F412229

General Info

Members Datasets Scaffolds Average Seq Length
335 221 322 332

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10003306|Ga0105237_1000330613
Length 355
Sequence LGQKNIFLPIFLTHIFDAQNIVGMSVEKILNDWKKLKFKPVYWLEGEEEFYIDQLVNYAEHKILSEAEAGFNLTVFYGKDADWTAVINACRRYPMFAERQVVLLKEAQQMRDIDKLEAYIDKPLSSTVFVVAYKEKKVDGRSKLAKMLKEKAELYTAKKLYDNQLPEWTSELIRGKGYEITQKALLLLVDHIGNDLSRINNEIEKLLVNLAGRKNITEDDIERYVGVSKEYNVFELQDAFAKKDRVKAIRIIQYFESNPKAAPIQLILPSIYNFFSKAYMIFGQPARDEKGVAAAIGVNPFFVKDYLAAVRNYNYEGIENGLLLLHAYNLKSVGVGSAGTEDASLLKELVVKMMI

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 2738541278 Niastella sp. CF465 Isolate Unclassified
4 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
5 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
6 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
7 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
8 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
9 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
10 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
11 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
12 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
13 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
14 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
15 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
16 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
17 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
18 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
19 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
20 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
21 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
22 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
23 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
26 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
27 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
28 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
29 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
30 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
31 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
32 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
33 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
34 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
35 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
36 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
37 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
38 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
39 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
40 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
41 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
42 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
43 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
44 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
45 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
46 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
47 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
48 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
49 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
50 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
51 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
52 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
53 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
54 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
55 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
56 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
57 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
58 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
59 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
60 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
61 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
64 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
65 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
66 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
67 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
68 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
69 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
70 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
71 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
72 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
73 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
74 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
75 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
76 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
77 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
78 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
79 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
80 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
81 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
82 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
83 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
84 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
85 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
86 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
87 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
88 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
89 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
90 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
91 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
92 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
93 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
94 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
95 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
96 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
97 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
98 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
99 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
100 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
101 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
102 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
103 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
104 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
105 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
106 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
107 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
109 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
110 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
112 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
113 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
115 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
117 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
147 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
148 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
149 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
150 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
151 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
152 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
153 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
154 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
155 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
156 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
157 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
158 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
159 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
160 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
161 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
162 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
163 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
164 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
165 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
166 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
167 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
168 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
169 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
170 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
171 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
172 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
173 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
174 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
175 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
176 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
177 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
178 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
179 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
180 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
181 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
182 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
185 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
186 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
187 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
188 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
196 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
197 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
198 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
199 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
200 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
201 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
202 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
203 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
204 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
205 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
206 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
207 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
208 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
209 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
210 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
211 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
212 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
213 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
214 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
215 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
216 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
217 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
218 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
219 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
220 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
221 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.82
Metatranscriptomes 0
Isolates 4.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.63
Nodule 0
Rhizoplane 0.9
Rhizosphere 74.93
Stem 0
Stem Tuber 0
Unclassified 9.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_6871790 2162886011 Bacteria 1993
2 MBSR1b_contig_8539638 2162886012 Bacteria 1825
3 JGI24740J21852_10000816 3300001979 Bacteria 13719
4 JGI24739J22299_10001051 3300001989 Bacteria 10260
5 JGI25154J39366_1000047 3300002738 Bacteria 126449
6 JGI25157J39369_1006779 3300002741 Bacteria 1709
7 JGI25153J46596_10009659 3300003215 Bacteria 4445
8 rootH1_10038181 3300003316 Bacteria 4128
9 rootH1_10038181 3300003323 Bacteria 10550
10 rootH2_10009422 3300003320 Bacteria 9760
11 rootH2_10009424 3300003320 Bacteria 3436
12 rootH2_10013617 3300003320 Bacteria 9980
13 rootH2_10069037 3300003320 Unclassified 3607
14 rootH2_10143187 3300003320 Bacteria 1153
15 rootH2_10144348 3300003320 Bacteria 3277
16 rootH2_10240640 3300003320 Bacteria 2995
17 rootL2_10133707 3300003322 Bacteria 1739
18 rootH1_10068438 3300003323 Bacteria 6465
19 JGI25160J50197_1006253 3300003354 Bacteria 4839
20 JGI25160J50197_1007207 3300003354 Bacteria 4379
21 JGI25160J50197_1008452 3300003354 Bacteria 3920
22 Ga0055535_1002140 3300003761 Bacteria 7708
23 Ga0055542_1017013 3300003762 Bacteria 1133
24 Ga0055528_1000904 3300003790 Bacteria 20018
25 Ga0055530_10000546 3300003791 Bacteria 32621
26 Ga0055531_10000245 3300003794 Bacteria 59122
27 Ga0065165_1000725 3300005262 Bacteria 46083
28 Ga0065165_1021547 3300005262 Bacteria 2236
29 Ga0065712_10008267 3300005290 Bacteria 3308
30 Ga0065715_10127794 3300005293 Bacteria 2079
31 Ga0065707_10156157 3300005295 Bacteria 1570
32 Ga0070676_10084887 3300005328 Bacteria 1928
33 Ga0070683_100002349 3300005329 Bacteria 15014
34 Ga0070670_100011373 3300005331 Bacteria 7608
35 Ga0070670_100037886 3300005331 Bacteria 4147
36 Ga0068869_100022268 3300005334 Bacteria 4365
37 Ga0068869_100080095 3300005334 Bacteria 2435
38 Ga0070666_10007569 3300005335 Bacteria 6699
39 Ga0068868_100265412 3300005338 Bacteria 1449
40 Ga0070660_100167913 3300005339 Bacteria 1771
41 Ga0070689_100053077 3300005340 Bacteria 3136
42 Ga0070691_10028221 3300005341 Bacteria 2621
43 Ga0070692_10227068 3300005345 Bacteria 1106
44 Ga0070675_100004073 3300005354 Bacteria 11096
45 Ga0070671_100012652 3300005355 Bacteria 6801
46 Ga0070673_100084135 3300005364 Bacteria 2586
47 Ga0070688_100001664 3300005365 Bacteria 11122
48 Ga0070659_100020444 3300005366 Bacteria 5028
49 Ga0070667_100005481 3300005367 Bacteria 10593
50 Ga0070678_100086190 3300005456 Bacteria 2395
51 Ga0070662_100006736 3300005457 Bacteria 7426
52 Ga0070681_10151190 3300005458 Bacteria 2248
53 Ga0068867_100027826 3300005459 Bacteria 4066
54 Ga0068867_100089089 3300005459 Bacteria 2339
55 Ga0070698_100015364 3300005471 Bacteria 8090
56 Ga0070679_100004103 3300005530 Bacteria 13433
57 Ga0070679_100128444 3300005530 Bacteria 2516
58 Ga0070684_100022746 3300005535 Bacteria 5233
59 Ga0068853_100000201 3300005539 Bacteria 41960
60 Ga0068853_100426741 3300005539 Unclassified 1244
61 Ga0070672_100014038 3300005543 Bacteria 5667
62 Ga0070686_100040228 3300005544 Unclassified 2916
63 Ga0070665_100000016 3300005548 Bacteria 451538
64 Ga0068855_100002958 3300005563 Bacteria 20766
65 Ga0068855_100008654 3300005563 Bacteria 12297
66 Ga0070664_100065749 3300005564 Bacteria 3095
67 Ga0068857_100009218 3300005577 Bacteria 8561
68 Ga0068857_100065379 3300005577 Bacteria 3234
69 Ga0068857_100364409 3300005577 Bacteria 1340
70 Ga0068854_100058070 3300005578 Unclassified 2792
71 Ga0068856_100073117 3300005614 Unclassified 3395
72 Ga0068856_100076945 3300005614 Unclassified 3305
73 Ga0068852_100002349 3300005616 Bacteria 13027
74 Ga0068859_100181176 3300005617 Bacteria 2189
75 Ga0068861_100001097 3300005719 Bacteria 16748
76 Ga0068860_100000026 3300005843 Bacteria 270483
77 Ga0068860_100004401 3300005843 Bacteria 14392
78 Ga0068860_100005412 3300005843 Bacteria 12953
79 Ga0068862_100011567 3300005844 Bacteria 7280
80 Ga0075366_10074650 3300006195 Bacteria 2022
81 Ga0097621_100000027 3300006237 Bacteria 71873
82 Ga0075370_10162264 3300006353 Bacteria 1312
83 Ga0068871_100000107 3300006358 Bacteria 50575
84 Ga0068871_100094683 3300006358 Bacteria 2493
85 Ga0075428_100011686 3300006844 Bacteria 9771
86 Ga0075430_100010761 3300006846 Bacteria 7753
87 Ga0075431_100098990 3300006847 Unclassified 3009
88 Ga0075431_100285036 3300006847 Bacteria 1672
89 Ga0075429_100004950 3300006880 Bacteria 11474
90 Ga0075429_100033563 3300006880 Bacteria 4460
91 Ga0097620_100181184 3300006931 Bacteria 2189
92 Ga0105240_10000258 3300009093 Bacteria 105011
93 Ga0105240_10000715 3300009093 Bacteria 60725
94 Ga0105240_10001801 3300009093 Bacteria 36072
95 Ga0105240_10003107 3300009093 Bacteria 26115
96 Ga0105240_10031115 3300009093 Bacteria 6924
97 Ga0105240_10058973 3300009093 Bacteria 4791
98 Ga0105240_10065724 3300009093 Bacteria 4501
99 Ga0105240_10065737 3300009093 Unclassified 4501
100 Ga0105240_10370142 3300009093 Unclassified 1620
101 Ga0105240_10455022 3300009093 Unclassified 1431
102 Ga0111539_10005231 3300009094 Bacteria 16809
103 Ga0114129_10073348 3300009147 Bacteria 4768
104 Ga0114129_10337549 3300009147 Unclassified 2000
105 Ga0105241_10000955 3300009174 Bacteria 21852
106 Ga0105241_10138461 3300009174 Unclassified 1979
107 Ga0105242_10063027 3300009176 Bacteria 3053
108 Ga0105237_10003306 3300009545 Bacteria 19208
109 Ga0105237_10006269 3300009545 Bacteria 13232
110 Ga0105237_10014376 3300009545 Bacteria 8282
111 Ga0105237_10041333 3300009545 Bacteria 4650
112 Ga0105238_10002148 3300009551 Bacteria 19937
113 Ga0105238_10108388 3300009551 Unclassified 2758
114 Ga0105249_10007683 3300009553 Bacteria 9397
115 Ga0105239_10000591 3300010375 Bacteria 51658
116 Ga0105239_10001037 3300010375 Bacteria 38729
117 Ga0105239_10006683 3300010375 Bacteria 13323
118 Ga0105239_10017967 3300010375 Bacteria 7820
119 Ga0105239_10030489 3300010375 Bacteria 5929
120 Ga0105239_10094636 3300010375 Bacteria 3300
121 Ga0157373_10016571 3300013100 Bacteria 5372
122 Ga0157373_10019702 3300013100 Unclassified 4907
123 Ga0157373_10122222 3300013100 Bacteria 1830
124 Ga0157371_10000741 3300013102 Bacteria 38124
125 Ga0157371_10003291 3300013102 Bacteria 14785
126 Ga0157371_10003413 3300013102 Bacteria 14431
127 Ga0157371_10007516 3300013102 Bacteria 8818
128 Ga0157370_10000242 3300013104 Bacteria 69678
129 Ga0157370_10007033 3300013104 Bacteria 12285
130 Ga0157370_10007210 3300013104 Bacteria 12134
131 Ga0157370_10034872 3300013104 Bacteria 4896
132 Ga0157370_10079275 3300013104 Bacteria 3093
133 Ga0157369_10021531 3300013105 Bacteria 7212
134 Ga0157369_10034266 3300013105 Bacteria 5574
135 Ga0157374_10000002 3300013296 Bacteria 1054226
136 Ga0157378_10040240 3300013297 Bacteria 4144
137 Ga0163162_10002356 3300013306 Bacteria 17749
138 Ga0163162_10004559 3300013306 Bacteria 13349
139 Ga0163162_10005116 3300013306 Bacteria 12641
140 Ga0163162_10005339 3300013306 Bacteria 12402
141 Ga0163162_10062079 3300013306 Bacteria 3776
142 Ga0163162_10130789 3300013306 Bacteria 2618
143 Ga0157372_10000618 3300013307 Bacteria 38797
144 Ga0157372_10000666 3300013307 Bacteria 37795
145 Ga0157372_10016345 3300013307 Bacteria 7963
146 Ga0157372_10125004 3300013307 Bacteria 2957
147 Ga0157375_10000336 3300013308 Bacteria 42479
148 Ga0163163_10085000 3300014325 Bacteria 3172
149 Ga0163163_10109841 3300014325 Unclassified 2785
150 Ga0157380_10001611 3300014326 Bacteria 14871
151 Ga0157380_10002204 3300014326 Bacteria 13099
152 Ga0157377_10002511 3300014745 Bacteria 8128
153 Ga0157379_10009216 3300014968 Bacteria 8596
154 Ga0157376_10000885 3300014969 Bacteria 19631
155 Ga0157376_10007433 3300014969 Bacteria 7822
156 Ga0157376_10062575 3300014969 Unclassified 3132
157 Ga0157376_10173399 3300014969 Bacteria 1966
158 Ga0182005_1000023 3300015265 Bacteria 246328
159 Ga0163161_10004394 3300017792 Bacteria 9832
160 Ga0209436_101008 3300025208 Bacteria 10794
161 Ga0209436_102088 3300025208 Bacteria 6265
162 Ga0209258_100068 3300025242 Bacteria 286288
163 Ga0209646_1000003 3300025246 Bacteria 1160860
164 Ga0209026_1000362 3300025250 Bacteria 42398
165 Ga0209148_1000182 3300025254 Bacteria 123558
166 Ga0209673_1000194 3300025273 Bacteria 122640
167 Ga0209130_1002056 3300025284 Bacteria 10900
168 Ga0209564_1008897 3300025295 Bacteria 4875
169 Ga0209564_1017216 3300025295 Bacteria 2829
170 Ga0209564_1028007 3300025295 Bacteria 1814
171 Ga0209758_1010355 3300025297 Bacteria 5594
172 Ga0209758_1025083 3300025297 Bacteria 2628
173 Ga0209050_1000658 3300025298 Bacteria 53407
174 Ga0207426_1000051 3300025302 Bacteria 391700
175 Ga0207426_1000455 3300025302 Bacteria 64858
176 Ga0207426_1002176 3300025302 Bacteria 13256
177 Ga0209051_1043212 3300025303 Bacteria 1584
178 Ga0209257_1000025 3300025304 Bacteria 724838
179 Ga0209257_1001487 3300025304 Bacteria 27514
180 Ga0207680_10012430 3300025903 Bacteria 4334
181 Ga0207647_10024202 3300025904 Unclassified 4005
182 Ga0207695_10000327 3300025913 Bacteria 113436
183 Ga0207695_10000486 3300025913 Bacteria 84856
184 Ga0207695_10000681 3300025913 Bacteria 66668
185 Ga0207695_10008969 3300025913 Bacteria 12449
186 Ga0207695_10077271 3300025913 Bacteria 3382
187 Ga0207695_10086141 3300025913 Bacteria 3169
188 Ga0207695_10113431 3300025913 Unclassified 2687
189 Ga0207695_10289776 3300025913 Unclassified 1529
190 Ga0207695_10293735 3300025913 Unclassified 1517
191 Ga0207671_10001641 3300025914 Bacteria 25464
192 Ga0207671_10008816 3300025914 Bacteria 8495
193 Ga0207671_10015994 3300025914 Bacteria 5847
194 Ga0207660_10062223 3300025917 Bacteria 2688
195 Ga0207652_10001372 3300025921 Bacteria 21656
196 Ga0207652_10039470 3300025921 Bacteria 4006
197 Ga0207652_10206443 3300025921 Bacteria 1768
198 Ga0207694_10084390 3300025924 Unclassified 2498
199 Ga0207650_10116074 3300025925 Bacteria 2078
200 Ga0207659_10072001 3300025926 Bacteria 2525
201 Ga0207690_10062898 3300025932 Bacteria 2529
202 Ga0207706_10013284 3300025933 Bacteria 7490
203 Ga0207691_10007756 3300025940 Bacteria 10334
204 Ga0207689_10061487 3300025942 Bacteria 3088
205 Ga0207661_10009151 3300025944 Bacteria 7101
206 Ga0207661_10352088 3300025944 Unclassified 1329
207 Ga0207667_10000340 3300025949 Bacteria 63904
208 Ga0207667_10000352 3300025949 Bacteria 62572
209 Ga0207667_10011285 3300025949 Bacteria 10390
210 Ga0207651_10076928 3300025960 Bacteria 2387
211 Ga0207712_10017560 3300025961 Bacteria 4649
212 Ga0207712_10054369 3300025961 Bacteria 2812
213 Ga0207677_10048619 3300026023 Bacteria 2857
214 Ga0207639_10002892 3300026041 Bacteria 11542
215 Ga0207639_10358071 3300026041 Bacteria 1305
216 Ga0207702_10095961 3300026078 Unclassified 2607
217 Ga0207702_10190424 3300026078 Unclassified 1895
218 Ga0207648_10002286 3300026089 Bacteria 20689
219 Ga0207648_10072708 3300026089 Bacteria 2997
220 Ga0207674_10004027 3300026116 Bacteria 17831
221 Ga0207674_10025964 3300026116 Bacteria 6234
222 Ga0207674_10062367 3300026116 Bacteria 3765
223 Ga0207674_10081516 3300026116 Bacteria 3238
224 Ga0207674_10238797 3300026116 Bacteria 1764
225 Ga0207674_10456562 3300026116 Bacteria 1235
226 Ga0207675_100003516 3300026118 Bacteria 15294
227 Ga0207683_10103463 3300026121 Bacteria 2544
228 Ga0207698_10016053 3300026142 Bacteria 5037
229 Ga0268266_10000034 3300028379 Bacteria 354251
230 Ga0268264_10000117 3300028381 Bacteria 195037
231 Ga0268264_10012112 3300028381 Bacteria 7100
232 Ga0268264_10013913 3300028381 Bacteria 6614
233 Ga0307517_10005050 3300028786 Bacteria 20050
234 Ga0265324_10034221 3300029957 Bacteria 1770
235 Ga0307511_10006633 3300030521 Bacteria 11669
236 Ga0265327_10000137 3300031251 Bacteria 160704
237 Ga0307509_10063042 3300031507 Bacteria 3905
238 Ga0307516_10000749 3300031730 Bacteria 44209
239 Ga0307516_10034744 3300031730 Bacteria 5064
240 Ga0307411_10082181 3300032005 Bacteria 2221
241 Ga0307510_10027784 3300033180 Bacteria 6473
242 Ga0395899_0062977 3300037312 Bacteria 2730
243 Ga0395900_0002285 3300037418 Bacteria 21289
244 Ga0395900_0108597 3300037418 Bacteria 2850
245 Ga0395900_0114912 3300037418 Bacteria 2762
246 Ga0395901_0039795 3300038443 Bacteria 4866
247 Ga0439436_0003128 3300041404 Bacteria 5018
248 Ga0439439_0013465 3300041406 Bacteria 1982
249 Ga0439461_0005542 3300041410 Unclassified 2155
250 Ga0451800_1569662 3300041459 Bacteria 1077
251 Ga0439431_0009545 3300041997 Unclassified 2193
252 Ga0439441_002213 3300042001 Bacteria 2705
253 Ga0439443_017569 3300042003 Bacteria 1101
254 Ga0439445_0001084 3300042004 Bacteria 5814
255 Ga0439449_0021336 3300042007 Bacteria 2425
256 Ga0439449_0025824 3300042007 Unclassified 2194
257 Ga0439457_003208 3300042014 Bacteria 4492
258 Ga0439462_0000911 3300042015 Bacteria 6249
259 Ga0450894_002297 3300042131 Bacteria 2590
260 Ga0450898_008306 3300042134 Unclassified 1635
261 Ga0466972_0021852 3300044658 Bacteria 3187
262 Ga0466972_0061237 3300044658 Bacteria 1805
263 Ga0466964_0019613 3300044706 Bacteria 2601
264 Ga0466970_0121431 3300044765 Unclassified 1431
265 Ga0466957_0000811 3300044842 Bacteria 15941
266 Ga0466957_0003598 3300044842 Bacteria 8550
267 Ga0466959_0002430 3300045049 Bacteria 11904
268 Ga0495627_008425 3300046453 Bacteria 3867
269 Ga0495638_0051911 3300046460 Bacteria 2556
270 Ga0495648_0006092 3300046524 Bacteria 9892
271 Ga0495633_0000058 3300046558 Bacteria 147584
272 Ga0495668_0002355 3300046616 Bacteria 15721
273 Ga0495611_0002092 3300046648 Bacteria 9375
274 Ga0495672_0034445 3300047320 Bacteria 3129
275 Ga0495687_000079 3300047443 Bacteria 147704
276 Ga0495686_0000041 3300047472 Bacteria 297599
277 Ga0496101_0010216 3300048904 Bacteria 6195
278 Ga0496114_0000420 3300048917 Bacteria 31391
279 Ga0496121_0000343 3300048924 Bacteria 96972
280 Ga0496126_0010428 3300048929 Bacteria 9739
281 Ga0501032_0005429 3300049569 Bacteria 9471
282 Ga0501034_0001294 3300049571 Bacteria 33843
283 Ga0501036_0067127 3300049572 Bacteria 3034
284 Ga0501039_0039796 3300049575 Bacteria 3630
285 Ga0501043_0004347 3300049579 Bacteria 11527
286 Ga0501046_0107677 3300049580 Unclassified 2132
287 Ga0501047_0023491 3300049581 Bacteria 5918
288 Ga0501047_0042141 3300049581 Bacteria 4412
289 Ga0501048_0026380 3300049582 Bacteria 4230
290 Ga0501070_0037801 3300049586 Bacteria 4029
291 Ga0501074_0020734 3300049590 Bacteria 4774
292 Ga0501080_0016269 3300049742 Bacteria 6867
293 Ga0501083_0004219 3300049744 Bacteria 10121
294 Ga0501241_000214 3300049758 Bacteria 13135
295 Ga0501044_0024519 3300049823 Bacteria 6401
296 Ga0501044_0025339 3300049823 Bacteria 6286
297 Ga0501045_0070990 3300049824 Bacteria 2563
298 nmdc:mga05p37_537250_c1 3300050507 Bacteria 1334
299 nmdc:mga09592_10170_c1 3300050508 Bacteria 7657
300 nmdc:mga09592_52132_c1 3300050508 Unclassified 3453
301 nmdc:mga0qj67_47224_c1 3300050509 Unclassified 3401
302 nmdc:mga06r32_190960_c1 3300050510 Unclassified 2036
303 nmdc:mga08y16_218075_c1 3300050511 Bacteria 1975
304 Ga0500644_0000176 3300053088 Bacteria 40998
305 Ga0500646_0005968 3300053090 Bacteria 3089
306 Ga0500646_0006979 3300053090 Bacteria 2878
307 Ga0500583_0000004 3300053092 Bacteria 174723
308 Ga0500583_0000514 3300053092 Bacteria 11842
309 Ga0500583_0007027 3300053092 Bacteria 3926
310 Ga0500583_0146703 3300053092 Bacteria 1174
311 Ga0500569_000151 3300053109 Bacteria 11053
312 Ga0500642_0004041 3300053130 Bacteria 4531
313 Ga0500652_002822 3300053131 Bacteria 5243
314 Ga0500652_070558 3300053131 Bacteria 1447
315 Ga0500559_0014076 3300053136 Bacteria 3382
316 Ga0500577_0041269 3300053142 Bacteria 1682
317 Ga0500616_0007054 3300053153 Bacteria 7213
318 Ga0500622_0000258 3300053156 Bacteria 53957
319 Ga0500622_0000557 3300053156 Bacteria 34131
320 Ga0500636_0016069 3300053177 Bacteria 4410
321 Ga0501084_0096258 3300054114 Bacteria 2486
322 Ga0500661_002985 3300055283 Unclassified 3179

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009093 Ga0105240_10031115 Ga0105240_100311152 285
2 3300047320 Ga0495672_0034445 Ga0495672_0034445_482_1507 305
3 3300005366 Ga0070659_100020444 Ga0070659_1000204442 309
4 3300005530 Ga0070679_100128444 Ga0070679_1001284442 309
5 3300005563 Ga0068855_100008654 Ga0068855_1000086542 309
6 3300013102 Ga0157371_10000741 Ga0157371_1000074138 309
7 3300013104 Ga0157370_10000242 Ga0157370_1000024249 309
8 3300025932 Ga0207690_10062898 Ga0207690_100628983 309
9 3300025949 Ga0207667_10011285 Ga0207667_100112859 309
10 3300013307 Ga0157372_10016345 Ga0157372_100163457 310
11 3300053090 Ga0500646_0006979 Ga0500646_0006979_1132_2127 321
12 3300053109 Ga0500569_000151 Ga0500569_000151_4024_5019 321
13 3300053142 Ga0500577_0041269 Ga0500577_0041269_358_1353 321
14 3300053153 Ga0500616_0007054 Ga0500616_0007054_5043_6038 321
15 iso_pu_bacteria 2818991442 2819572501 327
16 iso_pu_bacteria 2818991460 2819680734 327
17 iso_pu_bacteria 2821136567 2821140108 327
18 iso_pu_bacteria 2883068021 2883073010 327
19 iso_pu_bacteria 2884791551 2884795474 327
20 iso_pu_bacteria 2896109856 2896113644 327
21 iso_pu_bacteria 2904467357 2904472230 327
22 iso_pu_bacteria 2929177148 2929178948 327
23 iso_pu_bacteria 2929239360 2929244941 327
24 iso_pu_bacteria 2929921140 2929927191 327
25 iso_pu_bacteria 2945977869 2945981354 327
26 iso_pu_bacteria 2946013367 2946019247 327
27 iso_pu_bacteria 8003151029 8003151067 327
28 3300042003 Ga0439443_017569 Ga0439443_017569_10_999 328
29 iso_pu_bacteria 2738541278 2738727545 328
30 3300031251 Ga0265327_10000137 Ga0265327_1000013722 330
31 3300048917 Ga0496114_0000420 Ga0496114_0000420_27756_28772 330
32 3300001979 JGI24740J21852_10000816 JGI24740J21852_1000081610 331
33 3300001989 JGI24739J22299_10001051 JGI24739J22299_100010513 331
34 3300002738 JGI25154J39366_1000047 JGI25154J39366_100004731 331
35 3300002741 JGI25157J39369_1006779 JGI25157J39369_10067792 331
36 3300003215 JGI25153J46596_10009659 JGI25153J46596_100096592 331
37 3300003316 rootH1_10038181 rootH1_100381814 331
38 3300003320 rootH2_10009422 rootH2_1000942210 331
39 3300003320 rootH2_10009424 rootH2_100094243 331
40 3300003320 rootH2_10240640 rootH2_102406402 331
41 3300003322 rootL2_10133707 rootL2_101337071 331
42 3300003323 rootH1_10068438 rootH1_100684383 331
43 3300003354 JGI25160J50197_1006253 JGI25160J50197_10062532 331
44 3300003354 JGI25160J50197_1007207 JGI25160J50197_10072072 331
45 3300003354 JGI25160J50197_1008452 JGI25160J50197_10084524 331
46 3300003761 Ga0055535_1002140 Ga0055535_10021403 331
47 3300003762 Ga0055542_1017013 Ga0055542_10170131 331
48 3300003790 Ga0055528_1000904 Ga0055528_100090415 331
49 3300003791 Ga0055530_10000546 Ga0055530_1000054627 331
50 3300003794 Ga0055531_10000245 Ga0055531_1000024517 331
51 3300005262 Ga0065165_1000725 Ga0065165_100072534 331
52 3300005262 Ga0065165_1021547 Ga0065165_10215472 331
53 3300005544 Ga0070686_100040228 Ga0070686_1000402284 331
54 3300006353 Ga0075370_10162264 Ga0075370_101622642 331
55 3300006358 Ga0068871_100094683 Ga0068871_1000946833 331
56 3300010375 Ga0105239_10094636 Ga0105239_100946362 331
57 3300013102 Ga0157371_10003413 Ga0157371_1000341312 331
58 3300013306 Ga0163162_10062079 Ga0163162_100620792 331
59 3300015265 Ga0182005_1000023 Ga0182005_100002367 331
60 3300025208 Ga0209436_101008 Ga0209436_1010088 331
61 3300025208 Ga0209436_102088 Ga0209436_1020886 331
62 3300025242 Ga0209258_100068 Ga0209258_100068150 331
63 3300025246 Ga0209646_1000003 Ga0209646_1000003817 331
64 3300025250 Ga0209026_1000362 Ga0209026_100036239 331
65 3300025254 Ga0209148_1000182 Ga0209148_100018284 331
66 3300025273 Ga0209673_1000194 Ga0209673_100019464 331
67 3300025284 Ga0209130_1002056 Ga0209130_10020566 331
68 3300025295 Ga0209564_1008897 Ga0209564_10088975 331
69 3300025295 Ga0209564_1017216 Ga0209564_10172162 331
70 3300025295 Ga0209564_1028007 Ga0209564_10280071 331
71 3300025297 Ga0209758_1010355 Ga0209758_10103554 331
72 3300025297 Ga0209758_1025083 Ga0209758_10250832 331
73 3300025298 Ga0209050_1000658 Ga0209050_100065839 331
74 3300025302 Ga0207426_1000051 Ga0207426_1000051190 331
75 3300025302 Ga0207426_1000455 Ga0207426_100045546 331
76 3300025302 Ga0207426_1002176 Ga0207426_10021768 331
77 3300025303 Ga0209051_1043212 Ga0209051_10432122 331
78 3300025304 Ga0209257_1000025 Ga0209257_1000025456 331
79 3300025304 Ga0209257_1001487 Ga0209257_100148719 331
80 3300026116 Ga0207674_10238797 Ga0207674_102387973 331
81 3300029957 Ga0265324_10034221 Ga0265324_100342212 331
82 3300042004 Ga0439445_0001084 Ga0439445_0001084_2253_3251 331
83 3300044658 Ga0466972_0061237 Ga0466972_0061237_32_1027 331
84 3300046453 Ga0495627_008425 Ga0495627_008425_783_1778 331
85 3300046558 Ga0495633_0000058 Ga0495633_0000058_12519_13514 331
86 3300048924 Ga0496121_0000343 Ga0496121_0000343_17256_18251 331
87 3300048929 Ga0496126_0010428 Ga0496126_0010428_3786_4781 331
88 3300049758 Ga0501241_000214 Ga0501241_000214_1314_2309 331
89 3300053088 Ga0500644_0000176 Ga0500644_0000176_3615_4610 331
90 3300053092 Ga0500583_0007027 Ga0500583_0007027_2655_3650 331
91 3300053131 Ga0500652_002822 Ga0500652_002822_1716_2711 331
92 3300053136 Ga0500559_0014076 Ga0500559_0014076_125_1120 331
93 3300053156 Ga0500622_0000258 Ga0500622_0000258_12631_13626 331
94 3300053177 Ga0500636_0016069 Ga0500636_0016069_2952_3947 331
95 3300055283 Ga0500661_002985 Ga0500661_002985_601_1596 331
96 2162886011 MRS1b_contig_6871790 MRS1b_0731.00000290 332
97 2162886012 MBSR1b_contig_8539638 MBSR1b_0778.00007730 332
98 3300003320 rootH2_10013617 rootH2_100136175 332
99 3300003320 rootH2_10069037 rootH2_100690371 332
100 3300003320 rootH2_10143187 rootH2_101431871 332
101 3300003320 rootH2_10144348 rootH2_101443481 332
102 3300005290 Ga0065712_10008267 Ga0065712_100082672 332
103 3300005293 Ga0065715_10127794 Ga0065715_101277942 332
104 3300005295 Ga0065707_10156157 Ga0065707_101561571 332
105 3300005328 Ga0070676_10084887 Ga0070676_100848872 332
106 3300005329 Ga0070683_100002349 Ga0070683_1000023492 332
107 3300005331 Ga0070670_100011373 Ga0070670_1000113736 332
108 3300005331 Ga0070670_100037886 Ga0070670_1000378862 332
109 3300005334 Ga0068869_100022268 Ga0068869_1000222682 332
110 3300005334 Ga0068869_100080095 Ga0068869_1000800952 332
111 3300005335 Ga0070666_10007569 Ga0070666_100075692 332
112 3300005338 Ga0068868_100265412 Ga0068868_1002654122 332
113 3300005339 Ga0070660_100167913 Ga0070660_1001679132 332
114 3300005340 Ga0070689_100053077 Ga0070689_1000530773 332
115 3300005341 Ga0070691_10028221 Ga0070691_100282212 332
116 3300005345 Ga0070692_10227068 Ga0070692_102270681 332
117 3300005354 Ga0070675_100004073 Ga0070675_1000040733 332
118 3300005355 Ga0070671_100012652 Ga0070671_1000126522 332
119 3300005364 Ga0070673_100084135 Ga0070673_1000841352 332
120 3300005365 Ga0070688_100001664 Ga0070688_1000016649 332
121 3300005367 Ga0070667_100005481 Ga0070667_1000054817 332
122 3300005456 Ga0070678_100086190 Ga0070678_1000861903 332
123 3300005457 Ga0070662_100006736 Ga0070662_1000067362 332
124 3300005458 Ga0070681_10151190 Ga0070681_101511902 332
125 3300005459 Ga0068867_100027826 Ga0068867_1000278265 332
126 3300005459 Ga0068867_100089089 Ga0068867_1000890893 332
127 3300005471 Ga0070698_100015364 Ga0070698_1000153647 332
128 3300005530 Ga0070679_100004103 Ga0070679_1000041032 332
129 3300005535 Ga0070684_100022746 Ga0070684_1000227463 332
130 3300005539 Ga0068853_100000201 Ga0068853_10000020130 332
131 3300005539 Ga0068853_100426741 Ga0068853_1004267411 332
132 3300005543 Ga0070672_100014038 Ga0070672_1000140385 332
133 3300005548 Ga0070665_100000016 Ga0070665_100000016347 332
134 3300005563 Ga0068855_100002958 Ga0068855_1000029589 332
135 3300005564 Ga0070664_100065749 Ga0070664_1000657492 332
136 3300005577 Ga0068857_100009218 Ga0068857_1000092183 332
137 3300005577 Ga0068857_100065379 Ga0068857_1000653793 332
138 3300005577 Ga0068857_100364409 Ga0068857_1003644091 332
139 3300005578 Ga0068854_100058070 Ga0068854_1000580703 332
140 3300005614 Ga0068856_100073117 Ga0068856_1000731172 332
141 3300005614 Ga0068856_100076945 Ga0068856_1000769453 332
142 3300005616 Ga0068852_100002349 Ga0068852_1000023492 332
143 3300005617 Ga0068859_100181176 Ga0068859_1001811763 332
144 3300005719 Ga0068861_100001097 Ga0068861_1000010979 332
145 3300005843 Ga0068860_100000026 Ga0068860_10000002641 332
146 3300005843 Ga0068860_100004401 Ga0068860_1000044014 332
147 3300005843 Ga0068860_100005412 Ga0068860_1000054129 332
148 3300005844 Ga0068862_100011567 Ga0068862_1000115675 332
149 3300006195 Ga0075366_10074650 Ga0075366_100746501 332
150 3300006237 Ga0097621_100000027 Ga0097621_10000002717 332
151 3300006358 Ga0068871_100000107 Ga0068871_10000010725 332
152 3300006844 Ga0075428_100011686 Ga0075428_1000116869 332
153 3300006846 Ga0075430_100010761 Ga0075430_1000107612 332
154 3300006847 Ga0075431_100098990 Ga0075431_1000989902 332
155 3300006847 Ga0075431_100285036 Ga0075431_1002850362 332
156 3300006880 Ga0075429_100004950 Ga0075429_1000049505 332
157 3300006880 Ga0075429_100033563 Ga0075429_1000335633 332
158 3300006931 Ga0097620_100181184 Ga0097620_1001811843 332
159 3300009093 Ga0105240_10000258 Ga0105240_100002586 332
160 3300009093 Ga0105240_10000715 Ga0105240_1000071515 332
161 3300009093 Ga0105240_10001801 Ga0105240_1000180110 332
162 3300009093 Ga0105240_10003107 Ga0105240_1000310721 332
163 3300009093 Ga0105240_10058973 Ga0105240_100589733 332
164 3300009093 Ga0105240_10065724 Ga0105240_100657242 332
165 3300009093 Ga0105240_10065737 Ga0105240_100657373 332
166 3300009093 Ga0105240_10370142 Ga0105240_103701422 332
167 3300009093 Ga0105240_10455022 Ga0105240_104550222 332
168 3300009094 Ga0111539_10005231 Ga0111539_1000523113 332
169 3300009147 Ga0114129_10073348 Ga0114129_100733483 332
170 3300009147 Ga0114129_10337549 Ga0114129_103375492 332
171 3300009174 Ga0105241_10000955 Ga0105241_100009554 332
172 3300009174 Ga0105241_10138461 Ga0105241_101384611 332
173 3300009176 Ga0105242_10063027 Ga0105242_100630272 332
174 3300009545 Ga0105237_10003306 Ga0105237_1000330613 332
175 3300009545 Ga0105237_10006269 Ga0105237_1000626914 332
176 3300009545 Ga0105237_10014376 Ga0105237_100143762 332
177 3300009545 Ga0105237_10041333 Ga0105237_100413333 332
178 3300009551 Ga0105238_10002148 Ga0105238_100021482 332
179 3300009551 Ga0105238_10108388 Ga0105238_101083882 332
180 3300009553 Ga0105249_10007683 Ga0105249_100076834 332
181 3300010375 Ga0105239_10000591 Ga0105239_1000059136 332
182 3300010375 Ga0105239_10001037 Ga0105239_100010372 332
183 3300010375 Ga0105239_10006683 Ga0105239_100066838 332
184 3300010375 Ga0105239_10017967 Ga0105239_100179672 332
185 3300010375 Ga0105239_10030489 Ga0105239_100304894 332
186 3300013100 Ga0157373_10016571 Ga0157373_100165715 332
187 3300013100 Ga0157373_10019702 Ga0157373_100197023 332
188 3300013100 Ga0157373_10122222 Ga0157373_101222221 332
189 3300013102 Ga0157371_10003291 Ga0157371_100032914 332
190 3300013102 Ga0157371_10007516 Ga0157371_100075164 332
191 3300013104 Ga0157370_10007033 Ga0157370_100070339 332
192 3300013104 Ga0157370_10007210 Ga0157370_100072106 332
193 3300013104 Ga0157370_10034872 Ga0157370_100348723 332
194 3300013104 Ga0157370_10079275 Ga0157370_100792754 332
195 3300013105 Ga0157369_10021531 Ga0157369_100215312 332
196 3300013105 Ga0157369_10034266 Ga0157369_100342663 332
197 3300013296 Ga0157374_10000002 Ga0157374_10000002827 332
198 3300013297 Ga0157378_10040240 Ga0157378_100402402 332
199 3300013306 Ga0163162_10002356 Ga0163162_1000235613 332
200 3300013306 Ga0163162_10004559 Ga0163162_1000455912 332
201 3300013306 Ga0163162_10005116 Ga0163162_100051162 332
202 3300013306 Ga0163162_10005339 Ga0163162_100053394 332
203 3300013306 Ga0163162_10130789 Ga0163162_101307893 332
204 3300013307 Ga0157372_10000618 Ga0157372_1000061822 332
205 3300013307 Ga0157372_10000666 Ga0157372_1000066618 332
206 3300013307 Ga0157372_10125004 Ga0157372_101250043 332
207 3300013308 Ga0157375_10000336 Ga0157375_1000033611 332
208 3300014325 Ga0163163_10085000 Ga0163163_100850003 332
209 3300014325 Ga0163163_10109841 Ga0163163_101098413 332
210 3300014326 Ga0157380_10001611 Ga0157380_100016112 332
211 3300014326 Ga0157380_10002204 Ga0157380_1000220410 332
212 3300014745 Ga0157377_10002511 Ga0157377_100025115 332
213 3300014968 Ga0157379_10009216 Ga0157379_100092163 332
214 3300014969 Ga0157376_10000885 Ga0157376_100008856 332
215 3300014969 Ga0157376_10007433 Ga0157376_100074336 332
216 3300014969 Ga0157376_10062575 Ga0157376_100625753 332
217 3300014969 Ga0157376_10173399 Ga0157376_101733991 332
218 3300017792 Ga0163161_10004394 Ga0163161_100043944 332
219 3300025903 Ga0207680_10012430 Ga0207680_100124303 332
220 3300025904 Ga0207647_10024202 Ga0207647_100242023 332
221 3300025913 Ga0207695_10000327 Ga0207695_1000032751 332
222 3300025913 Ga0207695_10000486 Ga0207695_1000048645 332
223 3300025913 Ga0207695_10000681 Ga0207695_1000068110 332
224 3300025913 Ga0207695_10008969 Ga0207695_100089696 332
225 3300025913 Ga0207695_10077271 Ga0207695_100772713 332
226 3300025913 Ga0207695_10086141 Ga0207695_100861412 332
227 3300025913 Ga0207695_10113431 Ga0207695_101134312 332
228 3300025913 Ga0207695_10289776 Ga0207695_102897762 332
229 3300025913 Ga0207695_10293735 Ga0207695_102937351 332
230 3300025914 Ga0207671_10001641 Ga0207671_1000164112 332
231 3300025914 Ga0207671_10008816 Ga0207671_100088163 332
232 3300025914 Ga0207671_10015994 Ga0207671_100159943 332
233 3300025917 Ga0207660_10062223 Ga0207660_100622233 332
234 3300025921 Ga0207652_10001372 Ga0207652_100013722 332
235 3300025921 Ga0207652_10039470 Ga0207652_100394704 332
236 3300025921 Ga0207652_10206443 Ga0207652_102064432 332
237 3300025924 Ga0207694_10084390 Ga0207694_100843902 332
238 3300025925 Ga0207650_10116074 Ga0207650_101160741 332
239 3300025926 Ga0207659_10072001 Ga0207659_100720013 332
240 3300025933 Ga0207706_10013284 Ga0207706_100132841 332
241 3300025940 Ga0207691_10007756 Ga0207691_100077566 332
242 3300025942 Ga0207689_10061487 Ga0207689_100614872 332
243 3300025944 Ga0207661_10009151 Ga0207661_100091513 332
244 3300025944 Ga0207661_10352088 Ga0207661_103520882 332
245 3300025949 Ga0207667_10000340 Ga0207667_1000034012 332
246 3300025949 Ga0207667_10000352 Ga0207667_1000035225 332
247 3300025960 Ga0207651_10076928 Ga0207651_100769282 332
248 3300025961 Ga0207712_10017560 Ga0207712_100175605 332
249 3300025961 Ga0207712_10054369 Ga0207712_100543693 332
250 3300026023 Ga0207677_10048619 Ga0207677_100486192 332
251 3300026041 Ga0207639_10002892 Ga0207639_1000289212 332
252 3300026041 Ga0207639_10358071 Ga0207639_103580711 332
253 3300026078 Ga0207702_10095961 Ga0207702_100959611 332
254 3300026078 Ga0207702_10190424 Ga0207702_101904242 332
255 3300026089 Ga0207648_10002286 Ga0207648_1000228613 332
256 3300026089 Ga0207648_10072708 Ga0207648_100727083 332
257 3300026116 Ga0207674_10004027 Ga0207674_1000402711 332
258 3300026116 Ga0207674_10025964 Ga0207674_100259645 332
259 3300026116 Ga0207674_10062367 Ga0207674_100623674 332
260 3300026116 Ga0207674_10081516 Ga0207674_100815162 332
261 3300026116 Ga0207674_10456562 Ga0207674_104565621 332
262 3300026118 Ga0207675_100003516 Ga0207675_1000035168 332
263 3300026121 Ga0207683_10103463 Ga0207683_101034632 332
264 3300026142 Ga0207698_10016053 Ga0207698_100160533 332
265 3300028379 Ga0268266_10000034 Ga0268266_10000034214 332
266 3300028381 Ga0268264_10000117 Ga0268264_1000011717 332
267 3300028381 Ga0268264_10012112 Ga0268264_100121123 332
268 3300028381 Ga0268264_10013913 Ga0268264_100139133 332
269 3300028786 Ga0307517_10005050 Ga0307517_100050503 332
270 3300030521 Ga0307511_10006633 Ga0307511_100066335 332
271 3300031507 Ga0307509_10063042 Ga0307509_100630422 332
272 3300031730 Ga0307516_10000749 Ga0307516_1000074912 332
273 3300031730 Ga0307516_10034744 Ga0307516_100347442 332
274 3300032005 Ga0307411_10082181 Ga0307411_100821812 332
275 3300033180 Ga0307510_10027784 Ga0307510_100277842 332
276 3300037312 Ga0395899_0062977 Ga0395899_0062977_610_1626 332
277 3300037418 Ga0395900_0002285 Ga0395900_0002285_11356_12372 332
278 3300037418 Ga0395900_0108597 Ga0395900_0108597_1024_2064 332
279 3300037418 Ga0395900_0114912 Ga0395900_0114912_435_1451 332
280 3300038443 Ga0395901_0039795 Ga0395901_0039795_1616_2632 332
281 3300041404 Ga0439436_0003128 Ga0439436_0003128_2561_3559 332
282 3300041406 Ga0439439_0013465 Ga0439439_0013465_355_1353 332
283 3300041410 Ga0439461_0005542 Ga0439461_0005542_44_1042 332
284 3300041459 Ga0451800_1569662 Ga0451800_1569662_46_1044 332
285 3300041997 Ga0439431_0009545 Ga0439431_0009545_1121_2119 332
286 3300042001 Ga0439441_002213 Ga0439441_002213_1092_2093 332
287 3300042007 Ga0439449_0021336 Ga0439449_0021336_172_1170 332
288 3300042007 Ga0439449_0025824 Ga0439449_0025824_552_1550 332
289 3300042014 Ga0439457_003208 Ga0439457_003208_1626_2624 332
290 3300042015 Ga0439462_0000911 Ga0439462_0000911_2890_3888 332
291 3300042131 Ga0450894_002297 Ga0450894_002297_989_1987 332
292 3300042134 Ga0450898_008306 Ga0450898_008306_590_1588 332
293 3300044658 Ga0466972_0021852 Ga0466972_0021852_1461_2462 332
294 3300044706 Ga0466964_0019613 Ga0466964_0019613_1059_2057 332
295 3300044765 Ga0466970_0121431 Ga0466970_0121431_244_1242 332
296 3300044842 Ga0466957_0000811 Ga0466957_0000811_5336_6334 332
297 3300044842 Ga0466957_0003598 Ga0466957_0003598_3369_4367 332
298 3300045049 Ga0466959_0002430 Ga0466959_0002430_1190_2188 332
299 3300046460 Ga0495638_0051911 Ga0495638_0051911_1184_2182 332
300 3300046524 Ga0495648_0006092 Ga0495648_0006092_3757_4755 332
301 3300046616 Ga0495668_0002355 Ga0495668_0002355_7619_8620 332
302 3300046648 Ga0495611_0002092 Ga0495611_0002092_7245_8243 332
303 3300047443 Ga0495687_000079 Ga0495687_000079_52414_53412 332
304 3300047472 Ga0495686_0000041 Ga0495686_0000041_132490_133488 332
305 3300048904 Ga0496101_0010216 Ga0496101_0010216_4340_5341 332
306 3300049569 Ga0501032_0005429 Ga0501032_0005429_539_1537 332
307 3300049571 Ga0501034_0001294 Ga0501034_0001294_31524_32522 332
308 3300049572 Ga0501036_0067127 Ga0501036_0067127_1741_2739 332
309 3300049575 Ga0501039_0039796 Ga0501039_0039796_1226_2224 332
310 3300049579 Ga0501043_0004347 Ga0501043_0004347_3772_4770 332
311 3300049580 Ga0501046_0107677 Ga0501046_0107677_966_1964 332
312 3300049581 Ga0501047_0023491 Ga0501047_0023491_1952_2950 332
313 3300049581 Ga0501047_0042141 Ga0501047_0042141_1416_2414 332
314 3300049582 Ga0501048_0026380 Ga0501048_0026380_1774_2772 332
315 3300049586 Ga0501070_0037801 Ga0501070_0037801_2322_3320 332
316 3300049590 Ga0501074_0020734 Ga0501074_0020734_688_1686 332
317 3300049742 Ga0501080_0016269 Ga0501080_0016269_5424_6422 332
318 3300049744 Ga0501083_0004219 Ga0501083_0004219_6958_7956 332
319 3300049823 Ga0501044_0024519 Ga0501044_0024519_509_1507 332
320 3300049823 Ga0501044_0025339 Ga0501044_0025339_4278_5276 332
321 3300049824 Ga0501045_0070990 Ga0501045_0070990_775_1773 332
322 3300050507 nmdc:mga05p37_537250_c1 nmdc:mga05p37_537250_c1_29_1030 332
323 3300050508 nmdc:mga09592_10170_c1 nmdc:mga09592_10170_c1_1262_2263 332
324 3300050508 nmdc:mga09592_52132_c1 nmdc:mga09592_52132_c1_353_1357 332
325 3300050509 nmdc:mga0qj67_47224_c1 nmdc:mga0qj67_47224_c1_89_1093 332
326 3300050510 nmdc:mga06r32_190960_c1 nmdc:mga06r32_190960_c1_803_1807 332
327 3300050511 nmdc:mga08y16_218075_c1 nmdc:mga08y16_218075_c1_538_1536 332
328 3300053090 Ga0500646_0005968 Ga0500646_0005968_566_1564 332
329 3300053092 Ga0500583_0000004 Ga0500583_0000004_107283_108284 332
330 3300053092 Ga0500583_0000514 Ga0500583_0000514_5727_6725 332
331 3300053092 Ga0500583_0146703 Ga0500583_0146703_143_1147 332
332 3300053130 Ga0500642_0004041 Ga0500642_0004041_2793_3791 332
333 3300053131 Ga0500652_070558 Ga0500652_070558_332_1330 332
334 3300053156 Ga0500622_0000557 Ga0500622_0000557_21282_22280 332
335 3300054114 Ga0501084_0096258 Ga0501084_0096258_1357_2355 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06144

DNA_pol3_delta

DNA polymerase III, delta subunit

42

158

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pfo-assembly1.cif.gz_A core human replisome 0.7345 137 203
1jql-assembly1.cif.gz_B mechanism of processivity clamp opening by the delta subunit wrench of the clamp loader complex of e. coli dna polymerase iii: structure of beta-delta (1-140) 0.6244 1 133
2uz3-assembly1.cif.gz_A crystal structure of thymidine kinase with dttp from u. urealyticum 0.6195 15 135
3glg-assembly2.cif.gz_H crystal structure of a mutant (gammat157a) e. coli clamp loader bound to primer-template dna 0.6191 2 330
3bos-assembly1.cif.gz_B crystal structure of a putative dna replication regulator hda (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution 0.6147 2 204
ID Description Score Start End Superfamily
1jqjC03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9347 138 202 1.10.8.60
1jr3D03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9131 138 203 1.10.8.60
3zh9B02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9115 136 202 1.10.8.60
af_O96260_176_233_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8992 143 201 1.10.8.60
af_F4KEM0_516_577_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.898 142 203 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A259HGW8-F1-model_v4 DNA polymerase III subunit delta 0.9794 1 190 GO:0003677
GO:0003887
GO:0006261
GO:0009360
AF-A0A090WXT3-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9671 155 332 GO:0003677
GO:0003887
GO:0006261
GO:0009360
AF-A0A5J4PWJ3-F1-model_v4 DNA polymerase III subunit delta 0.965 1 136 GO:0003677
GO:0003887
GO:0006261
GO:0009360
AF-A0A259HGW8-F1-model_v4 DNA polymerase III subunit delta 0.9644 1 190 GO:0003677
GO:0003887
GO:0006261
GO:0009360
AF-A0A7C3CCC5-F1-model_v4 DNA polymerase III subunit delta 0.9617 1 149 GO:0003677
GO:0003887
GO:0006261
GO:0009360

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pLDDT pTM Quality
91.64 0.74 High
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Predicted Structure (AlphaFold2)

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