F412192

General Info

Members Datasets Scaffolds Average Seq Length
335 172 670 349

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100144836|Ga0075428_1001448363
Length 390
Sequence MAQARPTHAGRLASDWTTPATSLGRSARSFAERRPALAEPAERARRVTISDIAEQAGVSKGAVSYALNGRPGVSDGTRERILEIARELGWYPNRAARALSVERADACGLVLARPAKTIALEPFFMEFIAGVESELSARSIALSIQLVESVEDEIEVYRRWWGERRVDGVLMVDLREDDPRVRELVRLGLPAVVIGGPVENGALPAVWHDEAGVVIEAVRYVAALGHTRIARVAGVGEFVHTAQRTEGFLSATEELGLDAEIIATDYSAESGARATRKLLSSPQPPSAIIYDSDLLAVTGLGVALQMGFAVPDEVSIIGWDDSLISQVVHPPLTAITRDIVAYGGTAIRHLLEVIEGRTVEDKETLRGELTPRGSTGPARQGAGLPGVRRR

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
15 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
45 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
48 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
51 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
54 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
59 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
60 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
64 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
65 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
72 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
80 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
81 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
88 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
89 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
92 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
93 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
96 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
97 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
98 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
102 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
120 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
136 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
148 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
149 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
150 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
151 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
152 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
155 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
156 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
160 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
161 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
162 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
163 2558860280 Kutzneria sp. 744 Isolate Unclassified
164 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
165 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
166 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
167 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
168 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
169 2862574272 Streptomyces sp. AcE210 Isolate Nodule
170 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
171 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
172 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.12
Metatranscriptomes 0
Isolates 3.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.78
Nodule 0.3
Rhizoplane 2.99
Rhizosphere 89.85
Stem 0
Stem Tuber 0
Unclassified 0.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100144836 3300006844 Bacteria 2582
2 JGI25406J46586_10011009 3300003203 Bacteria 3980
3 Ga0070670_100000779 3300005331 Bacteria 24797
4 Ga0070675_100184214 3300005354 Unclassified 1806
5 Ga0070714_100002301 3300005435 Bacteria 14052
6 Ga0070708_100099051 3300005445 Bacteria 2666
7 Ga0070678_100222655 3300005456 Bacteria 1569
8 Ga0070662_100207024 3300005457 Bacteria 1559
9 Ga0070699_100023387 3300005518 Bacteria 5322
10 Ga0070679_100033981 3300005530 Bacteria 5052
11 Ga0070684_100013791 3300005535 Bacteria 6524
12 Ga0068855_100433752 3300005563 Bacteria 1436
13 Ga0070664_100094464 3300005564 Bacteria 2593
14 Ga0068854_100029822 3300005578 Bacteria 3780
15 Ga0068870_10000391 3300005840 Bacteria 16494
16 Ga0081455_10010944 3300005937 Bacteria 9146
17 Ga0081455_10020378 3300005937 Bacteria 6245
18 Ga0081455_10025035 3300005937 Bacteria 5515
19 Ga0081455_10035709 3300005937 Bacteria 4438
20 Ga0081455_10159187 3300005937 Bacteria 1733
21 Ga0081538_10011237 3300005981 Bacteria 7267
22 Ga0081538_10080278 3300005981 Bacteria 1741
23 Ga0081539_10005668 3300005985 Bacteria 12537
24 Ga0070717_10161620 3300006028 Bacteria 1943
25 Ga0075365_10002270 3300006038 Bacteria 9328
26 Ga0075365_10072318 3300006038 Bacteria 2323
27 Ga0075364_10095875 3300006051 Bacteria 1972
28 Ga0075432_10002943 3300006058 Bacteria 5734
29 Ga0075428_100005259 3300006844 Bacteria 14392
30 Ga0075430_100000347 3300006846 Bacteria 33575
31 Ga0075430_100005525 3300006846 Bacteria 10681
32 Ga0075430_100097378 3300006846 Bacteria 2458
33 Ga0075431_100001622 3300006847 Bacteria 21012
34 Ga0075431_100033707 3300006847 Bacteria 5277
35 Ga0075431_100154618 3300006847 Bacteria 2360
36 Ga0075433_10000155 3300006852 Bacteria 36857
37 Ga0075434_100003337 3300006871 Bacteria 14365
38 Ga0075429_100017784 3300006880 Bacteria 6148
39 Ga0075429_100163692 3300006880 Bacteria 1948
40 Ga0075429_100427573 3300006880 Bacteria 1160
41 Ga0075435_100012474 3300007076 Bacteria 6297
42 Ga0111539_10056021 3300009094 Bacteria 4687
43 Ga0111539_10068493 3300009094 Bacteria 4190
44 Ga0111539_10276340 3300009094 Bacteria 1955
45 Ga0114129_10000658 3300009147 Bacteria 43240
46 Ga0114129_10112101 3300009147 Bacteria 3762
47 Ga0114129_10298592 3300009147 Bacteria 2148
48 Ga0114129_10516064 3300009147 Bacteria 1559
49 Ga0105243_10189506 3300009148 Bacteria 1795
50 Ga0105242_10062817 3300009176 Bacteria 3057
51 Ga0105238_10021360 3300009551 Bacteria 6595
52 Ga0105239_10035923 3300010375 Bacteria 5440
53 Ga0105246_10005838 3300011119 Bacteria 7506
54 Ga0157372_10149044 3300013307 Bacteria 2699
55 Ga0157375_10246843 3300013308 Bacteria 1946
56 Ga0157380_10015979 3300014326 Bacteria 5526
57 Ga0207688_10132568 3300025901 Bacteria 1461
58 Ga0207694_10017551 3300025924 Bacteria 5410
59 Ga0207664_10007984 3300025929 Bacteria 7359
60 Ga0207648_10237458 3300026089 Bacteria 1622
61 Ga0207428_10001118 3300027907 Bacteria 29177
62 Ga0207428_10011819 3300027907 Bacteria 7695
63 Ga0265319_1000528 3300028563 Bacteria 26190
64 Ga0265319_1005802 3300028563 Bacteria 5833
65 Ga0265319_1027963 3300028563 Bacteria 1993
66 Ga0265334_10001606 3300028573 Bacteria 10860
67 Ga0265318_10001202 3300028577 Bacteria 15789
68 Ga0265318_10001208 3300028577 Bacteria 15708
69 Ga0265336_10013690 3300028666 Bacteria 2700
70 Ga0307517_10010766 3300028786 Bacteria 12751
71 Ga0265338_10066013 3300028800 Bacteria 3134
72 Ga0265330_10003534 3300031235 Bacteria 8143
73 Ga0265332_10007255 3300031238 Bacteria 5017
74 Ga0265320_10016777 3300031240 Bacteria 4090
75 Ga0265320_10037095 3300031240 Bacteria 2457
76 Ga0265325_10001441 3300031241 Bacteria 16715
77 Ga0265325_10011727 3300031241 Bacteria 5028
78 Ga0265325_10017485 3300031241 Bacteria 3983
79 Ga0265329_10005067 3300031242 Bacteria 5377
80 Ga0265340_10001472 3300031247 Bacteria 13493
81 Ga0265340_10011264 3300031247 Bacteria 4760
82 Ga0265339_10005133 3300031249 Bacteria 8783
83 Ga0265331_10003702 3300031250 Bacteria 9725
84 Ga0265327_10010667 3300031251 Bacteria 6425
85 Ga0265327_10039206 3300031251 Bacteria 2575
86 Ga0265316_10003389 3300031344 Bacteria 16137
87 Ga0265316_10011630 3300031344 Bacteria 7924
88 Ga0265313_10002701 3300031595 Bacteria 15021
89 Ga0307508_10158694 3300031616 Bacteria 1865
90 Ga0265314_10017608 3300031711 Bacteria 5601
91 Ga0265342_10020259 3300031712 Bacteria 4271
92 Ga0316583_10023302 3300032133 Bacteria 2213
93 Ga0373925_0277187 3300037068 Bacteria 1350
94 Ga0395899_0005470 3300037312 Bacteria 9851
95 Ga0395900_0005824 3300037418 Bacteria 12875
96 Ga0395900_0083208 3300037418 Bacteria 3288
97 Ga0395900_0180072 3300037418 Bacteria 2148
98 Ga0395898_0016631 3300037466 Bacteria 7518
99 Ga0395898_0032278 3300037466 Bacteria 5226
100 Ga0395898_0088845 3300037466 Bacteria 2974
101 Ga0395905_0008991 3300037471 Bacteria 9802
102 Ga0395905_0020837 3300037471 Bacteria 6208
103 Ga0395905_0235748 3300037471 Bacteria 1710
104 Ga0395901_0034479 3300038443 Bacteria 5226
105 Ga0395901_0046948 3300038443 Bacteria 4486
106 Ga0466969_0003673 3300044656 Bacteria 8169
107 Ga0466966_0005895 3300044684 Bacteria 8082
108 Ga0466961_0002227 3300044693 Bacteria 12077
109 Ga0466970_0134462 3300044765 Bacteria 1360
110 Ga0466967_0024770 3300045976 Bacteria 4939
111 Ga0495603_0003048 3300046455 Bacteria 9936
112 Ga0495603_0029899 3300046455 Bacteria 3283
113 Ga0495629_0072933 3300046459 Bacteria 2397
114 Ga0495638_0059019 3300046460 Bacteria 2377
115 Ga0495641_0008211 3300046461 Bacteria 6400
116 Ga0495585_0090146 3300046492 Bacteria 1652
117 Ga0495606_0012430 3300046507 Bacteria 6825
118 Ga0495630_0015054 3300046517 Bacteria 5643
119 Ga0495643_0004012 3300046522 Bacteria 10516
120 Ga0495640_0028651 3300046533 Bacteria 4007
121 Ga0495633_0084342 3300046558 Bacteria 1478
122 Ga0495668_0007699 3300046616 Bacteria 6846
123 Ga0495611_0040534 3300046648 Bacteria 2077
124 Ga0495625_0006256 3300046660 Bacteria 10660
125 Ga0495635_0028144 3300046663 Bacteria 3906
126 Ga0495613_0020876 3300046689 Bacteria 4882
127 Ga0495624_0018693 3300046690 Bacteria 4633
128 Ga0495589_0049846 3300046794 Bacteria 2072
129 Ga0495676_0007989 3300047321 Bacteria 9699
130 Ga0495676_0014927 3300047321 Bacteria 6935
131 Ga0495680_0027635 3300047322 Bacteria 4658
132 Ga0495680_0044505 3300047322 Bacteria 3510
133 Ga0495680_0092231 3300047322 Bacteria 2269
134 Ga0495687_018527 3300047443 Bacteria 3440
135 Ga0495685_000796 3300047447 Bacteria 9661
136 Ga0495685_003377 3300047447 Bacteria 5092
137 Ga0495681_0005350 3300047470 Bacteria 8611
138 Ga0495626_0001758 3300048091 Bacteria 16495
139 Ga0496101_0229760 3300048904 Bacteria 1442
140 Ga0496101_0283719 3300048904 Unclassified 1295
141 Ga0496104_0128481 3300048907 Bacteria 2434
142 Ga0496108_0077232 3300048911 Bacteria 2816
143 Ga0496109_0072678 3300048912 Bacteria 3160
144 Ga0496110_0036935 3300048913 Bacteria 4244
145 Ga0496110_0213567 3300048913 Bacteria 1754
146 Ga0496111_0020411 3300048914 Bacteria 4612
147 Ga0496114_0236471 3300048917 Bacteria 1605
148 Ga0496114_0276477 3300048917 Bacteria 1480
149 Ga0501031_0003464 3300049568 Bacteria 10125
150 Ga0501031_0006473 3300049568 Bacteria 7637
151 Ga0501031_0051347 3300049568 Bacteria 2685
152 Ga0501031_0068352 3300049568 Bacteria 2314
153 Ga0501031_0207174 3300049568 Bacteria 1278
154 Ga0501032_0054243 3300049569 Bacteria 2698
155 Ga0501032_0100896 3300049569 Bacteria 1912
156 Ga0501033_0002483 3300049570 Bacteria 15636
157 Ga0501033_0012099 3300049570 Bacteria 6587
158 Ga0501033_0032738 3300049570 Bacteria 3904
159 Ga0501033_0140287 3300049570 Bacteria 1747
160 Ga0501036_0000481 3300049572 Bacteria 28441
161 Ga0501036_0008339 3300049572 Bacteria 8489
162 Ga0501036_0075585 3300049572 Bacteria 2848
163 Ga0501036_0086104 3300049572 Bacteria 2656
164 Ga0501037_0006481 3300049573 Bacteria 8560
165 Ga0501037_0008318 3300049573 Bacteria 7603
166 Ga0501037_0139275 3300049573 Bacteria 1737
167 Ga0501038_0014641 3300049574 Bacteria 7147
168 Ga0501038_0021007 3300049574 Bacteria 5866
169 Ga0501038_0031146 3300049574 Bacteria 4715
170 Ga0501038_0036453 3300049574 Bacteria 4316
171 Ga0501038_0057743 3300049574 Bacteria 3331
172 Ga0501039_0001913 3300049575 Bacteria 15423
173 Ga0501039_0002083 3300049575 Bacteria 14830
174 Ga0501039_0021151 3300049575 Bacteria 4990
175 Ga0501039_0023675 3300049575 Bacteria 4714
176 Ga0501039_0062579 3300049575 Bacteria 2883
177 Ga0501039_0216276 3300049575 Bacteria 1507
178 Ga0501040_0004313 3300049576 Bacteria 9240
179 Ga0501040_0006833 3300049576 Bacteria 7397
180 Ga0501040_0117422 3300049576 Bacteria 1864
181 Ga0501040_0127614 3300049576 Bacteria 1787
182 Ga0501040_0223198 3300049576 Bacteria 1341
183 Ga0501041_0000551 3300049577 Bacteria 19413
184 Ga0501041_0002592 3300049577 Bacteria 10313
185 Ga0501041_0007399 3300049577 Bacteria 6447
186 Ga0501041_0008769 3300049577 Bacteria 5950
187 Ga0501041_0016922 3300049577 Bacteria 4337
188 Ga0501042_0002387 3300049578 Bacteria 11509
189 Ga0501042_0014758 3300049578 Bacteria 5334
190 Ga0501042_0101496 3300049578 Bacteria 2069
191 Ga0501042_0159445 3300049578 Bacteria 1627
192 Ga0501043_0008062 3300049579 Bacteria 8313
193 Ga0501043_0165360 3300049579 Bacteria 1728
194 Ga0501046_0001480 3300049580 Bacteria 22508
195 Ga0501046_0004055 3300049580 Bacteria 13363
196 Ga0501046_0012478 3300049580 Bacteria 7231
197 Ga0501048_0000790 3300049582 Bacteria 23204
198 Ga0501048_0004646 3300049582 Bacteria 10451
199 Ga0501048_0014360 3300049582 Bacteria 5865
200 Ga0501048_0045468 3300049582 Bacteria 3136
201 Ga0501068_0001806 3300049584 Bacteria 11369
202 Ga0501068_0003922 3300049584 Bacteria 8089
203 Ga0501068_0030614 3300049584 Bacteria 3193
204 Ga0501068_0061001 3300049584 Bacteria 2290
205 Ga0501068_0106089 3300049584 Bacteria 1744
206 Ga0501069_0004150 3300049585 Bacteria 7483
207 Ga0501069_0007863 3300049585 Bacteria 5598
208 Ga0501069_0010197 3300049585 Bacteria 4969
209 Ga0501070_0007682 3300049586 Bacteria 9148
210 Ga0501070_0027643 3300049586 Bacteria 4759
211 Ga0501071_0016611 3300049587 Bacteria 5063
212 Ga0501071_0019419 3300049587 Bacteria 4716
213 Ga0501071_0044348 3300049587 Bacteria 3189
214 Ga0501071_0051257 3300049587 Bacteria 2973
215 Ga0501072_0002588 3300049588 Bacteria 13563
216 Ga0501072_0009903 3300049588 Bacteria 7249
217 Ga0501072_0025214 3300049588 Bacteria 4630
218 Ga0501072_0042429 3300049588 Bacteria 3573
219 Ga0501072_0079100 3300049588 Bacteria 2603
220 Ga0501072_0180346 3300049588 Bacteria 1684
221 Ga0501073_0004150 3300049589 Bacteria 10866
222 Ga0501073_0021803 3300049589 Bacteria 4615
223 Ga0501073_0064212 3300049589 Bacteria 2560
224 Ga0501074_0003328 3300049590 Bacteria 11380
225 Ga0501074_0031133 3300049590 Bacteria 3865
226 Ga0501075_0005140 3300049591 Bacteria 8949
227 Ga0501075_0029004 3300049591 Bacteria 4090
228 Ga0501075_0031348 3300049591 Bacteria 3945
229 Ga0501075_0040214 3300049591 Bacteria 3501
230 Ga0501075_0048548 3300049591 Bacteria 3189
231 Ga0501075_0057187 3300049591 Bacteria 2936
232 Ga0501075_0124702 3300049591 Bacteria 1960
233 Ga0501076_0002393 3300049592 Bacteria 12849
234 Ga0501076_0002697 3300049592 Bacteria 12269
235 Ga0501076_0008090 3300049592 Bacteria 7686
236 Ga0501076_0021126 3300049592 Bacteria 4988
237 Ga0501076_0021352 3300049592 Bacteria 4965
238 Ga0501076_0026393 3300049592 Bacteria 4499
239 Ga0501077_0002585 3300049593 Bacteria 10847
240 Ga0501077_0003286 3300049593 Bacteria 9733
241 Ga0501077_0011465 3300049593 Bacteria 5537
242 Ga0501077_0023376 3300049593 Bacteria 3919
243 Ga0501077_0026745 3300049593 Bacteria 3663
244 Ga0501077_0055779 3300049593 Bacteria 2509
245 Ga0501077_0062412 3300049593 Bacteria 2364
246 Ga0501077_0146193 3300049593 Bacteria 1499
247 Ga0501079_0010291 3300049741 Bacteria 7105
248 Ga0501079_0033077 3300049741 Bacteria 3976
249 Ga0501079_0078903 3300049741 Bacteria 2546
250 Ga0501079_0090805 3300049741 Bacteria 2366
251 Ga0501079_0146395 3300049741 Bacteria 1841
252 Ga0501079_0151702 3300049741 Bacteria 1806
253 Ga0501080_0005925 3300049742 Bacteria 10951
254 Ga0501080_0008059 3300049742 Bacteria 9547
255 Ga0501080_0011082 3300049742 Bacteria 8250
256 Ga0501080_0033388 3300049742 Bacteria 4802
257 Ga0501080_0095499 3300049742 Bacteria 2760
258 Ga0501081_0001887 3300049743 Bacteria 13012
259 Ga0501081_0002558 3300049743 Bacteria 11477
260 Ga0501081_0017888 3300049743 Bacteria 4700
261 Ga0501081_0067735 3300049743 Bacteria 2484
262 Ga0501081_0135061 3300049743 Bacteria 1765
263 Ga0501081_0140138 3300049743 Bacteria 1733
264 Ga0501083_0000261 3300049744 Bacteria 33465
265 Ga0501083_0010017 3300049744 Bacteria 6687
266 Ga0501083_0054970 3300049744 Bacteria 2670
267 Ga0501083_0070812 3300049744 Bacteria 2319
268 Ga0501083_0130643 3300049744 Bacteria 1646
269 Ga0501035_0002441 3300049822 Bacteria 18160
270 Ga0501035_0023811 3300049822 Bacteria 5618
271 Ga0501035_0041538 3300049822 Bacteria 4152
272 Ga0501035_0046482 3300049822 Bacteria 3905
273 Ga0501044_0125437 3300049823 Bacteria 2565
274 Ga0501045_0002667 3300049824 Bacteria 12172
275 Ga0501045_0005360 3300049824 Bacteria 8888
276 Ga0501045_0007814 3300049824 Bacteria 7439
277 Ga0501045_0014977 3300049824 Bacteria 5503
278 Ga0501045_0026717 3300049824 Bacteria 4155
279 Ga0501045_0033258 3300049824 Bacteria 3738
280 Ga0501045_0038130 3300049824 Bacteria 3495
281 Ga0501045_0051714 3300049824 Bacteria 2998
282 nmdc:mga03683_123932_c1 3300050489 Bacteria 1151
283 nmdc:mga00v17_16981_c1 3300050491 Bacteria 4111
284 nmdc:mga0yw44_102916_c1 3300050492 Bacteria 1821
285 nmdc:mga05p37_11977_c1 3300050507 Bacteria 10347
286 nmdc:mga05p37_14307_c1 3300050507 Bacteria 9527
287 nmdc:mga05p37_1814_c1 3300050507 Bacteria 24880
288 nmdc:mga09592_13430_c1 3300050508 Bacteria 6687
289 nmdc:mga09592_399361_c1 3300050508 Bacteria 1188
290 nmdc:mga0qj67_8475_c1 3300050509 Bacteria 7629
291 nmdc:mga06r32_102989_c1 3300050510 Bacteria 2803
292 nmdc:mga06r32_5405_c1 3300050510 Bacteria 11496
293 nmdc:mga08y16_14737_c1 3300050511 Bacteria 8220
294 nmdc:mga08y16_330700_c1 3300050511 Bacteria 1568
295 nmdc:mga08y16_50288_c1 3300050511 Bacteria 4362
296 nmdc:mga08y16_53850_c1 3300050511 Bacteria 4206
297 nmdc:mga0n895_19848_c1 3300050512 Bacteria 6256
298 nmdc:mga0rr50_4403_c1 3300050513 Bacteria 8277
299 nmdc:mga0a205_2441_c1 3300050515 Bacteria 16399
300 Ga0500569_048576 3300053109 Bacteria 1271
301 Ga0500628_012306 3300053129 Bacteria 1573
302 Ga0500652_003671 3300053131 Bacteria 4675
303 Ga0500658_0015467 3300053134 Bacteria 2833
304 Ga0500561_0000655 3300053137 Bacteria 5470
305 Ga0500579_026227 3300053143 Bacteria 3758
306 Ga0500616_0032333 3300053153 Bacteria 2860
307 Ga0500620_054214 3300053155 Bacteria 1352
308 Ga0500634_0004344 3300053161 Bacteria 6526
309 Ga0500587_001112 3300053739 Bacteria 3693
310 Ga0501084_0007255 3300054114 Bacteria 9137
311 Ga0501084_0020375 3300054114 Bacteria 5530
312 Ga0501084_0053042 3300054114 Bacteria 3391
313 Ga0501084_0069961 3300054114 Bacteria 2938
314 Ga0501084_0117782 3300054114 Bacteria 2233
315 Ga0501084_0167670 3300054114 Bacteria 1853
316 Ga0501082_0013950 3300060353 Bacteria 6910
317 Ga0501082_0041612 3300060353 Bacteria 3961
318 Ga0501082_0050573 3300060353 Bacteria 3583
319 Ga0501082_0056870 3300060353 Bacteria 3370
320 Ga0501082_0262781 3300060353 Bacteria 1501
321 Ga0530510_0048612 3300061734 Bacteria 3066
322 Ga0530510_0159233 3300061734 Bacteria 1669
323 2515496108 2515154088 Bacteria 5526283
324 2515758447 2515154137 Bacteria 5711575
325 2516090372 2515154203 Bacteria 5458536
326 2559429383 2558860280 Bacteria 11429938
327 2643946638 2643221587 Bacteria 7586415
328 2644434442 2643221677 Bacteria 7584031
329 2729909305 2728369276 Bacteria 5610032
330 2753264827 2751185782 Bacteria 11227053
331 2832007415 2832004796 Bacteria 6538017
332 2862575338 2862574272 Bacteria 10567477
333 2866067496 2866065130 Bacteria 6518152
334 2887486260 2887478801 Bacteria 8972725
335 8001785634 8001781756 Bacteria 9586736
336 Ga0075428_100144836
337 JGI25406J46586_10011009
338 Ga0070670_100000779
339 Ga0070675_100184214
340 Ga0070714_100002301
341 Ga0070708_100099051
342 Ga0070678_100222655
343 Ga0070662_100207024
344 Ga0070699_100023387
345 Ga0070679_100033981
346 Ga0070684_100013791
347 Ga0068855_100433752
348 Ga0070664_100094464
349 Ga0068854_100029822
350 Ga0068870_10000391
351 Ga0081455_10010944
352 Ga0081455_10020378
353 Ga0081455_10025035
354 Ga0081455_10035709
355 Ga0081455_10159187
356 Ga0081538_10011237
357 Ga0081538_10080278
358 Ga0081539_10005668
359 Ga0070717_10161620
360 Ga0075365_10002270
361 Ga0075365_10072318
362 Ga0075364_10095875
363 Ga0075432_10002943
364 Ga0075428_100005259
365 Ga0075430_100000347
366 Ga0075430_100005525
367 Ga0075430_100097378
368 Ga0075431_100001622
369 Ga0075431_100033707
370 Ga0075431_100154618
371 Ga0075433_10000155
372 Ga0075434_100003337
373 Ga0075429_100017784
374 Ga0075429_100163692
375 Ga0075429_100427573
376 Ga0075435_100012474
377 Ga0111539_10056021
378 Ga0111539_10068493
379 Ga0111539_10276340
380 Ga0114129_10000658
381 Ga0114129_10112101
382 Ga0114129_10298592
383 Ga0114129_10516064
384 Ga0105243_10189506
385 Ga0105242_10062817
386 Ga0105238_10021360
387 Ga0105239_10035923
388 Ga0105246_10005838
389 Ga0157372_10149044
390 Ga0157375_10246843
391 Ga0157380_10015979
392 Ga0207688_10132568
393 Ga0207694_10017551
394 Ga0207664_10007984
395 Ga0207648_10237458
396 Ga0207428_10001118
397 Ga0207428_10011819
398 Ga0265319_1000528
399 Ga0265319_1005802
400 Ga0265319_1027963
401 Ga0265334_10001606
402 Ga0265318_10001202
403 Ga0265318_10001208
404 Ga0265336_10013690
405 Ga0307517_10010766
406 Ga0265338_10066013
407 Ga0265330_10003534
408 Ga0265332_10007255
409 Ga0265320_10016777
410 Ga0265320_10037095
411 Ga0265325_10001441
412 Ga0265325_10011727
413 Ga0265325_10017485
414 Ga0265329_10005067
415 Ga0265340_10001472
416 Ga0265340_10011264
417 Ga0265339_10005133
418 Ga0265331_10003702
419 Ga0265327_10010667
420 Ga0265327_10039206
421 Ga0265316_10003389
422 Ga0265316_10011630
423 Ga0265313_10002701
424 Ga0307508_10158694
425 Ga0265314_10017608
426 Ga0265342_10020259
427 Ga0316583_10023302
428 Ga0373925_0277187
429 Ga0395899_0005470
430 Ga0395900_0005824
431 Ga0395900_0083208
432 Ga0395900_0180072
433 Ga0395898_0016631
434 Ga0395898_0032278
435 Ga0395898_0088845
436 Ga0395905_0008991
437 Ga0395905_0020837
438 Ga0395905_0235748
439 Ga0395901_0034479
440 Ga0395901_0046948
441 Ga0466969_0003673
442 Ga0466966_0005895
443 Ga0466961_0002227
444 Ga0466970_0134462
445 Ga0466967_0024770
446 Ga0495603_0003048
447 Ga0495603_0029899
448 Ga0495629_0072933
449 Ga0495638_0059019
450 Ga0495641_0008211
451 Ga0495585_0090146
452 Ga0495606_0012430
453 Ga0495630_0015054
454 Ga0495643_0004012
455 Ga0495640_0028651
456 Ga0495633_0084342
457 Ga0495668_0007699
458 Ga0495611_0040534
459 Ga0495625_0006256
460 Ga0495635_0028144
461 Ga0495613_0020876
462 Ga0495624_0018693
463 Ga0495589_0049846
464 Ga0495676_0007989
465 Ga0495676_0014927
466 Ga0495680_0027635
467 Ga0495680_0044505
468 Ga0495680_0092231
469 Ga0495687_018527
470 Ga0495685_000796
471 Ga0495685_003377
472 Ga0495681_0005350
473 Ga0495626_0001758
474 Ga0496101_0229760
475 Ga0496101_0283719
476 Ga0496104_0128481
477 Ga0496108_0077232
478 Ga0496109_0072678
479 Ga0496110_0036935
480 Ga0496110_0213567
481 Ga0496111_0020411
482 Ga0496114_0236471
483 Ga0496114_0276477
484 Ga0501031_0003464
485 Ga0501031_0006473
486 Ga0501031_0051347
487 Ga0501031_0068352
488 Ga0501031_0207174
489 Ga0501032_0054243
490 Ga0501032_0100896
491 Ga0501033_0002483
492 Ga0501033_0012099
493 Ga0501033_0032738
494 Ga0501033_0140287
495 Ga0501036_0000481
496 Ga0501036_0008339
497 Ga0501036_0075585
498 Ga0501036_0086104
499 Ga0501037_0006481
500 Ga0501037_0008318
501 Ga0501037_0139275
502 Ga0501038_0014641
503 Ga0501038_0021007
504 Ga0501038_0031146
505 Ga0501038_0036453
506 Ga0501038_0057743
507 Ga0501039_0001913
508 Ga0501039_0002083
509 Ga0501039_0021151
510 Ga0501039_0023675
511 Ga0501039_0062579
512 Ga0501039_0216276
513 Ga0501040_0004313
514 Ga0501040_0006833
515 Ga0501040_0117422
516 Ga0501040_0127614
517 Ga0501040_0223198
518 Ga0501041_0000551
519 Ga0501041_0002592
520 Ga0501041_0007399
521 Ga0501041_0008769
522 Ga0501041_0016922
523 Ga0501042_0002387
524 Ga0501042_0014758
525 Ga0501042_0101496
526 Ga0501042_0159445
527 Ga0501043_0008062
528 Ga0501043_0165360
529 Ga0501046_0001480
530 Ga0501046_0004055
531 Ga0501046_0012478
532 Ga0501048_0000790
533 Ga0501048_0004646
534 Ga0501048_0014360
535 Ga0501048_0045468
536 Ga0501068_0001806
537 Ga0501068_0003922
538 Ga0501068_0030614
539 Ga0501068_0061001
540 Ga0501068_0106089
541 Ga0501069_0004150
542 Ga0501069_0007863
543 Ga0501069_0010197
544 Ga0501070_0007682
545 Ga0501070_0027643
546 Ga0501071_0016611
547 Ga0501071_0019419
548 Ga0501071_0044348
549 Ga0501071_0051257
550 Ga0501072_0002588
551 Ga0501072_0009903
552 Ga0501072_0025214
553 Ga0501072_0042429
554 Ga0501072_0079100
555 Ga0501072_0180346
556 Ga0501073_0004150
557 Ga0501073_0021803
558 Ga0501073_0064212
559 Ga0501074_0003328
560 Ga0501074_0031133
561 Ga0501075_0005140
562 Ga0501075_0029004
563 Ga0501075_0031348
564 Ga0501075_0040214
565 Ga0501075_0048548
566 Ga0501075_0057187
567 Ga0501075_0124702
568 Ga0501076_0002393
569 Ga0501076_0002697
570 Ga0501076_0008090
571 Ga0501076_0021126
572 Ga0501076_0021352
573 Ga0501076_0026393
574 Ga0501077_0002585
575 Ga0501077_0003286
576 Ga0501077_0011465
577 Ga0501077_0023376
578 Ga0501077_0026745
579 Ga0501077_0055779
580 Ga0501077_0062412
581 Ga0501077_0146193
582 Ga0501079_0010291
583 Ga0501079_0033077
584 Ga0501079_0078903
585 Ga0501079_0090805
586 Ga0501079_0146395
587 Ga0501079_0151702
588 Ga0501080_0005925
589 Ga0501080_0008059
590 Ga0501080_0011082
591 Ga0501080_0033388
592 Ga0501080_0095499
593 Ga0501081_0001887
594 Ga0501081_0002558
595 Ga0501081_0017888
596 Ga0501081_0067735
597 Ga0501081_0135061
598 Ga0501081_0140138
599 Ga0501083_0000261
600 Ga0501083_0010017
601 Ga0501083_0054970
602 Ga0501083_0070812
603 Ga0501083_0130643
604 Ga0501035_0002441
605 Ga0501035_0023811
606 Ga0501035_0041538
607 Ga0501035_0046482
608 Ga0501044_0125437
609 Ga0501045_0002667
610 Ga0501045_0005360
611 Ga0501045_0007814
612 Ga0501045_0014977
613 Ga0501045_0026717
614 Ga0501045_0033258
615 Ga0501045_0038130
616 Ga0501045_0051714
617 nmdc:mga03683_123932_c1
618 nmdc:mga00v17_16981_c1
619 nmdc:mga0yw44_102916_c1
620 nmdc:mga05p37_11977_c1
621 nmdc:mga05p37_14307_c1
622 nmdc:mga05p37_1814_c1
623 nmdc:mga09592_13430_c1
624 nmdc:mga09592_399361_c1
625 nmdc:mga0qj67_8475_c1
626 nmdc:mga06r32_102989_c1
627 nmdc:mga06r32_5405_c1
628 nmdc:mga08y16_14737_c1
629 nmdc:mga08y16_330700_c1
630 nmdc:mga08y16_50288_c1
631 nmdc:mga08y16_53850_c1
632 nmdc:mga0n895_19848_c1
633 nmdc:mga0rr50_4403_c1
634 nmdc:mga0a205_2441_c1
635 Ga0500569_048576
636 Ga0500628_012306
637 Ga0500652_003671
638 Ga0500658_0015467
639 Ga0500561_0000655
640 Ga0500579_026227
641 Ga0500616_0032333
642 Ga0500620_054214
643 Ga0500634_0004344
644 Ga0500587_001112
645 Ga0501084_0007255
646 Ga0501084_0020375
647 Ga0501084_0053042
648 Ga0501084_0069961
649 Ga0501084_0117782
650 Ga0501084_0167670
651 Ga0501082_0013950
652 Ga0501082_0041612
653 Ga0501082_0050573
654 Ga0501082_0056870
655 Ga0501082_0262781
656 Ga0530510_0048612
657 Ga0530510_0159233
658 2515496108
659 2515758447
660 2516090372
661 2559429383
662 2643946638
663 2644434442
664 2729909305
665 2753264827
666 2832007415
667 2862575338
668 2866067496
669 2887486260
670 8001785634

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00356

LacI

Bacterial regulatory proteins, lacI family

48

93

0.99

PF13377

Peripla_BP_3

Periplasmic binding protein-like domain

218

375

0.86

PF00532

Peripla_BP_1

Periplasmic binding proteins and sugar binding domain of LacI family

104

369

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4o5a-assembly1.cif.gz_A-2 the crystal structure of a laci family transcriptional regulator from bifidobacterium animalis subsp. lactis dsm 10140 0.9472 59 336
3k4h-assembly1.cif.gz_A crystal structure of putative transcriptional regulator laci from bacillus cereus subsp. cytotoxis nvh 391-98 0.9422 63 332
4o5a-assembly1.cif.gz_A-2 the crystal structure of a laci family transcriptional regulator from bifidobacterium animalis subsp. lactis dsm 10140 0.9404 59 336
3huu-assembly2.cif.gz_C crystal structure of transcription regulator like protein from staphylococcus haemolyticus 0.9266 60 334
3c3k-assembly1.cif.gz_A crystal structure of an uncharacterized protein from actinobacillus succinogenes 0.9242 60 333
ID Description Score Start End Superfamily
3c3kB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9674 169 292 3.40.50.2300
4o5aA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.951 170 336 3.40.50.2300
2jcgA01 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9389 4 50 1.10.260.40
3kkeB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9364 169 292 3.40.50.2300
2jcgA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9313 167 333 3.40.50.2300
ID Description Score Start End GO Terms
AF-W4TH64-F1-model_v4 deleted 0.9786 59 335
AF-A0A0L7TCQ1-F1-model_v4 LacI family transcriptional regulator 0.9614 220 337 GO:0000976
GO:0003700
AF-A0A1Q2CKB4-F1-model_v4 Transcriptional regulator LacI/GalR-like sensor domain-containing protein 0.9575 63 333 GO:0000976
GO:0003700
AF-A0A6N4U262-F1-model_v4 deleted 0.957 220 337
AF-A0A4Q3DKY9-F1-model_v4 Uncharacterized protein 0.9566 167 271 GO:0000976
GO:0003700
GO:0016798

Map