F412783

General Info

Members Datasets Scaffolds Average Seq Length
336 195 672 150

Family's Representative Sequence

Representative Sequence 3300046471|Ga0495650_0000006|Ga0495650_0000006_214021_214515
Length 164
Sequence LQRRLTDNNNYHLLALVQTSPSVEAHSFRELCANHGLTATHQRQVLYEVMKTMPGHPSPEEVYARVKKRIPAISLATVYKNIHLFVERGVLKEVSMHHGSLRVELNGHRHHHMVCSQCKAITDIEEEDLDFLPTTRQLPGGFQVERYAIDVIGICAACQEEKSS

Samples

Sample ID Description Type Environment
1 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
71 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
111 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
116 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
117 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
118 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
119 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
120 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
124 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
125 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
126 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
127 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
128 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
131 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
132 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
133 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
136 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
139 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
140 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
141 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
142 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
143 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
146 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
147 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
148 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
149 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
150 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
154 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
157 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
158 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
168 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
184 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
185 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
186 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
189 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
192 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
193 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.7
Metatranscriptomes 0
Isolates 0.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.38
Nodule 0
Rhizoplane 4.46
Rhizosphere 88.1
Stem 0
Stem Tuber 0
Unclassified 12.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495650_0000006 3300046471 Bacteria 721347
2 JGI24736J21556_1043868 3300001904 Bacteria 687
3 JGI25165J46597_1051814 3300003214 Bacteria 526
4 rootH1_10041565 3300003316 Bacteria 5545
5 rootH2_10004754 3300003320 Unclassified 1064
6 rootH2_10146661 3300003320 Bacteria 2652
7 rootL2_10005403 3300003322 Bacteria 2017
8 rootH1_10238902 3300003323 Bacteria 1674
9 rootH1_10327074 3300003323 Bacteria 1845
10 rootH1_10339016 3300003323 Bacteria 2254
11 Ga0065715_10618471 3300005293 Unclassified 697
12 Ga0070658_10191769 3300005327 Bacteria 1722
13 Ga0070658_10662816 3300005327 Bacteria 905
14 Ga0070658_10722557 3300005327 Bacteria 865
15 Ga0068869_100008247 3300005334 Bacteria 6709
16 Ga0070666_10799643 3300005335 Bacteria 694
17 Ga0070680_101028834 3300005336 Bacteria 711
18 Ga0070660_100216137 3300005339 Bacteria 1557
19 Ga0070660_101107918 3300005339 Bacteria 670
20 Ga0070660_101524524 3300005339 Bacteria 568
21 Ga0070691_10525536 3300005341 Bacteria 688
22 Ga0070687_100375928 3300005343 Unclassified 924
23 Ga0070661_100005970 3300005344 Bacteria 8383
24 Ga0070661_100115448 3300005344 Bacteria 2008
25 Ga0070661_100336662 3300005344 Bacteria 1181
26 Ga0070669_100447381 3300005353 Bacteria 1064
27 Ga0070671_100233445 3300005355 Bacteria 1561
28 Ga0070688_100373434 3300005365 Unclassified 1049
29 Ga0070659_100524522 3300005366 Bacteria 1011
30 Ga0070659_100865438 3300005366 Bacteria 788
31 Ga0070659_101832666 3300005366 Unclassified 544
32 Ga0070714_100710079 3300005435 Bacteria 970
33 Ga0070714_100768431 3300005435 Unclassified 932
34 Ga0070714_101783647 3300005435 Bacteria 601
35 Ga0070710_10204949 3300005437 Bacteria 1247
36 Ga0070711_100934279 3300005439 Unclassified 742
37 Ga0070705_100041810 3300005440 Bacteria 2616
38 Ga0070663_100009223 3300005455 Bacteria 6104
39 Ga0070663_100300010 3300005455 Bacteria 1286
40 Ga0070662_100235832 3300005457 Bacteria 1465
41 Ga0070681_10574676 3300005458 Bacteria 1041
42 Ga0070681_11473392 3300005458 Unclassified 605
43 Ga0068867_100022424 3300005459 Bacteria 4515
44 Ga0070679_100083300 3300005530 Bacteria 3187
45 Ga0070679_100098761 3300005530 Bacteria 2907
46 Ga0070679_100517973 3300005530 Bacteria 1136
47 Ga0070684_100664068 3300005535 Bacteria 971
48 Ga0068853_100021311 3300005539 Bacteria 5402
49 Ga0068853_100225725 3300005539 Bacteria 1712
50 Ga0070672_100996955 3300005543 Bacteria 742
51 Ga0070665_100282388 3300005548 Bacteria 1662
52 Ga0070665_100748300 3300005548 Bacteria 990
53 Ga0070665_100868461 3300005548 Bacteria 915
54 Ga0068855_100006646 3300005563 Bacteria 14047
55 Ga0068855_100008407 3300005563 Bacteria 12482
56 Ga0068855_100010326 3300005563 Bacteria 11261
57 Ga0068855_100198856 3300005563 Bacteria 2257
58 Ga0068855_100308867 3300005563 Bacteria 1750
59 Ga0068854_100141304 3300005578 Bacteria 1848
60 Ga0068856_100002910 3300005614 Bacteria 17524
61 Ga0068856_100016266 3300005614 Bacteria 7197
62 Ga0068856_100480183 3300005614 Bacteria 1264
63 Ga0068856_100503353 3300005614 Bacteria 1232
64 Ga0068856_100798093 3300005614 Bacteria 964
65 Ga0070702_100045555 3300005615 Bacteria 2482
66 Ga0068852_100397663 3300005616 Bacteria 1355
67 Ga0068852_100469984 3300005616 Bacteria 1248
68 Ga0068852_100481706 3300005616 Bacteria 1233
69 Ga0068852_102035024 3300005616 Unclassified 596
70 Ga0068866_10014564 3300005718 Bacteria 3476
71 Ga0068851_10568917 3300005834 Bacteria 687
72 Ga0068870_10003275 3300005840 Bacteria 6841
73 Ga0068863_100066856 3300005841 Bacteria 3400
74 Ga0068860_100034753 3300005843 Bacteria 4836
75 Ga0070717_10068498 3300006028 Bacteria 2954
76 Ga0070712_101073125 3300006175 Unclassified 698
77 Ga0068871_101138814 3300006358 Unclassified 730
78 Ga0068865_100113564 3300006881 Bacteria 2002
79 Ga0068865_100771286 3300006881 Bacteria 827
80 Ga0105240_10033131 3300009093 Bacteria 6678
81 Ga0105240_10508408 3300009093 Bacteria 1339
82 Ga0105240_10531120 3300009093 Bacteria 1304
83 Ga0105240_10610204 3300009093 Bacteria 1200
84 Ga0105241_10116759 3300009174 Unclassified 2143
85 Ga0105241_10297262 3300009174 Bacteria 1384
86 Ga0105241_10634292 3300009174 Bacteria 969
87 Ga0105242_12256142 3300009176 Unclassified 590
88 Ga0105248_10055238 3300009177 Bacteria 4453
89 Ga0105248_10153166 3300009177 Bacteria 2601
90 Ga0105248_10441013 3300009177 Bacteria 1467
91 Ga0105248_11107516 3300009177 Bacteria 895
92 Ga0105237_10119222 3300009545 Bacteria 2632
93 Ga0105237_10446564 3300009545 Bacteria 1299
94 Ga0105237_10733921 3300009545 Bacteria 994
95 Ga0105237_10918577 3300009545 Bacteria 882
96 Ga0105238_10025345 3300009551 Bacteria 6045
97 Ga0105238_10025604 3300009551 Bacteria 6015
98 Ga0105238_10431895 3300009551 Bacteria 1313
99 Ga0105238_11509529 3300009551 Unclassified 701
100 Ga0099796_10243901 3300010159 Bacteria 744
101 Ga0105239_11056260 3300010375 Bacteria 934
102 Ga0157373_10265136 3300013100 Unclassified 1216
103 Ga0157373_10921703 3300013100 Bacteria 649
104 Ga0157371_10184987 3300013102 Bacteria 1491
105 Ga0157371_10970365 3300013102 Bacteria 647
106 Ga0157370_10014722 3300013104 Bacteria 7986
107 Ga0157370_10018706 3300013104 Bacteria 6966
108 Ga0157370_10112916 3300013104 Bacteria 2539
109 Ga0157370_10562367 3300013104 Bacteria 1045
110 Ga0157369_10046299 3300013105 Bacteria 4727
111 Ga0157369_10060962 3300013105 Bacteria 4067
112 Ga0157369_10117829 3300013105 Bacteria 2819
113 Ga0157369_10143557 3300013105 Bacteria 2525
114 Ga0157369_10204758 3300013105 Bacteria 2070
115 Ga0157369_10240574 3300013105 Bacteria 1891
116 Ga0157369_10259403 3300013105 Bacteria 1813
117 Ga0157369_11639033 3300013105 Bacteria 654
118 Ga0157369_11947794 3300013105 Bacteria 596
119 Ga0157369_12689258 3300013105 Bacteria 501
120 Ga0157374_10020053 3300013296 Bacteria 5928
121 Ga0157374_10037953 3300013296 Bacteria 4425
122 Ga0157374_10092233 3300013296 Bacteria 2890
123 Ga0163162_10007671 3300013306 Bacteria 10507
124 Ga0163162_10115486 3300013306 Bacteria 2784
125 Ga0163162_12535380 3300013306 Bacteria 590
126 Ga0157372_10009330 3300013307 Bacteria 10440
127 Ga0157372_10092562 3300013307 Bacteria 3439
128 Ga0157372_10107972 3300013307 Bacteria 3185
129 Ga0157372_10529411 3300013307 Bacteria 1374
130 Ga0157372_11056391 3300013307 Bacteria 940
131 Ga0157372_11414453 3300013307 Unclassified 802
132 Ga0157372_11535458 3300013307 Bacteria 767
133 Ga0157372_13389787 3300013307 Bacteria 507
134 Ga0163163_10048274 3300014325 Unclassified 4186
135 Ga0157380_11606059 3300014326 Unclassified 706
136 Ga0157379_10035323 3300014968 Bacteria 4457
137 Ga0157379_10613233 3300014968 Bacteria 1016
138 Ga0157376_10183477 3300014969 Unclassified 1914
139 Ga0157376_10263260 3300014969 Bacteria 1616
140 Ga0157376_10403843 3300014969 Bacteria 1322
141 Ga0157376_10484208 3300014969 Bacteria 1213
142 Ga0157376_11032759 3300014969 Bacteria 846
143 Ga0213872_10003671 3300021361 Bacteria 8406
144 Ga0209437_103772 3300025233 Bacteria 2705
145 Ga0209233_1004748 3300025261 Bacteria 4585
146 Ga0209233_1033681 3300025261 Bacteria 1174
147 Ga0207426_1057735 3300025302 Bacteria 1128
148 Ga0207656_10395481 3300025321 Bacteria 694
149 Ga0207680_10538658 3300025903 Bacteria 833
150 Ga0207647_10036611 3300025904 Bacteria 3117
151 Ga0207647_10078457 3300025904 Bacteria 1983
152 Ga0207647_10338113 3300025904 Bacteria 853
153 Ga0207705_10005431 3300025909 Bacteria 9532
154 Ga0207705_10007857 3300025909 Bacteria 7834
155 Ga0207705_10026023 3300025909 Bacteria 4175
156 Ga0207705_11420825 3300025909 Unclassified 527
157 Ga0207684_11031832 3300025910 Unclassified 687
158 Ga0207654_10179844 3300025911 Bacteria 1379
159 Ga0207707_10418411 3300025912 Bacteria 1149
160 Ga0207695_10000242 3300025913 Bacteria 142011
161 Ga0207695_10008987 3300025913 Bacteria 12433
162 Ga0207695_10425632 3300025913 Bacteria 1212
163 Ga0207671_10034793 3300025914 Bacteria 3742
164 Ga0207693_10139282 3300025915 Bacteria 1908
165 Ga0207693_10267047 3300025915 Unclassified 1341
166 Ga0207693_10777758 3300025915 Bacteria 738
167 Ga0207663_10819265 3300025916 Unclassified 742
168 Ga0207660_10190165 3300025917 Unclassified 1598
169 Ga0207660_10699674 3300025917 Bacteria 827
170 Ga0207657_10011638 3300025919 Bacteria 8723
171 Ga0207657_10342566 3300025919 Unclassified 1180
172 Ga0207657_10862658 3300025919 Bacteria 698
173 Ga0207649_10801327 3300025920 Bacteria 735
174 Ga0207652_10004929 3300025921 Bacteria 10802
175 Ga0207652_10119669 3300025921 Bacteria 2342
176 Ga0207652_10301636 3300025921 Unclassified 1446
177 Ga0207652_10317677 3300025921 Bacteria 1406
178 Ga0207652_10343415 3300025921 Bacteria 1348
179 Ga0207681_10251807 3300025923 Bacteria 1379
180 Ga0207694_10070277 3300025924 Bacteria 2735
181 Ga0207694_10167567 3300025924 Unclassified 1777
182 Ga0207694_10179876 3300025924 Bacteria 1715
183 Ga0207694_10767188 3300025924 Bacteria 814
184 Ga0207664_10334956 3300025929 Bacteria 1337
185 Ga0207664_11449338 3300025929 Bacteria 608
186 Ga0207644_11315683 3300025931 Unclassified 607
187 Ga0207690_10630205 3300025932 Bacteria 877
188 Ga0207690_11480479 3300025932 Unclassified 568
189 Ga0207706_10137507 3300025933 Unclassified 2149
190 Ga0207686_10423734 3300025934 Unclassified 1018
191 Ga0207704_10181776 3300025938 Bacteria 1520
192 Ga0207691_11359195 3300025940 Bacteria 585
193 Ga0207711_10579440 3300025941 Unclassified 1047
194 Ga0207661_10042536 3300025944 Bacteria 3582
195 Ga0207679_10020279 3300025945 Bacteria 4484
196 Ga0207667_10028978 3300025949 Bacteria 6009
197 Ga0207667_10039337 3300025949 Bacteria 5041
198 Ga0207667_10051426 3300025949 Bacteria 4344
199 Ga0207667_10484784 3300025949 Bacteria 1255
200 Ga0207667_12016549 3300025949 Bacteria 537
201 Ga0207668_10565220 3300025972 Bacteria 987
202 Ga0207640_10007276 3300025981 Bacteria 6108
203 Ga0207639_10141046 3300026041 Bacteria 2008
204 Ga0207639_10159472 3300026041 Bacteria 1899
205 Ga0207678_10005236 3300026067 Bacteria 11617
206 Ga0207678_10812231 3300026067 Unclassified 826
207 Ga0207678_11963445 3300026067 Bacteria 510
208 Ga0207702_10019394 3300026078 Bacteria 5627
209 Ga0207702_10033769 3300026078 Bacteria 4274
210 Ga0207702_10336895 3300026078 Bacteria 1440
211 Ga0207702_10357643 3300026078 Bacteria 1399
212 Ga0207702_10385335 3300026078 Unclassified 1349
213 Ga0207702_11400849 3300026078 Bacteria 693
214 Ga0207702_11750219 3300026078 Bacteria 614
215 Ga0207641_10378941 3300026088 Bacteria 1354
216 Ga0207648_10098143 3300026089 Unclassified 2564
217 Ga0207683_10561967 3300026121 Bacteria 1055
218 Ga0207698_10148547 3300026142 Bacteria 2030
219 Ga0207698_10204011 3300026142 Bacteria 1773
220 Ga0207698_10339475 3300026142 Bacteria 1414
221 Ga0268266_10014688 3300028379 Bacteria 6727
222 Ga0268266_10083146 3300028379 Unclassified 2794
223 Ga0268266_10387510 3300028379 Bacteria 1319
224 Ga0268264_10040852 3300028381 Bacteria 3833
225 Ga0268264_10881078 3300028381 Bacteria 898
226 Ga0316583_10104637 3300032133 Bacteria 987
227 Ga0307510_10059362 3300033180 Bacteria 3951
228 Ga0395900_0098460 3300037418 Bacteria 3005
229 Ga0395900_0285831 3300037418 Bacteria 1640
230 Ga0395900_1449845 3300037418 Bacteria 599
231 Ga0436365_0368930 3300039437 Bacteria 1027
232 Ga0436361_1039054 3300039447 Bacteria 7096
233 Ga0439448_0047585 3300042005 Bacteria 1399
234 Ga0466965_0308424 3300044683 Unclassified 860
235 Ga0466966_0071601 3300044684 Unclassified 2172
236 Ga0466964_0124311 3300044706 Bacteria 1167
237 Ga0466971_0180270 3300044719 Unclassified 993
238 Ga0466957_0162057 3300044842 Bacteria 1453
239 Ga0466959_0396429 3300045049 Unclassified 938
240 Ga0466967_0155911 3300045976 Bacteria 2139
241 Ga0495617_053325 3300046452 Bacteria 1343
242 Ga0495590_0104552 3300046457 Bacteria 1008
243 Ga0495638_0172724 3300046460 Bacteria 1239
244 Ga0495651_0290346 3300046462 Bacteria 1101
245 Ga0495650_0001676 3300046471 Bacteria 20468
246 Ga0495580_0025649 3300046472 Bacteria 4308
247 Ga0495580_0027428 3300046472 Bacteria 4144
248 Ga0495605_0196071 3300046474 Bacteria 882
249 Ga0495585_0005957 3300046492 Bacteria 7627
250 Ga0495594_0010696 3300046499 Bacteria 4760
251 Ga0495596_0017402 3300046500 Bacteria 2976
252 Ga0495607_0171077 3300046501 Bacteria 1097
253 Ga0495583_0021210 3300046506 Bacteria 3347
254 Ga0495583_0084692 3300046506 Bacteria 1373
255 Ga0495606_0223648 3300046507 Bacteria 1059
256 Ga0495608_0258430 3300046511 Bacteria 1085
257 Ga0495631_0017580 3300046518 Bacteria 3379
258 Ga0495643_0111972 3300046522 Bacteria 1387
259 Ga0495644_0000057 3300046523 Bacteria 54280
260 Ga0495648_0015743 3300046524 Bacteria 5474
261 Ga0495652_0037871 3300046529 Bacteria 4182
262 Ga0495652_0194980 3300046529 Bacteria 1543
263 Ga0495645_0287089 3300046543 Bacteria 1080
264 Ga0495668_0579778 3300046616 Bacteria 619
265 Ga0495611_0066779 3300046648 Bacteria 1641
266 Ga0495625_0002015 3300046660 Bacteria 22892
267 Ga0495625_0102246 3300046660 Bacteria 1967
268 Ga0495625_0144365 3300046660 Bacteria 1603
269 Ga0495669_0007416 3300046684 Bacteria 4600
270 Ga0495670_0075570 3300046691 Bacteria 1710
271 Ga0495671_0044687 3300046692 Bacteria 2220
272 Ga0495649_0003833 3300046694 Bacteria 9956
273 Ga0495589_0200417 3300046794 Bacteria 942
274 Ga0495672_0003212 3300047320 Bacteria 14209
275 Ga0495687_019297 3300047443 Bacteria 3351
276 Ga0495675_0052926 3300047444 Bacteria 2577
277 Ga0495673_0194091 3300047469 Bacteria 763
278 Ga0495681_0091543 3300047470 Bacteria 1342
279 Ga0495686_0000064 3300047472 Bacteria 226284
280 Ga0495686_0001426 3300047472 Bacteria 26137
281 Ga0495686_0012105 3300047472 Bacteria 6055
282 Ga0495686_0068254 3300047472 Bacteria 2194
283 Ga0495686_0103390 3300047472 Bacteria 1716
284 Ga0496100_0411171 3300048903 Bacteria 1032
285 Ga0496100_1325954 3300048903 Bacteria 568
286 Ga0496101_0267989 3300048904 Bacteria 1333
287 Ga0496102_0048225 3300048905 Unclassified 3872
288 Ga0496104_0000027 3300048907 Bacteria 203475
289 Ga0496104_0072312 3300048907 Bacteria 3279
290 Ga0496105_0183526 3300048908 Bacteria 1712
291 Ga0496108_0043396 3300048911 Bacteria 3756
292 Ga0496110_0138861 3300048913 Bacteria 2197
293 Ga0496112_0227425 3300048915 Bacteria 1820
294 Ga0496112_1503940 3300048915 Bacteria 587
295 Ga0496113_0019506 3300048916 Bacteria 4745
296 Ga0496114_0163199 3300048917 Bacteria 1939
297 Ga0496115_0049830 3300048918 Bacteria 3353
298 Ga0496115_0563903 3300048918 Bacteria 909
299 Ga0496119_0091301 3300048922 Bacteria 1730
300 Ga0496120_0159935 3300048923 Bacteria 1124
301 Ga0496121_0277301 3300048924 Bacteria 1149
302 Ga0496126_0000020 3300048929 Bacteria 490805
303 Ga0496126_0000063 3300048929 Bacteria 256841
304 Ga0496126_0016126 3300048929 Bacteria 7487
305 Ga0496126_0905248 3300048929 Bacteria 669
306 Ga0496126_1283410 3300048929 Unclassified 534
307 Ga0495682_0041420 3300049460 Bacteria 1688
308 Ga0495682_0110117 3300049460 Bacteria 987
309 Ga0501032_0001934 3300049569 Bacteria 16324
310 Ga0501033_0006143 3300049570 Bacteria 9419
311 Ga0501034_0012295 3300049571 Bacteria 8844
312 Ga0501036_0020758 3300049572 Bacteria 5517
313 Ga0501037_0004846 3300049573 Bacteria 9790
314 Ga0501038_0005213 3300049574 Bacteria 12096
315 Ga0501040_0408514 3300049576 Bacteria 975
316 Ga0501043_0001698 3300049579 Bacteria 19072
317 Ga0501043_0644121 3300049579 Bacteria 779
318 Ga0501046_0000278 3300049580 Bacteria 51928
319 Ga0501047_0000362 3300049581 Bacteria 51540
320 Ga0501048_0111241 3300049582 Bacteria 1934
321 Ga0501068_1134313 3300049584 Bacteria 517
322 Ga0501069_0394810 3300049585 Bacteria 818
323 Ga0501069_0518099 3300049585 Bacteria 712
324 Ga0501070_0466595 3300049586 Bacteria 1017
325 Ga0501073_0007223 3300049589 Bacteria 8268
326 Ga0501074_0100521 3300049590 Bacteria 2070
327 Ga0501079_0244548 3300049741 Bacteria 1402
328 Ga0501035_0002831 3300049822 Bacteria 16769
329 Ga0501035_0209682 3300049822 Bacteria 1667
330 Ga0501044_0007766 3300049823 Bacteria 11794
331 Ga0501044_0337562 3300049823 Bacteria 1428
332 Ga0500554_115339 3300053102 Bacteria 904
333 Ga0500595_067953 3300053119 Bacteria 1062
334 Ga0500559_0117581 3300053136 Bacteria 1235
335 Ga0501082_0963607 3300060353 Bacteria 746
336 2884215935 2884215851 Bacteria 4554841
337 Ga0495650_0000006
338 JGI24736J21556_1043868
339 JGI25165J46597_1051814
340 rootH1_10041565
341 rootH2_10004754
342 rootH2_10146661
343 rootL2_10005403
344 rootH1_10238902
345 rootH1_10327074
346 rootH1_10339016
347 Ga0065715_10618471
348 Ga0070658_10191769
349 Ga0070658_10662816
350 Ga0070658_10722557
351 Ga0068869_100008247
352 Ga0070666_10799643
353 Ga0070680_101028834
354 Ga0070660_100216137
355 Ga0070660_101107918
356 Ga0070660_101524524
357 Ga0070691_10525536
358 Ga0070687_100375928
359 Ga0070661_100005970
360 Ga0070661_100115448
361 Ga0070661_100336662
362 Ga0070669_100447381
363 Ga0070671_100233445
364 Ga0070688_100373434
365 Ga0070659_100524522
366 Ga0070659_100865438
367 Ga0070659_101832666
368 Ga0070714_100710079
369 Ga0070714_100768431
370 Ga0070714_101783647
371 Ga0070710_10204949
372 Ga0070711_100934279
373 Ga0070705_100041810
374 Ga0070663_100009223
375 Ga0070663_100300010
376 Ga0070662_100235832
377 Ga0070681_10574676
378 Ga0070681_11473392
379 Ga0068867_100022424
380 Ga0070679_100083300
381 Ga0070679_100098761
382 Ga0070679_100517973
383 Ga0070684_100664068
384 Ga0068853_100021311
385 Ga0068853_100225725
386 Ga0070672_100996955
387 Ga0070665_100282388
388 Ga0070665_100748300
389 Ga0070665_100868461
390 Ga0068855_100006646
391 Ga0068855_100008407
392 Ga0068855_100010326
393 Ga0068855_100198856
394 Ga0068855_100308867
395 Ga0068854_100141304
396 Ga0068856_100002910
397 Ga0068856_100016266
398 Ga0068856_100480183
399 Ga0068856_100503353
400 Ga0068856_100798093
401 Ga0070702_100045555
402 Ga0068852_100397663
403 Ga0068852_100469984
404 Ga0068852_100481706
405 Ga0068852_102035024
406 Ga0068866_10014564
407 Ga0068851_10568917
408 Ga0068870_10003275
409 Ga0068863_100066856
410 Ga0068860_100034753
411 Ga0070717_10068498
412 Ga0070712_101073125
413 Ga0068871_101138814
414 Ga0068865_100113564
415 Ga0068865_100771286
416 Ga0105240_10033131
417 Ga0105240_10508408
418 Ga0105240_10531120
419 Ga0105240_10610204
420 Ga0105241_10116759
421 Ga0105241_10297262
422 Ga0105241_10634292
423 Ga0105242_12256142
424 Ga0105248_10055238
425 Ga0105248_10153166
426 Ga0105248_10441013
427 Ga0105248_11107516
428 Ga0105237_10119222
429 Ga0105237_10446564
430 Ga0105237_10733921
431 Ga0105237_10918577
432 Ga0105238_10025345
433 Ga0105238_10025604
434 Ga0105238_10431895
435 Ga0105238_11509529
436 Ga0099796_10243901
437 Ga0105239_11056260
438 Ga0157373_10265136
439 Ga0157373_10921703
440 Ga0157371_10184987
441 Ga0157371_10970365
442 Ga0157370_10014722
443 Ga0157370_10018706
444 Ga0157370_10112916
445 Ga0157370_10562367
446 Ga0157369_10046299
447 Ga0157369_10060962
448 Ga0157369_10117829
449 Ga0157369_10143557
450 Ga0157369_10204758
451 Ga0157369_10240574
452 Ga0157369_10259403
453 Ga0157369_11639033
454 Ga0157369_11947794
455 Ga0157369_12689258
456 Ga0157374_10020053
457 Ga0157374_10037953
458 Ga0157374_10092233
459 Ga0163162_10007671
460 Ga0163162_10115486
461 Ga0163162_12535380
462 Ga0157372_10009330
463 Ga0157372_10092562
464 Ga0157372_10107972
465 Ga0157372_10529411
466 Ga0157372_11056391
467 Ga0157372_11414453
468 Ga0157372_11535458
469 Ga0157372_13389787
470 Ga0163163_10048274
471 Ga0157380_11606059
472 Ga0157379_10035323
473 Ga0157379_10613233
474 Ga0157376_10183477
475 Ga0157376_10263260
476 Ga0157376_10403843
477 Ga0157376_10484208
478 Ga0157376_11032759
479 Ga0213872_10003671
480 Ga0209437_103772
481 Ga0209233_1004748
482 Ga0209233_1033681
483 Ga0207426_1057735
484 Ga0207656_10395481
485 Ga0207680_10538658
486 Ga0207647_10036611
487 Ga0207647_10078457
488 Ga0207647_10338113
489 Ga0207705_10005431
490 Ga0207705_10007857
491 Ga0207705_10026023
492 Ga0207705_11420825
493 Ga0207684_11031832
494 Ga0207654_10179844
495 Ga0207707_10418411
496 Ga0207695_10000242
497 Ga0207695_10008987
498 Ga0207695_10425632
499 Ga0207671_10034793
500 Ga0207693_10139282
501 Ga0207693_10267047
502 Ga0207693_10777758
503 Ga0207663_10819265
504 Ga0207660_10190165
505 Ga0207660_10699674
506 Ga0207657_10011638
507 Ga0207657_10342566
508 Ga0207657_10862658
509 Ga0207649_10801327
510 Ga0207652_10004929
511 Ga0207652_10119669
512 Ga0207652_10301636
513 Ga0207652_10317677
514 Ga0207652_10343415
515 Ga0207681_10251807
516 Ga0207694_10070277
517 Ga0207694_10167567
518 Ga0207694_10179876
519 Ga0207694_10767188
520 Ga0207664_10334956
521 Ga0207664_11449338
522 Ga0207644_11315683
523 Ga0207690_10630205
524 Ga0207690_11480479
525 Ga0207706_10137507
526 Ga0207686_10423734
527 Ga0207704_10181776
528 Ga0207691_11359195
529 Ga0207711_10579440
530 Ga0207661_10042536
531 Ga0207679_10020279
532 Ga0207667_10028978
533 Ga0207667_10039337
534 Ga0207667_10051426
535 Ga0207667_10484784
536 Ga0207667_12016549
537 Ga0207668_10565220
538 Ga0207640_10007276
539 Ga0207639_10141046
540 Ga0207639_10159472
541 Ga0207678_10005236
542 Ga0207678_10812231
543 Ga0207678_11963445
544 Ga0207702_10019394
545 Ga0207702_10033769
546 Ga0207702_10336895
547 Ga0207702_10357643
548 Ga0207702_10385335
549 Ga0207702_11400849
550 Ga0207702_11750219
551 Ga0207641_10378941
552 Ga0207648_10098143
553 Ga0207683_10561967
554 Ga0207698_10148547
555 Ga0207698_10204011
556 Ga0207698_10339475
557 Ga0268266_10014688
558 Ga0268266_10083146
559 Ga0268266_10387510
560 Ga0268264_10040852
561 Ga0268264_10881078
562 Ga0316583_10104637
563 Ga0307510_10059362
564 Ga0395900_0098460
565 Ga0395900_0285831
566 Ga0395900_1449845
567 Ga0436365_0368930
568 Ga0436361_1039054
569 Ga0439448_0047585
570 Ga0466965_0308424
571 Ga0466966_0071601
572 Ga0466964_0124311
573 Ga0466971_0180270
574 Ga0466957_0162057
575 Ga0466959_0396429
576 Ga0466967_0155911
577 Ga0495617_053325
578 Ga0495590_0104552
579 Ga0495638_0172724
580 Ga0495651_0290346
581 Ga0495650_0001676
582 Ga0495580_0025649
583 Ga0495580_0027428
584 Ga0495605_0196071
585 Ga0495585_0005957
586 Ga0495594_0010696
587 Ga0495596_0017402
588 Ga0495607_0171077
589 Ga0495583_0021210
590 Ga0495583_0084692
591 Ga0495606_0223648
592 Ga0495608_0258430
593 Ga0495631_0017580
594 Ga0495643_0111972
595 Ga0495644_0000057
596 Ga0495648_0015743
597 Ga0495652_0037871
598 Ga0495652_0194980
599 Ga0495645_0287089
600 Ga0495668_0579778
601 Ga0495611_0066779
602 Ga0495625_0002015
603 Ga0495625_0102246
604 Ga0495625_0144365
605 Ga0495669_0007416
606 Ga0495670_0075570
607 Ga0495671_0044687
608 Ga0495649_0003833
609 Ga0495589_0200417
610 Ga0495672_0003212
611 Ga0495687_019297
612 Ga0495675_0052926
613 Ga0495673_0194091
614 Ga0495681_0091543
615 Ga0495686_0000064
616 Ga0495686_0001426
617 Ga0495686_0012105
618 Ga0495686_0068254
619 Ga0495686_0103390
620 Ga0496100_0411171
621 Ga0496100_1325954
622 Ga0496101_0267989
623 Ga0496102_0048225
624 Ga0496104_0000027
625 Ga0496104_0072312
626 Ga0496105_0183526
627 Ga0496108_0043396
628 Ga0496110_0138861
629 Ga0496112_0227425
630 Ga0496112_1503940
631 Ga0496113_0019506
632 Ga0496114_0163199
633 Ga0496115_0049830
634 Ga0496115_0563903
635 Ga0496119_0091301
636 Ga0496120_0159935
637 Ga0496121_0277301
638 Ga0496126_0000020
639 Ga0496126_0000063
640 Ga0496126_0016126
641 Ga0496126_0905248
642 Ga0496126_1283410
643 Ga0495682_0041420
644 Ga0495682_0110117
645 Ga0501032_0001934
646 Ga0501033_0006143
647 Ga0501034_0012295
648 Ga0501036_0020758
649 Ga0501037_0004846
650 Ga0501038_0005213
651 Ga0501040_0408514
652 Ga0501043_0001698
653 Ga0501043_0644121
654 Ga0501046_0000278
655 Ga0501047_0000362
656 Ga0501048_0111241
657 Ga0501068_1134313
658 Ga0501069_0394810
659 Ga0501069_0518099
660 Ga0501070_0466595
661 Ga0501073_0007223
662 Ga0501074_0100521
663 Ga0501079_0244548
664 Ga0501035_0002831
665 Ga0501035_0209682
666 Ga0501044_0007766
667 Ga0501044_0337562
668 Ga0500554_115339
669 Ga0500595_067953
670 Ga0500559_0117581
671 Ga0501082_0963607
672 2884215935

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01475

FUR

Ferric uptake regulator family

34

152

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2fu4-assembly1.cif.gz_A crystal structure of the dna binding domain of e.coli fur (ferric uptake regulator) 0.8756 7 86
2fu4-assembly1.cif.gz_A crystal structure of the dna binding domain of e.coli fur (ferric uptake regulator) 0.8563 7 86
5l0p-assembly1.cif.gz_A-2 symmetry-based assembly of a two-dimensional protein lattice 0.8479 11 86
1mzb-assembly1.cif.gz_A ferric uptake regulator 0.8202 9 130
1sax-assembly1.cif.gz_A three-dimensional structure of s.aureus methicillin-resistance regulating transcriptional repressor meci in complex with 25-bp ds-dna 0.8172 18 88
ID Description Score Start End Superfamily
af_P9WN87_5_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 8 84 1.10.10.10
4mtdB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8925 9 74 1.10.10.10
4mteC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8921 9 74 1.10.10.10
4razB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8864 9 85 1.10.10.10
2fu4B00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8858 7 86 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7S7SN62-F1-model_v4 Transcriptional repressor 0.9175 8 138 GO:0000976
GO:0003700
GO:0008270
GO:0045892
GO:1900376
AF-A0A7C4C7B6-F1-model_v4 Chromosomal replication initiator protein DnaA ATPAse domain-containing protein 0.8982 8 138 GO:0003688
GO:0003700
GO:0005886
GO:0006270
GO:0046872
AF-A0A350ASR8-F1-model_v4 Transcriptional repressor 0.8961 12 90 GO:0000976
GO:0003700
GO:0008270
GO:0045892
GO:1900376
AF-E8V4P8-F1-model_v4 Ferric uptake regulator, Fur family 0.8922 1 141 GO:0000976
GO:0003700
GO:0008270
GO:0045892
GO:1900376
AF-A0A7G8BZF5-F1-model_v4 Transcriptional repressor 0.8896 5 138 GO:0000976
GO:0003700
GO:0008270
GO:0045892
GO:1900376

Map