F412608

General Info

Members Datasets Scaffolds Average Seq Length
336 215 672 362

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10014810|Ga0075368_100148103
Length 371
Sequence MVEGKRSVLHERHEQLGAKFAVFGGWSMPLEYPSGVVKEHTAVREGVGIFDVSHLGKAMVTGPGAADLVNATLTNDLRRIGPGQAQYTLCCDDQSGGIVDDLIVYLHTDERVLLVPNAANTAEVVRRLSAAAPEGVTVTDHHDDYAVLAVQGTRSDEVLAAVGLPTGHDYMSFVEAQLPGGDDGVGVVVCRTGYTGERGYELIAANEVAVTLWDALMAAGSDLGMLPCGLGARDTLRTEMGYPLHGQDISLDVTPNQARLGWAVGWEKEQFWGRDALRREREAGPDRLLRGIVATGRGIPRPHMAVSLTHDLMVGEVTSGTFSPTLKKGVGLALVSSQVAPDAEVGVDIRGRREIFQVTKPPFVDTSTRES

Samples

Sample ID Description Type Environment
1 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
62 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
106 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
107 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
108 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
114 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
115 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
121 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
129 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
130 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
135 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
136 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
137 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
138 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
155 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
156 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
161 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
162 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
163 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
177 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
178 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
179 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
182 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
183 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
184 2626541554 Frankia sp. AvcI.1 Isolate Nodule
185 2643221615 Nocardioides sp. Root224 Isolate Unclassified
186 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
187 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
188 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
189 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
190 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
191 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
192 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
193 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
194 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
195 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
196 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
197 2858868258 Micromonospora sp. MH33 Isolate Unclassified
198 2858882152 Micromonospora noduli MED15 Isolate Nodule
199 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
200 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
201 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
202 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
203 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
204 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
205 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
206 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
207 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
208 2902582711 Micromonospora sp. AP08 Isolate Unclassified
209 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
210 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
211 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
212 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
213 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
214 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
215 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 89.29
Metatranscriptomes 0.89
Isolates 9.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.74
Nodule 1.79
Rhizoplane 9.23
Rhizosphere 73.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075368_10014810 3300006042 Bacteria 2885
2 LJQas_1003651 3300000549 Bacteria 2044
3 JGI24740J21852_10019761 3300001979 Bacteria 2366
4 JGI24739J22299_10010445 3300001989 Bacteria 3447
5 JGI24737J22298_10009092 3300001990 Bacteria 3311
6 Ga0070658_10000108 3300005327 Bacteria 73704
7 Ga0070658_10000342 3300005327 Bacteria 40341
8 Ga0070658_10044764 3300005327 Bacteria 3577
9 Ga0070658_10092037 3300005327 Bacteria 2500
10 Ga0070680_100001460 3300005336 Bacteria 17136
11 Ga0070680_100008340 3300005336 Bacteria 7930
12 Ga0070680_100013638 3300005336 Bacteria 6335
13 Ga0070682_100012318 3300005337 Bacteria 4901
14 Ga0070660_100003951 3300005339 Bacteria 10243
15 Ga0070660_100039511 3300005339 Bacteria 3587
16 Ga0070660_100060142 3300005339 Bacteria 2948
17 Ga0070661_100193408 3300005344 Bacteria 1552
18 Ga0070668_100170958 3300005347 Bacteria 1769
19 Ga0070659_100136729 3300005366 Bacteria 1993
20 Ga0070714_100048024 3300005435 Bacteria 3629
21 Ga0070713_100018369 3300005436 Bacteria 5315
22 Ga0070700_100032736 3300005441 Bacteria 3127
23 Ga0070700_100155000 3300005441 Bacteria 1571
24 Ga0070708_100155612 3300005445 Bacteria 2128
25 Ga0070663_100036704 3300005455 Bacteria 3406
26 Ga0070663_100141031 3300005455 Bacteria 1840
27 Ga0070681_10001372 3300005458 Bacteria 21328
28 Ga0070681_10001628 3300005458 Bacteria 20013
29 Ga0070679_100000051 3300005530 Bacteria 86019
30 Ga0070679_100011544 3300005530 Bacteria 8421
31 Ga0070684_100080078 3300005535 Bacteria 2889
32 Ga0070684_100080599 3300005535 Bacteria 2880
33 Ga0068853_100068881 3300005539 Bacteria 3077
34 Ga0070672_100010185 3300005543 Bacteria 6511
35 Ga0070665_100083577 3300005548 Bacteria 3197
36 Ga0068855_100001471 3300005563 Bacteria 29429
37 Ga0068855_100112550 3300005563 Bacteria 3123
38 Ga0068854_100000770 3300005578 Bacteria 19057
39 Ga0068856_100035609 3300005614 Bacteria 4879
40 Ga0068852_100023089 3300005616 Bacteria 5001
41 Ga0068852_100028881 3300005616 Bacteria 4546
42 Ga0068864_100078862 3300005618 Bacteria 2883
43 Ga0068861_100173113 3300005719 Bacteria 1791
44 Ga0068870_10010367 3300005840 Bacteria 4280
45 Ga0068858_100000237 3300005842 Bacteria 59734
46 Ga0081455_10000136 3300005937 Bacteria 85921
47 Ga0081538_10003720 3300005981 Bacteria 14317
48 Ga0081539_10026890 3300005985 Bacteria 3657
49 Ga0075365_10004600 3300006038 Bacteria 7340
50 Ga0075365_10110530 3300006038 Bacteria 1888
51 Ga0075368_10027182 3300006042 Bacteria 2205
52 Ga0075363_100008893 3300006048 Bacteria 4699
53 Ga0075363_100145100 3300006048 Bacteria 1338
54 Ga0075364_10007665 3300006051 Bacteria 6420
55 Ga0075364_10124809 3300006051 Bacteria 1725
56 Ga0075364_10239235 3300006051 Bacteria 1233
57 Ga0075370_10089978 3300006353 Bacteria 1770
58 Ga0075430_100018722 3300006846 Bacteria 5894
59 Ga0075431_100011810 3300006847 Bacteria 8814
60 Ga0068865_100011792 3300006881 Bacteria 5478
61 Ga0105240_10024123 3300009093 Bacteria 8028
62 Ga0105240_10084084 3300009093 Bacteria 3903
63 Ga0111539_10126291 3300009094 Bacteria 2997
64 Ga0105245_10011453 3300009098 Bacteria 7724
65 Ga0105245_10028193 3300009098 Bacteria 4951
66 Ga0105245_10089314 3300009098 Bacteria 2832
67 Ga0105245_10186844 3300009098 Bacteria 1983
68 Ga0105247_10000448 3300009101 Bacteria 34932
69 Ga0114129_10001224 3300009147 Bacteria 34117
70 Ga0105243_10007913 3300009148 Bacteria 8163
71 Ga0105243_10089309 3300009148 Bacteria 2533
72 Ga0105241_10009677 3300009174 Bacteria 7084
73 Ga0105237_10026025 3300009545 Bacteria 5980
74 Ga0105238_10104872 3300009551 Bacteria 2808
75 Ga0105249_10068158 3300009553 Bacteria 3280
76 Ga0105246_10036535 3300011119 Bacteria 3292
77 Ga0105246_10052365 3300011119 Bacteria 2806
78 Ga0157370_10118780 3300013104 Bacteria 2469
79 Ga0157369_10001283 3300013105 Bacteria 31243
80 Ga0157369_10167551 3300013105 Bacteria 2316
81 Ga0157369_10240511 3300013105 Bacteria 1891
82 Ga0157372_10032619 3300013307 Bacteria 5712
83 Ga0157375_10411932 3300013308 Bacteria 1518
84 Ga0163163_10048078 3300014325 Bacteria 4194
85 Ga0163163_10079027 3300014325 Bacteria 3287
86 Ga0157380_10005482 3300014326 Bacteria 8865
87 Ga0157377_10006282 3300014745 Bacteria 5653
88 Ga0157379_10000280 3300014968 Bacteria 40342
89 Ga0163161_10018148 3300017792 Bacteria 4932
90 Ga0163161_10062766 3300017792 Bacteria 2707
91 Ga0206354_10536397 3300020081 Bacteria 2802
92 Ga0206353_10726518 3300020082 Bacteria 1928
93 Ga0206353_10836602 3300020082 Bacteria 20040
94 Ga0207710_10000023 3300025900 Bacteria 329909
95 Ga0207647_10014204 3300025904 Bacteria 5496
96 Ga0207647_10014749 3300025904 Bacteria 5379
97 Ga0207647_10026922 3300025904 Bacteria 3754
98 Ga0207643_10014468 3300025908 Bacteria 4287
99 Ga0207705_10000394 3300025909 Bacteria 38574
100 Ga0207707_10000711 3300025912 Bacteria 33102
101 Ga0207707_10000983 3300025912 Bacteria 27372
102 Ga0207695_10001507 3300025913 Bacteria 38706
103 Ga0207695_10231674 3300025913 Bacteria 1751
104 Ga0207671_10000780 3300025914 Bacteria 40356
105 Ga0207660_10000164 3300025917 Bacteria 41667
106 Ga0207660_10002734 3300025917 Bacteria 11549
107 Ga0207657_10019389 3300025919 Bacteria 6461
108 Ga0207657_10094833 3300025919 Bacteria 2484
109 Ga0207657_10106932 3300025919 Bacteria 2314
110 Ga0207652_10000146 3300025921 Bacteria 76308
111 Ga0207652_10000702 3300025921 Bacteria 32441
112 Ga0207652_10054827 3300025921 Bacteria 3428
113 Ga0207652_10069680 3300025921 Bacteria 3053
114 Ga0207694_10000476 3300025924 Bacteria 36547
115 Ga0207687_10106488 3300025927 Bacteria 2073
116 Ga0207664_10008634 3300025929 Bacteria 7121
117 Ga0207690_10010541 3300025932 Bacteria 5498
118 Ga0207690_10015152 3300025932 Bacteria 4668
119 Ga0207686_10075023 3300025934 Bacteria 2188
120 Ga0207709_10035704 3300025935 Bacteria 2941
121 Ga0207709_10101499 3300025935 Bacteria 1903
122 Ga0207691_10006431 3300025940 Bacteria 11347
123 Ga0207691_10038980 3300025940 Bacteria 4397
124 Ga0207661_10103232 3300025944 Bacteria 2399
125 Ga0207679_10132877 3300025945 Bacteria 1999
126 Ga0207667_10010661 3300025949 Bacteria 10727
127 Ga0207667_10203615 3300025949 Bacteria 2030
128 Ga0207640_10005486 3300025981 Bacteria 6916
129 Ga0207677_10138105 3300026023 Bacteria 1862
130 Ga0207703_10000003 3300026035 Bacteria 532213
131 Ga0207678_10010988 3300026067 Bacteria 7952
132 Ga0207678_10161974 3300026067 Bacteria 1910
133 Ga0207708_10001687 3300026075 Bacteria 16343
134 Ga0207708_10089032 3300026075 Bacteria 2378
135 Ga0207648_10142786 3300026089 Bacteria 2111
136 Ga0207676_10080777 3300026095 Bacteria 2640
137 Ga0207674_10016350 3300026116 Bacteria 8124
138 Ga0207675_100017301 3300026118 Bacteria 6731
139 Ga0207675_100297973 3300026118 Bacteria 1570
140 Ga0207698_10019054 3300026142 Bacteria 4689
141 Ga0207698_10052037 3300026142 Bacteria 3135
142 Ga0268266_10064659 3300028379 Bacteria 3161
143 Ga0307405_10032384 3300031731 Bacteria 3090
144 Ga0307409_100042804 3300031995 Bacteria 3394
145 Ga0307409_100219136 3300031995 Bacteria 1717
146 Ga0307416_100044301 3300032002 Bacteria 3492
147 Ga0307416_100162042 3300032002 Bacteria 2069
148 Ga0307411_10108707 3300032005 Bacteria 1979
149 Ga0307415_100087454 3300032126 Bacteria 2245
150 Ga0307507_10000011 3300033179 Bacteria 261849
151 Ga0395899_0011998 3300037312 Bacteria 6639
152 Ga0395900_0129737 3300037418 Bacteria 2584
153 Ga0395898_0082606 3300037466 Bacteria 3097
154 Ga0395898_0105162 3300037466 Bacteria 2707
155 Ga0395905_0043417 3300037471 Bacteria 4218
156 Ga0436364_1421217 3300037853 Bacteria 3552
157 Ga0451853_0310096 3300041512 Bacteria 2587
158 Ga0439460_0076243 3300042461 Bacteria 1046
159 Ga0466969_0065746 3300044656 Bacteria 1752
160 Ga0466972_0018708 3300044658 Bacteria 3464
161 Ga0466965_0004045 3300044683 Bacteria 6505
162 Ga0466965_0031244 3300044683 Bacteria 2597
163 Ga0466965_0062034 3300044683 Bacteria 1869
164 Ga0466966_0036586 3300044684 Bacteria 3169
165 Ga0466966_0074436 3300044684 Bacteria 2123
166 Ga0466961_0036134 3300044693 Bacteria 3171
167 Ga0466963_0013622 3300044694 Bacteria 4998
168 Ga0466963_0095861 3300044694 Bacteria 2026
169 Ga0466964_0001607 3300044706 Bacteria 7795
170 Ga0466971_0083604 3300044719 Bacteria 1457
171 Ga0466970_0003221 3300044765 Bacteria 7927
172 Ga0466970_0008148 3300044765 Bacteria 5263
173 Ga0466970_0009056 3300044765 Bacteria 5023
174 Ga0466970_0014618 3300044765 Bacteria 4031
175 Ga0466970_0022595 3300044765 Bacteria 3283
176 Ga0466970_0072581 3300044765 Bacteria 1852
177 Ga0466957_0009205 3300044842 Bacteria 5631
178 Ga0466957_0031773 3300044842 Bacteria 3157
179 Ga0466957_0055848 3300044842 Bacteria 2413
180 Ga0466960_0002321 3300044901 Bacteria 7143
181 Ga0466960_0014942 3300044901 Bacteria 3337
182 Ga0466960_0045497 3300044901 Bacteria 2097
183 Ga0466960_0049562 3300044901 Bacteria 2022
184 Ga0466960_0067464 3300044901 Bacteria 1772
185 Ga0466960_0077631 3300044901 Bacteria 1666
186 Ga0466959_0148305 3300045049 Bacteria 1655
187 Ga0466958_0004309 3300045836 Bacteria 7496
188 Ga0466958_0037018 3300045836 Bacteria 2922
189 Ga0466967_0024429 3300045976 Bacteria 4969
190 Ga0466967_0026794 3300045976 Bacteria 4782
191 Ga0466967_0076988 3300045976 Bacteria 3001
192 Ga0466967_0106787 3300045976 Bacteria 2567
193 Ga0466967_0232682 3300045976 Bacteria 1755
194 Ga0466967_0262723 3300045976 Bacteria 1652
195 Ga0495651_0001041 3300046462 Bacteria 21446
196 Ga0495628_0013075 3300046516 Bacteria 6990
197 Ga0495652_0001073 3300046529 Bacteria 31003
198 Ga0495652_0080096 3300046529 Bacteria 2699
199 Ga0495667_0172251 3300046559 Bacteria 1391
200 Ga0495600_0053483 3300046809 Bacteria 2637
201 Ga0495604_0018535 3300047317 Bacteria 5577
202 Ga0496100_0012648 3300048903 Bacteria 4845
203 Ga0496100_0141104 3300048903 Bacteria 1708
204 Ga0496102_0051455 3300048905 Bacteria 3752
205 Ga0496102_0212435 3300048905 Bacteria 1824
206 Ga0496102_0384050 3300048905 Bacteria 1321
207 Ga0496103_0095413 3300048906 Bacteria 1879
208 Ga0496104_0015536 3300048907 Bacteria 6896
209 Ga0496104_0068222 3300048907 Bacteria 3379
210 Ga0496104_0287674 3300048907 Bacteria 1556
211 Ga0496104_0370023 3300048907 Bacteria 1346
212 Ga0496105_0001372 3300048908 Bacteria 17147
213 Ga0496105_0130240 3300048908 Bacteria 2074
214 Ga0496105_0204006 3300048908 Bacteria 1613
215 Ga0496107_0018649 3300048910 Bacteria 4888
216 Ga0496107_0134264 3300048910 Bacteria 1828
217 Ga0496108_0047498 3300048911 Bacteria 3588
218 Ga0496109_0050695 3300048912 Bacteria 3779
219 Ga0496109_0069655 3300048912 Bacteria 3226
220 Ga0496109_0111125 3300048912 Bacteria 2548
221 Ga0496109_0239078 3300048912 Bacteria 1709
222 Ga0496110_0033974 3300048913 Bacteria 4414
223 Ga0496110_0150605 3300048913 Bacteria 2106
224 Ga0496111_0083994 3300048914 Bacteria 2327
225 Ga0496111_0147171 3300048914 Bacteria 1746
226 Ga0496112_0038640 3300048915 Bacteria 4661
227 Ga0496114_0019383 3300048917 Bacteria 5511
228 Ga0496114_0065193 3300048917 Bacteria 3051
229 Ga0496114_0094129 3300048917 Bacteria 2548
230 Ga0496114_0207937 3300048917 Bacteria 1716
231 Ga0496114_0249003 3300048917 Bacteria 1563
232 Ga0496115_0013046 3300048918 Bacteria 6273
233 Ga0496119_0003941 3300048922 Bacteria 15047
234 Ga0496121_0014635 3300048924 Bacteria 8298
235 Ga0501031_0014519 3300049568 Bacteria 5121
236 Ga0501032_0002754 3300049569 Bacteria 13683
237 Ga0501033_0010368 3300049570 Bacteria 7151
238 Ga0501033_0060468 3300049570 Bacteria 2795
239 Ga0501036_0023158 3300049572 Bacteria 5229
240 Ga0501036_0026956 3300049572 Bacteria 4856
241 Ga0501037_0000572 3300049573 Bacteria 29074
242 Ga0501038_0009788 3300049574 Bacteria 8780
243 Ga0501038_0021679 3300049574 Bacteria 5763
244 Ga0501039_0040553 3300049575 Bacteria 3594
245 Ga0501041_0021317 3300049577 Bacteria 3883
246 Ga0501041_0143837 3300049577 Bacteria 1488
247 Ga0501042_0025488 3300049578 Bacteria 4154
248 Ga0501042_0025772 3300049578 Bacteria 4132
249 Ga0501046_0000229 3300049580 Bacteria 57869
250 Ga0501046_0016184 3300049580 Bacteria 6251
251 Ga0501046_0047180 3300049580 Bacteria 3416
252 Ga0501048_0005159 3300049582 Bacteria 9954
253 Ga0501048_0012736 3300049582 Bacteria 6254
254 Ga0501048_0159151 3300049582 Bacteria 1598
255 Ga0501067_0019832 3300049583 Bacteria 3722
256 Ga0501069_0065944 3300049585 Bacteria 2025
257 Ga0501069_0099611 3300049585 Bacteria 1649
258 Ga0501069_0152415 3300049585 Bacteria 1329
259 Ga0501069_0155206 3300049585 Bacteria 1317
260 Ga0501070_0010247 3300049586 Bacteria 7931
261 Ga0501070_0018252 3300049586 Bacteria 5885
262 Ga0501070_0330359 3300049586 Bacteria 1239
263 Ga0501071_0002481 3300049587 Bacteria 11209
264 Ga0501072_0076090 3300049588 Bacteria 2655
265 Ga0501074_0005614 3300049590 Bacteria 9030
266 Ga0501074_0027212 3300049590 Bacteria 4146
267 Ga0501075_0053454 3300049591 Bacteria 3038
268 Ga0501076_0004804 3300049592 Bacteria 9645
269 Ga0501076_0024568 3300049592 Bacteria 4659
270 Ga0501077_0096004 3300049593 Bacteria 1879
271 Ga0501077_0150593 3300049593 Bacteria 1476
272 Ga0501079_0061275 3300049741 Bacteria 2902
273 Ga0501080_0158296 3300049742 Bacteria 2092
274 Ga0501081_0022836 3300049743 Bacteria 4188
275 Ga0501035_0194480 3300049822 Bacteria 1742
276 nmdc:mga03n38_3377_c1 3300050490 Bacteria 5117
277 nmdc:mga00v17_108164_c1 3300050491 Bacteria 1762
278 nmdc:mga00v17_22310_c1 3300050491 Bacteria 3652
279 nmdc:mga00v17_4410_c1 3300050491 Bacteria 7318
280 nmdc:mga0yw44_109226_c1 3300050492 Bacteria 1770
281 nmdc:mga0yw44_26444_c1 3300050492 Bacteria 3315
282 nmdc:mga0yw44_27777_c1 3300050492 Bacteria 3246
283 nmdc:mga0yw44_5329_c1 3300050492 Bacteria 6052
284 nmdc:mga0yw44_8805_c1 3300050492 Bacteria 5052
285 nmdc:mga07m45_7622_c1 3300050496 Bacteria 5536
286 nmdc:mga07m45_7804_c1 3300050496 Bacteria 5477
287 nmdc:mga05p37_3581_c1 3300050507 Bacteria 18152
288 nmdc:mga09592_35217_c1 3300050508 Bacteria 4190
289 Ga0495601_0015031 3300053077 Bacteria 4675
290 Ga0495612_0008247 3300053078 Bacteria 4232
291 Ga0495619_0129123 3300053085 Bacteria 1736
292 Ga0495619_0167970 3300053085 Bacteria 1517
293 Ga0500644_0000063 3300053088 Bacteria 62716
294 Ga0500556_0000513 3300053104 Bacteria 26475
295 Ga0500593_000011 3300053117 Bacteria 62847
296 Ga0500573_0002317 3300053140 Bacteria 9471
297 Ga0500573_0028542 3300053140 Bacteria 3214
298 Ga0501084_0078755 3300054114 Bacteria 2762
299 Ga0501084_0229510 3300054114 Bacteria 1567
300 Ga0466962_0021849 3300061719 Bacteria 3072
301 Ga0466962_0025064 3300061719 Bacteria 2863
302 Ga0530510_0069780 3300061734 Bacteria 2550
303 Ga0530510_0116621 3300061734 Bacteria 1958
304 2515850693 2515154155 Bacteria 7985436
305 2626633864 2626541554 Bacteria 7741902
306 2644093630 2643221615 Bacteria 5487866
307 2644323472 2643221657 Bacteria 5490246
308 2676475100 2675903058 Bacteria 6822861
309 2772644109 2772190715 Bacteria 6959372
310 2812333291 2811994874 Bacteria 5367947
311 2827629967 2827628540 Bacteria 6858585
312 2855386828 2855386786 Bacteria 4752232
313 2855676329 2855670206 Bacteria 7120389
314 2855681468 2855676851 Bacteria 7063653
315 2857289336 2857288857 Bacteria 7189066
316 2857486138 2857481737 Bacteria 4761446
317 2858855266 2858848962 Bacteria 6963058
318 2858873756 2858868258 Bacteria 7683772
319 2858888833 2858882152 Bacteria 7230291
320 2858889105 2858888857 Bacteria 7060307
321 2858897319 2858895516 Bacteria 7378898
322 2858905867 2858902515 Bacteria 7086037
323 2861522890 2861520306 Bacteria 8348283
324 2869051955 2869048445 Bacteria 6875584
325 2869062246 2869061728 Bacteria 7112407
326 2869074637 2869068681 Bacteria 7205615
327 2880489581 2880489317 Bacteria 7096270
328 2880496124 2880495981 Bacteria 7340502
329 2902588091 2902582711 Bacteria 6187705
330 2929224800 2929219909 Bacteria 6984360
331 2929232264 2929226422 Bacteria 7248583
332 2996227464 2996221748 Bacteria 6799777
333 8003834874 8003830390 Bacteria 6541657
334 8054708277 8054704163 Bacteria 7247792
335 8054732888 8054727385 Bacteria 7558670
336 8054738784 8054734606 Bacteria 6947278
337 Ga0075368_10014810
338 LJQas_1003651
339 JGI24740J21852_10019761
340 JGI24739J22299_10010445
341 JGI24737J22298_10009092
342 Ga0070658_10000108
343 Ga0070658_10000342
344 Ga0070658_10044764
345 Ga0070658_10092037
346 Ga0070680_100001460
347 Ga0070680_100008340
348 Ga0070680_100013638
349 Ga0070682_100012318
350 Ga0070660_100003951
351 Ga0070660_100039511
352 Ga0070660_100060142
353 Ga0070661_100193408
354 Ga0070668_100170958
355 Ga0070659_100136729
356 Ga0070714_100048024
357 Ga0070713_100018369
358 Ga0070700_100032736
359 Ga0070700_100155000
360 Ga0070708_100155612
361 Ga0070663_100036704
362 Ga0070663_100141031
363 Ga0070681_10001372
364 Ga0070681_10001628
365 Ga0070679_100000051
366 Ga0070679_100011544
367 Ga0070684_100080078
368 Ga0070684_100080599
369 Ga0068853_100068881
370 Ga0070672_100010185
371 Ga0070665_100083577
372 Ga0068855_100001471
373 Ga0068855_100112550
374 Ga0068854_100000770
375 Ga0068856_100035609
376 Ga0068852_100023089
377 Ga0068852_100028881
378 Ga0068864_100078862
379 Ga0068861_100173113
380 Ga0068870_10010367
381 Ga0068858_100000237
382 Ga0081455_10000136
383 Ga0081538_10003720
384 Ga0081539_10026890
385 Ga0075365_10004600
386 Ga0075365_10110530
387 Ga0075368_10027182
388 Ga0075363_100008893
389 Ga0075363_100145100
390 Ga0075364_10007665
391 Ga0075364_10124809
392 Ga0075364_10239235
393 Ga0075370_10089978
394 Ga0075430_100018722
395 Ga0075431_100011810
396 Ga0068865_100011792
397 Ga0105240_10024123
398 Ga0105240_10084084
399 Ga0111539_10126291
400 Ga0105245_10011453
401 Ga0105245_10028193
402 Ga0105245_10089314
403 Ga0105245_10186844
404 Ga0105247_10000448
405 Ga0114129_10001224
406 Ga0105243_10007913
407 Ga0105243_10089309
408 Ga0105241_10009677
409 Ga0105237_10026025
410 Ga0105238_10104872
411 Ga0105249_10068158
412 Ga0105246_10036535
413 Ga0105246_10052365
414 Ga0157370_10118780
415 Ga0157369_10001283
416 Ga0157369_10167551
417 Ga0157369_10240511
418 Ga0157372_10032619
419 Ga0157375_10411932
420 Ga0163163_10048078
421 Ga0163163_10079027
422 Ga0157380_10005482
423 Ga0157377_10006282
424 Ga0157379_10000280
425 Ga0163161_10018148
426 Ga0163161_10062766
427 Ga0206354_10536397
428 Ga0206353_10726518
429 Ga0206353_10836602
430 Ga0207710_10000023
431 Ga0207647_10014204
432 Ga0207647_10014749
433 Ga0207647_10026922
434 Ga0207643_10014468
435 Ga0207705_10000394
436 Ga0207707_10000711
437 Ga0207707_10000983
438 Ga0207695_10001507
439 Ga0207695_10231674
440 Ga0207671_10000780
441 Ga0207660_10000164
442 Ga0207660_10002734
443 Ga0207657_10019389
444 Ga0207657_10094833
445 Ga0207657_10106932
446 Ga0207652_10000146
447 Ga0207652_10000702
448 Ga0207652_10054827
449 Ga0207652_10069680
450 Ga0207694_10000476
451 Ga0207687_10106488
452 Ga0207664_10008634
453 Ga0207690_10010541
454 Ga0207690_10015152
455 Ga0207686_10075023
456 Ga0207709_10035704
457 Ga0207709_10101499
458 Ga0207691_10006431
459 Ga0207691_10038980
460 Ga0207661_10103232
461 Ga0207679_10132877
462 Ga0207667_10010661
463 Ga0207667_10203615
464 Ga0207640_10005486
465 Ga0207677_10138105
466 Ga0207703_10000003
467 Ga0207678_10010988
468 Ga0207678_10161974
469 Ga0207708_10001687
470 Ga0207708_10089032
471 Ga0207648_10142786
472 Ga0207676_10080777
473 Ga0207674_10016350
474 Ga0207675_100017301
475 Ga0207675_100297973
476 Ga0207698_10019054
477 Ga0207698_10052037
478 Ga0268266_10064659
479 Ga0307405_10032384
480 Ga0307409_100042804
481 Ga0307409_100219136
482 Ga0307416_100044301
483 Ga0307416_100162042
484 Ga0307411_10108707
485 Ga0307415_100087454
486 Ga0307507_10000011
487 Ga0395899_0011998
488 Ga0395900_0129737
489 Ga0395898_0082606
490 Ga0395898_0105162
491 Ga0395905_0043417
492 Ga0436364_1421217
493 Ga0451853_0310096
494 Ga0439460_0076243
495 Ga0466969_0065746
496 Ga0466972_0018708
497 Ga0466965_0004045
498 Ga0466965_0031244
499 Ga0466965_0062034
500 Ga0466966_0036586
501 Ga0466966_0074436
502 Ga0466961_0036134
503 Ga0466963_0013622
504 Ga0466963_0095861
505 Ga0466964_0001607
506 Ga0466971_0083604
507 Ga0466970_0003221
508 Ga0466970_0008148
509 Ga0466970_0009056
510 Ga0466970_0014618
511 Ga0466970_0022595
512 Ga0466970_0072581
513 Ga0466957_0009205
514 Ga0466957_0031773
515 Ga0466957_0055848
516 Ga0466960_0002321
517 Ga0466960_0014942
518 Ga0466960_0045497
519 Ga0466960_0049562
520 Ga0466960_0067464
521 Ga0466960_0077631
522 Ga0466959_0148305
523 Ga0466958_0004309
524 Ga0466958_0037018
525 Ga0466967_0024429
526 Ga0466967_0026794
527 Ga0466967_0076988
528 Ga0466967_0106787
529 Ga0466967_0232682
530 Ga0466967_0262723
531 Ga0495651_0001041
532 Ga0495628_0013075
533 Ga0495652_0001073
534 Ga0495652_0080096
535 Ga0495667_0172251
536 Ga0495600_0053483
537 Ga0495604_0018535
538 Ga0496100_0012648
539 Ga0496100_0141104
540 Ga0496102_0051455
541 Ga0496102_0212435
542 Ga0496102_0384050
543 Ga0496103_0095413
544 Ga0496104_0015536
545 Ga0496104_0068222
546 Ga0496104_0287674
547 Ga0496104_0370023
548 Ga0496105_0001372
549 Ga0496105_0130240
550 Ga0496105_0204006
551 Ga0496107_0018649
552 Ga0496107_0134264
553 Ga0496108_0047498
554 Ga0496109_0050695
555 Ga0496109_0069655
556 Ga0496109_0111125
557 Ga0496109_0239078
558 Ga0496110_0033974
559 Ga0496110_0150605
560 Ga0496111_0083994
561 Ga0496111_0147171
562 Ga0496112_0038640
563 Ga0496114_0019383
564 Ga0496114_0065193
565 Ga0496114_0094129
566 Ga0496114_0207937
567 Ga0496114_0249003
568 Ga0496115_0013046
569 Ga0496119_0003941
570 Ga0496121_0014635
571 Ga0501031_0014519
572 Ga0501032_0002754
573 Ga0501033_0010368
574 Ga0501033_0060468
575 Ga0501036_0023158
576 Ga0501036_0026956
577 Ga0501037_0000572
578 Ga0501038_0009788
579 Ga0501038_0021679
580 Ga0501039_0040553
581 Ga0501041_0021317
582 Ga0501041_0143837
583 Ga0501042_0025488
584 Ga0501042_0025772
585 Ga0501046_0000229
586 Ga0501046_0016184
587 Ga0501046_0047180
588 Ga0501048_0005159
589 Ga0501048_0012736
590 Ga0501048_0159151
591 Ga0501067_0019832
592 Ga0501069_0065944
593 Ga0501069_0099611
594 Ga0501069_0152415
595 Ga0501069_0155206
596 Ga0501070_0010247
597 Ga0501070_0018252
598 Ga0501070_0330359
599 Ga0501071_0002481
600 Ga0501072_0076090
601 Ga0501074_0005614
602 Ga0501074_0027212
603 Ga0501075_0053454
604 Ga0501076_0004804
605 Ga0501076_0024568
606 Ga0501077_0096004
607 Ga0501077_0150593
608 Ga0501079_0061275
609 Ga0501080_0158296
610 Ga0501081_0022836
611 Ga0501035_0194480
612 nmdc:mga03n38_3377_c1
613 nmdc:mga00v17_108164_c1
614 nmdc:mga00v17_22310_c1
615 nmdc:mga00v17_4410_c1
616 nmdc:mga0yw44_109226_c1
617 nmdc:mga0yw44_26444_c1
618 nmdc:mga0yw44_27777_c1
619 nmdc:mga0yw44_5329_c1
620 nmdc:mga0yw44_8805_c1
621 nmdc:mga07m45_7622_c1
622 nmdc:mga07m45_7804_c1
623 nmdc:mga05p37_3581_c1
624 nmdc:mga09592_35217_c1
625 Ga0495601_0015031
626 Ga0495612_0008247
627 Ga0495619_0129123
628 Ga0495619_0167970
629 Ga0500644_0000063
630 Ga0500556_0000513
631 Ga0500593_000011
632 Ga0500573_0002317
633 Ga0500573_0028542
634 Ga0501084_0078755
635 Ga0501084_0229510
636 Ga0466962_0021849
637 Ga0466962_0025064
638 Ga0530510_0069780
639 Ga0530510_0116621
640 2515850693
641 2626633864
642 2644093630
643 2644323472
644 2676475100
645 2772644109
646 2812333291
647 2827629967
648 2855386828
649 2855676329
650 2855681468
651 2857289336
652 2857486138
653 2858855266
654 2858873756
655 2858888833
656 2858889105
657 2858897319
658 2858905867
659 2861522890
660 2869051955
661 2869062246
662 2869074637
663 2880489581
664 2880496124
665 2902588091
666 2929224800
667 2929232264
668 2996227464
669 8003834874
670 8054708277
671 8054732888
672 8054738784

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

9

263

0.95

PF08669

GCV_T_C

Glycine cleavage T-protein C-terminal barrel domain

287

365

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.9501 15 377
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.9475 15 377
3gir-assembly1.cif.gz_A crystal structure of glycine cleavage system aminomethyltransferase t from bartonella henselae 0.9458 15 374
1yx2-assembly1.cif.gz_A crystal structure of the probable aminomethyltransferase from bacillus subtilis 0.9391 15 370
3gir-assembly1.cif.gz_A crystal structure of glycine cleavage system aminomethyltransferase t from bartonella henselae 0.9331 15 374
ID Description Score Start End Superfamily
af_P9WN51_56_141_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9959 65 151 3.30.1360.120
af_P9WN51_56_141_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9845 65 151 3.30.1360.120
af_P48015_310_389_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.951 293 367 2.40.30.110
af_Q8I6T0_316_400_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9351 291 371 2.40.30.110
af_P9WN51_281_363_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9312 291 371 2.40.30.110
ID Description Score Start End GO Terms
AF-A0A7W0QVI3-F1-model_v4 Glycine cleavage system protein T 0.9889 13 153 GO:0005829
AF-A0A6I2VLC2-F1-model_v4 aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9878 15 376 GO:0004047
GO:0005829
GO:0005960
GO:0006546
GO:0008168
GO:0008483
GO:0032259
AF-A0A6I2VLC2-F1-model_v4 aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.9851 15 376 GO:0004047
GO:0005829
GO:0005960
GO:0006546
GO:0008168
GO:0008483
GO:0032259
AF-A0A094Q1V5-F1-model_v4 Glycine cleavage system T protein 0.9816 160 376 GO:0005829
AF-A0A2I1PAN4-F1-model_v4 aminomethyltransferase (EC 2.1.2.10) (Glycine cleavage system T protein) 0.978 11 369 GO:0004047
GO:0005829
GO:0005960
GO:0006546
GO:0008483

Map