Ga0207667_10187648 3300025949 Bacteria 2122
228 Ga0207651_10000012 3300025960 Bacteria 189928
229 Ga0207712_10058713 3300025961 Bacteria 2719
230 Ga0207640_10001855 3300025981 Bacteria 11323
231 Ga0207677_10000323 3300026023 Bacteria 34875
232 Ga0207639_10017179 3300026041 Bacteria 5128
233 Ga0207678_10000780 3300026067 Bacteria 29093
234 Ga0207678_10349692 3300026067 Unclassified 1275
235 Ga0207702_10000824 3300026078 Bacteria 32722
236 Ga0207702_10002599 3300026078 Bacteria 16966
237 Ga0207648_10000628 3300026089 Bacteria 39541
238 Ga0207648_10504727 3300026089 Unclassified 1107
239 Ga0207674_10004152 3300026116 Bacteria 17512
240 Ga0207674_10063920 3300026116 Bacteria 3713
241 Ga0207674_10067011 3300026116 Bacteria 3615
242 Ga0207674_10254580 3300026116 Bacteria 1703
243 Ga0207674_10693065 3300026116 Bacteria 983
244 Ga0207675_100005971 3300026118 Bacteria 11602
245 Ga0207683_10000312 3300026121 Bacteria 44059
246 Ga0207698_10000841 3300026142 Bacteria 17794
247 Ga0207698_10000852 3300026142 Bacteria 17708
248 Ga0207698_10009012 3300026142 Bacteria 6336
249 Ga0207698_10213821 3300026142 Bacteria 1737
250 Ga0316177_1151280 3300030731 Bacteria 2236
251 Ga0265340_10004805 3300031247 Bacteria 7522
252 Ga0307508_10001403 3300031616 Bacteria 27135
253 Ga0307412_10299476 3300031911 Bacteria 1270
254 Ga0307409_100420257 3300031995 Bacteria 1282
255 Ga0307414_10042125 3300032004 Bacteria 3099
256 Ga0307411_10087573 3300032005 Unclassified 2163
257 Ga0395900_0146943 3300037418 Bacteria 2410
258 Ga0395898_0504641 3300037466 Bacteria 1150
259 Ga0395901_0339844 3300038443 Bacteria 1551
260 Ga0439436_0013401 3300041404 Bacteria 2480
261 Ga0439461_0003399 3300041410 Bacteria 2618
262 Ga0439461_0006767 3300041410 Bacteria 2004
263 Ga0439466_0087785 3300041411 Bacteria 977
264 Ga0439465_0000763 3300041413 Bacteria 9988
265 Ga0439465_0010463 3300041413 Unclassified 2913
266 Ga0451841_0271634 3300041498 Bacteria 1159
267 Ga0439431_0001012 3300041997 Bacteria 6111
268 Ga0439431_0006134 3300041997 Bacteria 2655
269 Ga0439442_010437 3300042002 Bacteria 1883
270 Ga0439445_0000117 3300042004 Bacteria 13488
271 Ga0439445_0012074 3300042004 Unclassified 2069
272 Ga0439448_0002529 3300042005 Bacteria 4984
273 Ga0439448_0004476 3300042005 Bacteria 3944
274 Ga0439448_0008541 3300042005 Bacteria 3002
275 Ga0439432_000523 3300042006 Bacteria 14299
276 Ga0439452_009367 3300042010 Bacteria 2887
277 Ga0439455_0003377 3300042012 Bacteria 3041
278 Ga0439455_0048624 3300042012 Bacteria 1103
279 Ga0439462_0000080 3300042015 Bacteria 14594
280 Ga0439462_0003024 3300042015 Bacteria 3994
281 Ga0439446_0005313 3300042156 Bacteria 3310
282 Ga0439458_0002737 3300042157 Bacteria 4247
283 Ga0439434_0000850 3300042435 Bacteria 8810
284 Ga0466969_0066863 3300044656 Bacteria 1735
285 Ga0466972_0002882 3300044658 Bacteria 8511
286 Ga0466972_0006669 3300044658 Bacteria 5793
287 Ga0466966_0179217 3300044684 Bacteria 1286
288 Ga0466961_0011905 3300044693 Bacteria 5560
289 Ga0466961_0020975 3300044693 Bacteria 4204
290 Ga0466963_0002431 3300044694 Bacteria 10419
291 Ga0466963_0053456 3300044694 Bacteria 2681
292 Ga0466964_0017717 3300044706 Bacteria 2727
293 Ga0466964_0020176 3300044706 Bacteria 2565
294 Ga0466971_0001958 3300044719 Bacteria 8715
295 Ga0466971_0051373 3300044719 Bacteria 1855
296 Ga0466968_0028467 3300044735 Bacteria 2304
297 Ga0466970_0076856 3300044765 Bacteria 1799
298 Ga0466970_0132113 3300044765 Bacteria 1372
299 Ga0466957_0064862 3300044842 Bacteria 2248
300 Ga0466960_0004332 3300044901 Bacteria 5537
301 Ga0466960_0008905 3300044901 Bacteria 4123
302 Ga0466959_0013193 3300045049 Bacteria 5986
303 Ga0466959_0034986 3300045049 Bacteria 3715
304 Ga0466958_0040445 3300045836 Bacteria 2802
305 Ga0466958_0051136 3300045836 Bacteria 2501
306 Ga0466958_0400181 3300045836 Bacteria 886
307 Ga0466967_0007838 3300045976 Bacteria 7759
308 Ga0495627_008731 3300046453 Bacteria 3776
309 Ga0495585_0129826 3300046492 Bacteria 1327
310 Ga0495596_0033120 3300046500 Bacteria 2057
311 Ga0495583_0006975 3300046506 Bacteria 7238
312 Ga0495583_0095236 3300046506 Bacteria 1277
313 Ga0495643_0000859 3300046522 Bacteria 32706
314 Ga0495648_0000743 3300046524 Bacteria 34808
315 Ga0495633_0000148 3300046558 Bacteria 93134
316 Ga0495668_0000007 3300046616 Bacteria 552902
317 Ga0495611_0031690 3300046648 Bacteria 2328
318 Ga0495625_0000107 3300046660 Bacteria 125777
319 Ga0495625_0010827 3300046660 Bacteria 7504
320 Ga0495625_0141139 3300046660 Bacteria 1625
321 Ga0495671_0061058 3300046692 Bacteria 1860
322 Ga0495649_0014975 3300046694 Bacteria 4429
323 Ga0495683_0001819 3300047323 Bacteria 13421
324 Ga0495683_0013451 3300047323 Bacteria 4280
325 Ga0495687_000234 3300047443 Bacteria 76988
326 Ga0501241_001673 3300049758 Bacteria 4432
327 Ga0501241_003681 3300049758 Bacteria 2891
328 nmdc:mga0k408_58444_c1 3300050493 Bacteria 2239
329 nmdc:mga09592_170515_c1 3300050508 Bacteria 1882
330 Ga0500643_005462 3300053087 Bacteria 5478
331 Ga0500642_0104208 3300053130 Bacteria 1321
332 Ga0500658_0000191 3300053134 Bacteria 29300
333 Ga0500658_0010202 3300053134 Bacteria 3462
334 Ga0500658_0012801 3300053134 Bacteria 3098
335 Ga0500568_0024981 3300053139 Bacteria 2525
336 Ga0466962_0000884 3300061719 Bacteria 13612

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009147 Ga0114129_10025220 Ga0114129_100252206 222
2 3300006844 Ga0075428_100698238 Ga0075428_1006982382 223
3 3300005518 Ga0070699_100238258 Ga0070699_1002382582 225
4 3300001904 JGI24736J21556_1008916 JGI24736J21556_10089162 235
5 3300001989 JGI24739J22299_10000764 JGI24739J22299_100007649 235
6 3300001990 JGI24737J22298_10000146 JGI24737J22298_100001467 235
7 3300002067 JGI24735J21928_10001534 JGI24735J21928_100015344 235
8 3300002075 JGI24738J21930_10000047 JGI24738J21930_1000004721 235
9 3300005366 Ga0070659_100177286 Ga0070659_1001772862 235
10 3300005457 Ga0070662_100031380 Ga0070662_1000313803 235
11 3300005539 Ga0068853_100744850 Ga0068853_1007448501 235
12 3300006880 Ga0075429_100020960 Ga0075429_1000209605 235
13 3300013102 Ga0157371_10259249 Ga0157371_102592492 235
14 3300013307 Ga0157372_10068880 Ga0157372_100688801 235
15 3300025904 Ga0207647_10002960 Ga0207647_100029603 235
16 3300025933 Ga0207706_10105275 Ga0207706_101052752 235
17 3300050508 nmdc:mga09592_170515_c1 nmdc:mga09592_170515_c1_134_901 235
18 3300005719 Ga0068861_100000004 Ga0068861_10000000490 236
19 3300026118 Ga0207675_100005971 Ga0207675_1000059717 236
20 3300046660 Ga0495625_0000107 Ga0495625_0000107_124837_125658 238
21 3300005842 Ga0068858_100153489 Ga0068858_1001534892 239
22 3300053134 Ga0500658_0000191 Ga0500658_0000191_17323_18090 242
23 3300049758 Ga0501241_003681 Ga0501241_003681_14_781 244
24 3300049758 Ga0501241_001673 Ga0501241_001673_3551_4351 248
25 3300013100 Ga0157373_10114739 Ga0157373_101147392 253
26 3300041410 Ga0439461_0003399 Ga0439461_0003399_548_1315 254
27 3300041997 Ga0439431_0001012 Ga0439431_0001012_60_827 254
28 3300042010 Ga0439452_009367 Ga0439452_009367_1225_1992 254
29 3300042015 Ga0439462_0003024 Ga0439462_0003024_813_1580 254
30 3300042156 Ga0439446_0005313 Ga0439446_0005313_309_1076 254
31 3300044658 Ga0466972_0006669 Ga0466972_0006669_2312_3109 256
32 3300044706 Ga0466964_0017717 Ga0466964_0017717_1686_2483 256
33 3300044735 Ga0466968_0028467 Ga0466968_0028467_572_1369 256
34 3300044765 Ga0466970_0132113 Ga0466970_0132113_451_1248 256
35 3300044901 Ga0466960_0004332 Ga0466960_0004332_4599_5396 256
36 3300045836 Ga0466958_0040445 Ga0466958_0040445_277_1074 256
37 3300053134 Ga0500658_0010202 Ga0500658_0010202_604_1377 256
38 3300005335 Ga0070666_10008534 Ga0070666_100085343 257
39 3300005355 Ga0070671_100198992 Ga0070671_1001989921 257
40 3300005356 Ga0070674_100033638 Ga0070674_1000336382 257
41 3300005457 Ga0070662_100067433 Ga0070662_1000674332 257
42 3300013100 Ga0157373_10174102 Ga0157373_101741023 257
43 3300025903 Ga0207680_10073713 Ga0207680_100737132 257
44 3300025926 Ga0207659_10066192 Ga0207659_100661922 257
45 3300025931 Ga0207644_10285313 Ga0207644_102853132 257
46 3300025933 Ga0207706_10103254 Ga0207706_101032542 257
47 3300025937 Ga0207669_10042492 Ga0207669_100424922 257
48 3300042005 Ga0439448_0008541 Ga0439448_0008541_32_829 257
49 3300003320 rootH2_10097667 rootH2_100976672 259
50 3300005530 Ga0070679_100000236 Ga0070679_10000023643 259
51 3300025921 Ga0207652_10001940 Ga0207652_100019402 259
52 3300031247 Ga0265340_10004805 Ga0265340_100048053 260
53 3300003322 rootL2_10250178 rootL2_102501782 261
54 3300031911 Ga0307412_10299476 Ga0307412_102994762 261
55 iso_pu_bacteria 2643221622 2644127828 261
56 iso_pu_bacteria 2808606401 2809064444 261
57 iso_pu_bacteria 2808606404 2809080391 261
58 iso_pu_bacteria 2808606405 2809084776 261
59 iso_pu_bacteria 2852680915 2852681351 261
60 iso_pu_bacteria 2880518877 2880519219 261
61 3300003316 rootH1_10044016 rootH1_100440163 262
62 3300009545 Ga0105237_10032978 Ga0105237_100329782 263
63 3300026142 Ga0207698_10000852 Ga0207698_100008528 263
64 3300044656 Ga0466969_0066863 Ga0466969_0066863_731_1531 263
65 3300044684 Ga0466966_0179217 Ga0466966_0179217_436_1236 263
66 3300044693 Ga0466961_0011905 Ga0466961_0011905_1603_2403 263
67 3300044765 Ga0466970_0076856 Ga0466970_0076856_394_1194 263
68 3300045049 Ga0466959_0034986 Ga0466959_0034986_1690_2490 263
69 3300001904 JGI24736J21556_1023848 JGI24736J21556_10238481 264
70 3300001989 JGI24739J22299_10000031 JGI24739J22299_1000003125 264
71 3300001989 JGI24739J22299_10020574 JGI24739J22299_100205742 264
72 3300002067 JGI24735J21928_10003739 JGI24735J21928_100037397 264
73 3300002067 JGI24735J21928_10006701 JGI24735J21928_100067012 264
74 3300002067 JGI24735J21928_10008402 JGI24735J21928_100084022 264
75 3300003316 rootH1_10053464 rootH1_100534642 264
76 3300003320 rootH2_10023938 rootH2_100239383 264
77 3300005327 Ga0070658_10000742 Ga0070658_100007429 264
78 3300005366 Ga0070659_100358085 Ga0070659_1003580852 264
79 3300005457 Ga0070662_100101215 Ga0070662_1001012152 264
80 3300005457 Ga0070662_100166812 Ga0070662_1001668122 264
81 3300005577 Ga0068857_100007510 Ga0068857_1000075107 264
82 3300005577 Ga0068857_100052357 Ga0068857_1000523572 264
83 3300005614 Ga0068856_100001964 Ga0068856_1000019642 264
84 3300005614 Ga0068856_100131836 Ga0068856_1001318362 264
85 3300005616 Ga0068852_100000838 Ga0068852_10000083812 264
86 3300005617 Ga0068859_100003574 Ga0068859_1000035745 264
87 3300006931 Ga0097620_100003574 Ga0097620_10000357410 264
88 3300009177 Ga0105248_10001310 Ga0105248_100013105 264
89 3300009177 Ga0105248_10034468 Ga0105248_100344684 264
90 3300009553 Ga0105249_10068163 Ga0105249_100681632 264
91 3300013104 Ga0157370_10000047 Ga0157370_1000004764 264
92 3300013104 Ga0157370_10020132 Ga0157370_100201323 264
93 3300013306 Ga0163162_10184146 Ga0163162_101841462 264
94 3300013307 Ga0157372_10490666 Ga0157372_104906662 264
95 3300014968 Ga0157379_10050521 Ga0157379_100505212 264
96 3300025904 Ga0207647_10000401 Ga0207647_1000040123 264
97 3300025904 Ga0207647_10009115 Ga0207647_100091155 264
98 3300025904 Ga0207647_10010568 Ga0207647_100105683 264
99 3300025909 Ga0207705_10000025 Ga0207705_1000002551 264
100 3300025941 Ga0207711_10000724 Ga0207711_1000072417 264
101 3300025941 Ga0207711_10019167 Ga0207711_100191674 264
102 3300026067 Ga0207678_10349692 Ga0207678_103496922 264
103 3300026078 Ga0207702_10000824 Ga0207702_100008245 264
104 3300026078 Ga0207702_10000824 Ga0207702_100008249 264
105 3300026116 Ga0207674_10063920 Ga0207674_100639202 264
106 3300026116 Ga0207674_10067011 Ga0207674_100670113 264
107 3300026142 Ga0207698_10000841 Ga0207698_100008412 264
108 3300030731 Ga0316177_1151280 Ga0316177_11512802 264
109 3300042005 Ga0439448_0002529 Ga0439448_0002529_56_853 264
110 3300042012 Ga0439455_0003377 Ga0439455_0003377_1970_2767 264
111 3300042157 Ga0439458_0002737 Ga0439458_0002737_2585_3382 264
112 3300044658 Ga0466972_0002882 Ga0466972_0002882_3560_4357 264
113 3300044693 Ga0466961_0020975 Ga0466961_0020975_1358_2155 264
114 3300044694 Ga0466963_0002431 Ga0466963_0002431_2540_3337 264
115 3300044694 Ga0466963_0053456 Ga0466963_0053456_541_1338 264
116 3300044706 Ga0466964_0020176 Ga0466964_0020176_122_919 264
117 3300044719 Ga0466971_0001958 Ga0466971_0001958_5347_6144 264
118 3300044719 Ga0466971_0051373 Ga0466971_0051373_10_807 264
119 3300044842 Ga0466957_0064862 Ga0466957_0064862_925_1722 264
120 3300044901 Ga0466960_0008905 Ga0466960_0008905_203_1000 264
121 3300045049 Ga0466959_0013193 Ga0466959_0013193_2518_3315 264
122 3300045836 Ga0466958_0051136 Ga0466958_0051136_1386_2183 264
123 3300045836 Ga0466958_0400181 Ga0466958_0400181_62_859 264
124 3300045976 Ga0466967_0007838 Ga0466967_0007838_6394_7191 264
125 3300061719 Ga0466962_0000884 Ga0466962_0000884_6377_7174 264
126 3300000041 ARcpr5oldR_c004587 ARcpr5oldR_0045872 265
127 3300000652 ARCol0yngRDRAFT_1003240 ARCol0yngRDRAFT_10032402 265
128 3300001904 JGI24736J21556_1002289 JGI24736J21556_10022892 265
129 3300001915 JGI24741J21665_1000706 JGI24741J21665_10007066 265
130 3300001979 JGI24740J21852_10002218 JGI24740J21852_100022182 265
131 3300001979 JGI24740J21852_10013056 JGI24740J21852_100130562 265
132 3300001989 JGI24739J22299_10000746 JGI24739J22299_100007465 265
133 3300001989 JGI24739J22299_10008725 JGI24739J22299_100087253 265
134 3300001990 JGI24737J22298_10000100 JGI24737J22298_100001009 265
135 3300001990 JGI24737J22298_10001570 JGI24737J22298_100015706 265
136 3300001991 JGI24743J22301_10026854 JGI24743J22301_100268542 265
137 3300002067 JGI24735J21928_10000792 JGI24735J21928_100007927 265
138 3300002067 JGI24735J21928_10003739 JGI24735J21928_100037392 265
139 3300002075 JGI24738J21930_10000266 JGI24738J21930_100002665 265
140 3300003215 JGI25153J46596_10021206 JGI25153J46596_100212062 265
141 3300003316 rootH1_10087000 rootH1_100870005 265
142 3300003322 rootL2_10156011 rootL2_101560112 265
143 3300003763 Ga0055529_1004838 Ga0055529_10048382 265
144 3300003773 Ga0055537_1000628 Ga0055537_10006289 265
145 3300003775 Ga0055524_1000226 Ga0055524_100022655 265
146 3300003791 Ga0055530_10000106 Ga0055530_1000010633 265
147 3300003791 Ga0055530_10029776 Ga0055530_100297762 265
148 3300003794 Ga0055531_10000012 Ga0055531_10000012135 265
149 3300003794 Ga0055531_10002131 Ga0055531_100021315 265
150 3300005262 Ga0065165_1000705 Ga0065165_100070523 265
151 3300005262 Ga0065165_1007060 Ga0065165_10070606 265
152 3300005262 Ga0065165_1009470 Ga0065165_10094703 265
153 3300005327 Ga0070658_10002405 Ga0070658_100024057 265
154 3300005327 Ga0070658_10203311 Ga0070658_102033111 265
155 3300005328 Ga0070676_10001184 Ga0070676_1000118410 265
156 3300005334 Ga0068869_100000850 Ga0068869_10000085013 265
157 3300005338 Ga0068868_100000298 Ga0068868_10000029822 265
158 3300005339 Ga0070660_100000486 Ga0070660_10000048617 265
159 3300005339 Ga0070660_100025736 Ga0070660_1000257365 265
160 3300005339 Ga0070660_100065839 Ga0070660_1000658392 265
161 3300005344 Ga0070661_100000776 Ga0070661_10000077613 265
162 3300005355 Ga0070671_100019510 Ga0070671_1000195103 265
163 3300005356 Ga0070674_100001346 Ga0070674_1000013462 265
164 3300005356 Ga0070674_100020172 Ga0070674_1000201722 265
165 3300005356 Ga0070674_100110343 Ga0070674_1001103432 265
166 3300005364 Ga0070673_100000094 Ga0070673_10000009425 265
167 3300005364 Ga0070673_100110080 Ga0070673_1001100802 265
168 3300005366 Ga0070659_100084607 Ga0070659_1000846072 265
169 3300005366 Ga0070659_100169663 Ga0070659_1001696632 265
170 3300005456 Ga0070678_100000036 Ga0070678_10000003624 265
171 3300005457 Ga0070662_100000479 Ga0070662_1000004799 265
172 3300005457 Ga0070662_100003496 Ga0070662_1000034964 265
173 3300005459 Ga0068867_100000202 Ga0068867_10000020225 265
174 3300005535 Ga0070684_100096067 Ga0070684_1000960671 265
175 3300005539 Ga0068853_100121672 Ga0068853_1001216722 265
176 3300005543 Ga0070672_100018673 Ga0070672_1000186733 265
177 3300005543 Ga0070672_100468842 Ga0070672_1004688422 265
178 3300005563 Ga0068855_100049460 Ga0068855_1000494602 265
179 3300005563 Ga0068855_100061877 Ga0068855_1000618773 265
180 3300005564 Ga0070664_100001770 Ga0070664_1000017707 265
181 3300005564 Ga0070664_100107504 Ga0070664_1001075042 265
182 3300005577 Ga0068857_100403420 Ga0068857_1004034202 265
183 3300005614 Ga0068856_100016062 Ga0068856_1000160623 265
184 3300005616 Ga0068852_100240690 Ga0068852_1002406901 265
185 3300005617 Ga0068859_100154228 Ga0068859_1001542282 265
186 3300005834 Ga0068851_10020581 Ga0068851_100205812 265
187 3300005834 Ga0068851_10241137 Ga0068851_102411371 265
188 3300006186 Ga0075369_10043431 Ga0075369_100434312 265
189 3300006237 Ga0097621_100074538 Ga0097621_1000745382 265
190 3300006881 Ga0068865_100000123 Ga0068865_10000012325 265
191 3300006931 Ga0097620_100154230 Ga0097620_1001542302 265
192 3300009093 Ga0105240_10127506 Ga0105240_101275063 265
193 3300009098 Ga0105245_10000779 Ga0105245_100007798 265
194 3300009148 Ga0105243_10000058 Ga0105243_1000005866 265
195 3300009148 Ga0105243_10000794 Ga0105243_1000079412 265
196 3300009174 Ga0105241_10004263 Ga0105241_100042634 265
197 3300009176 Ga0105242_10004107 Ga0105242_100041073 265
198 3300009545 Ga0105237_10051292 Ga0105237_100512924 265
199 3300009551 Ga0105238_10048425 Ga0105238_100484253 265
200 3300009551 Ga0105238_10271452 Ga0105238_102714522 265
201 3300009553 Ga0105249_10004998 Ga0105249_100049989 265
202 3300010375 Ga0105239_10064106 Ga0105239_100641061 265
203 3300010375 Ga0105239_10443827 Ga0105239_104438272 265
204 3300011119 Ga0105246_10001120 Ga0105246_100011209 265
205 3300011119 Ga0105246_10001816 Ga0105246_100018163 265
206 3300011119 Ga0105246_10145997 Ga0105246_101459971 265
207 3300012513 Ga0157326_1002300 Ga0157326_10023002 265
208 3300013100 Ga0157373_10005079 Ga0157373_100050793 265
209 3300013100 Ga0157373_10061829 Ga0157373_100618292 265
210 3300013100 Ga0157373_10259263 Ga0157373_102592631 265
211 3300013100 Ga0157373_10324342 Ga0157373_103243422 265
212 3300013102 Ga0157371_10000032 Ga0157371_1000003262 265
213 3300013102 Ga0157371_10053365 Ga0157371_100533652 265
214 3300013102 Ga0157371_10265920 Ga0157371_102659201 265
215 3300013104 Ga0157370_10000609 Ga0157370_1000060913 265
216 3300013296 Ga0157374_10001332 Ga0157374_100013329 265
217 3300013296 Ga0157374_10044136 Ga0157374_100441364 265
218 3300013297 Ga0157378_10001946 Ga0157378_100019467 265
219 3300013297 Ga0157378_10087689 Ga0157378_100876892 265
220 3300013307 Ga0157372_10038018 Ga0157372_100380184 265
221 3300013307 Ga0157372_10044082 Ga0157372_100440822 265
222 3300013307 Ga0157372_10051072 Ga0157372_100510722 265
223 3300013308 Ga0157375_10002116 Ga0157375_1000211612 265
224 3300013308 Ga0157375_10131271 Ga0157375_101312712 265
225 3300014745 Ga0157377_10040710 Ga0157377_100407102 265
226 3300014969 Ga0157376_10000220 Ga0157376_1000022025 265
227 3300017792 Ga0163161_10003309 Ga0163161_100033093 265
228 3300017792 Ga0163161_10007330 Ga0163161_100073303 265
229 3300025246 Ga0209646_1006048 Ga0209646_10060482 265
230 3300025253 Ga0209677_103653 Ga0209677_1036532 265
231 3300025254 Ga0209148_1000059 Ga0209148_100005920 265
232 3300025254 Ga0209148_1001475 Ga0209148_10014754 265
233 3300025263 Ga0209565_1000007 Ga0209565_1000007262 265
234 3300025272 Ga0209455_1000316 Ga0209455_100031637 265
235 3300025273 Ga0209673_1001591 Ga0209673_10015915 265
236 3300025291 Ga0209675_1012943 Ga0209675_10129433 265
237 3300025297 Ga0209758_1001360 Ga0209758_100136018 265
238 3300025298 Ga0209050_1000039 Ga0209050_1000039335 265
239 3300025298 Ga0209050_1002621 Ga0209050_10026212 265
240 3300025299 Ga0209256_1000008 Ga0209256_1000008104 265
241 3300025304 Ga0209257_1000051 Ga0209257_1000051335 265
242 3300025304 Ga0209257_1001755 Ga0209257_10017555 265
243 3300025304 Ga0209257_1014698 Ga0209257_10146984 265
244 3300025321 Ga0207656_10009996 Ga0207656_100099963 265
245 3300025904 Ga0207647_10000401 Ga0207647_1000040118 265
246 3300025904 Ga0207647_10001308 Ga0207647_100013089 265
247 3300025904 Ga0207647_10052272 Ga0207647_100522722 265
248 3300025907 Ga0207645_10002339 Ga0207645_100023394 265
249 3300025909 Ga0207705_10000122 Ga0207705_1000012221 265
250 3300025909 Ga0207705_10003671 Ga0207705_100036716 265
251 3300025909 Ga0207705_10176338 Ga0207705_101763382 265
252 3300025911 Ga0207654_10000473 Ga0207654_1000047314 265
253 3300025913 Ga0207695_10003646 Ga0207695_100036463 265
254 3300025914 Ga0207671_10003146 Ga0207671_100031463 265
255 3300025914 Ga0207671_10065195 Ga0207671_100651952 265
256 3300025919 Ga0207657_10001482 Ga0207657_1000148213 265
257 3300025919 Ga0207657_10003314 Ga0207657_100033146 265
258 3300025919 Ga0207657_10015670 Ga0207657_100156705 265
259 3300025920 Ga0207649_10002930 Ga0207649_100029304 265
260 3300025924 Ga0207694_10022087 Ga0207694_100220872 265
261 3300025924 Ga0207694_10057334 Ga0207694_100573342 265
262 3300025927 Ga0207687_10002006 Ga0207687_100020068 265
263 3300025931 Ga0207644_10043353 Ga0207644_100433532 265
264 3300025932 Ga0207690_10000484 Ga0207690_1000048412 265
265 3300025932 Ga0207690_10124869 Ga0207690_101248692 265
266 3300025932 Ga0207690_10171792 Ga0207690_101717922 265
267 3300025933 Ga0207706_10004654 Ga0207706_100046546 265
268 3300025933 Ga0207706_10004707 Ga0207706_100047073 265
269 3300025933 Ga0207706_10022519 Ga0207706_100225193 265
270 3300025934 Ga0207686_10000553 Ga0207686_1000055310 265
271 3300025934 Ga0207686_10469026 Ga0207686_104690261 265
272 3300025935 Ga0207709_10000202 Ga0207709_100002023 265
273 3300025935 Ga0207709_10000254 Ga0207709_1000025434 265
274 3300025937 Ga0207669_10000028 Ga0207669_1000002820 265
275 3300025937 Ga0207669_10116952 Ga0207669_101169522 265
276 3300025938 Ga0207704_10000133 Ga0207704_1000013312 265
277 3300025940 Ga0207691_10110357 Ga0207691_101103572 265
278 3300025940 Ga0207691_10454557 Ga0207691_104545572 265
279 3300025942 Ga0207689_10002392 Ga0207689_1000239213 265
280 3300025945 Ga0207679_10030412 Ga0207679_100304122 265
281 3300025945 Ga0207679_10102144 Ga0207679_101021441 265
282 3300025949 Ga0207667_10000002 Ga0207667_10000002312 265
283 3300025949 Ga0207667_10059163 Ga0207667_100591632 265
284 3300025949 Ga0207667_10089008 Ga0207667_100890082 265
285 3300025949 Ga0207667_10187648 Ga0207667_101876482 265
286 3300025960 Ga0207651_10000012 Ga0207651_10000012132 265
287 3300025961 Ga0207712_10058713 Ga0207712_100587132 265
288 3300025981 Ga0207640_10001855 Ga0207640_100018552 265
289 3300026023 Ga0207677_10000323 Ga0207677_1000032323 265
290 3300026041 Ga0207639_10017179 Ga0207639_100171792 265
291 3300026067 Ga0207678_10000780 Ga0207678_100007807 265
292 3300026078 Ga0207702_10002599 Ga0207702_100025993 265
293 3300026089 Ga0207648_10000628 Ga0207648_1000062825 265
294 3300026089 Ga0207648_10504727 Ga0207648_105047271 265
295 3300026116 Ga0207674_10004152 Ga0207674_100041526 265
296 3300026116 Ga0207674_10254580 Ga0207674_102545801 265
297 3300026116 Ga0207674_10693065 Ga0207674_106930651 265
298 3300026121 Ga0207683_10000312 Ga0207683_1000031223 265
299 3300026142 Ga0207698_10009012 Ga0207698_100090122 265
300 3300026142 Ga0207698_10213821 Ga0207698_102138211 265
301 3300031616 Ga0307508_10001403 Ga0307508_100014031 265
302 3300031995 Ga0307409_100420257 Ga0307409_1004202572 265
303 3300032004 Ga0307414_10042125 Ga0307414_100421253 265
304 3300032005 Ga0307411_10087573 Ga0307411_100875732 265
305 3300037418 Ga0395900_0146943 Ga0395900_0146943_1298_2098 265
306 3300037466 Ga0395898_0504641 Ga0395898_0504641_36_836 265
307 3300038443 Ga0395901_0339844 Ga0395901_0339844_254_1054 265
308 3300041404 Ga0439436_0013401 Ga0439436_0013401_1364_2164 265
309 3300041410 Ga0439461_0006767 Ga0439461_0006767_852_1652 265
310 3300041411 Ga0439466_0087785 Ga0439466_0087785_39_839 265
311 3300041413 Ga0439465_0000763 Ga0439465_0000763_3516_4316 265
312 3300041413 Ga0439465_0010463 Ga0439465_0010463_273_1073 265
313 3300041498 Ga0451841_0271634 Ga0451841_0271634_226_1026 265
314 3300041997 Ga0439431_0006134 Ga0439431_0006134_1474_2274 265
315 3300042002 Ga0439442_010437 Ga0439442_010437_704_1504 265
316 3300042004 Ga0439445_0000117 Ga0439445_0000117_8668_9468 265
317 3300042004 Ga0439445_0012074 Ga0439445_0012074_17_817 265
318 3300042005 Ga0439448_0004476 Ga0439448_0004476_2449_3273 265
319 3300042006 Ga0439432_000523 Ga0439432_000523_1407_2207 265
320 3300042012 Ga0439455_0048624 Ga0439455_0048624_104_907 265
321 3300042015 Ga0439462_0000080 Ga0439462_0000080_288_1088 265
322 3300042435 Ga0439434_0000850 Ga0439434_0000850_7994_8794 265
323 3300046453 Ga0495627_008731 Ga0495627_008731_1927_2727 265
324 3300046492 Ga0495585_0129826 Ga0495585_0129826_473_1273 265
325 3300046500 Ga0495596_0033120 Ga0495596_0033120_1213_2013 265
326 3300046506 Ga0495583_0006975 Ga0495583_0006975_1067_1867 265
327 3300046506 Ga0495583_0095236 Ga0495583_0095236_64_864 265
328 3300046522 Ga0495643_0000859 Ga0495643_0000859_15125_15925 265
329 3300046524 Ga0495648_0000743 Ga0495648_0000743_4248_5048 265
330 3300046558 Ga0495633_0000148 Ga0495633_0000148_50788_51588 265
331 3300046616 Ga0495668_0000007 Ga0495668_0000007_394785_395585 265
332 3300046648 Ga0495611_0031690 Ga0495611_0031690_564_1364 265
333 3300046660 Ga0495625_0010827 Ga0495625_0010827_4561_5361 265
334 3300046660 Ga0495625_0141139 Ga0495625_0141139_328_1128 265
335 3300046692 Ga0495671_0061058 Ga0495671_0061058_256_1056 265
336 3300046694 Ga0495649_0014975 Ga0495649_0014975_134_934 265
337 3300047323 Ga0495683_0001819 Ga0495683_0001819_7027_7827 265
338 3300047323 Ga0495683_0013451 Ga0495683_0013451_2523_3323 265
339 3300047443 Ga0495687_000234 Ga0495687_000234_46748_47548 265
340 3300050493 nmdc:mga0k408_58444_c1 nmdc:mga0k408_58444_c1_1257_2057 265
341 3300053087 Ga0500643_005462 Ga0500643_005462_1714_2514 265
342 3300053130 Ga0500642_0104208 Ga0500642_0104208_277_1077 265
343 3300053134 Ga0500658_0012801 Ga0500658_0012801_464_1264 265
344 3300053139 Ga0500568_0024981 Ga0500568_0024981_190_990 265

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04397

LytTR

LytTr DNA-binding domain

174

271

0.97

PF00072

Response_reg

Response regulator receiver domain

18

127

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d6w-assembly1.cif.gz_A lyttr dna-binding domain of putative methyl-accepting/dna response regulator from bacillus cereus. 0.9154 156 262
2qv0-assembly1.cif.gz_A crystal structure of the response regulatory domain of protein mrke from klebsiella pneumoniae 0.9021 8 126
4e7p-assembly2.cif.gz_A crystal structure of receiver domain of putative narl family response regulator spr1814 from streptococcus pneumoniae in the presence of the phosphoryl analog beryllofluoride 0.9007 8 124
3ffw-assembly1.cif.gz_A crystal structure of chey triple mutant f14q, n59k, e89y complexed with bef3- and mn2+ 0.8983 8 126
6m8o-assembly1.cif.gz_A crystal structure of the receiver domain of lytr from staphylococcus aureus 0.8963 8 122
ID Description Score Start End Superfamily
af_Q2FVQ7_36_146_2.40.50.1020 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);LytTr DNA-binding domain 0.9342 155 261 2.40.50.1020
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9317 8 88 3.40.50.2300
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9237 9 88 3.40.50.2300
af_P60611_135_244_2.40.50.1020 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);LytTr DNA-binding domain 0.9124 157 262 2.40.50.1020
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9099 8 88 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A4Q3FDX0-F1-model_v4 Response regulator 0.9532 8 85 GO:0000160
AF-A0A4Q5YEC4-F1-model_v4 Response regulator 0.95 8 126 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7C7WMN0-F1-model_v4 LytTR family transcriptional regulator 0.9442 173 262 GO:0000156
GO:0003677
AF-A0A7C7U9T4-F1-model_v4 Response regulator 0.9348 1 77 GO:0000160
AF-A0A658JJ30-F1-model_v4 deleted 0.9281 157 262

Feature Viewer

pLDDT pTM Quality
80.05 0.51 Medium
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Predicted Structure (AlphaFold2)

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