F415105

General Info

Members Datasets Scaffolds Average Seq Length
342 199 684 330

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100092336|Ga0070712_1000923362
Length 356
Sequence MTHASAEGPCRTVAAPPPRPSTRGPREWARAFTGFYPPLAEDLANLDPVARFLYSARSVILVISFQAALLAGLLAATDRRFSTVPFVLVLIGYVVLHAISNLSNDYFGARRGHDTDDSPRRRYTVHPLLSGAVTSRLLLTGILVLVAIAAAIGVYFIALRGWPAVALIALGALLLWAYDAAPRALKELGLGEVAAFIVWGPLMIAGGYYVISGVRSPAALLASLPYGLGVMSILVGKHIDQRDFDERKHQRTLPVVLGERRARALNRASVIAMYVVIAIGILLGALTPFALLVLIAAPRAWRAVRVMSVPAPAEPPAGYVGWPLWYHRVCLVHNRAFGWLYVAGLAIGAVFPAIRV

Samples

Sample ID Description Type Environment
1 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 2209111006 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0 v1 Metagenome Rhizosphere
4 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
5 3300000042 Arabidopsis rhizosphere soil microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil young Metagenome Rhizosphere
6 3300000043 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere Metagenome Rhizosphere
7 3300000044 Arabidopsis rhizosphere microbial communities from the University of North Carolina, USA - sample from Arabidopsis soil old Metagenome Rhizosphere
8 3300000045 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis Col-0 old rhizosphere Metagenome Rhizosphere
9 3300000652 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA Metagenome Rhizosphere
10 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
11 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
12 3300005276 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5 v1 Metagenome Rhizosphere
13 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
14 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
34 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
94 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
95 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
96 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
97 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
98 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
99 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
100 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
101 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
102 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
103 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
104 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
105 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
106 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
107 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
108 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
109 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
110 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
111 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
112 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
115 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
116 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
117 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
118 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
119 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
120 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
121 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
122 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
123 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
127 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
128 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
129 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
130 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
131 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
132 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
133 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
134 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
135 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
136 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
137 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
138 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
139 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
140 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
141 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
145 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
146 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
147 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
148 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
149 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
150 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
151 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
152 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
153 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
154 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
155 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
156 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
157 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
158 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
159 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
160 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
161 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
162 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
163 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
166 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
167 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
168 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
169 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
170 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
171 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
172 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
173 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
174 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
175 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
176 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
177 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
188 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
189 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
190 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
194 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
195 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
196 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
197 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
198 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
199 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.12
Metatranscriptomes 0.88
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.51
Rhizosphere 95.61
Stem 0
Stem Tuber 0
Unclassified 3.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070712_100092336 3300006175 Bacteria 2220
2 MBSR1b_contig_2218305 2162886012 Bacteria 2611
3 2214656047 2209111006 Bacteria 4864
4 ARcpr5oldR_c000077 3300000041 Bacteria 17823
5 ARSoilYngRDRAFT_c00139 3300000042 Bacteria 12387
6 ARcpr5yngRDRAFT_c000059 3300000043 Bacteria 17813
7 ARSoilOldRDRAFT_c000025 3300000044 Bacteria 33995
8 ARCol0oldRDRAFT_c00088 3300000045 Bacteria 7939
9 ARCol0yngRDRAFT_1000013 3300000652 Bacteria 39272
10 JGI24737J22298_10009129 3300001990 Bacteria 3305
11 JGI24735J21928_10011820 3300002067 Bacteria 2764
12 Ga0065717_1001942 3300005276 Bacteria 6187
13 Ga0065712_10080341 3300005290 Bacteria 3117
14 Ga0065715_10091869 3300005293 Bacteria 5494
15 Ga0070658_10006976 3300005327 Bacteria 9125
16 Ga0070658_10057323 3300005327 Bacteria 3168
17 Ga0070658_10116206 3300005327 Bacteria 2220
18 Ga0070683_100008458 3300005329 Bacteria 8742
19 Ga0070683_100015504 3300005329 Bacteria 6697
20 Ga0070683_100030522 3300005329 Bacteria 4895
21 Ga0070683_100059034 3300005329 Bacteria 3564
22 Ga0070683_100123716 3300005329 Bacteria 2444
23 Ga0070680_100008874 3300005336 Bacteria 7706
24 Ga0070680_100009900 3300005336 Bacteria 7339
25 Ga0070680_100016781 3300005336 Bacteria 5762
26 Ga0070680_100066217 3300005336 Bacteria 2962
27 Ga0070660_100017501 3300005339 Bacteria 5226
28 Ga0070660_100018397 3300005339 Bacteria 5106
29 Ga0070660_100207463 3300005339 Bacteria 1590
30 Ga0070661_100008981 3300005344 Bacteria 6916
31 Ga0070661_100044386 3300005344 Bacteria 3248
32 Ga0070668_100079129 3300005347 Bacteria 2573
33 Ga0070669_100248619 3300005353 Bacteria 1415
34 Ga0070674_100227405 3300005356 Bacteria 1454
35 Ga0070659_100044289 3300005366 Bacteria 3483
36 Ga0070659_100074445 3300005366 Bacteria 2705
37 Ga0070714_100000029 3300005435 Bacteria 137953
38 Ga0070714_100024042 3300005435 Bacteria 5012
39 Ga0070713_100131981 3300005436 Bacteria 2203
40 Ga0070711_100015592 3300005439 Unclassified 4811
41 Ga0070700_100000033 3300005441 Bacteria 114863
42 Ga0070694_100057599 3300005444 Bacteria 2642
43 Ga0070708_100331874 3300005445 Bacteria 1433
44 Ga0070663_100004734 3300005455 Bacteria 8027
45 Ga0070681_10002456 3300005458 Bacteria 16978
46 Ga0070681_10010230 3300005458 Bacteria 9254
47 Ga0070706_100029117 3300005467 Bacteria 5088
48 Ga0070707_100010946 3300005468 Bacteria 8448
49 Ga0070707_100042004 3300005468 Bacteria 4378
50 Ga0070698_100008527 3300005471 Bacteria 11064
51 Ga0070679_100003476 3300005530 Bacteria 14425
52 Ga0070679_100005483 3300005530 Bacteria 11760
53 Ga0070679_100029420 3300005530 Bacteria 5420
54 Ga0070679_100102061 3300005530 Unclassified 2855
55 Ga0070679_100183843 3300005530 Bacteria 2062
56 Ga0070684_100003733 3300005535 Bacteria 11486
57 Ga0070684_100007991 3300005535 Bacteria 8258
58 Ga0070684_100009951 3300005535 Bacteria 7517
59 Ga0070684_100106340 3300005535 Bacteria 2512
60 Ga0070684_100367498 3300005535 Bacteria 1324
61 Ga0070697_100285619 3300005536 Bacteria 1416
62 Ga0068853_100022679 3300005539 Bacteria 5247
63 Ga0070696_100003597 3300005546 Bacteria 10319
64 Ga0070704_100018756 3300005549 Bacteria 4432
65 Ga0068855_100007750 3300005563 Bacteria 12967
66 Ga0068855_100015197 3300005563 Bacteria 9270
67 Ga0068855_100073440 3300005563 Bacteria 3974
68 Ga0068855_100105337 3300005563 Bacteria 3243
69 Ga0068854_100008749 3300005578 Bacteria 6518
70 Ga0068856_100027031 3300005614 Bacteria 5598
71 Ga0068856_100122010 3300005614 Bacteria 2608
72 Ga0068852_100249901 3300005616 Bacteria 1699
73 Ga0068859_100304046 3300005617 Bacteria 1688
74 Ga0068862_100012458 3300005844 Bacteria 7037
75 Ga0081455_10006889 3300005937 Bacteria 12095
76 Ga0070712_100036297 3300006175 Unclassified 3353
77 Ga0075434_100022418 3300006871 Bacteria 6151
78 Ga0097620_100304066 3300006931 Bacteria 1688
79 Ga0105240_10001127 3300009093 Bacteria 46930
80 Ga0105240_10480544 3300009093 Bacteria 1385
81 Ga0111539_10007375 3300009094 Bacteria 14089
82 Ga0105241_10038237 3300009174 Bacteria 3617
83 Ga0105241_10183372 3300009174 Bacteria 1738
84 Ga0105238_10313933 3300009551 Bacteria 1553
85 Ga0105249_10013911 3300009553 Bacteria 7113
86 Ga0105239_10074948 3300010375 Bacteria 3721
87 Ga0157371_10014150 3300013102 Bacteria 6032
88 Ga0157370_10001801 3300013104 Bacteria 26425
89 Ga0157370_10050590 3300013104 Bacteria 3971
90 Ga0157369_10069733 3300013105 Unclassified 3776
91 Ga0157374_10222373 3300013296 Bacteria 1853
92 Ga0157378_10182037 3300013297 Bacteria 1977
93 Ga0157372_10000004 3300013307 Bacteria 435659
94 Ga0157372_10009424 3300013307 Bacteria 10389
95 Ga0157372_10010791 3300013307 Bacteria 9726
96 Ga0157372_10037956 3300013307 Bacteria 5316
97 Ga0157372_10289098 3300013307 Bacteria 1906
98 Ga0157377_10079158 3300014745 Bacteria 1917
99 Ga0206353_10242963 3300020082 Bacteria 3810
100 Ga0206353_10272634 3300020082 Bacteria 2614
101 Ga0206353_11034235 3300020082 Bacteria 2499
102 Ga0213875_10052022 3300021388 Bacteria 1918
103 Ga0207647_10148357 3300025904 Bacteria 1372
104 Ga0207705_10001819 3300025909 Bacteria 16800
105 Ga0207705_10015910 3300025909 Bacteria 5400
106 Ga0207705_10034472 3300025909 Unclassified 3619
107 Ga0207684_10020534 3300025910 Bacteria 5644
108 Ga0207654_10102268 3300025911 Bacteria 1767
109 Ga0207707_10001250 3300025912 Bacteria 23824
110 Ga0207707_10003135 3300025912 Bacteria 14682
111 Ga0207707_10016348 3300025912 Bacteria 6472
112 Ga0207695_10019737 3300025913 Bacteria 7750
113 Ga0207695_10023734 3300025913 Bacteria 6921
114 Ga0207695_10055088 3300025913 Bacteria 4147
115 Ga0207671_10093636 3300025914 Bacteria 2266
116 Ga0207663_10005588 3300025916 Bacteria 6348
117 Ga0207660_10004817 3300025917 Bacteria 8780
118 Ga0207660_10042585 3300025917 Bacteria 3188
119 Ga0207657_10020115 3300025919 Bacteria 6317
120 Ga0207657_10027334 3300025919 Bacteria 5226
121 Ga0207649_10194277 3300025920 Bacteria 1429
122 Ga0207652_10059422 3300025921 Unclassified 3295
123 Ga0207652_10069143 3300025921 Bacteria 3065
124 Ga0207652_10079591 3300025921 Bacteria 2863
125 Ga0207652_10122478 3300025921 Bacteria 2314
126 Ga0207646_10319426 3300025922 Bacteria 1403
127 Ga0207700_10124420 3300025928 Bacteria 2095
128 Ga0207700_10241161 3300025928 Bacteria 1541
129 Ga0207664_10000028 3300025929 Bacteria 188245
130 Ga0207664_10084948 3300025929 Bacteria 2582
131 Ga0207690_10028996 3300025932 Bacteria 3514
132 Ga0207669_10242370 3300025937 Bacteria 1337
133 Ga0207704_10059972 3300025938 Bacteria 2352
134 Ga0207661_10004060 3300025944 Bacteria 10222
135 Ga0207661_10007760 3300025944 Bacteria 7642
136 Ga0207661_10054834 3300025944 Bacteria 3195
137 Ga0207661_10068561 3300025944 Bacteria 2889
138 Ga0207661_10144481 3300025944 Bacteria 2051
139 Ga0207661_10201107 3300025944 Bacteria 1751
140 Ga0207661_10264758 3300025944 Bacteria 1532
141 Ga0207667_10028306 3300025949 Bacteria 6088
142 Ga0207667_10049011 3300025949 Bacteria 4463
143 Ga0207667_10076216 3300025949 Bacteria 3481
144 Ga0207667_10165544 3300025949 Bacteria 2273
145 Ga0207640_10055731 3300025981 Bacteria 2591
146 Ga0207639_10030716 3300026041 Bacteria 3942
147 Ga0207678_10017923 3300026067 Bacteria 6219
148 Ga0207678_10033267 3300026067 Bacteria 4493
149 Ga0207708_10000004 3300026075 Bacteria 293087
150 Ga0207702_10084336 3300026078 Bacteria 2766
151 Ga0207674_10471748 3300026116 Bacteria 1213
152 Ga0207428_10000695 3300027907 Bacteria 39125
153 Ga0268265_10010413 3300028380 Bacteria 6281
154 Ga0265325_10000111 3300031241 Bacteria 56612
155 Ga0265313_10007120 3300031595 Bacteria 7712
156 Ga0316575_10029336 3300031665 Bacteria 2148
157 Ga0316579_10030846 3300031691 Bacteria 2451
158 Ga0373930_0001854 3300034816 Bacteria 3218
159 Ga0373948_0000192 3300034817 Bacteria 7024
160 Ga0373958_0003524 3300034819 Bacteria 2261
161 Ga0373959_0001523 3300034820 Bacteria 3695
162 Ga0373938_0000120 3300034957 Bacteria 10984
163 Ga0373928_0000303 3300035084 Bacteria 9827
164 Ga0373929_0000151 3300035085 Bacteria 12075
165 Ga0373940_0000287 3300035088 Bacteria 7288
166 Ga0373949_0001554 3300035090 Bacteria 6492
167 Ga0373951_0001032 3300035091 Bacteria 7494
168 Ga0373952_0000010 3300035092 Bacteria 25839
169 Ga0373932_0000145 3300035112 Bacteria 20154
170 Ga0373939_0000846 3300035114 Bacteria 7579
171 Ga0373941_0000539 3300035115 Bacteria 7548
172 Ga0373953_0007865 3300035117 Bacteria 3593
173 Ga0373954_0002477 3300035118 Bacteria 7750
174 Ga0373954_0071203 3300035118 Bacteria 1652
175 Ga0373956_0000163 3300035119 Bacteria 24741
176 Ga0373957_0002054 3300035120 Bacteria 5643
177 Ga0373957_0006070 3300035120 Bacteria 3784
178 Ga0373960_0000020 3300035121 Bacteria 20266
179 Ga0373955_0004018 3300035172 Bacteria 6491
180 Ga0373955_0045321 3300035172 Bacteria 2373
181 Ga0373955_0067826 3300035172 Bacteria 1986
182 Ga0373955_0090352 3300035172 Bacteria 1744
183 Ga0373942_0000340 3300035207 Bacteria 12712
184 Ga0373961_0000443 3300035241 Bacteria 16855
185 Ga0373962_0000220 3300035242 Bacteria 12046
186 Ga0373924_0059710 3300035410 Unclassified 1593
187 Ga0373931_0001711 3300035691 Bacteria 9513
188 Ga0373935_0127208 3300035692 Unclassified 1708
189 Ga0373933_0004043 3300035724 Bacteria 8082
190 Ga0373933_0016193 3300035724 Bacteria 4166
191 Ga0373937_0002769 3300036401 Bacteria 14632
192 Ga0373937_0023453 3300036401 Bacteria 5555
193 Ga0373937_0317382 3300036401 Bacteria 1474
194 Ga0373937_0414865 3300036401 Bacteria 1277
195 Ga0373925_0007331 3300037068 Bacteria 8053
196 Ga0436364_1054482 3300037853 Bacteria 4929
197 Ga0436364_1279811 3300037853 Bacteria 1807
198 Ga0242420_002359 3300038996 Bacteria 2684
199 Ga0451577_0017811 3300042876 Bacteria 6554
200 Ga0451577_0517856 3300042876 Unclassified 1083
201 Ga0466972_0012214 3300044658 Bacteria 4317
202 Ga0466972_0101664 3300044658 Bacteria 1360
203 Ga0453683_0043557 3300044673 Bacteria 2816
204 Ga0466965_0119606 3300044683 Bacteria 1359
205 Ga0466966_0024051 3300044684 Bacteria 3987
206 Ga0466961_0010279 3300044693 Bacteria 5964
207 Ga0466961_0015870 3300044693 Bacteria 4833
208 Ga0466961_0036793 3300044693 Bacteria 3141
209 Ga0466961_0110853 3300044693 Bacteria 1727
210 Ga0466961_0163388 3300044693 Bacteria 1387
211 Ga0466961_0212338 3300044693 Bacteria 1194
212 Ga0466963_0004882 3300044694 Bacteria 7818
213 Ga0466963_0005935 3300044694 Bacteria 7190
214 Ga0466963_0007716 3300044694 Bacteria 6430
215 Ga0466963_0035767 3300044694 Bacteria 3236
216 Ga0466963_0046822 3300044694 Bacteria 2853
217 Ga0466963_0052806 3300044694 Bacteria 2697
218 Ga0466963_0097619 3300044694 Bacteria 2007
219 Ga0466963_0123799 3300044694 Bacteria 1781
220 Ga0466963_0139767 3300044694 Bacteria 1677
221 Ga0466964_0008860 3300044706 Bacteria 3782
222 Ga0466964_0032117 3300044706 Bacteria 2085
223 Ga0453684_0112726 3300044712 Bacteria 3301
224 Ga0466971_0024938 3300044719 Bacteria 2670
225 Ga0466971_0061886 3300044719 Bacteria 1693
226 Ga0466968_0127871 3300044735 Bacteria 1154
227 Ga0466970_0024760 3300044765 Bacteria 3139
228 Ga0466970_0196935 3300044765 Bacteria 1120
229 Ga0466957_0006451 3300044842 Bacteria 6624
230 Ga0466957_0014349 3300044842 Bacteria 4612
231 Ga0466957_0033476 3300044842 Bacteria 3083
232 Ga0466957_0077718 3300044842 Unclassified 2063
233 Ga0466957_0098312 3300044842 Bacteria 1842
234 Ga0466960_0003007 3300044901 Bacteria 6435
235 Ga0466960_0018704 3300044901 Bacteria 3041
236 Ga0466959_0103105 3300045049 Bacteria 2041
237 Ga0451576_0006729 3300045051 Bacteria 14003
238 Ga0466958_0028118 3300045836 Bacteria 3331
239 Ga0466958_0028819 3300045836 Bacteria 3294
240 Ga0466958_0059836 3300045836 Bacteria 2318
241 Ga0466958_0121628 3300045836 Bacteria 1635
242 Ga0466967_0001908 3300045976 Bacteria 12596
243 Ga0466967_0003455 3300045976 Bacteria 10312
244 Ga0466967_0006124 3300045976 Bacteria 8463
245 Ga0466967_0070867 3300045976 Bacteria 3119
246 Ga0466967_0084492 3300045976 Bacteria 2872
247 Ga0466967_0328924 3300045976 Bacteria 1475
248 Ga0495592_0004252 3300046454 Bacteria 10458
249 Ga0495592_0020414 3300046454 Bacteria 5038
250 Ga0495592_0076944 3300046454 Bacteria 2420
251 Ga0495592_0247974 3300046454 Unclassified 1179
252 Ga0495641_0015277 3300046461 Bacteria 4108
253 Ga0495651_0002866 3300046462 Bacteria 13359
254 Ga0495651_0007707 3300046462 Bacteria 8235
255 Ga0495651_0090728 3300046462 Bacteria 2292
256 Ga0495653_0019464 3300046463 Bacteria 5505
257 Ga0495653_0143884 3300046463 Unclassified 1673
258 Ga0495608_0077756 3300046511 Bacteria 2160
259 Ga0495618_0134563 3300046514 Bacteria 1581
260 Ga0495628_0000277 3300046516 Bacteria 45973
261 Ga0495628_0002586 3300046516 Bacteria 16269
262 Ga0495630_0004711 3300046517 Bacteria 9566
263 Ga0495630_0122541 3300046517 Bacteria 1972
264 Ga0495652_0001564 3300046529 Bacteria 25037
265 Ga0495652_0006827 3300046529 Bacteria 10580
266 Ga0495652_0049468 3300046529 Bacteria 3598
267 Ga0495640_0096901 3300046533 Bacteria 1940
268 Ga0495640_0109297 3300046533 Bacteria 1808
269 Ga0495645_0000603 3300046543 Bacteria 24774
270 Ga0495645_0000826 3300046543 Bacteria 21115
271 Ga0495667_0033701 3300046559 Bacteria 3427
272 Ga0495667_0043473 3300046559 Bacteria 2977
273 Ga0495635_0039032 3300046663 Bacteria 3287
274 Ga0495657_0005529 3300046675 Bacteria 9984
275 Ga0495599_0002346 3300046678 Bacteria 10990
276 Ga0495599_0044578 3300046678 Bacteria 2782
277 Ga0495599_0146353 3300046678 Bacteria 1464
278 Ga0495623_0022830 3300046679 Bacteria 4040
279 Ga0495658_0028500 3300046683 Bacteria 3014
280 Ga0495658_0032433 3300046683 Bacteria 2852
281 Ga0495600_0072834 3300046809 Bacteria 2243
282 Ga0495600_0144302 3300046809 Unclassified 1543
283 Ga0495604_0002180 3300047317 Bacteria 15716
284 Ga0495604_0022219 3300047317 Bacteria 5064
285 Ga0495674_0109079 3300047319 Bacteria 2348
286 Ga0495680_0008141 3300047322 Bacteria 9554
287 Ga0495680_0031157 3300047322 Bacteria 4345
288 Ga0495602_0178254 3300048088 Bacteria 1642
289 Ga0496102_0004713 3300048905 Bacteria 11543
290 Ga0496104_0000779 3300048907 Bacteria 27298
291 Ga0496105_0000397 3300048908 Bacteria 28655
292 Ga0496108_0133490 3300048911 Bacteria 2134
293 Ga0496108_0140868 3300048911 Bacteria 2078
294 Ga0496109_0004733 3300048912 Bacteria 11373
295 Ga0496109_0024630 3300048912 Bacteria 5352
296 Ga0496111_0028250 3300048914 Bacteria 3975
297 Ga0496111_0167494 3300048914 Bacteria 1632
298 Ga0496112_0132448 3300048915 Bacteria 2464
299 Ga0496113_0131212 3300048916 Bacteria 1966
300 Ga0496114_0120812 3300048917 Bacteria 2253
301 Ga0501031_0005670 3300049568 Bacteria 8135
302 Ga0501032_0002450 3300049569 Bacteria 14496
303 Ga0501033_0029673 3300049570 Bacteria 4110
304 Ga0501033_0215786 3300049570 Bacteria 1367
305 Ga0501034_0164209 3300049571 Bacteria 2190
306 Ga0501036_0139859 3300049572 Bacteria 2043
307 Ga0501036_0428305 3300049572 Bacteria 1103
308 Ga0501037_0015775 3300049573 Bacteria 5559
309 Ga0501037_0160616 3300049573 Bacteria 1602
310 Ga0501037_0334926 3300049573 Bacteria 1046
311 Ga0501038_0006101 3300049574 Bacteria 11151
312 Ga0501038_0018876 3300049574 Bacteria 6226
313 Ga0501038_0085215 3300049574 Bacteria 2658
314 Ga0501043_0011708 3300049579 Bacteria 6868
315 Ga0501043_0011869 3300049579 Bacteria 6823
316 Ga0501047_0004396 3300049581 Bacteria 13266
317 Ga0501047_0005224 3300049581 Bacteria 12189
318 Ga0501047_0181217 3300049581 Bacteria 1973
319 Ga0501047_0209486 3300049581 Bacteria 1808
320 Ga0501048_0007782 3300049582 Bacteria 8126
321 Ga0501070_0006991 3300049586 Bacteria 9602
322 Ga0501071_0217435 3300049587 Bacteria 1438
323 Ga0501080_0026912 3300049742 Bacteria 5348
324 Ga0501080_0057808 3300049742 Bacteria 3610
325 Ga0501035_0020764 3300049822 Bacteria 6035
326 Ga0501044_0019059 3300049823 Bacteria 7346
327 Ga0501044_0053736 3300049823 Bacteria 4143
328 Ga0501044_0169827 3300049823 Bacteria 2153
329 nmdc:mga08y16_4603_c1 3300050511 Bacteria 14382
330 nmdc:mga0n895_177767_c1 3300050512 Bacteria 2159
331 Ga0495601_0000069 3300053077 Bacteria 56291
332 Ga0495601_0003518 3300053077 Bacteria 9000
333 Ga0495612_0000296 3300053078 Bacteria 20216
334 Ga0495595_0007124 3300053084 Bacteria 4570
335 Ga0495595_0011072 3300053084 Bacteria 3764
336 Ga0495619_0001027 3300053085 Bacteria 18303
337 Ga0495619_0005145 3300053085 Bacteria 8305
338 Ga0501084_0222167 3300054114 Bacteria 1594
339 Ga0466962_0004214 3300061719 Bacteria 6888
340 Ga0466962_0010212 3300061719 Bacteria 4510
341 Ga0466962_0012471 3300061719 Bacteria 4086
342 Ga0466962_0112671 3300061719 Bacteria 1310
343 Ga0070712_100092336
344 MBSR1b_contig_2218305
345 2214656047
346 ARcpr5oldR_c000077
347 ARSoilYngRDRAFT_c00139
348 ARcpr5yngRDRAFT_c000059
349 ARSoilOldRDRAFT_c000025
350 ARCol0oldRDRAFT_c00088
351 ARCol0yngRDRAFT_1000013
352 JGI24737J22298_10009129
353 JGI24735J21928_10011820
354 Ga0065717_1001942
355 Ga0065712_10080341
356 Ga0065715_10091869
357 Ga0070658_10006976
358 Ga0070658_10057323
359 Ga0070658_10116206
360 Ga0070683_100008458
361 Ga0070683_100015504
362 Ga0070683_100030522
363 Ga0070683_100059034
364 Ga0070683_100123716
365 Ga0070680_100008874
366 Ga0070680_100009900
367 Ga0070680_100016781
368 Ga0070680_100066217
369 Ga0070660_100017501
370 Ga0070660_100018397
371 Ga0070660_100207463
372 Ga0070661_100008981
373 Ga0070661_100044386
374 Ga0070668_100079129
375 Ga0070669_100248619
376 Ga0070674_100227405
377 Ga0070659_100044289
378 Ga0070659_100074445
379 Ga0070714_100000029
380 Ga0070714_100024042
381 Ga0070713_100131981
382 Ga0070711_100015592
383 Ga0070700_100000033
384 Ga0070694_100057599
385 Ga0070708_100331874
386 Ga0070663_100004734
387 Ga0070681_10002456
388 Ga0070681_10010230
389 Ga0070706_100029117
390 Ga0070707_100010946
391 Ga0070707_100042004
392 Ga0070698_100008527
393 Ga0070679_100003476
394 Ga0070679_100005483
395 Ga0070679_100029420
396 Ga0070679_100102061
397 Ga0070679_100183843
398 Ga0070684_100003733
399 Ga0070684_100007991
400 Ga0070684_100009951
401 Ga0070684_100106340
402 Ga0070684_100367498
403 Ga0070697_100285619
404 Ga0068853_100022679
405 Ga0070696_100003597
406 Ga0070704_100018756
407 Ga0068855_100007750
408 Ga0068855_100015197
409 Ga0068855_100073440
410 Ga0068855_100105337
411 Ga0068854_100008749
412 Ga0068856_100027031
413 Ga0068856_100122010
414 Ga0068852_100249901
415 Ga0068859_100304046
416 Ga0068862_100012458
417 Ga0081455_10006889
418 Ga0070712_100036297
419 Ga0075434_100022418
420 Ga0097620_100304066
421 Ga0105240_10001127
422 Ga0105240_10480544
423 Ga0111539_10007375
424 Ga0105241_10038237
425 Ga0105241_10183372
426 Ga0105238_10313933
427 Ga0105249_10013911
428 Ga0105239_10074948
429 Ga0157371_10014150
430 Ga0157370_10001801
431 Ga0157370_10050590
432 Ga0157369_10069733
433 Ga0157374_10222373
434 Ga0157378_10182037
435 Ga0157372_10000004
436 Ga0157372_10009424
437 Ga0157372_10010791
438 Ga0157372_10037956
439 Ga0157372_10289098
440 Ga0157377_10079158
441 Ga0206353_10242963
442 Ga0206353_10272634
443 Ga0206353_11034235
444 Ga0213875_10052022
445 Ga0207647_10148357
446 Ga0207705_10001819
447 Ga0207705_10015910
448 Ga0207705_10034472
449 Ga0207684_10020534
450 Ga0207654_10102268
451 Ga0207707_10001250
452 Ga0207707_10003135
453 Ga0207707_10016348
454 Ga0207695_10019737
455 Ga0207695_10023734
456 Ga0207695_10055088
457 Ga0207671_10093636
458 Ga0207663_10005588
459 Ga0207660_10004817
460 Ga0207660_10042585
461 Ga0207657_10020115
462 Ga0207657_10027334
463 Ga0207649_10194277
464 Ga0207652_10059422
465 Ga0207652_10069143
466 Ga0207652_10079591
467 Ga0207652_10122478
468 Ga0207646_10319426
469 Ga0207700_10124420
470 Ga0207700_10241161
471 Ga0207664_10000028
472 Ga0207664_10084948
473 Ga0207690_10028996
474 Ga0207669_10242370
475 Ga0207704_10059972
476 Ga0207661_10004060
477 Ga0207661_10007760
478 Ga0207661_10054834
479 Ga0207661_10068561
480 Ga0207661_10144481
481 Ga0207661_10201107
482 Ga0207661_10264758
483 Ga0207667_10028306
484 Ga0207667_10049011
485 Ga0207667_10076216
486 Ga0207667_10165544
487 Ga0207640_10055731
488 Ga0207639_10030716
489 Ga0207678_10017923
490 Ga0207678_10033267
491 Ga0207708_10000004
492 Ga0207702_10084336
493 Ga0207674_10471748
494 Ga0207428_10000695
495 Ga0268265_10010413
496 Ga0265325_10000111
497 Ga0265313_10007120
498 Ga0316575_10029336
499 Ga0316579_10030846
500 Ga0373930_0001854
501 Ga0373948_0000192
502 Ga0373958_0003524
503 Ga0373959_0001523
504 Ga0373938_0000120
505 Ga0373928_0000303
506 Ga0373929_0000151
507 Ga0373940_0000287
508 Ga0373949_0001554
509 Ga0373951_0001032
510 Ga0373952_0000010
511 Ga0373932_0000145
512 Ga0373939_0000846
513 Ga0373941_0000539
514 Ga0373953_0007865
515 Ga0373954_0002477
516 Ga0373954_0071203
517 Ga0373956_0000163
518 Ga0373957_0002054
519 Ga0373957_0006070
520 Ga0373960_0000020
521 Ga0373955_0004018
522 Ga0373955_0045321
523 Ga0373955_0067826
524 Ga0373955_0090352
525 Ga0373942_0000340
526 Ga0373961_0000443
527 Ga0373962_0000220
528 Ga0373924_0059710
529 Ga0373931_0001711
530 Ga0373935_0127208
531 Ga0373933_0004043
532 Ga0373933_0016193
533 Ga0373937_0002769
534 Ga0373937_0023453
535 Ga0373937_0317382
536 Ga0373937_0414865
537 Ga0373925_0007331
538 Ga0436364_1054482
539 Ga0436364_1279811
540 Ga0242420_002359
541 Ga0451577_0017811
542 Ga0451577_0517856
543 Ga0466972_0012214
544 Ga0466972_0101664
545 Ga0453683_0043557
546 Ga0466965_0119606
547 Ga0466966_0024051
548 Ga0466961_0010279
549 Ga0466961_0015870
550 Ga0466961_0036793
551 Ga0466961_0110853
552 Ga0466961_0163388
553 Ga0466961_0212338
554 Ga0466963_0004882
555 Ga0466963_0005935
556 Ga0466963_0007716
557 Ga0466963_0035767
558 Ga0466963_0046822
559 Ga0466963_0052806
560 Ga0466963_0097619
561 Ga0466963_0123799
562 Ga0466963_0139767
563 Ga0466964_0008860
564 Ga0466964_0032117
565 Ga0453684_0112726
566 Ga0466971_0024938
567 Ga0466971_0061886
568 Ga0466968_0127871
569 Ga0466970_0024760
570 Ga0466970_0196935
571 Ga0466957_0006451
572 Ga0466957_0014349
573 Ga0466957_0033476
574 Ga0466957_0077718
575 Ga0466957_0098312
576 Ga0466960_0003007
577 Ga0466960_0018704
578 Ga0466959_0103105
579 Ga0451576_0006729
580 Ga0466958_0028118
581 Ga0466958_0028819
582 Ga0466958_0059836
583 Ga0466958_0121628
584 Ga0466967_0001908
585 Ga0466967_0003455
586 Ga0466967_0006124
587 Ga0466967_0070867
588 Ga0466967_0084492
589 Ga0466967_0328924
590 Ga0495592_0004252
591 Ga0495592_0020414
592 Ga0495592_0076944
593 Ga0495592_0247974
594 Ga0495641_0015277
595 Ga0495651_0002866
596 Ga0495651_0007707
597 Ga0495651_0090728
598 Ga0495653_0019464
599 Ga0495653_0143884
600 Ga0495608_0077756
601 Ga0495618_0134563
602 Ga0495628_0000277
603 Ga0495628_0002586
604 Ga0495630_0004711
605 Ga0495630_0122541
606 Ga0495652_0001564
607 Ga0495652_0006827
608 Ga0495652_0049468
609 Ga0495640_0096901
610 Ga0495640_0109297
611 Ga0495645_0000603
612 Ga0495645_0000826
613 Ga0495667_0033701
614 Ga0495667_0043473
615 Ga0495635_0039032
616 Ga0495657_0005529
617 Ga0495599_0002346
618 Ga0495599_0044578
619 Ga0495599_0146353
620 Ga0495623_0022830
621 Ga0495658_0028500
622 Ga0495658_0032433
623 Ga0495600_0072834
624 Ga0495600_0144302
625 Ga0495604_0002180
626 Ga0495604_0022219
627 Ga0495674_0109079
628 Ga0495680_0008141
629 Ga0495680_0031157
630 Ga0495602_0178254
631 Ga0496102_0004713
632 Ga0496104_0000779
633 Ga0496105_0000397
634 Ga0496108_0133490
635 Ga0496108_0140868
636 Ga0496109_0004733
637 Ga0496109_0024630
638 Ga0496111_0028250
639 Ga0496111_0167494
640 Ga0496112_0132448
641 Ga0496113_0131212
642 Ga0496114_0120812
643 Ga0501031_0005670
644 Ga0501032_0002450
645 Ga0501033_0029673
646 Ga0501033_0215786
647 Ga0501034_0164209
648 Ga0501036_0139859
649 Ga0501036_0428305
650 Ga0501037_0015775
651 Ga0501037_0160616
652 Ga0501037_0334926
653 Ga0501038_0006101
654 Ga0501038_0018876
655 Ga0501038_0085215
656 Ga0501043_0011708
657 Ga0501043_0011869
658 Ga0501047_0004396
659 Ga0501047_0005224
660 Ga0501047_0181217
661 Ga0501047_0209486
662 Ga0501048_0007782
663 Ga0501070_0006991
664 Ga0501071_0217435
665 Ga0501080_0026912
666 Ga0501080_0057808
667 Ga0501035_0020764
668 Ga0501044_0019059
669 Ga0501044_0053736
670 Ga0501044_0169827
671 nmdc:mga08y16_4603_c1
672 nmdc:mga0n895_177767_c1
673 Ga0495601_0000069
674 Ga0495601_0003518
675 Ga0495612_0000296
676 Ga0495595_0007124
677 Ga0495595_0011072
678 Ga0495619_0001027
679 Ga0495619_0005145
680 Ga0501084_0222167
681 Ga0466962_0004214
682 Ga0466962_0010212
683 Ga0466962_0012471
684 Ga0466962_0112671

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01040

UbiA

UbiA prenyltransferase family

66

327

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.7649 50 309
8djm-assembly1.cif.gz_B hmgcr-ubiad1 complex state 1 0.7563 5 313
4od4-assembly1.cif.gz_A error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.6884 50 309
4tq3-assembly1.cif.gz_A structure of a ubia homolog from archaeoglobus fulgidus bound to gpp and mg2+ 0.6824 50 313
8djm-assembly1.cif.gz_B hmgcr-ubiad1 complex state 1 0.6752 5 313
ID Description Score Start End Superfamily
af_Q2FZM0_184_310_1.20.120.1780 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);UbiA prenyltransferase 0.89 188 318 1.20.120.1780
af_Q2FZM0_17_182_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.8833 50 184 1.10.357.140
af_P9WIP3_19_264_1.10.357.140 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;UbiA prenyltransferase 0.8805 46 275 1.10.357.140
af_Q2FZM0_184_310_1.20.120.1780 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);UbiA prenyltransferase 0.8703 188 318 1.20.120.1780
af_P32166_24_288_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.8643 54 300 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A7Y5QZ78-F1-model_v4 Prenyltransferase 0.9899 75 320 GO:0004659
GO:0009234
GO:0016020
GO:0032194
GO:0042371
AF-A0A7Y5QZ78-F1-model_v4 Prenyltransferase 0.9742 75 320 GO:0004659
GO:0009234
GO:0016020
GO:0032194
GO:0042371
AF-A0A2E9GLU1-F1-model_v4 Prenyltransferase 0.9719 51 318 GO:0004659
GO:0009234
GO:0016020
GO:0032194
GO:0042371
AF-A0A3A4QLI3-F1-model_v4 Prenyltransferase 0.9648 132 320 GO:0004659
GO:0009234
GO:0016020
GO:0032194
GO:0042371
AF-A0A3D0U129-F1-model_v4 Prenyltransferase 0.9645 92 318 GO:0004659
GO:0009234
GO:0016020
GO:0032194
GO:0042371

Map