F412303

General Info

Members Datasets Scaffolds Average Seq Length
335 182 670 278

Family's Representative Sequence

Representative Sequence 3300031852|Ga0307410_10184769|Ga0307410_101847692
Length 281
Sequence MVRGAAAAPELPPLREVIARHGLAASKALGQNFLLDEQLLARIAAIPGDIRGASVFEVGPGPGGLTRAALRAGARVVAVERDRRCIPALEELSDRFPEQLTIVEGDAMAVDARSLAGEGAHIVANLPYNVGTALLIGWLSAEWMPWWRSLTLMFQQEVAERIVAPPGSAHYGRLAVLAQWRSIPRIAMKVHRSAFTPPPKIMSAVVHIVPAQEPEGVRLAVLERVTAAAFGQRRKMLRQSLRSVPGALDTLERLGIDAQRRAETLSVPEYVAIARILSEEG

Samples

Sample ID Description Type Environment
1 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
2 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
5 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
6 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
7 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
8 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
9 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
10 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
70 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
71 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
113 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
114 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
115 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
116 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
117 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
132 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
133 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
134 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
135 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
136 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
137 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
138 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
139 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
147 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
151 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
152 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
153 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
154 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
155 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
156 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
157 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
158 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
159 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
160 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
161 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
162 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
163 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
164 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
165 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
166 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
167 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
172 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
173 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
174 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
178 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
179 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
180 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
181 2885427238 Sphingomonas mesophila SYSUP0001 Isolate Stem Tuber
182 2896429255 Sphingomonas rhizophila KACC 19189 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.1
Metatranscriptomes 0
Isolates 0.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.28
Nodule 0
Rhizoplane 1.49
Rhizosphere 87.76
Stem 0
Stem Tuber 0.3
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307410_10184769 3300031852 Bacteria 1581
2 JGI24752J21851_1000025 3300001976 Bacteria 17520
3 JGI24752J21851_1000290 3300001976 Bacteria 7005
4 JGI24737J22298_10003148 3300001990 Bacteria 5859
5 JGI24750J21931_1000569 3300002070 Bacteria 5653
6 JGI24748J21848_1000032 3300002074 Bacteria 79791
7 JGI24738J21930_10008554 3300002075 Bacteria 2326
8 JGI24034J26672_10000022 3300002239 Bacteria 116342
9 JGI24742J22300_10002393 3300002244 Bacteria 3008
10 JGI24751J29686_10000131 3300002459 Bacteria 37771
11 JGI24751J29686_10004702 3300002459 Bacteria 2773
12 Ga0065704_10074248 3300005289 Bacteria 6425
13 Ga0070658_10057898 3300005327 Bacteria 3153
14 Ga0070658_10089111 3300005327 Bacteria 2541
15 Ga0070690_100000056 3300005330 Bacteria 54517
16 Ga0070670_100000016 3300005331 Bacteria 226440
17 Ga0070670_100004738 3300005331 Bacteria 11415
18 Ga0070666_10000002 3300005335 Bacteria 478684
19 Ga0070666_10000234 3300005335 Bacteria 37494
20 Ga0070680_100593780 3300005336 Bacteria 950
21 Ga0070660_100262282 3300005339 Bacteria 1411
22 Ga0070689_100262712 3300005340 Bacteria 1427
23 Ga0070661_100000010 3300005344 Bacteria 175777
24 Ga0070661_100073006 3300005344 Bacteria 2526
25 Ga0070661_100258818 3300005344 Bacteria 1345
26 Ga0070661_100439951 3300005344 Bacteria 1036
27 Ga0070668_100000055 3300005347 Bacteria 70835
28 Ga0070668_100002537 3300005347 Bacteria 13440
29 Ga0070668_100018168 3300005347 Bacteria 5276
30 Ga0070668_100059983 3300005347 Bacteria 2945
31 Ga0070669_100000008 3300005353 Bacteria 226764
32 Ga0070669_100000170 3300005353 Bacteria 57161
33 Ga0070669_100092037 3300005353 Bacteria 2275
34 Ga0070675_100456021 3300005354 Bacteria 1147
35 Ga0070671_100000010 3300005355 Bacteria 202799
36 Ga0070671_100000130 3300005355 Bacteria 48553
37 Ga0070688_100006407 3300005365 Bacteria 6291
38 Ga0070659_100038384 3300005366 Bacteria 3735
39 Ga0070667_100000302 3300005367 Bacteria 55150
40 Ga0070667_100000528 3300005367 Bacteria 38357
41 Ga0070667_100030953 3300005367 Bacteria 4462
42 Ga0070667_100188098 3300005367 Bacteria 1828
43 Ga0070705_100353896 3300005440 Bacteria 1072
44 Ga0070694_100033072 3300005444 Bacteria 3399
45 Ga0070708_100025077 3300005445 Bacteria 5095
46 Ga0070663_100000399 3300005455 Bacteria 22797
47 Ga0070662_100036344 3300005457 Bacteria 3483
48 Ga0068867_100020259 3300005459 Bacteria 4739
49 Ga0068853_100004771 3300005539 Bacteria 10537
50 Ga0068853_100017074 3300005539 Bacteria 5986
51 Ga0068853_100050453 3300005539 Bacteria 3580
52 Ga0068853_100390437 3300005539 Bacteria 1301
53 Ga0070672_100011152 3300005543 Bacteria 6258
54 Ga0070686_100000335 3300005544 Bacteria 30423
55 Ga0070665_100000036 3300005548 Bacteria 314603
56 Ga0070665_100024360 3300005548 Bacteria 6095
57 Ga0070665_100460289 3300005548 Bacteria 1282
58 Ga0068855_100002793 3300005563 Bacteria 21488
59 Ga0068857_100018763 3300005577 Bacteria 6068
60 Ga0068854_100004423 3300005578 Bacteria 8867
61 Ga0068854_100087726 3300005578 Bacteria 2309
62 Ga0068856_100035571 3300005614 Bacteria 4882
63 Ga0070702_100188892 3300005615 Bacteria 1354
64 Ga0068852_100010922 3300005616 Bacteria 6806
65 Ga0068852_100197837 3300005616 Bacteria 1900
66 Ga0068859_100003191 3300005617 Bacteria 16687
67 Ga0068859_100012151 3300005617 Bacteria 8652
68 Ga0068859_100047999 3300005617 Bacteria 4290
69 Ga0068859_100049814 3300005617 Bacteria 4207
70 Ga0068859_100138182 3300005617 Bacteria 2510
71 Ga0068864_100000017 3300005618 Bacteria 285607
72 Ga0068864_100001042 3300005618 Bacteria 23260
73 Ga0068864_100010218 3300005618 Bacteria 7751
74 Ga0068861_100003657 3300005719 Bacteria 10251
75 Ga0068851_10005869 3300005834 Bacteria 5592
76 Ga0068851_10021463 3300005834 Bacteria 3135
77 Ga0068863_100000018 3300005841 Bacteria 206948
78 Ga0068863_100000030 3300005841 Bacteria 176023
79 Ga0068863_100000095 3300005841 Bacteria 96080
80 Ga0068863_100002858 3300005841 Bacteria 17098
81 Ga0068863_100012604 3300005841 Bacteria 8155
82 Ga0068858_100000681 3300005842 Bacteria 35424
83 Ga0068858_100002740 3300005842 Bacteria 17718
84 Ga0068858_100115029 3300005842 Bacteria 2513
85 Ga0068860_100000001 3300005843 Bacteria 703043
86 Ga0068860_100000416 3300005843 Bacteria 55156
87 Ga0068860_100002747 3300005843 Bacteria 18315
88 Ga0068860_100004481 3300005843 Bacteria 14242
89 Ga0068860_100024420 3300005843 Bacteria 5840
90 Ga0068860_100067363 3300005843 Bacteria 3402
91 Ga0068862_100000010 3300005844 Bacteria 285607
92 Ga0068862_100000092 3300005844 Bacteria 106896
93 Ga0068862_100000350 3300005844 Bacteria 49916
94 Ga0068862_100002141 3300005844 Bacteria 17785
95 Ga0068862_100100991 3300005844 Bacteria 2523
96 Ga0068862_100148557 3300005844 Bacteria 2084
97 Ga0068862_100447277 3300005844 Bacteria 1217
98 Ga0097621_100010271 3300006237 Bacteria 6840
99 Ga0075433_10030095 3300006852 Bacteria 4631
100 Ga0097620_100003191 3300006931 Bacteria 16687
101 Ga0097620_100012151 3300006931 Bacteria 8652
102 Ga0097620_100034037 3300006931 Bacteria 5115
103 Ga0097620_100047998 3300006931 Bacteria 4290
104 Ga0097620_100049814 3300006931 Bacteria 4207
105 Ga0097620_100138199 3300006931 Bacteria 2510
106 Ga0105250_10081817 3300009092 Bacteria 1309
107 Ga0105240_10006522 3300009093 Bacteria 17134
108 Ga0105240_10011027 3300009093 Bacteria 12640
109 Ga0105240_10387309 3300009093 Bacteria 1577
110 Ga0105247_10002227 3300009101 Bacteria 13346
111 Ga0105247_10084015 3300009101 Bacteria 2011
112 Ga0105241_10094602 3300009174 Bacteria 2363
113 Ga0105248_10000105 3300009177 Bacteria 94143
114 Ga0105248_10023642 3300009177 Bacteria 6828
115 Ga0105248_10053377 3300009177 Bacteria 4536
116 Ga0105248_10135477 3300009177 Bacteria 2778
117 Ga0105237_10008636 3300009545 Bacteria 11010
118 Ga0105238_10389950 3300009551 Bacteria 1385
119 Ga0105249_10000026 3300009553 Bacteria 232053
120 Ga0105249_10000100 3300009553 Bacteria 119358
121 Ga0105249_10000207 3300009553 Bacteria 67193
122 Ga0105249_10080737 3300009553 Bacteria 3022
123 Ga0105249_10296592 3300009553 Bacteria 1620
124 Ga0105239_10000881 3300010375 Bacteria 42563
125 Ga0105239_10329387 3300010375 Bacteria 1722
126 Ga0157373_10052580 3300013100 Bacteria 2898
127 Ga0157369_10688757 3300013105 Bacteria 1053
128 Ga0163162_10052573 3300013306 Bacteria 4092
129 Ga0163162_10662994 3300013306 Bacteria 1166
130 Ga0163162_10806206 3300013306 Bacteria 1056
131 Ga0163163_10033470 3300014325 Bacteria 4972
132 Ga0157380_10001897 3300014326 Bacteria 13855
133 Ga0157379_10067976 3300014968 Bacteria 3186
134 Ga0157379_10124170 3300014968 Bacteria 2323
135 Ga0157379_10226897 3300014968 Bacteria 1693
136 Ga0163161_10000008 3300017792 Bacteria 294642
137 Ga0213874_10056297 3300021377 Bacteria 1220
138 Ga0213875_10005067 3300021388 Bacteria 7133
139 Ga0207672_1000406 3300025223 Bacteria 5462
140 Ga0207697_10000036 3300025315 Bacteria 49927
141 Ga0207656_10002438 3300025321 Bacteria 6264
142 Ga0207642_10003912 3300025899 Bacteria 4750
143 Ga0207710_10078608 3300025900 Bacteria 1526
144 Ga0207680_10000004 3300025903 Bacteria 827324
145 Ga0207680_10000097 3300025903 Bacteria 40203
146 Ga0207647_10003089 3300025904 Bacteria 12516
147 Ga0207647_10071961 3300025904 Bacteria 2085
148 Ga0207645_10279165 3300025907 Bacteria 1109
149 Ga0207705_10160765 3300025909 Bacteria 1687
150 Ga0207654_10151338 3300025911 Bacteria 1489
151 Ga0207695_10011571 3300025913 Bacteria 10672
152 Ga0207695_10076865 3300025913 Bacteria 3393
153 Ga0207695_10534522 3300025913 Bacteria 1054
154 Ga0207657_10184163 3300025919 Bacteria 1687
155 Ga0207657_10279565 3300025919 Bacteria 1325
156 Ga0207649_10000165 3300025920 Bacteria 54047
157 Ga0207649_10090678 3300025920 Bacteria 2001
158 Ga0207681_10000002 3300025923 Bacteria 985597
159 Ga0207681_10000297 3300025923 Bacteria 36667
160 Ga0207681_10228551 3300025923 Bacteria 1443
161 Ga0207694_10010337 3300025924 Bacteria 7035
162 Ga0207650_10000057 3300025925 Bacteria 156913
163 Ga0207650_10002525 3300025925 Bacteria 12696
164 Ga0207659_10433975 3300025926 Bacteria 1104
165 Ga0207644_10000002 3300025931 Bacteria 942221
166 Ga0207644_10000169 3300025931 Bacteria 46645
167 Ga0207644_10000755 3300025931 Bacteria 20528
168 Ga0207706_10008829 3300025933 Bacteria 9274
169 Ga0207686_10156325 3300025934 Bacteria 1593
170 Ga0207670_10224729 3300025936 Bacteria 1439
171 Ga0207691_10022853 3300025940 Bacteria 5895
172 Ga0207711_10000031 3300025941 Bacteria 203323
173 Ga0207711_10004024 3300025941 Bacteria 12617
174 Ga0207667_10009491 3300025949 Bacteria 11454
175 Ga0207712_10000001 3300025961 Bacteria 750309
176 Ga0207712_10000008 3300025961 Bacteria 527957
177 Ga0207712_10000234 3300025961 Bacteria 54386
178 Ga0207712_10016841 3300025961 Bacteria 4740
179 Ga0207668_10000299 3300025972 Bacteria 32507
180 Ga0207668_10000383 3300025972 Bacteria 28143
181 Ga0207668_10038338 3300025972 Bacteria 3215
182 Ga0207640_10000532 3300025981 Bacteria 22823
183 Ga0207640_10062940 3300025981 Bacteria 2464
184 Ga0207658_10000263 3300025986 Bacteria 55175
185 Ga0207658_10001812 3300025986 Bacteria 15990
186 Ga0207658_10004409 3300025986 Bacteria 9786
187 Ga0207658_10010118 3300025986 Bacteria 6406
188 Ga0207658_10128633 3300025986 Bacteria 2031
189 Ga0207703_10001677 3300026035 Bacteria 19921
190 Ga0207703_10004927 3300026035 Bacteria 10835
191 Ga0207703_10010364 3300026035 Bacteria 7295
192 Ga0207639_10003464 3300026041 Bacteria 10611
193 Ga0207639_10106509 3300026041 Bacteria 2276
194 Ga0207678_10005875 3300026067 Bacteria 10939
195 Ga0207678_10062629 3300026067 Bacteria 3196
196 Ga0207678_10098920 3300026067 Bacteria 2492
197 Ga0207702_10126853 3300026078 Bacteria 2292
198 Ga0207641_10000001 3300026088 Bacteria 1180841
199 Ga0207641_10000002 3300026088 Bacteria 981004
200 Ga0207641_10000148 3300026088 Bacteria 99601
201 Ga0207641_10004136 3300026088 Bacteria 12646
202 Ga0207641_10006789 3300026088 Bacteria 9590
203 Ga0207641_10016139 3300026088 Bacteria 6116
204 Ga0207641_10051146 3300026088 Bacteria 3499
205 Ga0207648_10024927 3300026089 Bacteria 5332
206 Ga0207676_10000005 3300026095 Bacteria 698744
207 Ga0207676_10001987 3300026095 Bacteria 14886
208 Ga0207676_10010613 3300026095 Bacteria 6566
209 Ga0207674_10013355 3300026116 Bacteria 9118
210 Ga0207674_10071376 3300026116 Bacteria 3489
211 Ga0207675_100001093 3300026118 Bacteria 26859
212 Ga0207675_100001468 3300026118 Bacteria 23648
213 Ga0207698_10162790 3300026142 Bacteria 1954
214 Ga0268266_10000042 3300028379 Bacteria 316826
215 Ga0268266_10045013 3300028379 Bacteria 3774
216 Ga0268266_10360899 3300028379 Bacteria 1367
217 Ga0268265_10000003 3300028380 Bacteria 949201
218 Ga0268265_10000091 3300028380 Bacteria 115237
219 Ga0268265_10000339 3300028380 Bacteria 50894
220 Ga0268265_10000481 3300028380 Bacteria 41838
221 Ga0268265_10018638 3300028380 Bacteria 4812
222 Ga0268265_10309194 3300028380 Bacteria 1426
223 Ga0268265_10525435 3300028380 Bacteria 1119
224 Ga0268265_10563376 3300028380 Bacteria 1083
225 Ga0268264_10000006 3300028381 Bacteria 827324
226 Ga0268264_10000010 3300028381 Bacteria 596543
227 Ga0268264_10000184 3300028381 Bacteria 131402
228 Ga0268264_10011192 3300028381 Bacteria 7410
229 Ga0268264_10036943 3300028381 Bacteria 4026
230 Ga0316178_1069857 3300030735 Bacteria 4103
231 Ga0316180_1003705 3300030736 Bacteria 1477
232 Ga0307513_10056930 3300031456 Bacteria 4170
233 Ga0307405_10011966 3300031731 Bacteria 4572
234 Ga0307405_10153696 3300031731 Bacteria 1621
235 Ga0307413_10091753 3300031824 Bacteria 1980
236 Ga0307413_10147577 3300031824 Bacteria 1634
237 Ga0307413_10227091 3300031824 Bacteria 1368
238 Ga0307413_10284414 3300031824 Bacteria 1246
239 Ga0307410_10213192 3300031852 Bacteria 1481
240 Ga0307406_10005374 3300031901 Bacteria 7012
241 Ga0307406_10188390 3300031901 Bacteria 1508
242 Ga0307407_10016082 3300031903 Bacteria 3716
243 Ga0307412_10000339 3300031911 Bacteria 29443
244 Ga0307412_10003203 3300031911 Bacteria 9094
245 Ga0307412_10011030 3300031911 Bacteria 5221
246 Ga0307412_10101174 3300031911 Bacteria 2038
247 Ga0307409_100057340 3300031995 Bacteria 3018
248 Ga0307409_100174290 3300031995 Bacteria 1896
249 Ga0307416_100541581 3300032002 Bacteria 1236
250 Ga0307414_10000446 3300032004 Bacteria 21819
251 Ga0307411_10044860 3300032005 Bacteria 2840
252 Ga0307411_10509067 3300032005 Bacteria 1019
253 Ga0307415_100118952 3300032126 Bacteria 1976
254 Ga0395900_0016113 3300037418 Bacteria 7614
255 Ga0395900_0182578 3300037418 Bacteria 2131
256 Ga0395905_0072954 3300037471 Bacteria 3217
257 Ga0436364_1452176 3300037853 Bacteria 7170
258 Ga0436363_0364437 3300039450 Bacteria 4989
259 Ga0439449_0022963 3300042007 Bacteria 2335
260 Ga0495606_0002862 3300046507 Bacteria 19095
261 Ga0495625_0026303 3300046660 Bacteria 4399
262 Ga0495671_0006478 3300046692 Bacteria 6764
263 Ga0495686_0000119 3300047472 Bacteria 165244
264 Ga0495686_0000909 3300047472 Bacteria 37095
265 Ga0495686_0002709 3300047472 Bacteria 16219
266 Ga0495686_0022745 3300047472 Bacteria 4144
267 Ga0495686_0045446 3300047472 Bacteria 2778
268 Ga0495686_0068589 3300047472 Bacteria 2188
269 Ga0496102_0000416 3300048905 Bacteria 49243
270 Ga0496102_0015020 3300048905 Bacteria 6739
271 Ga0496103_0000270 3300048906 Bacteria 49232
272 Ga0496105_0045554 3300048908 Bacteria 3619
273 Ga0496107_0060863 3300048910 Bacteria 2733
274 Ga0496116_0002146 3300048919 Bacteria 21002
275 Ga0496117_0000794 3300048920 Bacteria 49243
276 Ga0496117_0018798 3300048920 Bacteria 5706
277 Ga0496117_0027355 3300048920 Bacteria 4446
278 Ga0496117_0029838 3300048920 Bacteria 4196
279 Ga0496117_0059674 3300048920 Bacteria 2633
280 Ga0496118_0000332 3300048921 Bacteria 80480
281 Ga0496118_0000826 3300048921 Bacteria 49243
282 Ga0496118_0084543 3300048921 Bacteria 2213
283 Ga0496118_0089610 3300048921 Bacteria 2123
284 Ga0496119_0021820 3300048922 Bacteria 4610
285 Ga0496121_0000066 3300048924 Bacteria 267065
286 Ga0496121_0010346 3300048924 Bacteria 10541
287 Ga0496121_0249096 3300048924 Bacteria 1233
288 Ga0496124_0000871 3300048927 Bacteria 49243
289 Ga0496125_0219841 3300048928 Bacteria 1225
290 Ga0496125_0289031 3300048928 Bacteria 1011
291 Ga0496126_0007663 3300048929 Bacteria 11784
292 Ga0496126_0365813 3300048929 Bacteria 1177
293 Ga0501292_000008 3300049515 Bacteria 83748
294 Ga0501294_000177 3300049517 Bacteria 7741
295 Ga0501034_0009896 3300049571 Bacteria 9967
296 Ga0501043_0009842 3300049579 Bacteria 7495
297 Ga0501206_001150 3300049653 Bacteria 3299
298 Ga0501222_001718 3300049662 Bacteria 3043
299 Ga0501223_000244 3300049663 Bacteria 13908
300 Ga0501223_003383 3300049663 Bacteria 3483
301 Ga0501224_000055 3300049664 Bacteria 13941
302 Ga0501233_001312 3300049668 Bacteria 4251
303 Ga0501235_006478 3300049669 Bacteria 2550
304 Ga0501235_021225 3300049669 Bacteria 1443
305 Ga0501257_000071 3300049686 Bacteria 26120
306 Ga0501259_000078 3300049688 Bacteria 13506
307 Ga0501261_000521 3300049690 Bacteria 4932
308 Ga0501225_0000377 3300049705 Bacteria 14059
309 Ga0501225_0006967 3300049705 Bacteria 3291
310 Ga0501234_001236 3300049707 Bacteria 4016
311 Ga0501245_000516 3300049708 Bacteria 4706
312 Ga0501263_002480 3300049760 Bacteria 1885
313 Ga0501272_002232 3300049769 Bacteria 1908
314 Ga0501279_000002 3300049775 Bacteria 205937
315 Ga0501280_000003 3300049776 Bacteria 93762
316 Ga0501280_000241 3300049776 Bacteria 13745
317 Ga0501281_00526 3300049777 Bacteria 3525
318 Ga0501282_000182 3300049778 Bacteria 7648
319 Ga0501035_0467371 3300049822 Bacteria 1042
320 Ga0501226_000140 3300049853 Bacteria 14053
321 nmdc:mga0a205_19624_c1 3300050515 Bacteria 6376
322 Ga0500643_005422 3300053087 Bacteria 5498
323 Ga0500643_054956 3300053087 Bacteria 1128
324 Ga0500556_0000139 3300053104 Bacteria 60701
325 Ga0500557_025117 3300053105 Bacteria 1749
326 Ga0500642_0000011 3300053130 Bacteria 215963
327 Ga0500559_0045819 3300053136 Bacteria 1916
328 Ga0500616_0036508 3300053153 Bacteria 2667
329 Ga0500624_000200 3300053157 Bacteria 23534
330 Ga0500636_0009629 3300053177 Bacteria 5622
331 Ga0500636_0025770 3300053177 Bacteria 3476
332 Ga0500645_000795 3300053730 Bacteria 18914
333 2585263635 2582581305 Bacteria 4895574
334 2885428058 2885427238 Bacteria 2291351
335 2896430466 2896429255 Bacteria 2557483
336 Ga0307410_10184769
337 JGI24752J21851_1000025
338 JGI24752J21851_1000290
339 JGI24737J22298_10003148
340 JGI24750J21931_1000569
341 JGI24748J21848_1000032
342 JGI24738J21930_10008554
343 JGI24034J26672_10000022
344 JGI24742J22300_10002393
345 JGI24751J29686_10000131
346 JGI24751J29686_10004702
347 Ga0065704_10074248
348 Ga0070658_10057898
349 Ga0070658_10089111
350 Ga0070690_100000056
351 Ga0070670_100000016
352 Ga0070670_100004738
353 Ga0070666_10000002
354 Ga0070666_10000234
355 Ga0070680_100593780
356 Ga0070660_100262282
357 Ga0070689_100262712
358 Ga0070661_100000010
359 Ga0070661_100073006
360 Ga0070661_100258818
361 Ga0070661_100439951
362 Ga0070668_100000055
363 Ga0070668_100002537
364 Ga0070668_100018168
365 Ga0070668_100059983
366 Ga0070669_100000008
367 Ga0070669_100000170
368 Ga0070669_100092037
369 Ga0070675_100456021
370 Ga0070671_100000010
371 Ga0070671_100000130
372 Ga0070688_100006407
373 Ga0070659_100038384
374 Ga0070667_100000302
375 Ga0070667_100000528
376 Ga0070667_100030953
377 Ga0070667_100188098
378 Ga0070705_100353896
379 Ga0070694_100033072
380 Ga0070708_100025077
381 Ga0070663_100000399
382 Ga0070662_100036344
383 Ga0068867_100020259
384 Ga0068853_100004771
385 Ga0068853_100017074
386 Ga0068853_100050453
387 Ga0068853_100390437
388 Ga0070672_100011152
389 Ga0070686_100000335
390 Ga0070665_100000036
391 Ga0070665_100024360
392 Ga0070665_100460289
393 Ga0068855_100002793
394 Ga0068857_100018763
395 Ga0068854_100004423
396 Ga0068854_100087726
397 Ga0068856_100035571
398 Ga0070702_100188892
399 Ga0068852_100010922
400 Ga0068852_100197837
401 Ga0068859_100003191
402 Ga0068859_100012151
403 Ga0068859_100047999
404 Ga0068859_100049814
405 Ga0068859_100138182
406 Ga0068864_100000017
407 Ga0068864_100001042
408 Ga0068864_100010218
409 Ga0068861_100003657
410 Ga0068851_10005869
411 Ga0068851_10021463
412 Ga0068863_100000018
413 Ga0068863_100000030
414 Ga0068863_100000095
415 Ga0068863_100002858
416 Ga0068863_100012604
417 Ga0068858_100000681
418 Ga0068858_100002740
419 Ga0068858_100115029
420 Ga0068860_100000001
421 Ga0068860_100000416
422 Ga0068860_100002747
423 Ga0068860_100004481
424 Ga0068860_100024420
425 Ga0068860_100067363
426 Ga0068862_100000010
427 Ga0068862_100000092
428 Ga0068862_100000350
429 Ga0068862_100002141
430 Ga0068862_100100991
431 Ga0068862_100148557
432 Ga0068862_100447277
433 Ga0097621_100010271
434 Ga0075433_10030095
435 Ga0097620_100003191
436 Ga0097620_100012151
437 Ga0097620_100034037
438 Ga0097620_100047998
439 Ga0097620_100049814
440 Ga0097620_100138199
441 Ga0105250_10081817
442 Ga0105240_10006522
443 Ga0105240_10011027
444 Ga0105240_10387309
445 Ga0105247_10002227
446 Ga0105247_10084015
447 Ga0105241_10094602
448 Ga0105248_10000105
449 Ga0105248_10023642
450 Ga0105248_10053377
451 Ga0105248_10135477
452 Ga0105237_10008636
453 Ga0105238_10389950
454 Ga0105249_10000026
455 Ga0105249_10000100
456 Ga0105249_10000207
457 Ga0105249_10080737
458 Ga0105249_10296592
459 Ga0105239_10000881
460 Ga0105239_10329387
461 Ga0157373_10052580
462 Ga0157369_10688757
463 Ga0163162_10052573
464 Ga0163162_10662994
465 Ga0163162_10806206
466 Ga0163163_10033470
467 Ga0157380_10001897
468 Ga0157379_10067976
469 Ga0157379_10124170
470 Ga0157379_10226897
471 Ga0163161_10000008
472 Ga0213874_10056297
473 Ga0213875_10005067
474 Ga0207672_1000406
475 Ga0207697_10000036
476 Ga0207656_10002438
477 Ga0207642_10003912
478 Ga0207710_10078608
479 Ga0207680_10000004
480 Ga0207680_10000097
481 Ga0207647_10003089
482 Ga0207647_10071961
483 Ga0207645_10279165
484 Ga0207705_10160765
485 Ga0207654_10151338
486 Ga0207695_10011571
487 Ga0207695_10076865
488 Ga0207695_10534522
489 Ga0207657_10184163
490 Ga0207657_10279565
491 Ga0207649_10000165
492 Ga0207649_10090678
493 Ga0207681_10000002
494 Ga0207681_10000297
495 Ga0207681_10228551
496 Ga0207694_10010337
497 Ga0207650_10000057
498 Ga0207650_10002525
499 Ga0207659_10433975
500 Ga0207644_10000002
501 Ga0207644_10000169
502 Ga0207644_10000755
503 Ga0207706_10008829
504 Ga0207686_10156325
505 Ga0207670_10224729
506 Ga0207691_10022853
507 Ga0207711_10000031
508 Ga0207711_10004024
509 Ga0207667_10009491
510 Ga0207712_10000001
511 Ga0207712_10000008
512 Ga0207712_10000234
513 Ga0207712_10016841
514 Ga0207668_10000299
515 Ga0207668_10000383
516 Ga0207668_10038338
517 Ga0207640_10000532
518 Ga0207640_10062940
519 Ga0207658_10000263
520 Ga0207658_10001812
521 Ga0207658_10004409
522 Ga0207658_10010118
523 Ga0207658_10128633
524 Ga0207703_10001677
525 Ga0207703_10004927
526 Ga0207703_10010364
527 Ga0207639_10003464
528 Ga0207639_10106509
529 Ga0207678_10005875
530 Ga0207678_10062629
531 Ga0207678_10098920
532 Ga0207702_10126853
533 Ga0207641_10000001
534 Ga0207641_10000002
535 Ga0207641_10000148
536 Ga0207641_10004136
537 Ga0207641_10006789
538 Ga0207641_10016139
539 Ga0207641_10051146
540 Ga0207648_10024927
541 Ga0207676_10000005
542 Ga0207676_10001987
543 Ga0207676_10010613
544 Ga0207674_10013355
545 Ga0207674_10071376
546 Ga0207675_100001093
547 Ga0207675_100001468
548 Ga0207698_10162790
549 Ga0268266_10000042
550 Ga0268266_10045013
551 Ga0268266_10360899
552 Ga0268265_10000003
553 Ga0268265_10000091
554 Ga0268265_10000339
555 Ga0268265_10000481
556 Ga0268265_10018638
557 Ga0268265_10309194
558 Ga0268265_10525435
559 Ga0268265_10563376
560 Ga0268264_10000006
561 Ga0268264_10000010
562 Ga0268264_10000184
563 Ga0268264_10011192
564 Ga0268264_10036943
565 Ga0316178_1069857
566 Ga0316180_1003705
567 Ga0307513_10056930
568 Ga0307405_10011966
569 Ga0307405_10153696
570 Ga0307413_10091753
571 Ga0307413_10147577
572 Ga0307413_10227091
573 Ga0307413_10284414
574 Ga0307410_10213192
575 Ga0307406_10005374
576 Ga0307406_10188390
577 Ga0307407_10016082
578 Ga0307412_10000339
579 Ga0307412_10003203
580 Ga0307412_10011030
581 Ga0307412_10101174
582 Ga0307409_100057340
583 Ga0307409_100174290
584 Ga0307416_100541581
585 Ga0307414_10000446
586 Ga0307411_10044860
587 Ga0307411_10509067
588 Ga0307415_100118952
589 Ga0395900_0016113
590 Ga0395900_0182578
591 Ga0395905_0072954
592 Ga0436364_1452176
593 Ga0436363_0364437
594 Ga0439449_0022963
595 Ga0495606_0002862
596 Ga0495625_0026303
597 Ga0495671_0006478
598 Ga0495686_0000119
599 Ga0495686_0000909
600 Ga0495686_0002709
601 Ga0495686_0022745
602 Ga0495686_0045446
603 Ga0495686_0068589
604 Ga0496102_0000416
605 Ga0496102_0015020
606 Ga0496103_0000270
607 Ga0496105_0045554
608 Ga0496107_0060863
609 Ga0496116_0002146
610 Ga0496117_0000794
611 Ga0496117_0018798
612 Ga0496117_0027355
613 Ga0496117_0029838
614 Ga0496117_0059674
615 Ga0496118_0000332
616 Ga0496118_0000826
617 Ga0496118_0084543
618 Ga0496118_0089610
619 Ga0496119_0021820
620 Ga0496121_0000066
621 Ga0496121_0010346
622 Ga0496121_0249096
623 Ga0496124_0000871
624 Ga0496125_0219841
625 Ga0496125_0289031
626 Ga0496126_0007663
627 Ga0496126_0365813
628 Ga0501292_000008
629 Ga0501294_000177
630 Ga0501034_0009896
631 Ga0501043_0009842
632 Ga0501206_001150
633 Ga0501222_001718
634 Ga0501223_000244
635 Ga0501223_003383
636 Ga0501224_000055
637 Ga0501233_001312
638 Ga0501235_006478
639 Ga0501235_021225
640 Ga0501257_000071
641 Ga0501259_000078
642 Ga0501261_000521
643 Ga0501225_0000377
644 Ga0501225_0006967
645 Ga0501234_001236
646 Ga0501245_000516
647 Ga0501263_002480
648 Ga0501272_002232
649 Ga0501279_000002
650 Ga0501280_000003
651 Ga0501280_000241
652 Ga0501281_00526
653 Ga0501282_000182
654 Ga0501035_0467371
655 Ga0501226_000140
656 nmdc:mga0a205_19624_c1
657 Ga0500643_005422
658 Ga0500643_054956
659 Ga0500556_0000139
660 Ga0500557_025117
661 Ga0500642_0000011
662 Ga0500559_0045819
663 Ga0500616_0036508
664 Ga0500624_000200
665 Ga0500636_0009629
666 Ga0500636_0025770
667 Ga0500645_000795
668 2585263635
669 2885428058
670 2896430466

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00398

RrnaAD

Ribosomal RNA adenine dimethylase

22

279

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jxj-assembly1.cif.gz_A crystal structure of ribosomal rna small subunit methyltransferase a from rickettsia bellii determined by iodide sad phasing 0.9203 31 274
6ifv-assembly2.cif.gz_B c-terminal truncated ksga from bacillus subtilis 168 0.9066 14 210
4jxj-assembly1.cif.gz_A crystal structure of ribosomal rna small subunit methyltransferase a from rickettsia bellii determined by iodide sad phasing 0.906 31 274
6ifv-assembly1.cif.gz_A c-terminal truncated ksga from bacillus subtilis 168 0.9047 14 210
6ifw-assembly2.cif.gz_B crystal structure of chimeric construct of ksga with loop 1 from erm 0.8911 30 274
ID Description Score Start End Superfamily
af_Q54M56_2_236_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9452 10 214 3.40.50.150
af_Q58435_1_185_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9312 26 212 3.40.50.150
4jxjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9311 31 214 3.40.50.150
4jxjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9262 31 214 3.40.50.150
6ifwA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9197 31 214 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A176EDM8-F1-model_v4 Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) 0.9853 10 278 GO:0003723
GO:0005829
GO:0052908
AF-W1SAA5-F1-model_v4 16S rRNA methyltransferase 0.9832 77 278 GO:0000179
GO:0003723
GO:0005829
AF-A0A2W6VQP1-F1-model_v4 Ribosomal RNA small subunit methyltransferase A (EC 2.1.1.182) (16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase) (16S rRNA dimethyladenosine transferase) (16S rRNA dimethylase) (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) 0.9723 9 276 GO:0003723
GO:0005829
GO:0052908
AF-A0A351T7M2-F1-model_v4 16S rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase 0.9712 30 205 GO:0000179
GO:0003723
GO:0005829
AF-A0A4Q5T0R0-F1-model_v4 16S rRNA (Adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA (EC 2.1.1.182) 0.9704 70 277 GO:0003723
GO:0005829
GO:0052908

Map