F412477

General Info

Members Datasets Scaffolds Average Seq Length
335 234 670 293

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2858868258|2858873032
Length 317
Sequence VETEQEPPMAGTAQTAPDERGRHDRPDPATEAFLAHRNLLFTVAYEMLGSAADAEDVLQETWLRWVRVDLDTVREQRAYLVRITTRQALARLRTLGRRKESYVGPWLPEPLLTAPDVAEDVELADSVSMAMLLVLETLTPTERAVFVLREVFELPYDEIAEAVDKSEAAVRQIAHRARGHVAARRPRGVTSAAETRDALEAFRKATETGDLQGLLDILAPDVVFLGDGGGVRQAVPRPVVGADKVGRLLAAGLGRIAALMSLRPAEVNGYPALILQQGDEVDTVLAVRIDDGLVTGLYAVRNPEKLSHMEREITLSR

Samples

Sample ID Description Type Environment
1 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
80 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
81 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
89 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
90 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
91 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
100 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
101 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
102 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
109 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
110 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
118 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
124 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
132 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
133 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
136 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
137 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
138 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
139 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
140 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
141 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
142 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
150 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
151 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
157 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
164 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
167 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
182 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
183 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
184 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
185 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
186 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
187 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
188 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
191 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
192 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
193 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
194 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
195 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
196 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
197 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
198 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
199 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
200 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
201 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
202 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 2858868258 Micromonospora sp. MH33 Isolate Unclassified
205 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
206 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
207 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
208 2643221576 Nocardioides sp. Root614 Isolate Unclassified
209 2643221590 Nocardioides sp. Root682 Isolate Unclassified
210 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
211 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
212 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
213 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
214 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
215 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
216 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
217 2808606448 Streptomyces sp. 193411 Isolate Unclassified
218 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
219 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
220 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
221 2855683550 Micromonospora sp. RP3T Isolate Unclassified
222 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
223 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
224 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
225 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
226 2902582711 Micromonospora sp. AP08 Isolate Unclassified
227 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
228 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
229 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
230 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
231 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
232 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
233 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
234 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.85
Metatranscriptomes 0.3
Isolates 9.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.87
Nodule 0
Rhizoplane 3.88
Rhizosphere 75.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1001472 3300002773 Bacteria 10069
2 Ga0070680_100176143 3300005336 Bacteria 1800
3 Ga0070669_100000663 3300005353 Bacteria 25361
4 Ga0070667_100001799 3300005367 Bacteria 19080
5 Ga0070709_10227654 3300005434 Bacteria 1332
6 Ga0070714_100002313 3300005435 Bacteria 14024
7 Ga0070714_100263923 3300005435 Bacteria 1595
8 Ga0070713_100184328 3300005436 Bacteria 1877
9 Ga0070713_100384684 3300005436 Bacteria 1308
10 Ga0070710_10024505 3300005437 Bacteria 3184
11 Ga0070711_100020850 3300005439 Bacteria 4230
12 Ga0070708_100104078 3300005445 Bacteria 2603
13 Ga0070663_100188752 3300005455 Bacteria 1603
14 Ga0070707_100043872 3300005468 Bacteria 4280
15 Ga0070707_100235641 3300005468 Bacteria 1781
16 Ga0070698_100002013 3300005471 Bacteria 22580
17 Ga0070698_100064002 3300005471 Bacteria 3706
18 Ga0070698_100184389 3300005471 Bacteria 2025
19 Ga0070684_100113872 3300005535 Bacteria 2427
20 Ga0070665_100022253 3300005548 Bacteria 6377
21 Ga0070665_100514843 3300005548 Bacteria 1208
22 Ga0068855_100000171 3300005563 Bacteria 82971
23 Ga0068855_100094126 3300005563 Bacteria 3455
24 Ga0068854_100220030 3300005578 Bacteria 1502
25 Ga0068856_100108450 3300005614 Bacteria 2773
26 Ga0068852_100003261 3300005616 Bacteria 11332
27 Ga0068859_100002472 3300005617 Bacteria 18794
28 Ga0068863_100001815 3300005841 Bacteria 21207
29 Ga0068860_100000140 3300005843 Bacteria 118729
30 Ga0068862_100000034 3300005844 Bacteria 176511
31 Ga0081455_10001225 3300005937 Bacteria 32099
32 Ga0081455_10044446 3300005937 Bacteria 3874
33 Ga0081538_10024013 3300005981 Bacteria 4358
34 Ga0081539_10003148 3300005985 Bacteria 20948
35 Ga0081539_10010318 3300005985 Bacteria 7610
36 Ga0070717_10020046 3300006028 Bacteria 5254
37 Ga0070717_10093551 3300006028 Bacteria 2541
38 Ga0070717_10113739 3300006028 Bacteria 2311
39 Ga0075365_10162558 3300006038 Bacteria 1556
40 Ga0075368_10013427 3300006042 Bacteria 3008
41 Ga0075363_100011286 3300006048 Bacteria 4274
42 Ga0075364_10051420 3300006051 Bacteria 2691
43 Ga0075364_10056026 3300006051 Bacteria 2580
44 Ga0070715_10007555 3300006163 Bacteria 3747
45 Ga0070712_100014440 3300006175 Bacteria 5069
46 Ga0075367_10004333 3300006178 Bacteria 6908
47 Ga0075367_10025538 3300006178 Bacteria 3342
48 Ga0075369_10010371 3300006186 Bacteria 3644
49 Ga0075370_10000928 3300006353 Bacteria 12046
50 Ga0075370_10011978 3300006353 Bacteria 4570
51 Ga0075370_10046061 3300006353 Bacteria 2467
52 Ga0097620_100002472 3300006931 Bacteria 18794
53 Ga0105240_10144608 3300009093 Bacteria 2839
54 Ga0105247_10000172 3300009101 Bacteria 63966
55 Ga0114129_10705503 3300009147 Bacteria 1296
56 Ga0105241_10006859 3300009174 Bacteria 8377
57 Ga0105248_10000067 3300009177 Bacteria 121245
58 Ga0105249_10000051 3300009553 Bacteria 169445
59 Ga0105239_10481777 3300010375 Bacteria 1409
60 Ga0157375_10594977 3300013308 Bacteria 1266
61 Ga0163163_10010426 3300014325 Bacteria 8359
62 Ga0206354_11271102 3300020081 Bacteria 1790
63 Ga0207426_1027632 3300025302 Bacteria 1888
64 Ga0207692_10134851 3300025898 Bacteria 1398
65 Ga0207710_10000133 3300025900 Bacteria 87338
66 Ga0207699_10149869 3300025906 Bacteria 1542
67 Ga0207707_10292905 3300025912 Bacteria 1408
68 Ga0207695_10002687 3300025913 Bacteria 25954
69 Ga0207671_10000719 3300025914 Bacteria 42231
70 Ga0207693_10008499 3300025915 Bacteria 8404
71 Ga0207693_10015109 3300025915 Bacteria 6197
72 Ga0207693_10020201 3300025915 Bacteria 5298
73 Ga0207660_10044749 3300025917 Bacteria 3115
74 Ga0207646_10126682 3300025922 Bacteria 2296
75 Ga0207646_10197756 3300025922 Bacteria 1815
76 Ga0207681_10000493 3300025923 Bacteria 27598
77 Ga0207694_10001752 3300025924 Bacteria 18202
78 Ga0207700_10001438 3300025928 Bacteria 13512
79 Ga0207700_10054857 3300025928 Bacteria 2993
80 Ga0207700_10064446 3300025928 Bacteria 2791
81 Ga0207664_10056978 3300025929 Bacteria 3105
82 Ga0207664_10122164 3300025929 Bacteria 2181
83 Ga0207709_10249455 3300025935 Bacteria 1296
84 Ga0207711_10000091 3300025941 Bacteria 96789
85 Ga0207667_10182247 3300025949 Bacteria 2156
86 Ga0207712_10000043 3300025961 Bacteria 173580
87 Ga0207640_10169107 3300025981 Bacteria 1627
88 Ga0207658_10001353 3300025986 Bacteria 19174
89 Ga0207703_10040478 3300026035 Bacteria 3730
90 Ga0207678_10098324 3300026067 Bacteria 2500
91 Ga0207702_10032566 3300026078 Bacteria 4350
92 Ga0207702_10115088 3300026078 Bacteria 2398
93 Ga0207641_10003256 3300026088 Bacteria 14475
94 Ga0207683_10031256 3300026121 Bacteria 4621
95 Ga0268266_10015530 3300028379 Bacteria 6531
96 Ga0268266_10016183 3300028379 Bacteria 6378
97 Ga0268266_10479159 3300028379 Bacteria 1186
98 Ga0268265_10000027 3300028380 Bacteria 240507
99 Ga0268264_10000127 3300028381 Bacteria 185112
100 Ga0307515_10000167 3300028794 Bacteria 160820
101 Ga0307515_10007036 3300028794 Bacteria 22346
102 Ga0307515_10056548 3300028794 Bacteria 5699
103 Ga0307512_10007865 3300030522 Bacteria 10483
104 Ga0307513_10024563 3300031456 Bacteria 7010
105 Ga0307513_10042315 3300031456 Bacteria 5017
106 Ga0307513_10082958 3300031456 Bacteria 3298
107 Ga0307513_10242451 3300031456 Bacteria 1606
108 Ga0307509_10265443 3300031507 Bacteria 1488
109 Ga0307508_10008187 3300031616 Bacteria 9692
110 Ga0307516_10009595 3300031730 Bacteria 10775
111 Ga0307410_10261860 3300031852 Bacteria 1349
112 Ga0307406_10000602 3300031901 Bacteria 20583
113 Ga0307409_100341978 3300031995 Bacteria 1408
114 Ga0307416_100555437 3300032002 Bacteria 1222
115 Ga0307411_10152321 3300032005 Bacteria 1720
116 Ga0307415_100011054 3300032126 Bacteria 5145
117 Ga0307415_100026973 3300032126 Bacteria 3632
118 Ga0307507_10000625 3300033179 Bacteria 76347
119 Ga0307507_10020812 3300033179 Bacteria 7327
120 Ga0307507_10095787 3300033179 Bacteria 2514
121 Ga0307510_10102589 3300033180 Bacteria 2642
122 Ga0373934_0001933 3300035086 Bacteria 7599
123 Ga0373923_0028173 3300035111 Bacteria 2245
124 Ga0373953_0018142 3300035117 Bacteria 2599
125 Ga0373955_0053709 3300035172 Bacteria 2200
126 Ga0373933_0010698 3300035724 Bacteria 5032
127 Ga0373933_0080163 3300035724 Bacteria 2000
128 Ga0373937_0264453 3300036401 Bacteria 1622
129 Ga0373925_0000092 3300037068 Bacteria 95847
130 Ga0373925_0080753 3300037068 Bacteria 2472
131 Ga0395900_0020051 3300037418 Bacteria 6819
132 Ga0395898_0025197 3300037466 Bacteria 5997
133 Ga0436363_0790820 3300039450 Bacteria 942
134 Ga0451853_0147001 3300041512 Bacteria 1220
135 Ga0451853_0453289 3300041512 Bacteria 11245
136 Ga0439449_0006330 3300042007 Bacteria 4523
137 Ga0450920_002922 3300042122 Bacteria 2940
138 Ga0466969_0043060 3300044656 Bacteria 2250
139 Ga0466969_0115301 3300044656 Bacteria 1254
140 Ga0466972_0019485 3300044658 Bacteria 3391
141 Ga0466972_0107845 3300044658 Bacteria 1316
142 Ga0466965_0032089 3300044683 Bacteria 2565
143 Ga0466965_0041656 3300044683 Bacteria 2263
144 Ga0466961_0000164 3300044693 Bacteria 45069
145 Ga0466961_0040587 3300044693 Bacteria 2984
146 Ga0466961_0109865 3300044693 Bacteria 1735
147 Ga0466961_0248564 3300044693 Bacteria 1092
148 Ga0466963_0001148 3300044694 Bacteria 13864
149 Ga0466963_0007177 3300044694 Bacteria 6643
150 Ga0466963_0216613 3300044694 Bacteria 1340
151 Ga0466964_0036388 3300044706 Bacteria 1973
152 Ga0466971_0000051 3300044719 Bacteria 47315
153 Ga0466971_0041276 3300044719 Bacteria 2072
154 Ga0466968_0146985 3300044735 Bacteria 1081
155 Ga0466957_0007216 3300044842 Bacteria 6281
156 Ga0466957_0022874 3300044842 Bacteria 3690
157 Ga0466960_0049547 3300044901 Bacteria 2022
158 Ga0466960_0167778 3300044901 Bacteria 1183
159 Ga0466959_0005624 3300045049 Bacteria 8621
160 Ga0466959_0159774 3300045049 Bacteria 1585
161 Ga0466959_0191751 3300045049 Bacteria 1426
162 Ga0466958_0001044 3300045836 Bacteria 12673
163 Ga0466958_0005548 3300045836 Bacteria 6802
164 Ga0466958_0008948 3300045836 Bacteria 5563
165 Ga0466958_0082663 3300045836 Bacteria 1978
166 Ga0466967_0004268 3300045976 Bacteria 9604
167 Ga0466967_0011900 3300045976 Bacteria 6625
168 Ga0466967_0016551 3300045976 Bacteria 5820
169 Ga0466967_0022050 3300045976 Bacteria 5188
170 Ga0466967_0079277 3300045976 Bacteria 2960
171 Ga0466967_0113165 3300045976 Bacteria 2496
172 Ga0466967_0655303 3300045976 Bacteria 1038
173 Ga0495592_0070309 3300046454 Bacteria 2550
174 Ga0495603_0004892 3300046455 Bacteria 8012
175 Ga0495603_0108566 3300046455 Bacteria 1619
176 Ga0495629_0343919 3300046459 Bacteria 1018
177 Ga0495651_0004574 3300046462 Bacteria 10581
178 Ga0495651_0015299 3300046462 Bacteria 5931
179 Ga0495651_0032535 3300046462 Bacteria 4067
180 Ga0495651_0298881 3300046462 Bacteria 1081
181 Ga0495651_0311153 3300046462 Bacteria 1053
182 Ga0495653_0037501 3300046463 Bacteria 3807
183 Ga0495650_0049208 3300046471 Bacteria 1752
184 Ga0495664_0063288 3300046477 Bacteria 2204
185 Ga0495585_0014490 3300046492 Bacteria 4592
186 Ga0495594_0122370 3300046499 Bacteria 1471
187 Ga0495618_0055053 3300046514 Bacteria 2518
188 Ga0495618_0093331 3300046514 Bacteria 1924
189 Ga0495628_0020783 3300046516 Bacteria 5409
190 Ga0495628_0064822 3300046516 Bacteria 2859
191 Ga0495648_0020677 3300046524 Bacteria 4582
192 Ga0495652_0003408 3300046529 Bacteria 15718
193 Ga0495652_0063729 3300046529 Bacteria 3102
194 Ga0495640_0122762 3300046533 Bacteria 1687
195 Ga0495645_0146310 3300046543 Bacteria 1645
196 Ga0495667_0016546 3300046559 Bacteria 4981
197 Ga0495667_0057218 3300046559 Bacteria 2563
198 Ga0495634_0038947 3300046642 Bacteria 3239
199 Ga0495611_0017484 3300046648 Bacteria 3068
200 Ga0495635_0057800 3300046663 Bacteria 2668
201 Ga0495635_0275680 3300046663 Bacteria 1130
202 Ga0495588_0094565 3300046674 Bacteria 1567
203 Ga0495657_0012265 3300046675 Bacteria 6368
204 Ga0495657_0040669 3300046675 Bacteria 3187
205 Ga0495599_0094808 3300046678 Bacteria 1861
206 Ga0495623_0152982 3300046679 Bacteria 1362
207 Ga0495646_0047566 3300046680 Bacteria 2610
208 Ga0495589_0004119 3300046794 Bacteria 7779
209 Ga0495600_0011303 3300046809 Bacteria 5561
210 Ga0495600_0019087 3300046809 Bacteria 4375
211 Ga0495600_0162313 3300046809 Bacteria 1444
212 Ga0495604_0006614 3300047317 Bacteria 9186
213 Ga0495674_0134391 3300047319 Bacteria 2082
214 Ga0495674_0227940 3300047319 Bacteria 1538
215 Ga0495676_0009053 3300047321 Bacteria 9082
216 Ga0495676_0028667 3300047321 Bacteria 4750
217 Ga0495680_0069445 3300047322 Bacteria 2688
218 Ga0495680_0080464 3300047322 Bacteria 2462
219 Ga0495675_0218582 3300047444 Bacteria 1154
220 Ga0495684_0040484 3300047471 Bacteria 3572
221 Ga0495684_0044583 3300047471 Bacteria 3395
222 Ga0495684_0122520 3300047471 Bacteria 1957
223 Ga0495686_0089102 3300047472 Bacteria 1875
224 Ga0495602_0006389 3300048088 Bacteria 12364
225 Ga0495602_0097152 3300048088 Bacteria 2427
226 Ga0496100_0061871 3300048903 Bacteria 2468
227 Ga0496101_0148137 3300048904 Bacteria 1793
228 Ga0496102_0001061 3300048905 Bacteria 25475
229 Ga0496106_0520331 3300048909 Bacteria 955
230 Ga0496108_0031212 3300048911 Bacteria 4419
231 Ga0496108_0227041 3300048911 Bacteria 1623
232 Ga0496109_0021543 3300048912 Bacteria 5701
233 Ga0496109_0204353 3300048912 Bacteria 1857
234 Ga0496110_0491907 3300048913 Bacteria 1117
235 Ga0496111_0338509 3300048914 Bacteria 1114
236 Ga0496114_0074430 3300048917 Bacteria 2859
237 Ga0496114_0149224 3300048917 Bacteria 2028
238 Ga0496115_0007299 3300048918 Bacteria 8129
239 Ga0496116_0020036 3300048919 Bacteria 5095
240 Ga0496117_0005107 3300048920 Bacteria 14025
241 Ga0496118_0005191 3300048921 Bacteria 14907
242 Ga0496119_0017444 3300048922 Bacteria 5396
243 Ga0496120_0013445 3300048923 Bacteria 5508
244 Ga0496121_0027394 3300048924 Bacteria 5333
245 Ga0496125_0105530 3300048928 Bacteria 2059
246 Ga0501031_0003933 3300049568 Bacteria 9567
247 Ga0501032_0003562 3300049569 Bacteria 11868
248 Ga0501032_0013660 3300049569 Bacteria 5768
249 Ga0501032_0106868 3300049569 Bacteria 1853
250 Ga0501033_0012611 3300049570 Bacteria 6450
251 Ga0501033_0088294 3300049570 Bacteria 2268
252 Ga0501034_0007207 3300049571 Bacteria 11869
253 Ga0501034_0010864 3300049571 Bacteria 9458
254 Ga0501034_0020124 3300049571 Bacteria 6813
255 Ga0501036_0007448 3300049572 Bacteria 8917
256 Ga0501036_0067748 3300049572 Bacteria 3020
257 Ga0501036_0263954 3300049572 Bacteria 1442
258 Ga0501037_0003219 3300049573 Bacteria 11839
259 Ga0501037_0127864 3300049573 Bacteria 1823
260 Ga0501038_0005776 3300049574 Bacteria 11459
261 Ga0501038_0038542 3300049574 Bacteria 4184
262 Ga0501041_0002377 3300049577 Bacteria 10642
263 Ga0501042_0003879 3300049578 Bacteria 9452
264 Ga0501043_0003589 3300049579 Bacteria 12740
265 Ga0501043_0035237 3300049579 Bacteria 3936
266 Ga0501046_0004862 3300049580 Bacteria 12107
267 Ga0501047_0007928 3300049581 Bacteria 10011
268 Ga0501047_0017496 3300049581 Bacteria 6865
269 Ga0501047_0048009 3300049581 Bacteria 4124
270 Ga0501048_0006492 3300049582 Bacteria 8888
271 Ga0501067_0002410 3300049583 Bacteria 10336
272 Ga0501067_0092800 3300049583 Bacteria 1676
273 Ga0501069_0001723 3300049585 Bacteria 10898
274 Ga0501070_0041424 3300049586 Bacteria 3837
275 Ga0501071_0005715 3300049587 Bacteria 8022
276 Ga0501072_0519549 3300049588 Bacteria 941
277 Ga0501073_0005780 3300049589 Bacteria 9246
278 Ga0501080_0026979 3300049742 Bacteria 5340
279 Ga0501083_0007311 3300049744 Bacteria 7828
280 Ga0501035_0000169 3300049822 Bacteria 80050
281 Ga0501035_0005956 3300049822 Bacteria 11480
282 Ga0501044_0000257 3300049823 Bacteria 67206
283 Ga0501044_0007710 3300049823 Bacteria 11839
284 Ga0501044_0046678 3300049823 Bacteria 4483
285 Ga0501044_0280722 3300049823 Bacteria 1599
286 Ga0501045_0012935 3300049824 Bacteria 5882
287 nmdc:mga03n38_21682_c1 3300050490 Bacteria 2589
288 nmdc:mga00v17_40338_c1 3300050491 Bacteria 2800
289 nmdc:mga00v17_63183_c1 3300050491 Bacteria 2280
290 nmdc:mga06z11_135129_c1 3300050494 Bacteria 1389
291 nmdc:mga04h51_53751_c1 3300050495 Bacteria 1360
292 nmdc:mga07m45_10431_c1 3300050496 Bacteria 4853
293 nmdc:mga07m45_54223_c1 3300050496 Bacteria 2266
294 nmdc:mga0sz30_5974_c1 3300050516 Bacteria 4492
295 Ga0495619_0031149 3300053085 Bacteria 3455
296 Ga0500646_0000125 3300053090 Bacteria 21752
297 Ga0500568_0022390 3300053139 Bacteria 2703
298 Ga0501084_0148731 3300054114 Bacteria 1973
299 Ga0501082_0012250 3300060353 Bacteria 7370
300 Ga0466962_0009263 3300061719 Bacteria 4717
301 Ga0530510_0053535 3300061734 Bacteria 2917
302 Ga0530510_0221421 3300061734 Bacteria 1407
303 2858873032 2858868258 Bacteria 7683772
304 2554258465 2554235005 Bacteria 6457341
305 2586062812 2585427649 Bacteria 9053857
306 2623585596 2622736626 Bacteria 7181580
307 2623586296 2622736626 Bacteria 7181580
308 2643889195 2643221576 Bacteria 5214352
309 2643958250 2643221590 Bacteria 5214697
310 2644505965 2643221690 Bacteria 4654705
311 2644524647 2643221694 Bacteria 4392972
312 2644668733 2643221722 Bacteria 4247614
313 2676475017 2675903058 Bacteria 6822861
314 2676492465 2675903060 Bacteria 10051191
315 2753324201 2751185792 Bacteria 5739090
316 2784587989 2784132148 Bacteria 8627943
317 2809231595 2808606448 Bacteria 8656184
318 2827630814 2827628540 Bacteria 6858585
319 2831936708 2831935698 Bacteria 5963223
320 2839989161 2839986021 Bacteria 3685650
321 2855685482 2855683550 Bacteria 7134265
322 2862185939 2862178590 Bacteria 8583590
323 2862283936 2862281513 Bacteria 9621493
324 2868095025 2868088558 Bacteria 7609351
325 2891398523 2891395885 Bacteria 9251614
326 2891398601 2891395885 Bacteria 9251614
327 2902584938 2902582711 Bacteria 6187705
328 2919469612 2919468124 Bacteria 9133025
329 2929221647 2929219909 Bacteria 6984360
330 2946044316 2946041624 Bacteria 4191385
331 2990049211 2990044586 Bacteria 6603797
332 3003007332 3002998708 Bacteria 11715108
333 8023631001 8023623736 Bacteria 8593882
334 8047711060 8047710418 Bacteria 11023148
335 8054475671 8054472261 Bacteria 7464355
336 JGI25152J39213_1001472
337 Ga0070680_100176143
338 Ga0070669_100000663
339 Ga0070667_100001799
340 Ga0070709_10227654
341 Ga0070714_100002313
342 Ga0070714_100263923
343 Ga0070713_100184328
344 Ga0070713_100384684
345 Ga0070710_10024505
346 Ga0070711_100020850
347 Ga0070708_100104078
348 Ga0070663_100188752
349 Ga0070707_100043872
350 Ga0070707_100235641
351 Ga0070698_100002013
352 Ga0070698_100064002
353 Ga0070698_100184389
354 Ga0070684_100113872
355 Ga0070665_100022253
356 Ga0070665_100514843
357 Ga0068855_100000171
358 Ga0068855_100094126
359 Ga0068854_100220030
360 Ga0068856_100108450
361 Ga0068852_100003261
362 Ga0068859_100002472
363 Ga0068863_100001815
364 Ga0068860_100000140
365 Ga0068862_100000034
366 Ga0081455_10001225
367 Ga0081455_10044446
368 Ga0081538_10024013
369 Ga0081539_10003148
370 Ga0081539_10010318
371 Ga0070717_10020046
372 Ga0070717_10093551
373 Ga0070717_10113739
374 Ga0075365_10162558
375 Ga0075368_10013427
376 Ga0075363_100011286
377 Ga0075364_10051420
378 Ga0075364_10056026
379 Ga0070715_10007555
380 Ga0070712_100014440
381 Ga0075367_10004333
382 Ga0075367_10025538
383 Ga0075369_10010371
384 Ga0075370_10000928
385 Ga0075370_10011978
386 Ga0075370_10046061
387 Ga0097620_100002472
388 Ga0105240_10144608
389 Ga0105247_10000172
390 Ga0114129_10705503
391 Ga0105241_10006859
392 Ga0105248_10000067
393 Ga0105249_10000051
394 Ga0105239_10481777
395 Ga0157375_10594977
396 Ga0163163_10010426
397 Ga0206354_11271102
398 Ga0207426_1027632
399 Ga0207692_10134851
400 Ga0207710_10000133
401 Ga0207699_10149869
402 Ga0207707_10292905
403 Ga0207695_10002687
404 Ga0207671_10000719
405 Ga0207693_10008499
406 Ga0207693_10015109
407 Ga0207693_10020201
408 Ga0207660_10044749
409 Ga0207646_10126682
410 Ga0207646_10197756
411 Ga0207681_10000493
412 Ga0207694_10001752
413 Ga0207700_10001438
414 Ga0207700_10054857
415 Ga0207700_10064446
416 Ga0207664_10056978
417 Ga0207664_10122164
418 Ga0207709_10249455
419 Ga0207711_10000091
420 Ga0207667_10182247
421 Ga0207712_10000043
422 Ga0207640_10169107
423 Ga0207658_10001353
424 Ga0207703_10040478
425 Ga0207678_10098324
426 Ga0207702_10032566
427 Ga0207702_10115088
428 Ga0207641_10003256
429 Ga0207683_10031256
430 Ga0268266_10015530
431 Ga0268266_10016183
432 Ga0268266_10479159
433 Ga0268265_10000027
434 Ga0268264_10000127
435 Ga0307515_10000167
436 Ga0307515_10007036
437 Ga0307515_10056548
438 Ga0307512_10007865
439 Ga0307513_10024563
440 Ga0307513_10042315
441 Ga0307513_10082958
442 Ga0307513_10242451
443 Ga0307509_10265443
444 Ga0307508_10008187
445 Ga0307516_10009595
446 Ga0307410_10261860
447 Ga0307406_10000602
448 Ga0307409_100341978
449 Ga0307416_100555437
450 Ga0307411_10152321
451 Ga0307415_100011054
452 Ga0307415_100026973
453 Ga0307507_10000625
454 Ga0307507_10020812
455 Ga0307507_10095787
456 Ga0307510_10102589
457 Ga0373934_0001933
458 Ga0373923_0028173
459 Ga0373953_0018142
460 Ga0373955_0053709
461 Ga0373933_0010698
462 Ga0373933_0080163
463 Ga0373937_0264453
464 Ga0373925_0000092
465 Ga0373925_0080753
466 Ga0395900_0020051
467 Ga0395898_0025197
468 Ga0436363_0790820
469 Ga0451853_0147001
470 Ga0451853_0453289
471 Ga0439449_0006330
472 Ga0450920_002922
473 Ga0466969_0043060
474 Ga0466969_0115301
475 Ga0466972_0019485
476 Ga0466972_0107845
477 Ga0466965_0032089
478 Ga0466965_0041656
479 Ga0466961_0000164
480 Ga0466961_0040587
481 Ga0466961_0109865
482 Ga0466961_0248564
483 Ga0466963_0001148
484 Ga0466963_0007177
485 Ga0466963_0216613
486 Ga0466964_0036388
487 Ga0466971_0000051
488 Ga0466971_0041276
489 Ga0466968_0146985
490 Ga0466957_0007216
491 Ga0466957_0022874
492 Ga0466960_0049547
493 Ga0466960_0167778
494 Ga0466959_0005624
495 Ga0466959_0159774
496 Ga0466959_0191751
497 Ga0466958_0001044
498 Ga0466958_0005548
499 Ga0466958_0008948
500 Ga0466958_0082663
501 Ga0466967_0004268
502 Ga0466967_0011900
503 Ga0466967_0016551
504 Ga0466967_0022050
505 Ga0466967_0079277
506 Ga0466967_0113165
507 Ga0466967_0655303
508 Ga0495592_0070309
509 Ga0495603_0004892
510 Ga0495603_0108566
511 Ga0495629_0343919
512 Ga0495651_0004574
513 Ga0495651_0015299
514 Ga0495651_0032535
515 Ga0495651_0298881
516 Ga0495651_0311153
517 Ga0495653_0037501
518 Ga0495650_0049208
519 Ga0495664_0063288
520 Ga0495585_0014490
521 Ga0495594_0122370
522 Ga0495618_0055053
523 Ga0495618_0093331
524 Ga0495628_0020783
525 Ga0495628_0064822
526 Ga0495648_0020677
527 Ga0495652_0003408
528 Ga0495652_0063729
529 Ga0495640_0122762
530 Ga0495645_0146310
531 Ga0495667_0016546
532 Ga0495667_0057218
533 Ga0495634_0038947
534 Ga0495611_0017484
535 Ga0495635_0057800
536 Ga0495635_0275680
537 Ga0495588_0094565
538 Ga0495657_0012265
539 Ga0495657_0040669
540 Ga0495599_0094808
541 Ga0495623_0152982
542 Ga0495646_0047566
543 Ga0495589_0004119
544 Ga0495600_0011303
545 Ga0495600_0019087
546 Ga0495600_0162313
547 Ga0495604_0006614
548 Ga0495674_0134391
549 Ga0495674_0227940
550 Ga0495676_0009053
551 Ga0495676_0028667
552 Ga0495680_0069445
553 Ga0495680_0080464
554 Ga0495675_0218582
555 Ga0495684_0040484
556 Ga0495684_0044583
557 Ga0495684_0122520
558 Ga0495686_0089102
559 Ga0495602_0006389
560 Ga0495602_0097152
561 Ga0496100_0061871
562 Ga0496101_0148137
563 Ga0496102_0001061
564 Ga0496106_0520331
565 Ga0496108_0031212
566 Ga0496108_0227041
567 Ga0496109_0021543
568 Ga0496109_0204353
569 Ga0496110_0491907
570 Ga0496111_0338509
571 Ga0496114_0074430
572 Ga0496114_0149224
573 Ga0496115_0007299
574 Ga0496116_0020036
575 Ga0496117_0005107
576 Ga0496118_0005191
577 Ga0496119_0017444
578 Ga0496120_0013445
579 Ga0496121_0027394
580 Ga0496125_0105530
581 Ga0501031_0003933
582 Ga0501032_0003562
583 Ga0501032_0013660
584 Ga0501032_0106868
585 Ga0501033_0012611
586 Ga0501033_0088294
587 Ga0501034_0007207
588 Ga0501034_0010864
589 Ga0501034_0020124
590 Ga0501036_0007448
591 Ga0501036_0067748
592 Ga0501036_0263954
593 Ga0501037_0003219
594 Ga0501037_0127864
595 Ga0501038_0005776
596 Ga0501038_0038542
597 Ga0501041_0002377
598 Ga0501042_0003879
599 Ga0501043_0003589
600 Ga0501043_0035237
601 Ga0501046_0004862
602 Ga0501047_0007928
603 Ga0501047_0017496
604 Ga0501047_0048009
605 Ga0501048_0006492
606 Ga0501067_0002410
607 Ga0501067_0092800
608 Ga0501069_0001723
609 Ga0501070_0041424
610 Ga0501071_0005715
611 Ga0501072_0519549
612 Ga0501073_0005780
613 Ga0501080_0026979
614 Ga0501083_0007311
615 Ga0501035_0000169
616 Ga0501035_0005956
617 Ga0501044_0000257
618 Ga0501044_0007710
619 Ga0501044_0046678
620 Ga0501044_0280722
621 Ga0501045_0012935
622 nmdc:mga03n38_21682_c1
623 nmdc:mga00v17_40338_c1
624 nmdc:mga00v17_63183_c1
625 nmdc:mga06z11_135129_c1
626 nmdc:mga04h51_53751_c1
627 nmdc:mga07m45_10431_c1
628 nmdc:mga07m45_54223_c1
629 nmdc:mga0sz30_5974_c1
630 Ga0495619_0031149
631 Ga0500646_0000125
632 Ga0500568_0022390
633 Ga0501084_0148731
634 Ga0501082_0012250
635 Ga0466962_0009263
636 Ga0530510_0053535
637 Ga0530510_0221421
638 2858873032
639 2554258465
640 2586062812
641 2623585596
642 2623586296
643 2643889195
644 2643958250
645 2644505965
646 2644524647
647 2644668733
648 2676475017
649 2676492465
650 2753324201
651 2784587989
652 2809231595
653 2827630814
654 2831936708
655 2839989161
656 2855685482
657 2862185939
658 2862283936
659 2868095025
660 2891398523
661 2891398601
662 2902584938
663 2919469612
664 2929221647
665 2946044316
666 2990049211
667 3003007332
668 8023631001
669 8047711060
670 8054475671

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04545

Sigma70_r4

Sigma-70, region 4

134

182

0.95

PF08281

Sigma70_r4_2

Sigma-70, region 4

128

181

0.94

PF04542

Sigma70_r2

Sigma-70 region 2

32

98

0.91

Map