F412592

General Info

Members Datasets Scaffolds Average Seq Length
336 168 334 233

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100012738|Ga0068856_1000127381
Length 283
Sequence LVAKSSCPSGALSFLRHDLGILKIDFYGQTSFTPARQPPCAPQYFSRIFKFTGMTFAEKIIDFNNQLHYTGSALPPGIRIMNPFREYPEARRVSEIFYRKYYSDINTRHLILGINPGRFGAGLTGIPFTDPKRLVSECHIEYNGPPAHEPSSVFIYEMINAFGGPERFYGKLYINSLCPLGFTSIDAKGKETNYNYYDSPALATTVNDFIVENIRTQIGLGIQTDACFCFGTGKNENYLRKLNDKHHFFGKIVALEHPRFIMQYKSKSKQQYIDKYLAAFAGL

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
3 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
57 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
58 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
93 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
94 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
97 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
98 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
101 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
109 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
114 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
115 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
116 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
117 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
118 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
119 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
120 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
125 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
128 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
132 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
133 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
134 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
140 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
141 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
142 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
154 3300053089 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 endosphere Metagenome Endosphere
155 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
156 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
157 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
158 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
159 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
160 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
161 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
162 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
166 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.12
Nodule 0
Rhizoplane 0
Rhizosphere 83.63
Stem 0
Stem Tuber 0
Unclassified 6.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3412754 2162886007 Bacteria 11884
2 JGI24739J22299_10002569 3300001989 Bacteria 7000
3 JGI25162J39368_1000755 3300002737 Bacteria 21942
4 JGI25165J46597_1000773 3300003214 Bacteria 24441
5 rootH1_10000675 3300003316 Bacteria 8904
6 rootH2_10016295 3300003320 Bacteria 51846
7 rootH2_10123057 3300003320 Bacteria 6682
8 rootH2_10182882 3300003320 Bacteria 2371
9 rootL2_10091364 3300003322 Bacteria 3266
10 rootL2_10096121 3300003322 Bacteria 1810
11 rootL2_10183019 3300003322 Bacteria 2849
12 rootL2_10268629 3300003322 Bacteria 1080
13 rootH1_10005851 3300003323 Bacteria 85811
14 rootH1_10030117 3300003323 Bacteria 8807
15 rootH1_10194405 3300003323 Bacteria 3066
16 rootH1_10228946 3300003323 Bacteria 3340
17 Ga0065704_10070217 3300005289 Bacteria 69033
18 Ga0070658_10000917 3300005327 Bacteria 25190
19 Ga0070680_100017434 3300005336 Bacteria 5663
20 Ga0070680_100239788 3300005336 Bacteria 1532
21 Ga0070682_100014384 3300005337 Bacteria 4571
22 Ga0070660_100018710 3300005339 Bacteria 5067
23 Ga0070660_100055890 3300005339 Unclassified 3052
24 Ga0070660_100081821 3300005339 Bacteria 2535
25 Ga0070691_10002135 3300005341 Bacteria 8744
26 Ga0070671_100016893 3300005355 Bacteria 5904
27 Ga0070673_100004946 3300005364 Bacteria 8490
28 Ga0070673_100440924 3300005364 Bacteria 1170
29 Ga0070659_100000203 3300005366 Bacteria 46107
30 Ga0070659_100062734 3300005366 Bacteria 2938
31 Ga0070659_100086890 3300005366 Bacteria 2503
32 Ga0070714_100347204 3300005435 Bacteria 1393
33 Ga0070662_100159672 3300005457 Bacteria 1762
34 Ga0070681_10020242 3300005458 Bacteria 6670
35 Ga0070681_10020966 3300005458 Bacteria 6547
36 Ga0068867_100000990 3300005459 Bacteria 19370
37 Ga0070679_100005033 3300005530 Bacteria 12199
38 Ga0070679_100006085 3300005530 Bacteria 11225
39 Ga0070679_100052677 3300005530 Bacteria 4052
40 Ga0070679_100394010 3300005530 Bacteria 1331
41 Ga0068853_100003509 3300005539 Bacteria 11993
42 Ga0068853_100034858 3300005539 Bacteria 4273
43 Ga0068853_100114471 3300005539 Unclassified 2399
44 Ga0070693_100001351 3300005547 Bacteria 11036
45 Ga0070665_100000020 3300005548 Bacteria 389687
46 Ga0070665_100421622 3300005548 Unclassified 1343
47 Ga0068855_100000091 3300005563 Bacteria 110526
48 Ga0068855_100145182 3300005563 Bacteria 2702
49 Ga0068855_100254474 3300005563 Bacteria 1958
50 Ga0068855_100398484 3300005563 Bacteria 1508
51 Ga0068855_100404504 3300005563 Unclassified 1495
52 Ga0068856_100004342 3300005614 Bacteria 14127
53 Ga0068856_100012738 3300005614 Bacteria 8142
54 Ga0068856_100023052 3300005614 Bacteria 6054
55 Ga0068852_100001564 3300005616 Bacteria 15545
56 Ga0068858_100193560 3300005842 Bacteria 1921
57 Ga0068860_100001827 3300005843 Bacteria 22677
58 Ga0075366_10000041 3300006195 Bacteria 45335
59 Ga0075366_10000090 3300006195 Bacteria 36322
60 Ga0075366_10006346 3300006195 Bacteria 6475
61 Ga0075366_10017076 3300006195 Bacteria 4173
62 Ga0097621_100001192 3300006237 Bacteria 18004
63 Ga0097621_100672535 3300006237 Bacteria 951
64 Ga0068871_100000088 3300006358 Bacteria 52878
65 Ga0068871_100001062 3300006358 Bacteria 18427
66 Ga0068871_100266215 3300006358 Bacteria 1496
67 Ga0068865_100001897 3300006881 Bacteria 12289
68 Ga0105240_10000068 3300009093 Bacteria 207756
69 Ga0105240_10013501 3300009093 Bacteria 11218
70 Ga0105240_10066865 3300009093 Bacteria 4457
71 Ga0105240_10087950 3300009093 Bacteria 3803
72 Ga0105240_10118453 3300009093 Bacteria 3191
73 Ga0105240_10135548 3300009093 Bacteria 2949
74 Ga0105240_10207941 3300009093 Bacteria 2289
75 Ga0105240_10325997 3300009093 Bacteria 1749
76 Ga0105240_10350335 3300009093 Bacteria 1675
77 Ga0105240_10394275 3300009093 Bacteria 1561
78 Ga0105243_10137516 3300009148 Bacteria 2080
79 Ga0105241_10000299 3300009174 Bacteria 37072
80 Ga0105241_10002169 3300009174 Bacteria 14783
81 Ga0105241_10009258 3300009174 Bacteria 7242
82 Ga0105241_10300933 3300009174 Bacteria 1377
83 Ga0105242_10658045 3300009176 Bacteria 1020
84 Ga0105237_10000703 3300009545 Bacteria 46391
85 Ga0105237_10000819 3300009545 Bacteria 42544
86 Ga0105237_10002120 3300009545 Bacteria 25043
87 Ga0105237_10005753 3300009545 Bacteria 13931
88 Ga0105237_10062686 3300009545 Bacteria 3718
89 Ga0105237_10157340 3300009545 Bacteria 2269
90 Ga0105238_10602109 3300009551 Bacteria 1107
91 Ga0105239_10000062 3300010375 Bacteria 153782
92 Ga0105239_10000710 3300010375 Bacteria 47192
93 Ga0105239_10001181 3300010375 Bacteria 35807
94 Ga0105239_10003014 3300010375 Bacteria 20985
95 Ga0105239_10004292 3300010375 Bacteria 17092
96 Ga0105239_10025098 3300010375 Bacteria 6566
97 Ga0105239_10048703 3300010375 Bacteria 4647
98 Ga0105239_10127518 3300010375 Bacteria 2829
99 Ga0105239_10266772 3300010375 Bacteria 1925
100 Ga0105239_10401870 3300010375 Bacteria 1550
101 Ga0105246_10138706 3300011119 Bacteria 1826
102 Ga0105246_10448570 3300011119 Bacteria 1083
103 Ga0157373_10000040 3300013100 Bacteria 114771
104 Ga0157373_10000440 3300013100 Bacteria 32951
105 Ga0157373_10000978 3300013100 Bacteria 22107
106 Ga0157371_10000868 3300013102 Bacteria 34292
107 Ga0157371_10002650 3300013102 Bacteria 16949
108 Ga0157371_10003623 3300013102 Bacteria 13903
109 Ga0157371_10042814 3300013102 Bacteria 3227
110 Ga0157371_10086372 3300013102 Bacteria 2222
111 Ga0157371_10127622 3300013102 Bacteria 1809
112 Ga0157371_10512808 3300013102 Bacteria 886
113 Ga0157370_10000313 3300013104 Bacteria 60838
114 Ga0157370_10000775 3300013104 Bacteria 40028
115 Ga0157370_10014842 3300013104 Bacteria 7947
116 Ga0157370_10027681 3300013104 Bacteria 5588
117 Ga0157370_10047565 3300013104 Bacteria 4112
118 Ga0157370_10306262 3300013104 Bacteria 1466
119 Ga0157369_10064947 3300013105 Bacteria 3930
120 Ga0157369_10272085 3300013105 Bacteria 1765
121 Ga0157374_10008877 3300013296 Bacteria 8608
122 Ga0157374_10038138 3300013296 Bacteria 4416
123 Ga0157374_10157416 3300013296 Bacteria 2212
124 Ga0157374_10219421 3300013296 Bacteria 1866
125 Ga0157374_10224810 3300013296 Bacteria 1843
126 Ga0157374_10265158 3300013296 Bacteria 1693
127 Ga0157374_10618709 3300013296 Bacteria 1094
128 Ga0157378_10004272 3300013297 Bacteria 12592
129 Ga0157378_10043734 3300013297 Bacteria 3977
130 Ga0163162_10000321 3300013306 Bacteria 44220
131 Ga0163162_10001597 3300013306 Bacteria 21190
132 Ga0163162_10007807 3300013306 Bacteria 10431
133 Ga0163162_11615240 3300013306 Bacteria 740
134 Ga0157372_10001538 3300013307 Bacteria 25109
135 Ga0157372_10036181 3300013307 Bacteria 5441
136 Ga0157372_10047395 3300013307 Bacteria 4776
137 Ga0157372_10114788 3300013307 Bacteria 3088
138 Ga0157372_10198461 3300013307 Bacteria 2324
139 Ga0157372_10343450 3300013307 Bacteria 1739
140 Ga0157375_10038721 3300013308 Bacteria 4580
141 Ga0157375_10043913 3300013308 Bacteria 4337
142 Ga0157377_10095924 3300014745 Bacteria 1759
143 Ga0157376_10010695 3300014969 Bacteria 6727
144 Ga0182006_1001021 3300015261 Bacteria 18288
145 Ga0213872_10043509 3300021361 Bacteria 2046
146 Ga0207427_100025 3300025231 Bacteria 433726
147 Ga0209437_100010 3300025233 Bacteria 838447
148 Ga0209437_100017 3300025233 Bacteria 694471
149 Ga0209258_100145 3300025242 Bacteria 163672
150 Ga0209026_1000251 3300025250 Bacteria 67956
151 Ga0209148_1000177 3300025254 Bacteria 127365
152 Ga0209233_1000017 3300025261 Bacteria 898076
153 Ga0209233_1002900 3300025261 Bacteria 6128
154 Ga0209455_1002123 3300025272 Bacteria 7863
155 Ga0207647_10000273 3300025904 Bacteria 41974
156 Ga0207647_10048032 3300025904 Bacteria 2652
157 Ga0207647_10129990 3300025904 Bacteria 1481
158 Ga0207647_10202577 3300025904 Bacteria 1147
159 Ga0207647_10346314 3300025904 Bacteria 842
160 Ga0207645_10000413 3300025907 Bacteria 35446
161 Ga0207705_10000833 3300025909 Bacteria 25202
162 Ga0207705_10051876 3300025909 Unclassified 2952
163 Ga0207705_10173863 3300025909 Bacteria 1622
164 Ga0207654_10001398 3300025911 Bacteria 12789
165 Ga0207654_10002165 3300025911 Bacteria 10056
166 Ga0207707_10000467 3300025912 Bacteria 41919
167 Ga0207707_10012948 3300025912 Bacteria 7262
168 Ga0207707_10051809 3300025912 Bacteria 3574
169 Ga0207695_10000131 3300025913 Bacteria 223762
170 Ga0207695_10003229 3300025913 Bacteria 23197
171 Ga0207695_10038492 3300025913 Bacteria 5148
172 Ga0207695_10087079 3300025913 Bacteria 3147
173 Ga0207695_10208269 3300025913 Bacteria 1867
174 Ga0207695_10422385 3300025913 Bacteria 1217
175 Ga0207695_10621205 3300025913 Bacteria 962
176 Ga0207671_10001916 3300025914 Bacteria 23094
177 Ga0207671_10004065 3300025914 Bacteria 14180
178 Ga0207671_10026865 3300025914 Unclassified 4306
179 Ga0207671_10029139 3300025914 Bacteria 4124
180 Ga0207660_10011969 3300025917 Bacteria 5664
181 Ga0207660_10015898 3300025917 Bacteria 4975
182 Ga0207657_10037403 3300025919 Bacteria 4334
183 Ga0207657_10106328 3300025919 Bacteria 2322
184 Ga0207652_10000160 3300025921 Bacteria 72867
185 Ga0207652_10007289 3300025921 Bacteria 8909
186 Ga0207652_10037637 3300025921 Bacteria 4095
187 Ga0207652_10087292 3300025921 Bacteria 2735
188 Ga0207694_10612752 3300025924 Bacteria 916
189 Ga0207644_10029644 3300025931 Bacteria 3798
190 Ga0207690_10000212 3300025932 Bacteria 44164
191 Ga0207690_10209873 3300025932 Bacteria 1484
192 Ga0207706_10000322 3300025933 Bacteria 51749
193 Ga0207709_10309790 3300025935 Bacteria 1177
194 Ga0207669_10238703 3300025937 Bacteria 1346
195 Ga0207704_10000192 3300025938 Bacteria 32150
196 Ga0207661_10005171 3300025944 Bacteria 9175
197 Ga0207667_10000430 3300025949 Bacteria 56466
198 Ga0207667_10000439 3300025949 Bacteria 55776
199 Ga0207667_10022210 3300025949 Bacteria 7016
200 Ga0207667_10113840 3300025949 Bacteria 2789
201 Ga0207667_10507617 3300025949 Bacteria 1222
202 Ga0207651_10708239 3300025960 Bacteria 887
203 Ga0207639_10003435 3300026041 Bacteria 10657
204 Ga0207639_10060927 3300026041 Unclassified 2912
205 Ga0207639_10892670 3300026041 Bacteria 831
206 Ga0207702_10000165 3300026078 Bacteria 79066
207 Ga0207702_10003128 3300026078 Bacteria 15352
208 Ga0207702_10077155 3300026078 Bacteria 2881
209 Ga0207702_10126314 3300026078 Bacteria 2297
210 Ga0207648_10000287 3300026089 Bacteria 54959
211 Ga0207683_10019900 3300026121 Bacteria 5736
212 Ga0207698_10007255 3300026142 Bacteria 6945
213 Ga0268266_10000018 3300028379 Bacteria 569141
214 Ga0268264_10037512 3300028381 Bacteria 3996
215 Ga0265334_10059659 3300028573 Unclassified 1441
216 Ga0307517_10000929 3300028786 Bacteria 49793
217 Ga0307517_10001574 3300028786 Bacteria 38060
218 Ga0307515_10004006 3300028794 Bacteria 30751
219 Ga0307515_10009296 3300028794 Bacteria 19016
220 Ga0307515_10061972 3300028794 Bacteria 5293
221 Ga0265338_10217381 3300028800 Unclassified 1430
222 Ga0265324_10033008 3300029957 Unclassified 1808
223 Ga0307511_10000046 3300030521 Bacteria 100284
224 Ga0265314_10044852 3300031711 Bacteria 3130
225 Ga0307412_10000049 3300031911 Bacteria 151588
226 Ga0307414_10000142 3300032004 Bacteria 48979
227 Ga0307507_10002519 3300033179 Bacteria 38243
228 Ga0395899_0000177 3300037312 Bacteria 94226
229 Ga0395899_0036289 3300037312 Bacteria 3698
230 Ga0395899_0053460 3300037312 Bacteria 2990
231 Ga0395899_0166096 3300037312 Bacteria 1557
232 Ga0395899_0218124 3300037312 Unclassified 1322
233 Ga0395900_0001123 3300037418 Bacteria 33875
234 Ga0395900_0005801 3300037418 Bacteria 12900
235 Ga0395900_0032655 3300037418 Bacteria 5353
236 Ga0395900_0076582 3300037418 Bacteria 3437
237 Ga0395900_0112314 3300037418 Bacteria 2798
238 Ga0395900_0129072 3300037418 Bacteria 2591
239 Ga0395898_0012861 3300037466 Bacteria 8633
240 Ga0395898_0225870 3300037466 Bacteria 1786
241 Ga0395898_0489886 3300037466 Unclassified 1169
242 Ga0395905_0004015 3300037471 Bacteria 15448
243 Ga0395905_0005280 3300037471 Bacteria 13209
244 Ga0395901_0004466 3300038443 Bacteria 14115
245 Ga0395901_0093566 3300038443 Unclassified 3147
246 Ga0395901_0146251 3300038443 Bacteria 2484
247 Ga0395901_0184585 3300038443 Unclassified 2187
248 Ga0395901_0663555 3300038443 Bacteria 1044
249 Ga0436361_1156458 3300039447 Bacteria 9894
250 Ga0451577_0000112 3300042876 Bacteria 177581
251 Ga0451577_0031815 3300042876 Bacteria 4759
252 Ga0451577_0159003 3300042876 Bacteria 2034
253 Ga0453683_0016850 3300044673 Unclassified 4710
254 Ga0453684_0000398 3300044712 Bacteria 178891
255 Ga0453684_0086799 3300044712 Bacteria 3881
256 Ga0453684_0476931 3300044712 Bacteria 1384
257 Ga0451576_0000150 3300045051 Bacteria 177361
258 Ga0451576_0056185 3300045051 Bacteria 4117
259 Ga0451576_0418493 3300045051 Bacteria 1406
260 Ga0495629_0111757 3300046459 Bacteria 1905
261 Ga0495650_0000098 3300046471 Bacteria 215716
262 Ga0495580_0122560 3300046472 Unclassified 1805
263 Ga0495662_0260232 3300046476 Unclassified 854
264 Ga0495585_0000029 3300046492 Bacteria 145822
265 Ga0495585_0000330 3300046492 Bacteria 46311
266 Ga0495596_0015686 3300046500 Bacteria 3165
267 Ga0495583_0063314 3300046506 Bacteria 1644
268 Ga0495610_0001345 3300046512 Bacteria 21797
269 Ga0495616_0000972 3300046513 Bacteria 20531
270 Ga0495628_0366524 3300046516 Bacteria 1057
271 Ga0495630_0069687 3300046517 Bacteria 2646
272 Ga0495631_0026528 3300046518 Bacteria 2659
273 Ga0495648_0002046 3300046524 Bacteria 19132
274 Ga0495648_0048523 3300046524 Bacteria 2613
275 Ga0495663_0028805 3300046525 Bacteria 1637
276 Ga0495665_0063067 3300046531 Bacteria 1957
277 Ga0495586_0030640 3300046535 Bacteria 2879
278 Ga0495633_0000014 3300046558 Bacteria 261742
279 Ga0495633_0000879 3300046558 Bacteria 25944
280 Ga0495633_0124918 3300046558 Bacteria 1191
281 Ga0495668_0000003 3300046616 Bacteria 695023
282 Ga0495668_0124945 3300046616 Bacteria 1408
283 Ga0495625_0000669 3300046660 Bacteria 48864
284 Ga0495625_0001390 3300046660 Bacteria 29676
285 Ga0495625_0003408 3300046660 Bacteria 15900
286 Ga0495625_0163193 3300046660 Bacteria 1491
287 Ga0495635_0050064 3300046663 Bacteria 2880
288 Ga0495661_0010172 3300046665 Bacteria 6428
289 Ga0495657_0096047 3300046675 Bacteria 1894
290 Ga0495623_0236117 3300046679 Bacteria 1035
291 Ga0495658_0023834 3300046683 Bacteria 3252
292 Ga0495649_0000226 3300046694 Bacteria 49102
293 Ga0495604_0063886 3300047317 Bacteria 2807
294 Ga0495674_0054027 3300047319 Bacteria 3529
295 Ga0495683_0038396 3300047323 Bacteria 2425
296 Ga0495687_008755 3300047443 Bacteria 5749
297 Ga0495687_076577 3300047443 Bacteria 1323
298 Ga0495677_0055975 3300047445 Bacteria 1456
299 Ga0495673_0014365 3300047469 Bacteria 4119
300 Ga0495686_0033182 3300047472 Bacteria 3335
301 Ga0495686_0059289 3300047472 Bacteria 2383
302 Ga0495686_0073669 3300047472 Bacteria 2097
303 Ga0495686_0137408 3300047472 Bacteria 1444
304 Ga0501034_0103464 3300049571 Bacteria 2841
305 Ga0501047_0204611 3300049581 Unclassified 1834
306 Ga0501070_0024601 3300049586 Bacteria 5049
307 Ga0501070_0160889 3300049586 Bacteria 1851
308 Ga0501071_0458604 3300049587 Unclassified 976
309 Ga0501073_0041045 3300049589 Bacteria 3270
310 Ga0501074_0161383 3300049590 Bacteria 1601
311 Ga0501083_0043241 3300049744 Bacteria 3052
312 Ga0501241_020497 3300049758 Bacteria 1216
313 Ga0501044_0075523 3300049823 Bacteria 3422
314 nmdc:mga0k408_14835_c1 3300050493 Bacteria 4300
315 nmdc:mga0k408_158_c1 3300050493 Bacteria 35033
316 nmdc:mga0k408_16_c2 3300050493 Bacteria 101089
317 nmdc:mga0k408_6337_c1 3300050493 Bacteria 6314
318 Ga0500581_061199 3300053089 Bacteria 1907
319 Ga0500646_0030026 3300053090 Bacteria 1490
320 Ga0500583_0032544 3300053092 Unclassified 2301
321 Ga0500651_0000202 3300053093 Bacteria 37847
322 Ga0500569_005263 3300053109 Unclassified 2772
323 Ga0500618_012505 3300053125 Bacteria 2222
324 Ga0500658_0001493 3300053134 Bacteria 9365
325 Ga0500559_0033532 3300053136 Bacteria 2211
326 Ga0500577_0079747 3300053142 Bacteria 1302
327 Ga0500616_0011853 3300053153 Bacteria 5127
328 Ga0500616_0144079 3300053153 Viruses 1110
329 Ga0500622_0001592 3300053156 Bacteria 17863
330 Ga0500633_0016638 3300053160 Bacteria 2139
331 Ga0500633_0058460 3300053160 Bacteria 1351
332 Ga0500634_0037450 3300053161 Bacteria 2638
333 Ga0501084_0164316 3300054114 Bacteria 1873
334 Ga0500661_008164 3300055283 Bacteria 1925

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2852627209 2852629240 226
2 3300047472 Ga0495686_0137408 Ga0495686_0137408_577_1263 227
3 3300003322 rootL2_10096121 rootL2_100961213 228
4 3300003323 rootH1_10030117 rootH1_100301177 228
5 3300013104 Ga0157370_10000775 Ga0157370_1000077534 228
6 3300025904 Ga0207647_10346314 Ga0207647_103463141 228
7 3300047472 Ga0495686_0033182 Ga0495686_0033182_1045_1752 228
8 3300050493 nmdc:mga0k408_158_c1 nmdc:mga0k408_158_c1_6927_7613 228
9 3300001989 JGI24739J22299_10002569 JGI24739J22299_100025697 229
10 3300002737 JGI25162J39368_1000755 JGI25162J39368_100075516 229
11 3300003214 JGI25165J46597_1000773 JGI25165J46597_100077317 229
12 3300003316 rootH1_10000675 rootH1_100006755 229
13 3300003320 rootH2_10016295 rootH2_1001629535 229
14 3300003320 rootH2_10123057 rootH2_101230579 229
15 3300003320 rootH2_10182882 rootH2_101828822 229
16 3300003322 rootL2_10091364 rootL2_100913642 229
17 3300003322 rootL2_10183019 rootL2_101830192 229
18 3300003323 rootH1_10005851 rootH1_100058517 229
19 3300005327 Ga0070658_10000917 Ga0070658_1000091722 229
20 3300005336 Ga0070680_100017434 Ga0070680_1000174341 229
21 3300005339 Ga0070660_100018710 Ga0070660_1000187104 229
22 3300005339 Ga0070660_100081821 Ga0070660_1000818212 229
23 3300005355 Ga0070671_100016893 Ga0070671_1000168935 229
24 3300005364 Ga0070673_100004946 Ga0070673_1000049465 229
25 3300005364 Ga0070673_100440924 Ga0070673_1004409242 229
26 3300005366 Ga0070659_100000203 Ga0070659_10000020337 229
27 3300005366 Ga0070659_100062734 Ga0070659_1000627342 229
28 3300005457 Ga0070662_100159672 Ga0070662_1001596722 229
29 3300005458 Ga0070681_10020242 Ga0070681_100202422 229
30 3300005459 Ga0068867_100000990 Ga0068867_1000009902 229
31 3300005530 Ga0070679_100005033 Ga0070679_1000050332 229
32 3300005539 Ga0068853_100003509 Ga0068853_1000035092 229
33 3300005539 Ga0068853_100034858 Ga0068853_1000348582 229
34 3300005548 Ga0070665_100000020 Ga0070665_10000002069 229
35 3300005548 Ga0070665_100421622 Ga0070665_1004216222 229
36 3300005563 Ga0068855_100000091 Ga0068855_10000009167 229
37 3300005563 Ga0068855_100254474 Ga0068855_1002544742 229
38 3300005614 Ga0068856_100004342 Ga0068856_1000043428 229
39 3300005614 Ga0068856_100023052 Ga0068856_1000230525 229
40 3300005616 Ga0068852_100001564 Ga0068852_1000015642 229
41 3300005842 Ga0068858_100193560 Ga0068858_1001935602 229
42 3300006195 Ga0075366_10000090 Ga0075366_100000906 229
43 3300006195 Ga0075366_10006346 Ga0075366_100063465 229
44 3300006237 Ga0097621_100001192 Ga0097621_1000011922 229
45 3300006358 Ga0068871_100000088 Ga0068871_10000008811 229
46 3300006881 Ga0068865_100001897 Ga0068865_1000018976 229
47 3300009093 Ga0105240_10000068 Ga0105240_10000068129 229
48 3300009093 Ga0105240_10066865 Ga0105240_100668654 229
49 3300009093 Ga0105240_10087950 Ga0105240_100879503 229
50 3300009093 Ga0105240_10118453 Ga0105240_101184534 229
51 3300009093 Ga0105240_10207941 Ga0105240_102079412 229
52 3300009093 Ga0105240_10325997 Ga0105240_103259972 229
53 3300009093 Ga0105240_10350335 Ga0105240_103503352 229
54 3300009093 Ga0105240_10394275 Ga0105240_103942752 229
55 3300009148 Ga0105243_10137516 Ga0105243_101375164 229
56 3300009174 Ga0105241_10002169 Ga0105241_100021699 229
57 3300009174 Ga0105241_10009258 Ga0105241_100092583 229
58 3300009174 Ga0105241_10300933 Ga0105241_103009332 229
59 3300009176 Ga0105242_10658045 Ga0105242_106580451 229
60 3300009545 Ga0105237_10000703 Ga0105237_100007033 229
61 3300009545 Ga0105237_10000819 Ga0105237_1000081918 229
62 3300009545 Ga0105237_10002120 Ga0105237_1000212024 229
63 3300009545 Ga0105237_10005753 Ga0105237_100057538 229
64 3300009545 Ga0105237_10157340 Ga0105237_101573403 229
65 3300009551 Ga0105238_10602109 Ga0105238_106021091 229
66 3300010375 Ga0105239_10000710 Ga0105239_1000071046 229
67 3300010375 Ga0105239_10001181 Ga0105239_1000118114 229
68 3300010375 Ga0105239_10025098 Ga0105239_100250984 229
69 3300010375 Ga0105239_10048703 Ga0105239_100487034 229
70 3300010375 Ga0105239_10127518 Ga0105239_101275182 229
71 3300010375 Ga0105239_10266772 Ga0105239_102667722 229
72 3300010375 Ga0105239_10401870 Ga0105239_104018702 229
73 3300011119 Ga0105246_10138706 Ga0105246_101387062 229
74 3300011119 Ga0105246_10448570 Ga0105246_104485702 229
75 3300013102 Ga0157371_10042814 Ga0157371_100428143 229
76 3300013102 Ga0157371_10086372 Ga0157371_100863724 229
77 3300013104 Ga0157370_10306262 Ga0157370_103062622 229
78 3300013296 Ga0157374_10008877 Ga0157374_100088774 229
79 3300013296 Ga0157374_10038138 Ga0157374_100381383 229
80 3300013296 Ga0157374_10157416 Ga0157374_101574162 229
81 3300013296 Ga0157374_10219421 Ga0157374_102194212 229
82 3300013296 Ga0157374_10224810 Ga0157374_102248101 229
83 3300013296 Ga0157374_10265158 Ga0157374_102651582 229
84 3300013296 Ga0157374_10618709 Ga0157374_106187092 229
85 3300013297 Ga0157378_10004272 Ga0157378_100042721 229
86 3300013297 Ga0157378_10043734 Ga0157378_100437342 229
87 3300013306 Ga0163162_10001597 Ga0163162_100015974 229
88 3300013307 Ga0157372_10047395 Ga0157372_100473954 229
89 3300013308 Ga0157375_10038721 Ga0157375_100387212 229
90 3300013308 Ga0157375_10043913 Ga0157375_100439133 229
91 3300014745 Ga0157377_10095924 Ga0157377_100959242 229
92 3300021361 Ga0213872_10043509 Ga0213872_100435092 229
93 3300025231 Ga0207427_100025 Ga0207427_100025197 229
94 3300025233 Ga0209437_100010 Ga0209437_100010459 229
95 3300025261 Ga0209233_1000017 Ga0209233_1000017472 229
96 3300025261 Ga0209233_1002900 Ga0209233_10029002 229
97 3300025272 Ga0209455_1002123 Ga0209455_10021238 229
98 3300025904 Ga0207647_10000273 Ga0207647_1000027319 229
99 3300025904 Ga0207647_10048032 Ga0207647_100480321 229
100 3300025904 Ga0207647_10202577 Ga0207647_102025772 229
101 3300025907 Ga0207645_10000413 Ga0207645_1000041321 229
102 3300025909 Ga0207705_10000833 Ga0207705_1000083324 229
103 3300025911 Ga0207654_10001398 Ga0207654_100013987 229
104 3300025912 Ga0207707_10051809 Ga0207707_100518092 229
105 3300025913 Ga0207695_10000131 Ga0207695_10000131129 229
106 3300025913 Ga0207695_10003229 Ga0207695_100032298 229
107 3300025913 Ga0207695_10038492 Ga0207695_100384922 229
108 3300025913 Ga0207695_10087079 Ga0207695_100870794 229
109 3300025913 Ga0207695_10208269 Ga0207695_102082694 229
110 3300025913 Ga0207695_10422385 Ga0207695_104223851 229
111 3300025914 Ga0207671_10001916 Ga0207671_100019163 229
112 3300025914 Ga0207671_10004065 Ga0207671_1000406511 229
113 3300025914 Ga0207671_10029139 Ga0207671_100291393 229
114 3300025917 Ga0207660_10011969 Ga0207660_100119696 229
115 3300025919 Ga0207657_10106328 Ga0207657_101063282 229
116 3300025921 Ga0207652_10037637 Ga0207652_100376372 229
117 3300025924 Ga0207694_10612752 Ga0207694_106127521 229
118 3300025931 Ga0207644_10029644 Ga0207644_100296443 229
119 3300025932 Ga0207690_10000212 Ga0207690_1000021236 229
120 3300025933 Ga0207706_10000322 Ga0207706_1000032236 229
121 3300025935 Ga0207709_10309790 Ga0207709_103097902 229
122 3300025937 Ga0207669_10238703 Ga0207669_102387032 229
123 3300025938 Ga0207704_10000192 Ga0207704_100001926 229
124 3300025949 Ga0207667_10000430 Ga0207667_1000043042 229
125 3300025949 Ga0207667_10000439 Ga0207667_1000043931 229
126 3300025960 Ga0207651_10708239 Ga0207651_107082392 229
127 3300026041 Ga0207639_10003435 Ga0207639_100034356 229
128 3300026041 Ga0207639_10892670 Ga0207639_108926701 229
129 3300026078 Ga0207702_10000165 Ga0207702_1000016554 229
130 3300026078 Ga0207702_10077155 Ga0207702_100771552 229
131 3300026078 Ga0207702_10126314 Ga0207702_101263142 229
132 3300026089 Ga0207648_10000287 Ga0207648_1000028719 229
133 3300026121 Ga0207683_10019900 Ga0207683_100199005 229
134 3300026142 Ga0207698_10007255 Ga0207698_100072553 229
135 3300028379 Ga0268266_10000018 Ga0268266_10000018152 229
136 3300028786 Ga0307517_10000929 Ga0307517_100009297 229
137 3300028786 Ga0307517_10001574 Ga0307517_1000157419 229
138 3300028794 Ga0307515_10061972 Ga0307515_100619722 229
139 3300028800 Ga0265338_10217381 Ga0265338_102173811 229
140 3300030521 Ga0307511_10000046 Ga0307511_1000004643 229
141 3300037312 Ga0395899_0000177 Ga0395899_0000177_62201_62896 229
142 3300037312 Ga0395899_0053460 Ga0395899_0053460_469_1161 229
143 3300037418 Ga0395900_0001123 Ga0395900_0001123_9597_10292 229
144 3300037418 Ga0395900_0005801 Ga0395900_0005801_7596_8288 229
145 3300037466 Ga0395898_0225870 Ga0395898_0225870_761_1453 229
146 3300037471 Ga0395905_0004015 Ga0395905_0004015_9929_10621 229
147 3300038443 Ga0395901_0004466 Ga0395901_0004466_11039_11731 229
148 3300039447 Ga0436361_1156458 Ga0436361_1156458_1276_1974 229
149 3300042876 Ga0451577_0031815 Ga0451577_0031815_2580_3272 229
150 3300044712 Ga0453684_0476931 Ga0453684_0476931_447_1139 229
151 3300045051 Ga0451576_0418493 Ga0451576_0418493_544_1236 229
152 3300046459 Ga0495629_0111757 Ga0495629_0111757_953_1663 229
153 3300046471 Ga0495650_0000098 Ga0495650_0000098_72095_72793 229
154 3300046472 Ga0495580_0122560 Ga0495580_0122560_751_1461 229
155 3300046476 Ga0495662_0260232 Ga0495662_0260232_117_827 229
156 3300046492 Ga0495585_0000029 Ga0495585_0000029_59248_59946 229
157 3300046500 Ga0495596_0015686 Ga0495596_0015686_1802_2503 229
158 3300046506 Ga0495583_0063314 Ga0495583_0063314_115_813 229
159 3300046512 Ga0495610_0001345 Ga0495610_0001345_3016_3714 229
160 3300046513 Ga0495616_0000972 Ga0495616_0000972_4559_5257 229
161 3300046517 Ga0495630_0069687 Ga0495630_0069687_819_1529 229
162 3300046518 Ga0495631_0026528 Ga0495631_0026528_407_1108 229
163 3300046531 Ga0495665_0063067 Ga0495665_0063067_1175_1885 229
164 3300046535 Ga0495586_0030640 Ga0495586_0030640_529_1239 229
165 3300046558 Ga0495633_0000879 Ga0495633_0000879_21009_21707 229
166 3300046558 Ga0495633_0124918 Ga0495633_0124918_389_1081 229
167 3300046616 Ga0495668_0124945 Ga0495668_0124945_672_1364 229
168 3300046660 Ga0495625_0001390 Ga0495625_0001390_18282_18980 229
169 3300046663 Ga0495635_0050064 Ga0495635_0050064_1702_2412 229
170 3300046665 Ga0495661_0010172 Ga0495661_0010172_5617_6315 229
171 3300046675 Ga0495657_0096047 Ga0495657_0096047_1085_1795 229
172 3300046679 Ga0495623_0236117 Ga0495623_0236117_203_913 229
173 3300046683 Ga0495658_0023834 Ga0495658_0023834_1682_2392 229
174 3300046694 Ga0495649_0000226 Ga0495649_0000226_18216_18914 229
175 3300047317 Ga0495604_0063886 Ga0495604_0063886_302_1012 229
176 3300047319 Ga0495674_0054027 Ga0495674_0054027_2189_2899 229
177 3300047323 Ga0495683_0038396 Ga0495683_0038396_495_1199 229
178 3300047443 Ga0495687_008755 Ga0495687_008755_3853_4551 229
179 3300047443 Ga0495687_076577 Ga0495687_076577_539_1237 229
180 3300047445 Ga0495677_0055975 Ga0495677_0055975_314_1006 229
181 3300047469 Ga0495673_0014365 Ga0495673_0014365_2245_2943 229
182 3300047472 Ga0495686_0059289 Ga0495686_0059289_428_1129 229
183 3300050493 nmdc:mga0k408_6337_c1 nmdc:mga0k408_6337_c1_4931_5629 229
184 3300053125 Ga0500618_012505 Ga0500618_012505_69_767 229
185 3300053156 Ga0500622_0001592 Ga0500622_0001592_3767_4465 229
186 3300053160 Ga0500633_0016638 Ga0500633_0016638_1289_1990 229
187 3300053161 Ga0500634_0037450 Ga0500634_0037450_1661_2362 229
188 3300055283 Ga0500661_008164 Ga0500661_008164_889_1587 229
189 2162886007 SwRhRL2b_contig_3412754 SwRhRL2b_0083.00005800 230
190 3300003322 rootL2_10268629 rootL2_102686291 230
191 3300003323 rootH1_10194405 rootH1_101944053 230
192 3300003323 rootH1_10228946 rootH1_102289463 230
193 3300005289 Ga0065704_10070217 Ga0065704_1007021767 230
194 3300005336 Ga0070680_100239788 Ga0070680_1002397881 230
195 3300005337 Ga0070682_100014384 Ga0070682_1000143842 230
196 3300005339 Ga0070660_100055890 Ga0070660_1000558902 230
197 3300005341 Ga0070691_10002135 Ga0070691_100021354 230
198 3300005366 Ga0070659_100086890 Ga0070659_1000868902 230
199 3300005435 Ga0070714_100347204 Ga0070714_1003472042 230
200 3300005458 Ga0070681_10020966 Ga0070681_100209666 230
201 3300005530 Ga0070679_100006085 Ga0070679_1000060858 230
202 3300005530 Ga0070679_100052677 Ga0070679_1000526774 230
203 3300005530 Ga0070679_100394010 Ga0070679_1003940101 230
204 3300005539 Ga0068853_100114471 Ga0068853_1001144712 230
205 3300005547 Ga0070693_100001351 Ga0070693_1000013514 230
206 3300005563 Ga0068855_100145182 Ga0068855_1001451822 230
207 3300005563 Ga0068855_100398484 Ga0068855_1003984841 230
208 3300005563 Ga0068855_100404504 Ga0068855_1004045042 230
209 3300005614 Ga0068856_100012738 Ga0068856_1000127381 230
210 3300005843 Ga0068860_100001827 Ga0068860_1000018273 230
211 3300006195 Ga0075366_10000041 Ga0075366_1000004122 230
212 3300006195 Ga0075366_10017076 Ga0075366_100170763 230
213 3300006237 Ga0097621_100672535 Ga0097621_1006725351 230
214 3300006358 Ga0068871_100001062 Ga0068871_10000106216 230
215 3300006358 Ga0068871_100266215 Ga0068871_1002662153 230
216 3300009093 Ga0105240_10013501 Ga0105240_100135014 230
217 3300009093 Ga0105240_10135548 Ga0105240_101355482 230
218 3300009174 Ga0105241_10000299 Ga0105241_100002997 230
219 3300009545 Ga0105237_10062686 Ga0105237_100626862 230
220 3300010375 Ga0105239_10000062 Ga0105239_1000006228 230
221 3300010375 Ga0105239_10003014 Ga0105239_1000301416 230
222 3300010375 Ga0105239_10004292 Ga0105239_100042927 230
223 3300013100 Ga0157373_10000040 Ga0157373_1000004025 230
224 3300013100 Ga0157373_10000440 Ga0157373_100004405 230
225 3300013100 Ga0157373_10000978 Ga0157373_100009787 230
226 3300013102 Ga0157371_10000868 Ga0157371_100008687 230
227 3300013102 Ga0157371_10002650 Ga0157371_1000265015 230
228 3300013102 Ga0157371_10003623 Ga0157371_1000362316 230
229 3300013102 Ga0157371_10127622 Ga0157371_101276221 230
230 3300013102 Ga0157371_10512808 Ga0157371_105128081 230
231 3300013104 Ga0157370_10000313 Ga0157370_1000031359 230
232 3300013104 Ga0157370_10014842 Ga0157370_100148424 230
233 3300013104 Ga0157370_10027681 Ga0157370_100276813 230
234 3300013104 Ga0157370_10047565 Ga0157370_100475653 230
235 3300013105 Ga0157369_10064947 Ga0157369_100649472 230
236 3300013105 Ga0157369_10272085 Ga0157369_102720852 230
237 3300013306 Ga0163162_10000321 Ga0163162_1000032134 230
238 3300013306 Ga0163162_10007807 Ga0163162_100078073 230
239 3300013306 Ga0163162_11615240 Ga0163162_116152401 230
240 3300013307 Ga0157372_10001538 Ga0157372_100015384 230
241 3300013307 Ga0157372_10036181 Ga0157372_100361815 230
242 3300013307 Ga0157372_10114788 Ga0157372_101147883 230
243 3300013307 Ga0157372_10198461 Ga0157372_101984612 230
244 3300013307 Ga0157372_10343450 Ga0157372_103434502 230
245 3300014969 Ga0157376_10010695 Ga0157376_100106954 230
246 3300015261 Ga0182006_1001021 Ga0182006_10010214 230
247 3300025233 Ga0209437_100017 Ga0209437_10001795 230
248 3300025242 Ga0209258_100145 Ga0209258_10014538 230
249 3300025250 Ga0209026_1000251 Ga0209026_100025153 230
250 3300025254 Ga0209148_1000177 Ga0209148_1000177112 230
251 3300025904 Ga0207647_10129990 Ga0207647_101299902 230
252 3300025909 Ga0207705_10051876 Ga0207705_100518763 230
253 3300025909 Ga0207705_10173863 Ga0207705_101738632 230
254 3300025911 Ga0207654_10002165 Ga0207654_100021654 230
255 3300025912 Ga0207707_10000467 Ga0207707_100004674 230
256 3300025912 Ga0207707_10012948 Ga0207707_100129486 230
257 3300025913 Ga0207695_10621205 Ga0207695_106212051 230
258 3300025914 Ga0207671_10026865 Ga0207671_100268652 230
259 3300025917 Ga0207660_10015898 Ga0207660_100158982 230
260 3300025919 Ga0207657_10037403 Ga0207657_100374033 230
261 3300025921 Ga0207652_10000160 Ga0207652_1000016019 230
262 3300025921 Ga0207652_10007289 Ga0207652_100072897 230
263 3300025921 Ga0207652_10087292 Ga0207652_100872921 230
264 3300025932 Ga0207690_10209873 Ga0207690_102098732 230
265 3300025944 Ga0207661_10005171 Ga0207661_100051717 230
266 3300025949 Ga0207667_10022210 Ga0207667_100222102 230
267 3300025949 Ga0207667_10113840 Ga0207667_101138402 230
268 3300025949 Ga0207667_10507617 Ga0207667_105076172 230
269 3300026041 Ga0207639_10060927 Ga0207639_100609274 230
270 3300026078 Ga0207702_10003128 Ga0207702_1000312810 230
271 3300028381 Ga0268264_10037512 Ga0268264_100375123 230
272 3300028573 Ga0265334_10059659 Ga0265334_100596591 230
273 3300028794 Ga0307515_10004006 Ga0307515_1000400629 230
274 3300028794 Ga0307515_10009296 Ga0307515_1000929611 230
275 3300029957 Ga0265324_10033008 Ga0265324_100330082 230
276 3300031711 Ga0265314_10044852 Ga0265314_100448523 230
277 3300031911 Ga0307412_10000049 Ga0307412_1000004993 230
278 3300032004 Ga0307414_10000142 Ga0307414_1000014222 230
279 3300033179 Ga0307507_10002519 Ga0307507_100025193 230
280 3300037312 Ga0395899_0036289 Ga0395899_0036289_2134_2829 230
281 3300037312 Ga0395899_0166096 Ga0395899_0166096_286_993 230
282 3300037312 Ga0395899_0218124 Ga0395899_0218124_32_727 230
283 3300037418 Ga0395900_0032655 Ga0395900_0032655_129_824 230
284 3300037418 Ga0395900_0076582 Ga0395900_0076582_32_727 230
285 3300037418 Ga0395900_0112314 Ga0395900_0112314_331_1038 230
286 3300037418 Ga0395900_0129072 Ga0395900_0129072_1082_1777 230
287 3300037466 Ga0395898_0012861 Ga0395898_0012861_257_952 230
288 3300037466 Ga0395898_0489886 Ga0395898_0489886_443_1138 230
289 3300037471 Ga0395905_0005280 Ga0395905_0005280_832_1527 230
290 3300038443 Ga0395901_0093566 Ga0395901_0093566_1082_1777 230
291 3300038443 Ga0395901_0146251 Ga0395901_0146251_1301_2008 230
292 3300038443 Ga0395901_0184585 Ga0395901_0184585_1461_2156 230
293 3300038443 Ga0395901_0663555 Ga0395901_0663555_113_808 230
294 3300042876 Ga0451577_0000112 Ga0451577_0000112_60246_60956 230
295 3300042876 Ga0451577_0159003 Ga0451577_0159003_887_1582 230
296 3300044673 Ga0453683_0016850 Ga0453683_0016850_3573_4268 230
297 3300044712 Ga0453684_0000398 Ga0453684_0000398_60095_60805 230
298 3300044712 Ga0453684_0086799 Ga0453684_0086799_454_1200 230
299 3300045051 Ga0451576_0000150 Ga0451576_0000150_71389_72099 230
300 3300045051 Ga0451576_0056185 Ga0451576_0056185_3095_3841 230
301 3300046492 Ga0495585_0000330 Ga0495585_0000330_44220_44921 230
302 3300046516 Ga0495628_0366524 Ga0495628_0366524_344_1045 230
303 3300046524 Ga0495648_0002046 Ga0495648_0002046_6855_7556 230
304 3300046524 Ga0495648_0048523 Ga0495648_0048523_1531_2232 230
305 3300046525 Ga0495663_0028805 Ga0495663_0028805_103_804 230
306 3300046558 Ga0495633_0000014 Ga0495633_0000014_55679_56380 230
307 3300046616 Ga0495668_0000003 Ga0495668_0000003_303498_304199 230
308 3300046660 Ga0495625_0000669 Ga0495625_0000669_15934_16635 230
309 3300046660 Ga0495625_0003408 Ga0495625_0003408_12432_13133 230
310 3300046660 Ga0495625_0163193 Ga0495625_0163193_301_1014 230
311 3300047472 Ga0495686_0073669 Ga0495686_0073669_498_1196 230
312 3300049571 Ga0501034_0103464 Ga0501034_0103464_2133_2828 230
313 3300049581 Ga0501047_0204611 Ga0501047_0204611_970_1680 230
314 3300049586 Ga0501070_0024601 Ga0501070_0024601_670_1404 230
315 3300049586 Ga0501070_0160889 Ga0501070_0160889_249_944 230
316 3300049587 Ga0501071_0458604 Ga0501071_0458604_104_814 230
317 3300049589 Ga0501073_0041045 Ga0501073_0041045_2235_2945 230
318 3300049590 Ga0501074_0161383 Ga0501074_0161383_859_1569 230
319 3300049744 Ga0501083_0043241 Ga0501083_0043241_1187_1897 230
320 3300049758 Ga0501241_020497 Ga0501241_020497_448_1140 230
321 3300049823 Ga0501044_0075523 Ga0501044_0075523_1059_1754 230
322 3300050493 nmdc:mga0k408_14835_c1 nmdc:mga0k408_14835_c1_1747_2439 230
323 3300050493 nmdc:mga0k408_16_c2 nmdc:mga0k408_16_c2_55642_56343 230
324 3300053089 Ga0500581_061199 Ga0500581_061199_1051_1773 230
325 3300053090 Ga0500646_0030026 Ga0500646_0030026_507_1214 230
326 3300053092 Ga0500583_0032544 Ga0500583_0032544_878_1585 230
327 3300053093 Ga0500651_0000202 Ga0500651_0000202_20329_21021 230
328 3300053109 Ga0500569_005263 Ga0500569_005263_1914_2621 230
329 3300053134 Ga0500658_0001493 Ga0500658_0001493_3376_4083 230
330 3300053136 Ga0500559_0033532 Ga0500559_0033532_847_1560 230
331 3300053142 Ga0500577_0079747 Ga0500577_0079747_434_1141 230
332 3300053153 Ga0500616_0011853 Ga0500616_0011853_2708_3415 230
333 3300053153 Ga0500616_0144079 Ga0500616_0144079_211_909 230
334 3300053160 Ga0500633_0058460 Ga0500633_0058460_26_733 230
335 3300054114 Ga0501084_0164316 Ga0501084_0164316_761_1471 230
336 iso_pu_bacteria 2929239360 2929241785 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

99

281

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h0j-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9846 1 228
5h0k-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9843 1 228
5h0j-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9719 1 228
5h0k-assembly1.cif.gz_A the crystal structure of wt pedobacter heparinus smug2 0.9717 1 228
1oe6-assembly1.cif.gz_A xenopus smug1, an anti-mutator uracil-dna glycosylase 0.7389 4 205
ID Description Score Start End Superfamily
5h98A00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7525 4 205 3.40.470.10
1oe5B00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7481 3 227 3.40.470.10
1oe5B00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7307 3 227 3.40.470.10
af_Q9VEM1_36_278_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.7038 4 227 3.40.470.10
af_Q9VEM1_36_278_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.6848 4 227 3.40.470.10
ID Description Score Start End GO Terms
AF-A0A0S7BNH8-F1-model_v4 Uracil-DNA glycosylase-like domain-containing protein 0.996 2 227
AF-A0A7U9XKH4-F1-model_v4 DUF4918 domain-containing protein 0.9959 122 227
AF-A0A3B9ZUH5-F1-model_v4 DUF4918 domain-containing protein 0.9947 62 230
AF-A0A6C1QFC1-F1-model_v4 SMUG2 DNA glycosylase family protein 0.994 1 226
AF-A0A7C1RV57-F1-model_v4 SMUG2 DNA glycosylase family protein 0.9933 3 226

Feature Viewer

pLDDT pTM Quality
95.48 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map