F415415

General Info

Members Datasets Scaffolds Average Seq Length
343 260 251 305

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10001390|Ga0070658_100013905
Length 374
Sequence MNARYLLLIILNNAIFHLKYERSLNPTSYELCGERATVAVDHARYQELSVSESPPAKAPTPRPFKPDMTVLYKADPVRGAIWAERFADLAPDVPFRIWPDIGDPAAIRYLVAWQPDDLAVTLPNLEVVFSVGAGVDQLDLTRVPAHLPVVRMIEPGIVDGMVEYVTEAVLAIHRDLFDYALQQAARVWKAMQLRPAASRRIGVLGLGMLGTAVLERLRLFGFACAGWSRSPHEIEGVECFAGDAALDAFLARTDVLICLLPLTDSTRGLLDRRVFAALPQGASVVHVGRGPQLVAGDLLDALNSGHIHSAVIDVTDPEPLPADHPLWSQPRVRITPHIASATCAVTAVDAVLDNLRRHQAGGRMIGEIDRARGY

Samples

Sample ID Description Type Environment
1 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
2 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
3 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
4 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
5 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
6 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
7 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
8 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
9 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
10 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
11 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
12 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
13 2524023207 Ensifer sp. USDA 6670 Isolate Nodule
14 2643221723 Ensifer sp. Root278 Isolate Unclassified
15 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
16 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
17 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
18 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
19 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
20 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
21 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
22 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
23 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
24 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
25 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
26 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
27 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
28 2751185846 Paraburkholderia ribeironis STM 7296 Isolate Unclassified
29 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
30 2791355256 Rhizobium sp. M10 Isolate Nodule
31 2791355262 Rhizobium sp. M1 Isolate Nodule
32 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
33 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
34 2818991467 Bosea vestrisii 3192 Isolate Unclassified
35 2838048938 Rhizobium pisi 27/80 Isolate Nodule
36 2838061910 Rhizobium phaseoli L15 Isolate Nodule
37 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
38 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
39 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
40 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
41 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
42 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
43 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
44 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
45 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
46 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
47 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
48 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
49 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
50 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
51 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
52 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
53 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
54 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
55 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
56 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
57 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
58 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
59 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
60 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
61 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
62 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
63 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
64 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
65 2904564687 Burkholderia sp. 571 Isolate Unclassified
66 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
67 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
68 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
69 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
70 2921643360 Paraburkholderia steynii HC1.1ba Isolate Nodule
71 2928536128 Burkholderia sola 565 Isolate Unclassified
72 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
73 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
74 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
75 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
76 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
77 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
78 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
79 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
80 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
81 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
82 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
83 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
84 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
85 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
86 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
87 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
88 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
89 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
90 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
91 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
92 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
93 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
94 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
95 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
96 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
97 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
98 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
99 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
100 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
101 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
102 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
103 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
104 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
105 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
106 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
107 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
108 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
109 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
110 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
111 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
112 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
113 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
114 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
115 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
116 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
117 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
118 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
119 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
120 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
121 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
122 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
123 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
129 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
130 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
131 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
133 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
134 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
135 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
136 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
152 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
153 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
154 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
156 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
157 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
158 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
159 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
160 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
161 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
162 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
163 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
164 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
165 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
166 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
167 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
168 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
169 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
170 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
171 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
172 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
173 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
174 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
175 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
176 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
177 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
178 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
179 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
180 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
181 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
182 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
183 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
184 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
185 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
186 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
187 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
188 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
189 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
190 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
191 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
192 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
193 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
194 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
195 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
196 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
197 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
198 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
199 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
200 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
201 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
202 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
203 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
204 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
205 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
206 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
207 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
208 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
209 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
210 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
211 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
212 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
213 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
214 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
215 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
216 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
217 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
218 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
219 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
220 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
221 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
222 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
223 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
224 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
225 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
226 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
227 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
228 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
229 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
230 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
231 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
232 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
233 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
234 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
235 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
236 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
237 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
238 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
239 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
240 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
241 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
242 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
243 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
244 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
245 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
246 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
247 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
248 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
249 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
250 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
251 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
252 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
253 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
254 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
255 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
256 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
257 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
258 8024501048 Rhizobium sp. H4 Isolate Nodule
259 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
260 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 73.18
Metatranscriptomes 0
Isolates 26.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.29
Nodule 16.62
Rhizoplane 1.75
Rhizosphere 54.23
Stem 0
Stem Tuber 0
Unclassified 13.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10001309 3300001979 Bacteria 11320
2 JGI24739J22299_10027262 3300001989 Bacteria 1998
3 JGI24738J21930_10010184 3300002075 Bacteria 2098
4 JGI25159J45721_1000156 3300002987 Bacteria 32002
5 JGI25151J46595_10000063 3300003187 Bacteria 146046
6 rootH2_10034421 3300003320 Bacteria 20428
7 rootL2_10126884 3300003322 Bacteria 4681
8 rootL2_10212920 3300003322 Bacteria 1768
9 rootH1_10143903 3300003323 Bacteria 3958
10 rootH1_10327076 3300003323 Bacteria 1802
11 rootH1_10369758 3300003323 Bacteria 1374
12 JGI25160J50197_1000203 3300003354 Bacteria 49418
13 JGI25161J50226_1001580 3300003374 Bacteria 6657
14 Ga0055532_1000661 3300003758 Bacteria 13120
15 Ga0055535_1000251 3300003761 Bacteria 56744
16 Ga0055542_1000280 3300003762 Bacteria 57147
17 Ga0055529_1000213 3300003763 Bacteria 76328
18 Ga0055526_1000192 3300003771 Bacteria 53195
19 Ga0055526_1000308 3300003771 Bacteria 40807
20 Ga0055526_1000319 3300003771 Bacteria 39897
21 Ga0055524_1000031 3300003775 Bacteria 187744
22 Ga0055524_1000042 3300003775 Bacteria 155404
23 Ga0055536_1000640 3300003781 Bacteria 23814
24 Ga0055528_1005566 3300003790 Bacteria 5834
25 Ga0055531_10007282 3300003794 Bacteria 6070
26 Ga0055543_1000349 3300004625 Bacteria 31437
27 Ga0065165_1000672 3300005262 Bacteria 49172
28 Ga0070658_10001390 3300005327 Bacteria 20681
29 Ga0070683_100205823 3300005329 Bacteria 1869
30 Ga0070669_100122110 3300005353 Bacteria 1989
31 Ga0070659_100009069 3300005366 Bacteria 7299
32 Ga0070667_100311777 3300005367 Bacteria 1418
33 Ga0070713_100029545 3300005436 Bacteria 4342
34 Ga0070663_100167837 3300005455 Bacteria 1694
35 Ga0068856_100082168 3300005614 Bacteria 3197
36 Ga0068863_100000752 3300005841 Bacteria 32413
37 Ga0068860_100000719 3300005843 Bacteria 37763
38 Ga0068860_100131407 3300005843 Bacteria 2403
39 Ga0068862_100000044 3300005844 Bacteria 156665
40 Ga0068862_100002584 3300005844 Bacteria 15989
41 Ga0070717_10046082 3300006028 Bacteria 3567
42 Ga0075369_10061526 3300006186 Bacteria 1639
43 Ga0097620_100468649 3300006931 Bacteria 1355
44 Ga0105240_10001481 3300009093 Bacteria 39960
45 Ga0105240_10080441 3300009093 Bacteria 4007
46 Ga0105248_10214849 3300009177 Bacteria 2166
47 Ga0105237_10203633 3300009545 Bacteria 1979
48 Ga0105238_10182946 3300009551 Bacteria 2072
49 Ga0105249_10000045 3300009553 Bacteria 182927
50 Ga0105239_10414418 3300010375 Bacteria 1525
51 Ga0157371_10005849 3300013102 Bacteria 10280
52 Ga0157371_10024006 3300013102 Unclassified 4454
53 Ga0157369_10000059 3300013105 Bacteria 154283
54 Ga0157369_10023634 3300013105 Bacteria 6846
55 Ga0157369_10211568 3300013105 Bacteria 2032
56 Ga0171462_1012 3300013250 Bacteria 208216
57 Ga0157372_10292568 3300013307 Bacteria 1894
58 Ga0157375_10016105 3300013308 Bacteria 6707
59 Ga0183361_10004 3300016635 Bacteria 484183
60 Ga0209436_102318 3300025208 Bacteria 5824
61 Ga0209672_100044 3300025228 Bacteria 270292
62 Ga0209672_100120 3300025228 Bacteria 83650
63 Ga0209147_100039 3300025229 Bacteria 311101
64 Ga0209258_100062 3300025242 Bacteria 311101
65 Ga0209148_1000075 3300025254 Bacteria 311101
66 Ga0209455_1000067 3300025272 Bacteria 311101
67 Ga0209673_1000044 3300025273 Bacteria 290647
68 Ga0209673_1016003 3300025273 Bacteria 2822
69 Ga0209673_1027137 3300025273 Bacteria 1867
70 Ga0209130_1000242 3300025284 Bacteria 69580
71 Ga0209675_1000939 3300025291 Bacteria 18542
72 Ga0209675_1001206 3300025291 Bacteria 15693
73 Ga0209676_1001712 3300025292 Bacteria 18905
74 Ga0209025_1000014 3300025294 Bacteria 865448
75 Ga0209025_1000240 3300025294 Bacteria 128397
76 Ga0209025_1004942 3300025294 Bacteria 11191
77 Ga0209564_1000017 3300025295 Bacteria 594063
78 Ga0209564_1000077 3300025295 Bacteria 281592
79 Ga0209564_1000135 3300025295 Bacteria 188117
80 Ga0209564_1000338 3300025295 Bacteria 90246
81 Ga0209564_1005098 3300025295 Bacteria 7644
82 Ga0209564_1023591 3300025295 Bacteria 2131
83 Ga0209256_1000057 3300025299 Bacteria 281592
84 Ga0209256_1000107 3300025299 Bacteria 186233
85 Ga0209256_1001843 3300025299 Bacteria 19673
86 Ga0207426_1000483 3300025302 Bacteria 60265
87 Ga0209051_1007193 3300025303 Bacteria 6128
88 Ga0209257_1003985 3300025304 Bacteria 11929
89 Ga0207647_10085006 3300025904 Bacteria 1893
90 Ga0207705_10000337 3300025909 Bacteria 42405
91 Ga0207695_10001460 3300025913 Bacteria 39592
92 Ga0207657_10170564 3300025919 Bacteria 1763
93 Ga0207700_10036092 3300025928 Bacteria 3567
94 Ga0207690_10005736 3300025932 Bacteria 7337
95 Ga0207711_10099577 3300025941 Bacteria 2570
96 Ga0207667_10014170 3300025949 Bacteria 9099
97 Ga0207668_10001115 3300025972 Bacteria 15994
98 Ga0207640_10000432 3300025981 Bacteria 25599
99 Ga0207678_10031763 3300026067 Bacteria 4604
100 Ga0207702_10004000 3300026078 Bacteria 13238
101 Ga0207641_10001337 3300026088 Bacteria 24395
102 Ga0209371_1000782 3300027312 Bacteria 26291
103 Ga0209974_10002555 3300027876 Bacteria 6602
104 Ga0268265_10000045 3300028380 Bacteria 180378
105 Ga0268265_10150838 3300028380 Bacteria 1960
106 Ga0268264_10000524 3300028381 Bacteria 48665
107 Ga0268256_1000658 3300030500 Bacteria 26291
108 Ga0307513_10034719 3300031456 Bacteria 5654
109 Ga0307413_10029723 3300031824 Bacteria 3062
110 Ga0307412_10000002 3300031911 Bacteria 743446
111 Ga0307409_100290564 3300031995 Bacteria 1516
112 Ga0307416_100018668 3300032002 Bacteria 4894
113 Ga0307414_10020677 3300032004 Bacteria 4108
114 Ga0307414_10076298 3300032004 Bacteria 2435
115 Ga0395900_0000098 3300037418 Bacteria 158030
116 Ga0395900_0017753 3300037418 Bacteria 7262
117 Ga0395900_0062173 3300037418 Bacteria 3838
118 Ga0395905_0000035 3300037471 Bacteria 272014
119 Ga0395905_0032466 3300037471 Bacteria 4910
120 Ga0395901_0000129 3300038443 Bacteria 97842
121 Ga0466969_0001503 3300044656 Bacteria 12537
122 Ga0466969_0053600 3300044656 Bacteria 1977
123 Ga0466966_0010144 3300044684 Bacteria 6248
124 Ga0466966_0011367 3300044684 Bacteria 5905
125 Ga0466966_0046770 3300044684 Bacteria 2761
126 Ga0466961_0010247 3300044693 Bacteria 5970
127 Ga0466961_0019531 3300044693 Bacteria 4358
128 Ga0466961_0071404 3300044693 Bacteria 2203
129 Ga0466964_0008555 3300044706 Bacteria 3846
130 Ga0466970_0027036 3300044765 Bacteria 3008
131 Ga0466957_0037039 3300044842 Bacteria 2935
132 Ga0466959_0002997 3300045049 Bacteria 10904
133 Ga0466959_0079241 3300045049 Bacteria 2368
134 Ga0466958_0009537 3300045836 Bacteria 5411
135 Ga0495592_0005006 3300046454 Bacteria 9756
136 Ga0495591_000688 3300046458 Bacteria 24710
137 Ga0495629_0022427 3300046459 Bacteria 4502
138 Ga0495629_0029184 3300046459 Bacteria 3913
139 Ga0495629_0035715 3300046459 Bacteria 3512
140 Ga0495641_0041493 3300046461 Bacteria 2137
141 Ga0495651_0003132 3300046462 Bacteria 12753
142 Ga0495653_0002024 3300046463 Bacteria 15962
143 Ga0495653_0004334 3300046463 Bacteria 11476
144 Ga0495650_0007612 3300046471 Bacteria 6469
145 Ga0495580_0001693 3300046472 Bacteria 19368
146 Ga0495580_0003497 3300046472 Bacteria 13364
147 Ga0495582_0000835 3300046473 Bacteria 17016
148 Ga0495662_0013798 3300046476 Bacteria 3932
149 Ga0495664_0000543 3300046477 Bacteria 18992
150 Ga0495594_0018064 3300046499 Bacteria 3734
151 Ga0495596_0000361 3300046500 Bacteria 29267
152 Ga0495596_0025598 3300046500 Bacteria 2384
153 Ga0495596_0036790 3300046500 Bacteria 1938
154 Ga0495607_0099591 3300046501 Bacteria 1559
155 Ga0495607_0144473 3300046501 Bacteria 1224
156 Ga0495606_0057500 3300046507 Bacteria 2504
157 Ga0495608_0007194 3300046511 Bacteria 7871
158 Ga0495610_0005481 3300046512 Bacteria 9005
159 Ga0495610_0112062 3300046512 Bacteria 1207
160 Ga0495618_0006415 3300046514 Bacteria 7139
161 Ga0495618_0045465 3300046514 Bacteria 2769
162 Ga0495628_0007378 3300046516 Bacteria 9518
163 Ga0495628_0021471 3300046516 Bacteria 5309
164 Ga0495630_0002157 3300046517 Bacteria 13699
165 Ga0495630_0026155 3300046517 Bacteria 4319
166 Ga0495631_0038618 3300046518 Bacteria 2122
167 Ga0495648_0002513 3300046524 Bacteria 16835
168 Ga0495648_0004471 3300046524 Bacteria 11939
169 Ga0495648_0008517 3300046524 Bacteria 8060
170 Ga0495666_0000847 3300046526 Bacteria 14183
171 Ga0495666_0011681 3300046526 Bacteria 4378
172 Ga0495642_0009754 3300046528 Bacteria 3677
173 Ga0495642_0079368 3300046528 Bacteria 1380
174 Ga0495652_0003824 3300046529 Bacteria 14696
175 Ga0495652_0005525 3300046529 Bacteria 11893
176 Ga0495665_0000864 3300046531 Bacteria 15839
177 Ga0495665_0018923 3300046531 Bacteria 3701
178 Ga0495640_0000889 3300046533 Bacteria 22941
179 Ga0495640_0056573 3300046533 Bacteria 2679
180 Ga0495587_0000944 3300046536 Bacteria 19117
181 Ga0495587_0022542 3300046536 Bacteria 3877
182 Ga0495645_0003353 3300046543 Bacteria 10855
183 Ga0495667_0197272 3300046559 Bacteria 1289
184 Ga0495634_0001994 3300046642 Bacteria 17391
185 Ga0495611_0028157 3300046648 Bacteria 2459
186 Ga0495635_0006493 3300046663 Bacteria 8156
187 Ga0495635_0018295 3300046663 Bacteria 4890
188 Ga0495635_0094533 3300046663 Bacteria 2043
189 Ga0495661_0012959 3300046665 Bacteria 5615
190 Ga0495599_0028969 3300046678 Bacteria 3470
191 Ga0495599_0034022 3300046678 Bacteria 3203
192 Ga0495623_0042284 3300046679 Bacteria 2903
193 Ga0495623_0108462 3300046679 Bacteria 1685
194 Ga0495646_0001168 3300046680 Bacteria 15336
195 Ga0495646_0001924 3300046680 Bacteria 12490
196 Ga0495646_0024505 3300046680 Bacteria 3800
197 Ga0495669_0042881 3300046684 Bacteria 2013
198 Ga0495613_0009609 3300046689 Bacteria 7184
199 Ga0495613_0019354 3300046689 Bacteria 5074
200 Ga0495624_0002313 3300046690 Bacteria 14509
201 Ga0495624_0002778 3300046690 Bacteria 13141
202 Ga0495589_0000550 3300046794 Bacteria 25890
203 Ga0495589_0045548 3300046794 Bacteria 2179
204 Ga0495600_0000280 3300046809 Bacteria 27638
205 Ga0495600_0061518 3300046809 Bacteria 2452
206 Ga0495581_0000993 3300047315 Bacteria 15264
207 Ga0495604_0004260 3300047317 Bacteria 11326
208 Ga0495604_0034938 3300047317 Bacteria 3972
209 Ga0495674_0003883 3300047319 Bacteria 14514
210 Ga0495674_0007634 3300047319 Bacteria 10329
211 Ga0495672_0072669 3300047320 Bacteria 1942
212 Ga0495676_0002659 3300047321 Bacteria 15992
213 Ga0495680_0003552 3300047322 Bacteria 15283
214 Ga0495680_0010476 3300047322 Bacteria 8272
215 Ga0495680_0020940 3300047322 Bacteria 5484
216 Ga0495683_0010683 3300047323 Bacteria 4846
217 Ga0495675_0000447 3300047444 Bacteria 27413
218 Ga0495675_0034701 3300047444 Bacteria 3220
219 Ga0495679_000304 3300047446 Bacteria 39542
220 Ga0495679_000980 3300047446 Bacteria 17638
221 Ga0495673_0012819 3300047469 Bacteria 4425
222 Ga0495684_0053133 3300047471 Bacteria 3091
223 Ga0495593_0001373 3300047673 Bacteria 14235
224 Ga0495593_0003067 3300047673 Bacteria 10055
225 Ga0495593_0010481 3300047673 Bacteria 5351
226 Ga0495602_0003299 3300048088 Bacteria 16656
227 Ga0495602_0003973 3300048088 Bacteria 15405
228 Ga0495602_0013743 3300048088 Bacteria 8255
229 Ga0495602_0038312 3300048088 Bacteria 4434
230 Ga0495614_0000540 3300048089 Bacteria 15643
231 Ga0496102_0002977 3300048905 Bacteria 14345
232 Ga0496103_0014386 3300048906 Bacteria 4700
233 Ga0496104_0124077 3300048907 Bacteria 2479
234 Ga0496106_0468231 3300048909 Bacteria 1012
235 Ga0496113_0185944 3300048916 Bacteria 1648
236 Ga0496117_0005386 3300048920 Bacteria 13473
237 Ga0496117_0015278 3300048920 Bacteria 6557
238 Ga0496117_0020246 3300048920 Bacteria 5429
239 Ga0496118_0000122 3300048921 Bacteria 137396
240 Ga0496118_0000198 3300048921 Bacteria 105857
241 Ga0496118_0017043 3300048921 Bacteria 6633
242 Ga0496121_0000231 3300048924 Bacteria 119526
243 Ga0496123_0092860 3300048926 Bacteria 1784
244 Ga0496124_0071942 3300048927 Bacteria 2864
245 Ga0496125_0094095 3300048928 Bacteria 2234
246 Ga0496126_0000462 3300048929 Bacteria 80871
247 Ga0496126_0190560 3300048929 Bacteria 1737
248 Ga0495682_0013804 3300049460 Bacteria 3070
249 Ga0501034_0086710 3300049571 Bacteria 3131
250 nmdc:mga0qj67_341766_c1 3300050509 Bacteria 1210
251 Ga0500616_0026486 3300053153 Bacteria 3209

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044684 Ga0466966_0010144 Ga0466966_0010144_1845_2696 275
2 3300044693 Ga0466961_0071404 Ga0466961_0071404_520_1371 275
3 3300046528 Ga0495642_0079368 Ga0495642_0079368_237_1160 286
4 3300047320 Ga0495672_0072669 Ga0495672_0072669_909_1832 286
5 iso_pu_bacteria 2921643360 2921652113 288
6 3300048088 Ga0495602_0038312 Ga0495602_0038312_2693_3616 290
7 iso_pu_bacteria 2510065019 2510136152 295
8 iso_pu_bacteria 2510065045 2510247127 295
9 iso_pu_bacteria 2512047030 2512350927 295
10 iso_pu_bacteria 2512047086 2512530299 295
11 iso_pu_bacteria 2513237162 2514018287 295
12 iso_pu_bacteria 2515075009 2515108921 295
13 iso_pu_bacteria 2515154114 2515640279 295
14 iso_pu_bacteria 2515154122 2515685928 295
15 iso_pu_bacteria 2515154123 2515686996 295
16 iso_pu_bacteria 2524023207 2524453377 295
17 iso_pu_bacteria 2643221723 2644673442 295
18 iso_pu_bacteria 2718217991 2719637852 295
19 iso_pu_bacteria 2718218232 2720610204 295
20 iso_pu_bacteria 2718218235 2720628770 295
21 iso_pu_bacteria 2718218269 2720772719 295
22 iso_pu_bacteria 2721755685 2723569794 295
23 iso_pu_bacteria 2721755819 2724092748 295
24 iso_pu_bacteria 2721755822 2724101341 295
25 iso_pu_bacteria 2721755823 2724113135 295
26 iso_pu_bacteria 2751185846 2753566470 295
27 iso_pu_bacteria 2791355256 2793299143 295
28 iso_pu_bacteria 2791355262 2793333885 295
29 iso_pu_bacteria 2802429605 2805928370 295
30 iso_pu_bacteria 2802429606 2805935182 295
31 iso_pu_bacteria 2818991467 2819717349 295
32 iso_pu_bacteria 2838048938 2838049922 295
33 iso_pu_bacteria 2838061910 2838062190 295
34 iso_pu_bacteria 2838074704 2838077638 295
35 iso_pu_bacteria 2838668709 2838669305 295
36 iso_pu_bacteria 2838701080 2838701677 295
37 iso_pu_bacteria 2842192696 2842195944 295
38 iso_pu_bacteria 2842205361 2842209892 295
39 iso_pu_bacteria 2842250916 2842251899 295
40 iso_pu_bacteria 2842264693 2842264829 295
41 iso_pu_bacteria 2842278818 2842283346 295
42 iso_pu_bacteria 2842311132 2842312972 295
43 iso_pu_bacteria 2842317721 2842320302 295
44 iso_pu_bacteria 2842402390 2842405931 295
45 iso_pu_bacteria 2842409023 2842412515 295
46 iso_pu_bacteria 2842415677 2842419159 295
47 iso_pu_bacteria 2842428310 2842429118 295
48 iso_pu_bacteria 2842434925 2842435731 295
49 iso_pu_bacteria 2842441272 2842441407 295
50 iso_pu_bacteria 2842447887 2842449804 295
51 iso_pu_bacteria 2842462802 2842463544 295
52 iso_pu_bacteria 2842469257 2842470061 295
53 iso_pu_bacteria 2842489311 2842489878 295
54 iso_pu_bacteria 2842495871 2842498077 295
55 iso_pu_bacteria 2874123672 2874128213 295
56 iso_pu_bacteria 2874168670 2874170195 295
57 iso_pu_bacteria 2885270888 2885271772 295
58 iso_pu_bacteria 2900634093 2900642349 295
59 iso_pu_bacteria 2902682994 2902689198 295
60 iso_pu_bacteria 2917699015 2917703774 295
61 iso_pu_bacteria 2920760137 2920763323 295
62 iso_pu_bacteria 3005445848 3005452067 295
63 iso_pu_bacteria 8005289223 8005290863 295
64 iso_pu_bacteria 8005430974 8005436596 295
65 iso_pu_bacteria 8005460587 8005467588 295
66 iso_pu_bacteria 8005556819 8005559503 295
67 iso_pu_bacteria 8005563573 8005566450 295
68 iso_pu_bacteria 8005619151 8005624225 295
69 iso_pu_bacteria 8024479707 8024481460 295
70 iso_pu_bacteria 8024501048 8024504180 295
71 iso_pu_bacteria 8055431914 8055434882 295
72 iso_pu_bacteria 2508501125 2509131860 296
73 iso_pu_bacteria 2512047030 2512352815 296
74 iso_pu_bacteria 2513237151 2513963586 296
75 iso_pu_bacteria 2515154189 2516022138 296
76 iso_pu_bacteria 2738541296 2738824232 296
77 iso_pu_bacteria 2738541298 2738836641 296
78 iso_pu_bacteria 2738541306 2738878172 296
79 iso_pu_bacteria 2738543002 2739189864 296
80 iso_pu_bacteria 2738543008 2739224766 296
81 iso_pu_bacteria 2751185846 2753570697 296
82 iso_pu_bacteria 2863421361 2863422979 296
83 iso_pu_bacteria 2870068957 2870075732 296
84 iso_pu_bacteria 2904564687 2904566818 296
85 iso_pu_bacteria 2904571731 2904574238 296
86 iso_pu_bacteria 2928536128 2928539718 296
87 iso_pu_bacteria 2945934425 2945938296 296
88 iso_pu_bacteria 2990703756 2990708295 296
89 iso_pu_bacteria 641228493 641334373 296
90 iso_pu_bacteria 641736151 642423428 296
91 iso_pu_bacteria 643348555 643391120 296
92 iso_pu_bacteria 8020938398 8020940491 296
93 iso_pu_bacteria 8020945358 8020951128 296
94 iso_pu_bacteria 8020953355 8020955130 296
95 iso_pu_bacteria 8039098773 8039102214 296
96 3300010375 Ga0105239_10414418 Ga0105239_104144181 298
97 3300002987 JGI25159J45721_1000156 JGI25159J45721_10001567 299
98 3300003187 JGI25151J46595_10000063 JGI25151J46595_1000006391 299
99 3300003320 rootH2_10034421 rootH2_1003442113 299
100 3300003322 rootL2_10212920 rootL2_102129201 299
101 3300003323 rootH1_10143903 rootH1_101439033 299
102 3300003354 JGI25160J50197_1000203 JGI25160J50197_100020324 299
103 3300003374 JGI25161J50226_1001580 JGI25161J50226_10015806 299
104 3300003771 Ga0055526_1000192 Ga0055526_100019212 299
105 3300003771 Ga0055526_1000308 Ga0055526_100030826 299
106 3300003771 Ga0055526_1000319 Ga0055526_100031929 299
107 3300003775 Ga0055524_1000031 Ga0055524_1000031176 299
108 3300003775 Ga0055524_1000042 Ga0055524_100004237 299
109 3300003781 Ga0055536_1000640 Ga0055536_100064018 299
110 3300003794 Ga0055531_10007282 Ga0055531_100072827 299
111 3300004625 Ga0055543_1000349 Ga0055543_100034912 299
112 3300005262 Ga0065165_1000672 Ga0065165_100067224 299
113 3300005327 Ga0070658_10001390 Ga0070658_100013905 299
114 3300005366 Ga0070659_100009069 Ga0070659_1000090694 299
115 3300005367 Ga0070667_100311777 Ga0070667_1003117771 299
116 3300005455 Ga0070663_100167837 Ga0070663_1001678372 299
117 3300009177 Ga0105248_10214849 Ga0105248_102148492 299
118 3300009551 Ga0105238_10182946 Ga0105238_101829462 299
119 3300013102 Ga0157371_10005849 Ga0157371_1000584912 299
120 3300013105 Ga0157369_10000059 Ga0157369_1000005910 299
121 3300013250 Ga0171462_1012 Ga0171462_101238 299
122 3300013308 Ga0157375_10016105 Ga0157375_100161055 299
123 3300016635 Ga0183361_10004 Ga0183361_10004168 299
124 3300025208 Ga0209436_102318 Ga0209436_1023186 299
125 3300025273 Ga0209673_1016003 Ga0209673_10160033 299
126 3300025273 Ga0209673_1027137 Ga0209673_10271373 299
127 3300025284 Ga0209130_1000242 Ga0209130_100024243 299
128 3300025291 Ga0209675_1000939 Ga0209675_10009397 299
129 3300025291 Ga0209675_1001206 Ga0209675_100120614 299
130 3300025292 Ga0209676_1001712 Ga0209676_10017123 299
131 3300025294 Ga0209025_1000014 Ga0209025_1000014482 299
132 3300025294 Ga0209025_1000240 Ga0209025_1000240136 299
133 3300025294 Ga0209025_1004942 Ga0209025_10049426 299
134 3300025295 Ga0209564_1000017 Ga0209564_1000017432 299
135 3300025295 Ga0209564_1000077 Ga0209564_1000077230 299
136 3300025295 Ga0209564_1000135 Ga0209564_100013515 299
137 3300025295 Ga0209564_1000338 Ga0209564_100033866 299
138 3300025299 Ga0209256_1000057 Ga0209256_1000057230 299
139 3300025299 Ga0209256_1000107 Ga0209256_100010714 299
140 3300025299 Ga0209256_1001843 Ga0209256_100184315 299
141 3300025302 Ga0207426_1000483 Ga0207426_100048337 299
142 3300025303 Ga0209051_1007193 Ga0209051_10071936 299
143 3300025304 Ga0209257_1003985 Ga0209257_10039857 299
144 3300025909 Ga0207705_10000337 Ga0207705_1000033725 299
145 3300025932 Ga0207690_10005736 Ga0207690_100057364 299
146 3300025941 Ga0207711_10099577 Ga0207711_100995772 299
147 3300025949 Ga0207667_10014170 Ga0207667_100141704 299
148 3300037418 Ga0395900_0000098 Ga0395900_0000098_152890_153813 299
149 3300037418 Ga0395900_0062173 Ga0395900_0062173_1138_2061 299
150 3300037471 Ga0395905_0000035 Ga0395905_0000035_252834_253757 299
151 3300038443 Ga0395901_0000129 Ga0395901_0000129_91976_92899 299
152 3300044656 Ga0466969_0001503 Ga0466969_0001503_11147_12079 299
153 3300044656 Ga0466969_0053600 Ga0466969_0053600_182_1105 299
154 3300044684 Ga0466966_0011367 Ga0466966_0011367_4050_4973 299
155 3300044684 Ga0466966_0046770 Ga0466966_0046770_477_1409 299
156 3300044693 Ga0466961_0010247 Ga0466961_0010247_4859_5782 299
157 3300044693 Ga0466961_0019531 Ga0466961_0019531_3091_4023 299
158 3300044706 Ga0466964_0008555 Ga0466964_0008555_1052_1975 299
159 3300044765 Ga0466970_0027036 Ga0466970_0027036_774_1697 299
160 3300044842 Ga0466957_0037039 Ga0466957_0037039_1103_2026 299
161 3300045049 Ga0466959_0002997 Ga0466959_0002997_1698_2630 299
162 3300045049 Ga0466959_0079241 Ga0466959_0079241_977_1900 299
163 3300045836 Ga0466958_0009537 Ga0466958_0009537_1048_1971 299
164 3300046454 Ga0495592_0005006 Ga0495592_0005006_7029_7952 299
165 3300046458 Ga0495591_000688 Ga0495591_000688_22835_23758 299
166 3300046459 Ga0495629_0022427 Ga0495629_0022427_1788_2711 299
167 3300046459 Ga0495629_0035715 Ga0495629_0035715_80_1003 299
168 3300046461 Ga0495641_0041493 Ga0495641_0041493_207_1130 299
169 3300046462 Ga0495651_0003132 Ga0495651_0003132_1161_2084 299
170 3300046463 Ga0495653_0004334 Ga0495653_0004334_5219_6142 299
171 3300046472 Ga0495580_0001693 Ga0495580_0001693_13286_14209 299
172 3300046472 Ga0495580_0003497 Ga0495580_0003497_10918_11841 299
173 3300046473 Ga0495582_0000835 Ga0495582_0000835_14752_15675 299
174 3300046476 Ga0495662_0013798 Ga0495662_0013798_1066_1989 299
175 3300046477 Ga0495664_0000543 Ga0495664_0000543_4705_5628 299
176 3300046499 Ga0495594_0018064 Ga0495594_0018064_782_1705 299
177 3300046500 Ga0495596_0000361 Ga0495596_0000361_25670_26593 299
178 3300046500 Ga0495596_0036790 Ga0495596_0036790_814_1737 299
179 3300046501 Ga0495607_0099591 Ga0495607_0099591_450_1376 299
180 3300046501 Ga0495607_0144473 Ga0495607_0144473_238_1161 299
181 3300046511 Ga0495608_0007194 Ga0495608_0007194_158_1081 299
182 3300046514 Ga0495618_0006415 Ga0495618_0006415_1692_2615 299
183 3300046514 Ga0495618_0045465 Ga0495618_0045465_886_1809 299
184 3300046516 Ga0495628_0007378 Ga0495628_0007378_6791_7714 299
185 3300046516 Ga0495628_0021471 Ga0495628_0021471_1605_2528 299
186 3300046517 Ga0495630_0002157 Ga0495630_0002157_10926_11849 299
187 3300046517 Ga0495630_0026155 Ga0495630_0026155_1436_2359 299
188 3300046518 Ga0495631_0038618 Ga0495631_0038618_584_1507 299
189 3300046524 Ga0495648_0002513 Ga0495648_0002513_13264_14187 299
190 3300046524 Ga0495648_0004471 Ga0495648_0004471_6169_7092 299
191 3300046524 Ga0495648_0008517 Ga0495648_0008517_4868_5791 299
192 3300046526 Ga0495666_0000847 Ga0495666_0000847_2589_3512 299
193 3300046526 Ga0495666_0011681 Ga0495666_0011681_1720_2643 299
194 3300046529 Ga0495652_0003824 Ga0495652_0003824_10641_11564 299
195 3300046531 Ga0495665_0018923 Ga0495665_0018923_1716_2639 299
196 3300046533 Ga0495640_0000889 Ga0495640_0000889_872_1795 299
197 3300046533 Ga0495640_0056573 Ga0495640_0056573_895_1818 299
198 3300046536 Ga0495587_0000944 Ga0495587_0000944_4985_5908 299
199 3300046536 Ga0495587_0022542 Ga0495587_0022542_1751_2674 299
200 3300046543 Ga0495645_0003353 Ga0495645_0003353_7203_8126 299
201 3300046559 Ga0495667_0197272 Ga0495667_0197272_207_1130 299
202 3300046642 Ga0495634_0001994 Ga0495634_0001994_11621_12544 299
203 3300046648 Ga0495611_0028157 Ga0495611_0028157_936_1859 299
204 3300046663 Ga0495635_0018295 Ga0495635_0018295_1651_2574 299
205 3300046663 Ga0495635_0094533 Ga0495635_0094533_1038_1961 299
206 3300046665 Ga0495661_0012959 Ga0495661_0012959_1560_2483 299
207 3300046678 Ga0495599_0028969 Ga0495599_0028969_2248_3171 299
208 3300046678 Ga0495599_0034022 Ga0495599_0034022_1267_2190 299
209 3300046679 Ga0495623_0042284 Ga0495623_0042284_976_1899 299
210 3300046680 Ga0495646_0001168 Ga0495646_0001168_1924_2847 299
211 3300046680 Ga0495646_0001924 Ga0495646_0001924_3133_4056 299
212 3300046689 Ga0495613_0009609 Ga0495613_0009609_1617_2540 299
213 3300046689 Ga0495613_0019354 Ga0495613_0019354_1140_2063 299
214 3300046690 Ga0495624_0002313 Ga0495624_0002313_11782_12705 299
215 3300046794 Ga0495589_0000550 Ga0495589_0000550_15118_16041 299
216 3300046809 Ga0495600_0000280 Ga0495600_0000280_7433_8356 299
217 3300046809 Ga0495600_0061518 Ga0495600_0061518_662_1585 299
218 3300047315 Ga0495581_0000993 Ga0495581_0000993_12275_13198 299
219 3300047317 Ga0495604_0034938 Ga0495604_0034938_1796_2719 299
220 3300047319 Ga0495674_0003883 Ga0495674_0003883_4848_5771 299
221 3300047319 Ga0495674_0007634 Ga0495674_0007634_2222_3145 299
222 3300047321 Ga0495676_0002659 Ga0495676_0002659_1412_2335 299
223 3300047322 Ga0495680_0003552 Ga0495680_0003552_11228_12151 299
224 3300047322 Ga0495680_0010476 Ga0495680_0010476_3044_3967 299
225 3300047323 Ga0495683_0010683 Ga0495683_0010683_1220_2143 299
226 3300047444 Ga0495675_0000447 Ga0495675_0000447_11406_12329 299
227 3300047444 Ga0495675_0034701 Ga0495675_0034701_1005_1928 299
228 3300047446 Ga0495679_000304 Ga0495679_000304_38422_39345 299
229 3300047446 Ga0495679_000980 Ga0495679_000980_13583_14506 299
230 3300047469 Ga0495673_0012819 Ga0495673_0012819_2651_3574 299
231 3300047471 Ga0495684_0053133 Ga0495684_0053133_1156_2079 299
232 3300047673 Ga0495593_0001373 Ga0495593_0001373_10386_11309 299
233 3300047673 Ga0495593_0010481 Ga0495593_0010481_1197_2120 299
234 3300048088 Ga0495602_0003973 Ga0495602_0003973_4848_5771 299
235 3300048088 Ga0495602_0013743 Ga0495602_0013743_3027_3950 299
236 3300048089 Ga0495614_0000540 Ga0495614_0000540_11420_12343 299
237 3300048905 Ga0496102_0002977 Ga0496102_0002977_8811_9734 299
238 3300048906 Ga0496103_0014386 Ga0496103_0014386_846_1769 299
239 3300048909 Ga0496106_0468231 Ga0496106_0468231_42_968 299
240 3300048916 Ga0496113_0185944 Ga0496113_0185944_307_1230 299
241 3300048920 Ga0496117_0020246 Ga0496117_0020246_3674_4597 299
242 3300048921 Ga0496118_0000198 Ga0496118_0000198_60185_61108 299
243 3300048924 Ga0496121_0000231 Ga0496121_0000231_73531_74454 299
244 3300048928 Ga0496125_0094095 Ga0496125_0094095_549_1472 299
245 3300048929 Ga0496126_0000462 Ga0496126_0000462_61105_62028 299
246 3300048929 Ga0496126_0190560 Ga0496126_0190560_214_1137 299
247 3300049460 Ga0495682_0013804 Ga0495682_0013804_880_1803 299
248 3300049571 Ga0501034_0086710 Ga0501034_0086710_650_1573 299
249 3300001979 JGI24740J21852_10001309 JGI24740J21852_1000130910 300
250 3300001989 JGI24739J22299_10027262 JGI24739J22299_100272622 300
251 3300002075 JGI24738J21930_10010184 JGI24738J21930_100101842 300
252 3300003322 rootL2_10126884 rootL2_101268842 300
253 3300003323 rootH1_10327076 rootH1_103270762 300
254 3300003323 rootH1_10369758 rootH1_103697582 300
255 3300003758 Ga0055532_1000661 Ga0055532_10006614 300
256 3300003761 Ga0055535_1000251 Ga0055535_10002517 300
257 3300003762 Ga0055542_1000280 Ga0055542_10002807 300
258 3300003763 Ga0055529_1000213 Ga0055529_10002137 300
259 3300003790 Ga0055528_1005566 Ga0055528_10055662 300
260 3300005329 Ga0070683_100205823 Ga0070683_1002058232 300
261 3300005353 Ga0070669_100122110 Ga0070669_1001221102 300
262 3300005436 Ga0070713_100029545 Ga0070713_1000295453 300
263 3300005614 Ga0068856_100082168 Ga0068856_1000821682 300
264 3300005841 Ga0068863_100000752 Ga0068863_10000075220 300
265 3300005843 Ga0068860_100000719 Ga0068860_1000007198 300
266 3300005843 Ga0068860_100131407 Ga0068860_1001314072 300
267 3300005844 Ga0068862_100000044 Ga0068862_100000044129 300
268 3300005844 Ga0068862_100002584 Ga0068862_1000025847 300
269 3300006028 Ga0070717_10046082 Ga0070717_100460822 300
270 3300006186 Ga0075369_10061526 Ga0075369_100615262 300
271 3300006931 Ga0097620_100468649 Ga0097620_1004686492 300
272 3300009093 Ga0105240_10001481 Ga0105240_1000148125 300
273 3300009093 Ga0105240_10080441 Ga0105240_100804413 300
274 3300009545 Ga0105237_10203633 Ga0105237_102036332 300
275 3300009553 Ga0105249_10000045 Ga0105249_1000004563 300
276 3300013102 Ga0157371_10024006 Ga0157371_100240063 300
277 3300013105 Ga0157369_10023634 Ga0157369_100236343 300
278 3300013105 Ga0157369_10211568 Ga0157369_102115682 300
279 3300013307 Ga0157372_10292568 Ga0157372_102925682 300
280 3300025228 Ga0209672_100044 Ga0209672_10004481 300
281 3300025228 Ga0209672_100120 Ga0209672_10012081 300
282 3300025229 Ga0209147_100039 Ga0209147_10003981 300
283 3300025242 Ga0209258_100062 Ga0209258_10006281 300
284 3300025254 Ga0209148_1000075 Ga0209148_100007581 300
285 3300025272 Ga0209455_1000067 Ga0209455_100006781 300
286 3300025273 Ga0209673_1000044 Ga0209673_1000044181 300
287 3300025295 Ga0209564_1005098 Ga0209564_10050982 300
288 3300025295 Ga0209564_1023591 Ga0209564_10235912 300
289 3300025904 Ga0207647_10085006 Ga0207647_100850062 300
290 3300025913 Ga0207695_10001460 Ga0207695_1000146025 300
291 3300025919 Ga0207657_10170564 Ga0207657_101705642 300
292 3300025928 Ga0207700_10036092 Ga0207700_100360923 300
293 3300025972 Ga0207668_10001115 Ga0207668_1000111510 300
294 3300025981 Ga0207640_10000432 Ga0207640_1000043225 300
295 3300026067 Ga0207678_10031763 Ga0207678_100317631 300
296 3300026078 Ga0207702_10004000 Ga0207702_1000400011 300
297 3300026088 Ga0207641_10001337 Ga0207641_1000133724 300
298 3300027312 Ga0209371_1000782 Ga0209371_10007828 300
299 3300027876 Ga0209974_10002555 Ga0209974_100025553 300
300 3300028380 Ga0268265_10000045 Ga0268265_1000004557 300
301 3300028380 Ga0268265_10150838 Ga0268265_101508382 300
302 3300028381 Ga0268264_10000524 Ga0268264_100005244 300
303 3300030500 Ga0268256_1000658 Ga0268256_100065819 300
304 3300031456 Ga0307513_10034719 Ga0307513_100347194 300
305 3300031824 Ga0307413_10029723 Ga0307413_100297232 300
306 3300031911 Ga0307412_10000002 Ga0307412_10000002631 300
307 3300031995 Ga0307409_100290564 Ga0307409_1002905641 300
308 3300032002 Ga0307416_100018668 Ga0307416_1000186682 300
309 3300032004 Ga0307414_10020677 Ga0307414_100206774 300
310 3300032004 Ga0307414_10076298 Ga0307414_100762981 300
311 3300037418 Ga0395900_0017753 Ga0395900_0017753_6316_7242 300
312 3300037471 Ga0395905_0032466 Ga0395905_0032466_3640_4566 300
313 3300046459 Ga0495629_0029184 Ga0495629_0029184_1263_2189 300
314 3300046463 Ga0495653_0002024 Ga0495653_0002024_13359_14285 300
315 3300046471 Ga0495650_0007612 Ga0495650_0007612_3935_4861 300
316 3300046500 Ga0495596_0025598 Ga0495596_0025598_835_1761 300
317 3300046507 Ga0495606_0057500 Ga0495606_0057500_1193_2119 300
318 3300046512 Ga0495610_0005481 Ga0495610_0005481_5707_6633 300
319 3300046512 Ga0495610_0112062 Ga0495610_0112062_136_1062 300
320 3300046528 Ga0495642_0009754 Ga0495642_0009754_1069_1995 300
321 3300046529 Ga0495652_0005525 Ga0495652_0005525_4968_5894 300
322 3300046531 Ga0495665_0000864 Ga0495665_0000864_13372_14298 300
323 3300046663 Ga0495635_0006493 Ga0495635_0006493_5958_6884 300
324 3300046679 Ga0495623_0108462 Ga0495623_0108462_209_1135 300
325 3300046680 Ga0495646_0024505 Ga0495646_0024505_2451_3377 300
326 3300046684 Ga0495669_0042881 Ga0495669_0042881_566_1492 300
327 3300046690 Ga0495624_0002778 Ga0495624_0002778_9859_10785 300
328 3300046794 Ga0495589_0045548 Ga0495589_0045548_373_1299 300
329 3300047317 Ga0495604_0004260 Ga0495604_0004260_2418_3344 300
330 3300047322 Ga0495680_0020940 Ga0495680_0020940_35_961 300
331 3300047673 Ga0495593_0003067 Ga0495593_0003067_6019_6945 300
332 3300048088 Ga0495602_0003299 Ga0495602_0003299_6589_7515 300
333 3300048907 Ga0496104_0124077 Ga0496104_0124077_1341_2267 300
334 3300048920 Ga0496117_0005386 Ga0496117_0005386_7471_8397 300
335 3300048920 Ga0496117_0015278 Ga0496117_0015278_5560_6486 300
336 3300048921 Ga0496118_0000122 Ga0496118_0000122_72234_73160 300
337 3300048921 Ga0496118_0017043 Ga0496118_0017043_5636_6562 300
338 3300048926 Ga0496123_0092860 Ga0496123_0092860_697_1623 300
339 3300048927 Ga0496124_0071942 Ga0496124_0071942_1902_2828 300
340 3300050509 nmdc:mga0qj67_341766_c1 nmdc:mga0qj67_341766_c1_166_1092 300
341 3300053153 Ga0500616_0026486 Ga0500616_0026486_1342_2268 300
342 iso_pu_bacteria 2775506901 2776265198 300
343 iso_pu_bacteria 2919138771 2919140019 300

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

166

339

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5unn-assembly1.cif.gz_B crystal structure of nadph-dependent glyoxylate/hydroxypyruvate reductase smc02828 (smghra) from sinorhizobium meliloti in apo form 0.931 87 269
5vg6-assembly5.cif.gz_G crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase from xanthobacter autotrophicus py2 in complex with nadph and mes. 0.9265 77 300
4n18-assembly1.cif.gz_A-2 crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase family protein from klebsiella pneumoniae 342 0.9161 1 297
5bqf-assembly1.cif.gz_A probable 2-hydroxyacid dehydrogenase from rhizobium etli cfn 42 in complex with nadp, hepes and l(+)-tartaric acid 0.9079 2 300
4zqb-assembly1.cif.gz_B crystal structure of nadp-dependent dehydrogenase from rhodobactersphaeroides in complex with nadp and sulfate 0.9046 2 300
ID Description Score Start End Superfamily
af_P75913_105_277_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9486 104 263 3.30.420.40
4n18A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9449 95 264 3.40.50.720
5vg6D02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9407 93 266 3.40.50.720
4weqA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9209 93 266 3.40.50.720
5vg6D02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9101 93 266 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2X3H7M6-F1-model_v4 2-hydroxyacid dehydrogenase YcdW (EC 1.1.1.79) 0.961 116 262 GO:0030267
GO:0051287
AF-A0A377ZXH8-F1-model_v4 2-hydroxyacid dehydrogenase YcdW (EC 1.1.1.79) 0.9601 97 262 GO:0030267
GO:0051287
AF-A0A3P8K987-F1-model_v4 Glyoxylate/hydroxypyruvate reductase A (EC 1.1.1.79) 0.9519 86 300 GO:0005829
GO:0030267
GO:0051287
AF-A0A0Q8CBJ0-F1-model_v4 deleted 0.9487 96 300
AF-A0A7W8LF76-F1-model_v4 Glyoxylate/hydroxypyruvate reductase A (EC 1.1.1.79, EC 1.1.1.81) 0.944 59 300 GO:0016618
GO:0030267
GO:0051287

Feature Viewer

pLDDT pTM Quality
88.97 0.81 High
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Predicted Structure (AlphaFold2)

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Map