F414386

General Info

Members Datasets Scaffolds Average Seq Length
340 252 256 590

Family's Representative Sequence

Representative Sequence 3300031238|Ga0265332_10000128|Ga0265332_1000012824
Length 605
Sequence MYQYTEFDHQFVKNRAAQYRDQLERNLAGTLGDAEFRPLRLQNGWYIQRYAPMLRVSVPYGELSSPQLRVLAKIAREYDQPAAELFEQAQHTQDQLSALKAPRLKHGYGHFTTRLNVQYNWIPLTKSADVMDLLASANMHGIQTSGNCIRNIASDALAGIAVDEVADPRPFCEIIRQWGTLHPEFAFLPRKFKISVTGGAEDRAAIAWYDVGLQLVRSEQGELGFKVRVGGGMGRTPLISTVVREFLPWNQILNYLEAVIRVYNGYGRRDNVWKARIKILVKAEGQRYIDQVEAEYQQILELDGAPHTITQAEFDRVSACFVPPVLNAASATVAPLTAAEAPEYARWLARNVTAHRDPTLRAVTLSFKRLGYAPGDATDDQLDAAADLADQFSAGEARVTHEQNLLLPWVRADQLPALWRAARALGLARANIGLLTDMISCPGGDFCSLANARSIPIAAAITERYQDMDELFDLGDIDLHISGCINSCGHHHSGHIGILGVDKDGREWYQVSLGGSDGSTLSGPATPGKVLGPSFGAAEIPGVVEAILDTYRAQRIGKEYFIDTLKRVGHEPFKAAANAARIPNLSQGEDVLHNPPGYARDTQEA

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
4 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
5 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
6 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
7 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
8 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
9 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
10 2547132374 Acidovorax radicis N35 Isolate Unclassified
11 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
12 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
13 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
14 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
15 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
16 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
17 2643221570 Acidovorax sp. Root568 Isolate Unclassified
18 2643221596 Acidovorax sp. Root70 Isolate Unclassified
19 2643221609 Acidovorax sp. Root217 Isolate Unclassified
20 2643221611 Acidovorax sp. Root219 Isolate Unclassified
21 2643221652 Acidovorax sp. Root402 Isolate Unclassified
22 2643221672 Variovorax sp. Root434 Isolate Unclassified
23 2643221683 Variovorax sp. Root473 Isolate Unclassified
24 2643221717 Acidovorax sp. Root267 Isolate Unclassified
25 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
26 2721755523 Delftia sp. HK171 Isolate Unclassified
27 2738541277 Variovorax sp. GV051 Isolate Unclassified
28 2738541307 Variovorax sp. GV008 Isolate Unclassified
29 2738543012 Acidovorax sp. CF301 Isolate Unclassified
30 2738543013 Variovorax sp. BT01 Isolate Unclassified
31 2738543019 Variovorax sp. GV040 Isolate Unclassified
32 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
33 2816332133 Acidovorax radicis 2721A Isolate Unclassified
34 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
35 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
36 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
37 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
38 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
39 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
40 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
41 2842677519 Variovorax sp. R-72495 Isolate Unclassified
42 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
43 2842733646 Variovorax sp. R-72446 Isolate Unclassified
44 2842747753 Variovorax sp. R-72060 Isolate Unclassified
45 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
46 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
47 2885198086 Variovorax sp. 679 Isolate Unclassified
48 2885211737 Variovorax sp. 553 Isolate Unclassified
49 2885270888 Paraburkholderia sp. UYCPa14C Isolate Unclassified
50 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
51 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
52 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
53 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
54 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
55 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
56 2904456579 Variovorax sp. 2002 Isolate Unclassified
57 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
58 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
59 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
60 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
61 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
62 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
63 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
64 2928070936 Variovorax gossypii 1167 Isolate Unclassified
65 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
66 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
67 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
68 2929520902 Variovorax beijingensis 502 Isolate Unclassified
69 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
70 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
71 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
72 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
73 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
74 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
75 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
76 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
77 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
78 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
79 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
80 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
81 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
82 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
83 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
84 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
85 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
86 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
87 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
88 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
89 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
90 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
91 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
92 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
93 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
94 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
95 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
96 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
97 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
98 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
99 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
100 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
101 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
102 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
103 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
104 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
105 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
106 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
107 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
108 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
109 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
110 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
111 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
112 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
113 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
114 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
115 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
116 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
117 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
118 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
119 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
120 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
121 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
122 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
123 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
125 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
126 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
127 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
129 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
130 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
143 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
144 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
145 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
146 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
147 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
148 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
149 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
150 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
151 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
152 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
153 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
154 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
155 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
156 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
157 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
158 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
159 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
160 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
161 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
162 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
163 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
164 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
165 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
166 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
167 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
168 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
169 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
170 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
171 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
172 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
173 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
174 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
175 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
176 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
177 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
178 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
179 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
180 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
181 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
182 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
183 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
184 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
185 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
186 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
187 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
188 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
189 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
190 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
191 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
192 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
193 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
194 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
195 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
196 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
197 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
198 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
199 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
200 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
201 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
202 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
203 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
204 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
205 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
206 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
207 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
208 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
209 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
210 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
211 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
212 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
213 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
214 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
215 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
216 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
217 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
218 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
219 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
220 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
221 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
222 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
223 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
224 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
225 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
226 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
227 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
228 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
229 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
230 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
231 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
232 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
233 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
234 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
235 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
236 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
237 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
238 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
239 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
240 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
241 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
242 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
243 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
244 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
245 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
246 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
247 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
248 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
249 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
250 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
251 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
252 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.29
Metatranscriptomes 0
Isolates 24.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.65
Nodule 3.24
Rhizoplane 5.29
Rhizosphere 46.47
Stem 0
Stem Tuber 0
Unclassified 22.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000347 3300002067 Bacteria 16173
2 JGI24735J21928_10004298 3300002067 Bacteria 4793
3 JGI24738J21930_10002111 3300002075 Bacteria 5314
4 JGI25155J39150_1000052 3300002704 Bacteria 75845
5 JGI25156J39149_1000023 3300002705 Bacteria 146831
6 JGI25156J39149_1000131 3300002705 Bacteria 54470
7 JGI25154J39366_1000036 3300002738 Bacteria 161697
8 JGI25157J39369_1000023 3300002741 Bacteria 161697
9 JGI25150J39212_1001482 3300002774 Bacteria 6536
10 JGI25151J46595_10013939 3300003187 Bacteria 3600
11 JGI25151J46595_10019536 3300003187 Bacteria 2877
12 JGI25160J50197_1000029 3300003354 Bacteria 179129
13 JGI25160J50197_1000213 3300003354 Bacteria 47438
14 JGI25161J50226_1000015 3300003374 Bacteria 183773
15 Ga0055526_1005188 3300003771 Bacteria 7569
16 Ga0055537_1000034 3300003773 Bacteria 98043
17 Ga0055537_1000491 3300003773 Bacteria 24128
18 Ga0055524_1000016 3300003775 Bacteria 244926
19 Ga0055534_1000450 3300003784 Bacteria 24128
20 Ga0055534_1003533 3300003784 Bacteria 4883
21 Ga0055528_1000934 3300003790 Bacteria 19533
22 Ga0055528_1003217 3300003790 Bacteria 8339
23 Ga0055530_10000243 3300003791 Bacteria 49150
24 Ga0055540_1000031 3300003792 Bacteria 177859
25 Ga0055540_1010343 3300003792 Bacteria 3115
26 Ga0055531_10001077 3300003794 Bacteria 21442
27 Ga0065165_1000040 3300005262 Bacteria 205767
28 Ga0070666_10008740 3300005335 Bacteria 6295
29 Ga0070698_100000785 3300005471 Bacteria 34435
30 Ga0070665_100005277 3300005548 Bacteria 13348
31 Ga0070664_100024233 3300005564 Bacteria 5019
32 Ga0075365_10001116 3300006038 Bacteria 11720
33 Ga0075364_10014395 3300006051 Bacteria 4886
34 Ga0075370_10008603 3300006353 Bacteria 5261
35 Ga0075370_10043379 3300006353 Bacteria 2542
36 Ga0099826_10000238 3300006948 Bacteria 24197
37 Ga0105251_10000117 3300009011 Bacteria 79453
38 Ga0105243_10012744 3300009148 Bacteria 6350
39 Ga0105241_10094688 3300009174 Bacteria 2362
40 Ga0157326_1002222 3300012513 Bacteria 2092
41 Ga0182008_10000400 3300014497 Bacteria 33653
42 Ga0182008_10004746 3300014497 Bacteria 7868
43 Ga0157376_10020538 3300014969 Bacteria 5111
44 Ga0182007_10002800 3300015262 Bacteria 8489
45 Ga0183362_10001 3300015683 Bacteria 2046624
46 Ga0163161_10050743 3300017792 Bacteria 3003
47 Ga0209435_100001 3300025206 Bacteria 1424171
48 Ga0209646_1000001 3300025246 Bacteria 3092932
49 Ga0209026_1000003 3300025250 Bacteria 1060571
50 Ga0209759_1000001 3300025256 Bacteria 2799452
51 Ga0209759_1000217 3300025256 Bacteria 88349
52 Ga0209129_1000007 3300025258 Bacteria 771325
53 Ga0209565_1000004 3300025263 Bacteria 983150
54 Ga0209565_1000075 3300025263 Bacteria 162259
55 Ga0209565_1000697 3300025263 Bacteria 20786
56 Ga0209673_1000045 3300025273 Bacteria 290531
57 Ga0209673_1000133 3300025273 Bacteria 161740
58 Ga0209673_1000304 3300025273 Bacteria 91151
59 Ga0209673_1001340 3300025273 Bacteria 24629
60 Ga0209673_1002778 3300025273 Bacteria 11389
61 Ga0209130_1000056 3300025284 Bacteria 210851
62 Ga0209130_1000326 3300025284 Bacteria 54842
63 Ga0209130_1001865 3300025284 Bacteria 12060
64 Ga0209130_1004306 3300025284 Bacteria 5492
65 Ga0209675_1000074 3300025291 Bacteria 162260
66 Ga0209675_1000273 3300025291 Bacteria 49501
67 Ga0209675_1000660 3300025291 Bacteria 24237
68 Ga0209675_1002591 3300025291 Bacteria 9183
69 Ga0209675_1003665 3300025291 Bacteria 7189
70 Ga0209676_1000007 3300025292 Bacteria 1029371
71 Ga0209676_1000122 3300025292 Bacteria 195510
72 Ga0209025_1000073 3300025294 Bacteria 282133
73 Ga0209025_1002684 3300025294 Bacteria 18159
74 Ga0209025_1006026 3300025294 Bacteria 9609
75 Ga0209564_1000358 3300025295 Bacteria 85036
76 Ga0209564_1000524 3300025295 Bacteria 62668
77 Ga0209564_1000594 3300025295 Bacteria 56686
78 Ga0209564_1005508 3300025295 Bacteria 7182
79 Ga0209564_1006197 3300025295 Bacteria 6543
80 Ga0209758_1000025 3300025297 Bacteria 586687
81 Ga0209050_1000002 3300025298 Bacteria 1792849
82 Ga0209050_1000003 3300025298 Bacteria 1609245
83 Ga0209050_1004147 3300025298 Bacteria 10038
84 Ga0209050_1016722 3300025298 Bacteria 2977
85 Ga0209256_1000001 3300025299 Bacteria 2166974
86 Ga0209256_1000050 3300025299 Bacteria 308622
87 Ga0209256_1000063 3300025299 Bacteria 252716
88 Ga0207426_1000001 3300025302 Bacteria 1341301
89 Ga0207426_1000004 3300025302 Bacteria 1047900
90 Ga0207426_1000025 3300025302 Bacteria 532921
91 Ga0207426_1000028 3300025302 Bacteria 483955
92 Ga0207426_1002162 3300025302 Bacteria 13332
93 Ga0209051_1000002 3300025303 Bacteria 1631846
94 Ga0209051_1000003 3300025303 Bacteria 1609245
95 Ga0209051_1000665 3300025303 Bacteria 38573
96 Ga0209051_1014966 3300025303 Bacteria 3595
97 Ga0209257_1000002 3300025304 Bacteria 1767052
98 Ga0209257_1000018 3300025304 Bacteria 836016
99 Ga0207655_1007127 3300025728 Bacteria 7297
100 Ga0207713_1007710 3300025735 Bacteria 6293
101 Ga0207680_10015207 3300025903 Bacteria 4012
102 Ga0207647_10022577 3300025904 Bacteria 4176
103 Ga0207695_10152135 3300025913 Bacteria 2252
104 Ga0207687_10025954 3300025927 Bacteria 3921
105 Ga0207706_10001871 3300025933 Bacteria 20626
106 Ga0207709_10000207 3300025935 Bacteria 76905
107 Ga0207709_10000830 3300025935 Bacteria 23784
108 Ga0207711_10019449 3300025941 Bacteria 5653
109 Ga0207689_10096174 3300025942 Bacteria 2432
110 Ga0209281_1000067 3300027111 Bacteria 284517
111 Ga0209983_1008815 3300027665 Bacteria 2059
112 Ga0209282_1001162 3300027666 Bacteria 14129
113 Ga0307515_10000137 3300028794 Bacteria 173516
114 Ga0265338_10000045 3300028800 Bacteria 223264
115 Ga0265338_10000239 3300028800 Bacteria 101471
116 Ga0314311_1086564 3300030733 Bacteria 4451
117 Ga0316182_1135218 3300030745 Bacteria 5709
118 Ga0265332_10000128 3300031238 Bacteria 63543
119 Ga0265332_10004584 3300031238 Bacteria 6469
120 Ga0265331_10001772 3300031250 Bacteria 15463
121 Ga0265331_10008884 3300031250 Bacteria 5686
122 Ga0265327_10000012 3300031251 Bacteria 530403
123 Ga0265327_10000189 3300031251 Bacteria 130573
124 Ga0265327_10002156 3300031251 Bacteria 21699
125 Ga0307513_10000010 3300031456 Bacteria 360812
126 Ga0307513_10000121 3300031456 Bacteria 109551
127 Ga0307408_100008363 3300031548 Bacteria 6832
128 Ga0307408_100010408 3300031548 Bacteria 6132
129 Ga0307408_100017834 3300031548 Bacteria 4756
130 Ga0265314_10025699 3300031711 Bacteria 4437
131 Ga0307516_10003651 3300031730 Bacteria 19550
132 Ga0307405_10033761 3300031731 Bacteria 3038
133 Ga0307406_10007468 3300031901 Bacteria 6061
134 Ga0307412_10000839 3300031911 Bacteria 17665
135 Ga0373936_0000033 3300035113 Bacteria 112284
136 Ga0395905_0000035 3300037471 Bacteria 272014
137 Ga0400485_10394 3300038735 Bacteria 4646
138 Ga0400486_04334 3300038742 Bacteria 8174
139 Ga0436361_0867198 3300039447 Bacteria 16499
140 Ga0439436_0000136 3300041404 Bacteria 16870
141 Ga0439465_0000168 3300041413 Bacteria 16705
142 Ga0439432_000603 3300042006 Bacteria 13511
143 Ga0450918_000203 3300042531 Bacteria 13437
144 Ga0451577_0000114 3300042876 Bacteria 175957
145 Ga0453684_0000401 3300044712 Bacteria 178536
146 Ga0453684_0001710 3300044712 Bacteria 59044
147 Ga0453684_0349912 3300044712 Bacteria 1666
148 Ga0451576_0003831 3300045051 Bacteria 20210
149 Ga0451576_0003849 3300045051 Bacteria 20145
150 Ga0451576_0058249 3300045051 Bacteria 4037
151 Ga0451576_0101418 3300045051 Bacteria 2993
152 Ga0495592_0030417 3300046454 Bacteria 4084
153 Ga0495603_0016270 3300046455 Bacteria 4501
154 Ga0495603_0032477 3300046455 Bacteria 3140
155 Ga0495590_0001073 3300046457 Bacteria 12054
156 Ga0495629_0000023 3300046459 Bacteria 142325
157 Ga0495629_0003119 3300046459 Bacteria 12560
158 Ga0495638_0001265 3300046460 Bacteria 23591
159 Ga0495651_0055559 3300046462 Bacteria 3042
160 Ga0495653_0000234 3300046463 Bacteria 44654
161 Ga0495650_0006187 3300046471 Bacteria 7517
162 Ga0495650_0006875 3300046471 Bacteria 6989
163 Ga0495650_0010060 3300046471 Bacteria 5315
164 Ga0495650_0023702 3300046471 Bacteria 2916
165 Ga0495580_0012269 3300046472 Bacteria 6579
166 Ga0495582_0023699 3300046473 Bacteria 3356
167 Ga0495605_0004888 3300046474 Bacteria 7834
168 Ga0495605_0023205 3300046474 Bacteria 3266
169 Ga0495639_0055807 3300046475 Bacteria 1802
170 Ga0495583_0003201 3300046506 Bacteria 12826
171 Ga0495583_0005240 3300046506 Bacteria 8894
172 Ga0495608_0014413 3300046511 Bacteria 5484
173 Ga0495610_0004158 3300046512 Bacteria 10829
174 Ga0495618_0007576 3300046514 Bacteria 6570
175 Ga0495620_0008813 3300046515 Bacteria 5396
176 Ga0495628_0006415 3300046516 Bacteria 10273
177 Ga0495630_0021928 3300046517 Bacteria 4717
178 Ga0495630_0040112 3300046517 Bacteria 3498
179 Ga0495631_0001000 3300046518 Bacteria 17547
180 Ga0495648_0045302 3300046524 Bacteria 2737
181 Ga0495666_0013637 3300046526 Bacteria 4053
182 Ga0495652_0013247 3300046529 Bacteria 7424
183 Ga0495665_0015765 3300046531 Bacteria 4070
184 Ga0495665_0025228 3300046531 Bacteria 3193
185 Ga0495640_0007739 3300046533 Bacteria 8453
186 Ga0495597_0001766 3300046542 Bacteria 14841
187 Ga0495597_0018949 3300046542 Bacteria 3224
188 Ga0495645_0002457 3300046543 Bacteria 12589
189 Ga0495645_0038267 3300046543 Bacteria 3499
190 Ga0495633_0005073 3300046558 Bacteria 8192
191 Ga0495667_0017513 3300046559 Bacteria 4839
192 Ga0495656_0001920 3300046615 Bacteria 6858
193 Ga0495634_0013840 3300046642 Bacteria 5828
194 Ga0495635_0017043 3300046663 Bacteria 5073
195 Ga0495646_0006357 3300046680 Bacteria 7492
196 Ga0495646_0019269 3300046680 Bacteria 4320
197 Ga0495669_0002004 3300046684 Bacteria 8360
198 Ga0495613_0026348 3300046689 Bacteria 4332
199 Ga0495624_0007731 3300046690 Bacteria 7541
200 Ga0495600_0018672 3300046809 Bacteria 4421
201 Ga0495581_0012147 3300047315 Bacteria 4985
202 Ga0495581_0023315 3300047315 Bacteria 3586
203 Ga0495604_0001443 3300047317 Bacteria 19513
204 Ga0495674_0015089 3300047319 Bacteria 7229
205 Ga0495674_0032676 3300047319 Bacteria 4718
206 Ga0495674_0037866 3300047319 Bacteria 4332
207 Ga0495674_0043180 3300047319 Bacteria 4014
208 Ga0495672_0001931 3300047320 Bacteria 19599
209 Ga0495672_0011760 3300047320 Bacteria 6156
210 Ga0495680_0039979 3300047322 Bacteria 3737
211 Ga0495680_0056369 3300047322 Bacteria 3043
212 Ga0495675_0009196 3300047444 Bacteria 6145
213 Ga0495679_000009 3300047446 Bacteria 343637
214 Ga0495679_012219 3300047446 Bacteria 3277
215 Ga0495686_0012278 3300047472 Bacteria 5997
216 Ga0495593_0022161 3300047673 Bacteria 3544
217 Ga0495602_0016356 3300048088 Bacteria 7464
218 Ga0495614_0001722 3300048089 Bacteria 9556
219 Ga0495626_0015835 3300048091 Bacteria 3848
220 Ga0496100_0000467 3300048903 Bacteria 19380
221 Ga0496100_0000969 3300048903 Bacteria 13774
222 Ga0496101_0000134 3300048904 Bacteria 65710
223 Ga0496101_0001244 3300048904 Bacteria 15225
224 Ga0496102_0000181 3300048905 Bacteria 85605
225 Ga0496103_0000772 3300048906 Bacteria 23602
226 Ga0496103_0004132 3300048906 Bacteria 8813
227 Ga0496104_0000688 3300048907 Bacteria 29108
228 Ga0496106_0042087 3300048909 Bacteria 3425
229 Ga0496108_0052578 3300048911 Bacteria 3414
230 Ga0496110_0011222 3300048913 Bacteria 7324
231 Ga0496110_0022320 3300048913 Bacteria 5372
232 Ga0496111_0004270 3300048914 Bacteria 9002
233 Ga0496112_0001094 3300048915 Bacteria 20064
234 Ga0496116_0018605 3300048919 Bacteria 5345
235 Ga0496116_0026386 3300048919 Bacteria 4251
236 Ga0496117_0004049 3300048920 Bacteria 16474
237 Ga0496118_0000135 3300048921 Bacteria 130330
238 Ga0496118_0026575 3300048921 Bacteria 4926
239 Ga0496118_0052974 3300048921 Bacteria 3089
240 Ga0496121_0000361 3300048924 Bacteria 93571
241 Ga0496121_0018270 3300048924 Bacteria 7083
242 Ga0496122_0000034 3300048925 Bacteria 320661
243 Ga0496122_0049438 3300048925 Bacteria 3220
244 Ga0496123_0000069 3300048926 Bacteria 201579
245 Ga0496123_0006895 3300048926 Bacteria 10873
246 Ga0496124_0012324 3300048927 Bacteria 8444
247 Ga0496124_0055974 3300048927 Bacteria 3330
248 Ga0496125_0039250 3300048928 Bacteria 4080
249 Ga0501262_000481 3300049759 Bacteria 4765
250 Ga0501266_002897 3300049763 Bacteria 2140
251 Ga0500643_011948 3300053087 Bacteria 3134
252 Ga0500566_0023930 3300053094 Bacteria 3587
253 Ga0500607_002946 3300053121 Bacteria 12972
254 Ga0500658_0002913 3300053134 Bacteria 6571
255 Ga0500616_0054622 3300053153 Bacteria 2091
256 Ga0500645_000495 3300053730 Bacteria 26533

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046472 Ga0495580_0012269 Ga0495580_0012269_24_1394 427
2 3300044712 Ga0453684_0349912 Ga0453684_0349912_102_1637 492
3 3300046455 Ga0495603_0032477 Ga0495603_0032477_663_2282 510
4 3300046459 Ga0495629_0003119 Ga0495629_0003119_2336_3955 510
5 3300046462 Ga0495651_0055559 Ga0495651_0055559_719_2338 510
6 3300046471 Ga0495650_0010060 Ga0495650_0010060_2355_3974 510
7 3300046473 Ga0495582_0023699 Ga0495582_0023699_362_1981 510
8 3300046475 Ga0495639_0055807 Ga0495639_0055807_84_1703 510
9 3300046531 Ga0495665_0025228 Ga0495665_0025228_13_1632 510
10 3300046543 Ga0495645_0002457 Ga0495645_0002457_8606_10225 510
11 3300047315 Ga0495581_0023315 Ga0495581_0023315_1470_3089 510
12 3300046506 Ga0495583_0005240 Ga0495583_0005240_35_1618 511
13 3300047319 Ga0495674_0037866 Ga0495674_0037866_14_1597 511
14 3300046531 Ga0495665_0015765 Ga0495665_0015765_2411_4030 518
15 3300047673 Ga0495593_0022161 Ga0495593_0022161_41_1660 518
16 3300038735 Ga0400485_10394 Ga0400485_10394_2288_3970 532
17 3300038742 Ga0400486_04334 Ga0400486_04334_4228_5910 532
18 iso_pu_bacteria 2894510363 2894513940 535
19 iso_pu_bacteria 2989392574 2989393385 535
20 3300031250 Ga0265331_10008884 Ga0265331_100088846 539
21 3300031251 Ga0265327_10000189 Ga0265327_1000018916 539
22 3300031711 Ga0265314_10025699 Ga0265314_100256995 539
23 iso_pu_bacteria 2898795034 2898798982 541
24 iso_pu_bacteria 2837678835 2837681089 542
25 iso_pu_bacteria 2919679072 2919680932 542
26 3300031238 Ga0265332_10004584 Ga0265332_100045844 543
27 3300031456 Ga0307513_10000121 Ga0307513_1000012172 543
28 3300053730 Ga0500645_000495 Ga0500645_000495_5521_7332 543
29 3300002704 JGI25155J39150_1000052 JGI25155J39150_100005239 544
30 3300002705 JGI25156J39149_1000023 JGI25156J39149_100002339 544
31 3300002738 JGI25154J39366_1000036 JGI25154J39366_1000036119 544
32 3300002741 JGI25157J39369_1000023 JGI25157J39369_100002339 544
33 3300012513 Ga0157326_1002222 Ga0157326_10022221 544
34 3300025206 Ga0209435_100001 Ga0209435_100001365 544
35 3300025246 Ga0209646_1000001 Ga0209646_1000001734 544
36 3300025250 Ga0209026_1000003 Ga0209026_1000003365 544
37 3300025256 Ga0209759_1000001 Ga0209759_1000001365 544
38 3300025295 Ga0209564_1006197 Ga0209564_10061975 544
39 3300045051 Ga0451576_0101418 Ga0451576_0101418_1029_2720 544
40 3300044712 Ga0453684_0000401 Ga0453684_0000401_105772_107469 546
41 3300005471 Ga0070698_100000785 Ga0070698_1000007852 548
42 3300035113 Ga0373936_0000033 Ga0373936_0000033_24111_25799 548
43 3300053094 Ga0500566_0023930 Ga0500566_0023930_1533_3215 548
44 3300045051 Ga0451576_0003849 Ga0451576_0003849_975_2663 550
45 3300046471 Ga0495650_0006187 Ga0495650_0006187_5070_6758 553
46 3300031250 Ga0265331_10001772 Ga0265331_1000177214 554
47 3300031251 Ga0265327_10000012 Ga0265327_10000012334 554
48 3300046559 Ga0495667_0017513 Ga0495667_0017513_1245_3227 562
49 iso_pu_bacteria 2902682994 2902690703 565
50 iso_pu_bacteria 2919527303 2919533092 566
51 iso_pu_bacteria 2945934425 2945940944 566
52 iso_pu_bacteria 641736151 642421137 566
53 3300003354 JGI25160J50197_1000213 JGI25160J50197_100021322 569
54 3300003374 JGI25161J50226_1000015 JGI25161J50226_1000015122 569
55 3300003771 Ga0055526_1005188 Ga0055526_10051883 569
56 3300003773 Ga0055537_1000034 Ga0055537_100003418 569
57 3300003775 Ga0055524_1000016 Ga0055524_1000016126 569
58 3300003784 Ga0055534_1003533 Ga0055534_10035335 569
59 3300003790 Ga0055528_1003217 Ga0055528_10032175 569
60 3300003791 Ga0055530_10000243 Ga0055530_1000024316 569
61 3300003792 Ga0055540_1000031 Ga0055540_1000031135 569
62 3300003794 Ga0055531_10001077 Ga0055531_1000107718 569
63 3300025263 Ga0209565_1000004 Ga0209565_1000004267 569
64 3300025273 Ga0209673_1000045 Ga0209673_1000045104 569
65 3300025284 Ga0209130_1000056 Ga0209130_100005671 569
66 3300025291 Ga0209675_1000273 Ga0209675_100027311 569
67 3300025292 Ga0209676_1000007 Ga0209676_1000007807 569
68 3300025294 Ga0209025_1002684 Ga0209025_10026846 569
69 3300025295 Ga0209564_1000358 Ga0209564_100035858 569
70 3300025298 Ga0209050_1000003 Ga0209050_1000003700 569
71 3300025299 Ga0209256_1000001 Ga0209256_1000001700 569
72 3300025302 Ga0207426_1000025 Ga0207426_1000025251 569
73 3300025303 Ga0209051_1000003 Ga0209051_1000003700 569
74 3300025304 Ga0209257_1000018 Ga0209257_1000018700 569
75 3300031548 Ga0307408_100017834 Ga0307408_1000178345 569
76 3300002067 JGI24735J21928_10004298 JGI24735J21928_100042984 570
77 3300002075 JGI24738J21930_10002111 JGI24738J21930_100021112 570
78 3300025904 Ga0207647_10022577 Ga0207647_100225772 570
79 3300031911 Ga0307412_10000839 Ga0307412_1000083919 570
80 3300046454 Ga0495592_0030417 Ga0495592_0030417_124_2106 570
81 3300046511 Ga0495608_0014413 Ga0495608_0014413_2180_4162 570
82 3300046512 Ga0495610_0004158 Ga0495610_0004158_7346_9121 570
83 3300046514 Ga0495618_0007576 Ga0495618_0007576_2562_4544 570
84 3300046517 Ga0495630_0040112 Ga0495630_0040112_773_2755 570
85 3300046526 Ga0495666_0013637 Ga0495666_0013637_1157_3139 570
86 3300046529 Ga0495652_0013247 Ga0495652_0013247_3119_5101 570
87 3300046533 Ga0495640_0007739 Ga0495640_0007739_5520_7502 570
88 3300046543 Ga0495645_0038267 Ga0495645_0038267_1006_2988 570
89 3300046642 Ga0495634_0013840 Ga0495634_0013840_2753_4735 570
90 3300046663 Ga0495635_0017043 Ga0495635_0017043_854_2836 570
91 3300046680 Ga0495646_0019269 Ga0495646_0019269_159_2141 570
92 3300046809 Ga0495600_0018672 Ga0495600_0018672_138_2120 570
93 3300047315 Ga0495581_0012147 Ga0495581_0012147_2204_4186 570
94 3300047322 Ga0495680_0039979 Ga0495680_0039979_937_2919 570
95 3300048089 Ga0495614_0001722 Ga0495614_0001722_5666_7648 570
96 iso_pu_bacteria 2919704043 2919705518 571
97 iso_pu_bacteria 2511231002 2511245241 574
98 iso_pu_bacteria 2513020051 2513232073 575
99 iso_pu_bacteria 2547132374 2548498669 575
100 iso_pu_bacteria 2599185214 2599623588 575
101 iso_pu_bacteria 2599185226 2599671794 575
102 iso_pu_bacteria 2599185227 2599681193 575
103 iso_pu_bacteria 2599185229 2599693403 575
104 iso_pu_bacteria 2643221570 2643865459 575
105 iso_pu_bacteria 2643221609 2644063275 575
106 iso_pu_bacteria 2643221611 2644071758 575
107 iso_pu_bacteria 2643221652 2644296165 575
108 iso_pu_bacteria 2643221672 2644401536 575
109 iso_pu_bacteria 2643221683 2644468109 575
110 iso_pu_bacteria 2643221717 2644649401 575
111 iso_pu_bacteria 2738541277 2738717660 575
112 iso_pu_bacteria 2738541307 2738879274 575
113 iso_pu_bacteria 2738543012 2739246389 575
114 iso_pu_bacteria 2738543019 2739278346 575
115 iso_pu_bacteria 2816332133 2816475395 575
116 iso_pu_bacteria 2831265667 2831266272 575
117 iso_pu_bacteria 2838054893 2838057618 575
118 iso_pu_bacteria 2842677519 2842681943 575
119 iso_pu_bacteria 2842733646 2842735143 575
120 iso_pu_bacteria 2842747753 2842751106 575
121 iso_pu_bacteria 2885192300 2885192429 575
122 iso_pu_bacteria 2885198086 2885204386 575
123 iso_pu_bacteria 2885211737 2885218039 575
124 iso_pu_bacteria 2904449895 2904456210 575
125 iso_pu_bacteria 2904456579 2904457760 575
126 iso_pu_bacteria 2904541872 2904543441 575
127 iso_pu_bacteria 2919462493 2919467555 575
128 iso_pu_bacteria 2928070936 2928071798 575
129 iso_pu_bacteria 2928084124 2928084260 575
130 iso_pu_bacteria 2928115317 2928119646 575
131 iso_pu_bacteria 2929160207 2929163024 575
132 iso_pu_bacteria 2929520902 2929522792 575
133 iso_pu_bacteria 2945909444 2945911530 575
134 iso_pu_bacteria 2945945610 2945947659 575
135 iso_pu_bacteria 2945972063 2945977477 575
136 iso_pu_bacteria 2945984333 2945986129 575
137 iso_pu_bacteria 2954767861 2954772495 575
138 iso_pu_bacteria 2990710928 2990712046 575
139 3300031238 Ga0265332_10000128 Ga0265332_1000012824 576
140 iso_pu_bacteria 2501025502 2501080483 576
141 iso_pu_bacteria 2510917013 2511092618 576
142 iso_pu_bacteria 2513237166 2514047118 576
143 iso_pu_bacteria 2515154122 2515682323 576
144 iso_pu_bacteria 2515154189 2516019765 576
145 iso_pu_bacteria 2562617112 2563060810 576
146 iso_pu_bacteria 2582581311 2585291688 576
147 iso_pu_bacteria 2711768613 2713480291 576
148 iso_pu_bacteria 2738543013 2739251394 576
149 iso_pu_bacteria 2791355137 2792838130 576
150 iso_pu_bacteria 2816332253 2817262728 576
151 iso_pu_bacteria 2816332256 2817276200 576
152 iso_pu_bacteria 2816332286 2817453643 576
153 iso_pu_bacteria 2883087390 2883092020 576
154 iso_pu_bacteria 2885270888 2885271786 576
155 iso_pu_bacteria 2900634093 2900638413 576
156 iso_pu_bacteria 642555112 642597539 576
157 iso_pu_bacteria 642555113 642615605 576
158 iso_pu_bacteria 8020807995 8020809644 576
159 iso_pu_bacteria 8040167225 8040168532 576
160 iso_pu_bacteria 8040173305 8040178365 576
161 iso_pu_bacteria 2643221596 2643990677 577
162 iso_pu_bacteria 2721755523 2722882874 577
163 iso_pu_bacteria 2839138175 2839138405 577
164 iso_pu_bacteria 2842718218 2842722139 577
165 iso_pu_bacteria 2894023352 2894025905 577
166 iso_pu_bacteria 2974320154 2974323180 577
167 3300031456 Ga0307513_10000010 Ga0307513_10000010258 578
168 3300031730 Ga0307516_10003651 Ga0307516_100036515 578
169 3300042876 Ga0451577_0000114 Ga0451577_0000114_35278_37182 578
170 3300044712 Ga0453684_0001710 Ga0453684_0001710_35343_37247 578
171 3300045051 Ga0451576_0003831 Ga0451576_0003831_3606_5510 578
172 3300047319 Ga0495674_0032676 Ga0495674_0032676_2762_4552 578
173 3300047320 Ga0495672_0001931 Ga0495672_0001931_1480_3279 578
174 iso_pu_bacteria 2904479285 2904480281 578
175 3300002774 JGI25150J39212_1001482 JGI25150J39212_10014824 579
176 3300003187 JGI25151J46595_10013939 JGI25151J46595_100139393 579
177 3300003187 JGI25151J46595_10019536 JGI25151J46595_100195361 579
178 3300003773 Ga0055537_1000491 Ga0055537_10004917 579
179 3300003784 Ga0055534_1000450 Ga0055534_10004507 579
180 3300003790 Ga0055528_1000934 Ga0055528_10009347 579
181 3300003792 Ga0055540_1010343 Ga0055540_10103431 579
182 3300005548 Ga0070665_100005277 Ga0070665_1000052772 579
183 3300005564 Ga0070664_100024233 Ga0070664_1000242332 579
184 3300006038 Ga0075365_10001116 Ga0075365_100011168 579
185 3300006051 Ga0075364_10014395 Ga0075364_100143953 579
186 3300006353 Ga0075370_10008603 Ga0075370_100086033 579
187 3300006353 Ga0075370_10043379 Ga0075370_100433793 579
188 3300006948 Ga0099826_10000238 Ga0099826_1000023810 579
189 3300009174 Ga0105241_10094688 Ga0105241_100946882 579
190 3300014497 Ga0182008_10004746 Ga0182008_100047465 579
191 3300014969 Ga0157376_10020538 Ga0157376_100205382 579
192 3300015262 Ga0182007_10002800 Ga0182007_100028005 579
193 3300015683 Ga0183362_10001 Ga0183362_100011094 579
194 3300017792 Ga0163161_10050743 Ga0163161_100507432 579
195 3300025258 Ga0209129_1000007 Ga0209129_1000007389 579
196 3300025263 Ga0209565_1000075 Ga0209565_100007518 579
197 3300025263 Ga0209565_1000697 Ga0209565_10006977 579
198 3300025273 Ga0209673_1000133 Ga0209673_1000133147 579
199 3300025273 Ga0209673_1000304 Ga0209673_100030453 579
200 3300025273 Ga0209673_1001340 Ga0209673_100134018 579
201 3300025273 Ga0209673_1002778 Ga0209673_10027786 579
202 3300025284 Ga0209130_1000326 Ga0209130_100032653 579
203 3300025291 Ga0209675_1000074 Ga0209675_100007418 579
204 3300025291 Ga0209675_1000660 Ga0209675_10006605 579
205 3300025291 Ga0209675_1003665 Ga0209675_10036654 579
206 3300025292 Ga0209676_1000122 Ga0209676_1000122130 579
207 3300025294 Ga0209025_1000073 Ga0209025_1000073198 579
208 3300025294 Ga0209025_1006026 Ga0209025_10060267 579
209 3300025295 Ga0209564_1000524 Ga0209564_100052452 579
210 3300025295 Ga0209564_1000594 Ga0209564_100059449 579
211 3300025297 Ga0209758_1000025 Ga0209758_1000025137 579
212 3300025298 Ga0209050_1000002 Ga0209050_10000021639 579
213 3300025298 Ga0209050_1004147 Ga0209050_10041475 579
214 3300025299 Ga0209256_1000050 Ga0209256_1000050203 579
215 3300025299 Ga0209256_1000063 Ga0209256_1000063103 579
216 3300025302 Ga0207426_1000001 Ga0207426_1000001500 579
217 3300025302 Ga0207426_1000028 Ga0207426_1000028321 579
218 3300025303 Ga0209051_1000002 Ga0209051_10000021409 579
219 3300025303 Ga0209051_1000665 Ga0209051_10006651 579
220 3300025303 Ga0209051_1014966 Ga0209051_10149663 579
221 3300025304 Ga0209257_1000002 Ga0209257_10000021550 579
222 3300025728 Ga0207655_1007127 Ga0207655_10071276 579
223 3300025913 Ga0207695_10152135 Ga0207695_101521351 579
224 3300025927 Ga0207687_10025954 Ga0207687_100259542 579
225 3300025933 Ga0207706_10001871 Ga0207706_1000187118 579
226 3300025935 Ga0207709_10000830 Ga0207709_1000083019 579
227 3300025942 Ga0207689_10096174 Ga0207689_100961742 579
228 3300027665 Ga0209983_1008815 Ga0209983_10088152 579
229 3300027666 Ga0209282_1001162 Ga0209282_100116212 579
230 3300028794 Ga0307515_10000137 Ga0307515_10000137135 579
231 3300030733 Ga0314311_1086564 Ga0314311_10865643 579
232 3300030745 Ga0316182_1135218 Ga0316182_11352184 579
233 3300031251 Ga0265327_10002156 Ga0265327_100021565 579
234 3300031548 Ga0307408_100008363 Ga0307408_1000083634 579
235 3300031548 Ga0307408_100010408 Ga0307408_1000104081 579
236 3300031731 Ga0307405_10033761 Ga0307405_100337612 579
237 3300031901 Ga0307406_10007468 Ga0307406_100074684 579
238 3300039447 Ga0436361_0867198 Ga0436361_0867198_4395_6182 579
239 3300041404 Ga0439436_0000136 Ga0439436_0000136_2784_4562 579
240 3300041413 Ga0439465_0000168 Ga0439465_0000168_1197_2975 579
241 3300042006 Ga0439432_000603 Ga0439432_000603_6691_8469 579
242 3300042531 Ga0450918_000203 Ga0450918_000203_5093_6871 579
243 3300046518 Ga0495631_0001000 Ga0495631_0001000_1471_3249 579
244 3300046542 Ga0495597_0001766 Ga0495597_0001766_10546_12336 579
245 3300046558 Ga0495633_0005073 Ga0495633_0005073_5413_7191 579
246 3300046615 Ga0495656_0001920 Ga0495656_0001920_1640_3418 579
247 3300047319 Ga0495674_0043180 Ga0495674_0043180_1311_3185 579
248 3300048907 Ga0496104_0000688 Ga0496104_0000688_4308_6086 579
249 3300048911 Ga0496108_0052578 Ga0496108_0052578_1015_2793 579
250 3300048913 Ga0496110_0022320 Ga0496110_0022320_886_2664 579
251 3300048919 Ga0496116_0026386 Ga0496116_0026386_289_2067 579
252 3300049759 Ga0501262_000481 Ga0501262_000481_1464_3242 579
253 3300049763 Ga0501266_002897 Ga0501266_002897_132_1916 579
254 3300053087 Ga0500643_011948 Ga0500643_011948_672_2450 579
255 3300053121 Ga0500607_002946 Ga0500607_002946_687_2465 579
256 3300053134 Ga0500658_0002913 Ga0500658_0002913_1952_3730 579
257 3300053153 Ga0500616_0054622 Ga0500616_0054622_140_1918 579
258 3300002705 JGI25156J39149_1000131 JGI25156J39149_100013156 580
259 3300003354 JGI25160J50197_1000029 JGI25160J50197_100002993 580
260 3300005262 Ga0065165_1000040 Ga0065165_1000040105 580
261 3300005335 Ga0070666_10008740 Ga0070666_100087405 580
262 3300014497 Ga0182008_10000400 Ga0182008_100004006 580
263 3300025256 Ga0209759_1000217 Ga0209759_100021757 580
264 3300025284 Ga0209130_1001865 Ga0209130_10018651 580
265 3300025284 Ga0209130_1004306 Ga0209130_10043064 580
266 3300025291 Ga0209675_1002591 Ga0209675_10025915 580
267 3300025295 Ga0209564_1005508 Ga0209564_10055087 580
268 3300025298 Ga0209050_1016722 Ga0209050_10167222 580
269 3300025302 Ga0207426_1000004 Ga0207426_1000004783 580
270 3300025903 Ga0207680_10015207 Ga0207680_100152072 580
271 3300025941 Ga0207711_10019449 Ga0207711_100194495 580
272 3300028800 Ga0265338_10000045 Ga0265338_10000045174 580
273 3300028800 Ga0265338_10000239 Ga0265338_100002399 580
274 3300037471 Ga0395905_0000035 Ga0395905_0000035_68891_70681 580
275 3300046455 Ga0495603_0016270 Ga0495603_0016270_2494_4284 580
276 3300046459 Ga0495629_0000023 Ga0495629_0000023_39315_41105 580
277 3300046460 Ga0495638_0001265 Ga0495638_0001265_12495_14282 580
278 3300046463 Ga0495653_0000234 Ga0495653_0000234_20056_21846 580
279 3300046471 Ga0495650_0006875 Ga0495650_0006875_2514_4304 580
280 3300046474 Ga0495605_0004888 Ga0495605_0004888_862_2649 580
281 3300046474 Ga0495605_0023205 Ga0495605_0023205_759_2549 580
282 3300046506 Ga0495583_0003201 Ga0495583_0003201_8667_10457 580
283 3300046515 Ga0495620_0008813 Ga0495620_0008813_2202_3992 580
284 3300046516 Ga0495628_0006415 Ga0495628_0006415_3606_5396 580
285 3300046517 Ga0495630_0021928 Ga0495630_0021928_2570_4360 580
286 3300046524 Ga0495648_0045302 Ga0495648_0045302_820_2610 580
287 3300046680 Ga0495646_0006357 Ga0495646_0006357_857_2647 580
288 3300046684 Ga0495669_0002004 Ga0495669_0002004_2144_3931 580
289 3300046689 Ga0495613_0026348 Ga0495613_0026348_1280_3070 580
290 3300046690 Ga0495624_0007731 Ga0495624_0007731_2479_4269 580
291 3300047317 Ga0495604_0001443 Ga0495604_0001443_14798_16588 580
292 3300047319 Ga0495674_0015089 Ga0495674_0015089_1212_3002 580
293 3300047320 Ga0495672_0011760 Ga0495672_0011760_1796_3586 580
294 3300047322 Ga0495680_0056369 Ga0495680_0056369_741_2531 580
295 3300047444 Ga0495675_0009196 Ga0495675_0009196_2826_4616 580
296 3300047446 Ga0495679_000009 Ga0495679_000009_2717_4507 580
297 3300047446 Ga0495679_012219 Ga0495679_012219_1149_2939 580
298 3300047472 Ga0495686_0012278 Ga0495686_0012278_2728_4518 580
299 3300048088 Ga0495602_0016356 Ga0495602_0016356_4663_6453 580
300 3300048091 Ga0495626_0015835 Ga0495626_0015835_1175_2965 580
301 3300048903 Ga0496100_0000969 Ga0496100_0000969_8627_10417 580
302 3300048904 Ga0496101_0000134 Ga0496101_0000134_3176_4966 580
303 3300048905 Ga0496102_0000181 Ga0496102_0000181_32492_34282 580
304 3300048906 Ga0496103_0004132 Ga0496103_0004132_2204_3994 580
305 3300048909 Ga0496106_0042087 Ga0496106_0042087_1369_3159 580
306 3300048920 Ga0496117_0004049 Ga0496117_0004049_2342_4132 580
307 3300048921 Ga0496118_0000135 Ga0496118_0000135_43625_45415 580
308 3300048921 Ga0496118_0052974 Ga0496118_0052974_557_2347 580
309 3300048924 Ga0496121_0000361 Ga0496121_0000361_15075_16865 580
310 3300048925 Ga0496122_0000034 Ga0496122_0000034_18410_20203 580
311 3300048926 Ga0496123_0000069 Ga0496123_0000069_155271_157064 580
312 3300048927 Ga0496124_0055974 Ga0496124_0055974_868_2658 580
313 iso_pu_bacteria 2513237082 2513556258 580
314 iso_pu_bacteria 2513237083 2513565779 580
315 iso_pu_bacteria 2904615490 2904616829 580
316 iso_pu_bacteria 8003955200 8003959353 580
317 3300009148 Ga0105243_10012744 Ga0105243_100127441 581
318 3300025935 Ga0207709_10000207 Ga0207709_1000020756 581
319 3300027111 Ga0209281_1000067 Ga0209281_1000067124 581
320 3300046471 Ga0495650_0023702 Ga0495650_0023702_895_2694 581
321 3300045051 Ga0451576_0058249 Ga0451576_0058249_1792_3708 583
322 3300002067 JGI24735J21928_10000347 JGI24735J21928_100003479 585
323 3300009011 Ga0105251_10000117 Ga0105251_1000011749 585
324 3300025302 Ga0207426_1002162 Ga0207426_10021629 585
325 3300025735 Ga0207713_1007710 Ga0207713_10077104 585
326 3300046457 Ga0495590_0001073 Ga0495590_0001073_995_2752 585
327 3300046542 Ga0495597_0018949 Ga0495597_0018949_1030_2787 585
328 3300048903 Ga0496100_0000467 Ga0496100_0000467_5099_6856 585
329 3300048904 Ga0496101_0001244 Ga0496101_0001244_2551_4308 585
330 3300048906 Ga0496103_0000772 Ga0496103_0000772_18636_20393 585
331 3300048913 Ga0496110_0011222 Ga0496110_0011222_3666_5423 585
332 3300048914 Ga0496111_0004270 Ga0496111_0004270_402_2159 585
333 3300048915 Ga0496112_0001094 Ga0496112_0001094_4183_5940 585
334 3300048919 Ga0496116_0018605 Ga0496116_0018605_1772_3529 585
335 3300048921 Ga0496118_0026575 Ga0496118_0026575_1750_3507 585
336 3300048924 Ga0496121_0018270 Ga0496121_0018270_4290_6047 585
337 3300048925 Ga0496122_0049438 Ga0496122_0049438_438_2195 585
338 3300048926 Ga0496123_0006895 Ga0496123_0006895_583_2340 585
339 3300048927 Ga0496124_0012324 Ga0496124_0012324_5150_6907 585
340 3300048928 Ga0496125_0039250 Ga0496125_0039250_325_2082 585

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01077

NIR_SIR

Nitrite and sulphite reductase 4Fe-4S domain

145

300

0.94

PF03460

NIR_SIR_ferr

Nitrite/Sulfite reductase ferredoxin-like half domain

361

425

0.93

PF03460

NIR_SIR_ferr

Nitrite/Sulfite reductase ferredoxin-like half domain

48

85

0.92

PF01077

NIR_SIR

Nitrite and sulphite reductase 4Fe-4S domain

434

583

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zj9-assembly2.cif.gz_B structure of mycobacterium tuberculosis nira protein 0.8045 31 570
3b0l-assembly1.cif.gz_A m175g mutant of assimilatory nitrite reductase (nii3) from tobbaco leaf 0.7976 41 550
6c3z-assembly1.cif.gz_A t477a sirhp 0.7904 54 567
6c3x-assembly1.cif.gz_A wild type structure of sirhp 0.7847 55 567
2akj-assembly1.cif.gz_A structure of spinach nitrite reductase 0.7823 17 546
ID Description Score Start End Superfamily
af_Q9LZ66_121_190_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.9081 381 421 3.90.480.10
af_P08201_639_761_3.30.413.10 Alpha Beta;2-Layer Sandwich;Sulfite Reductase Hemoprotein; domain 1;Sulfite Reductase Hemoprotein, domain 1 0.8746 438 563 3.30.413.10
af_P17846_72_140_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.8743 53 133 3.90.480.10
af_P47169_904_971_3.90.480.10 Alpha Beta;Alpha-Beta Complex;Sulfite Reductase Hemoprotein; domain 2;Sulfite Reductase Hemoprotein;Domain 2 0.8639 46 133 3.90.480.10
af_Q2FVL8_631_763_3.30.413.10 Alpha Beta;2-Layer Sandwich;Sulfite Reductase Hemoprotein; domain 1;Sulfite Reductase Hemoprotein, domain 1 0.8593 438 582 3.30.413.10
ID Description Score Start End GO Terms
AF-A0A7S1EJ32-F1-model_v4 Nitrite/Sulfite reductase ferredoxin-like domain-containing protein 0.9905 340 441 GO:0016491
AF-A0A4Q3Q2Z1-F1-model_v4 deleted 0.9893 1 133
AF-A0A4Q6D8P3-F1-model_v4 deleted 0.9779 360 575
AF-A0A6P2QQL0-F1-model_v4 Nitrite reductase 0.9776 1 582 GO:0000103
GO:0009337
GO:0016002
GO:0020037
GO:0046872
GO:0050311
GO:0051539
AF-A0A519HFK4-F1-model_v4 Nitrite/sulfite reductase 0.9764 336 584 GO:0000103
GO:0009337
GO:0016002
GO:0020037
GO:0046872
GO:0050311
GO:0051539

Feature Viewer

pLDDT pTM Quality
90.51 0.91 High
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Predicted Structure (AlphaFold2)

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