F412015

General Info

Members Datasets Scaffolds Average Seq Length
334 207 668 307

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221548|2643760522
Length 334
Sequence AVSPPVEPAQPAEPGKPARSTGPLARLRDPAWYQEYGVYVAVAVVLLFNALFTDHFMTADNFRTQLVQVAPIVIVALGMALVIGTEGVDLSVGSTMALAAAFLPLYLGYGLVPALVVSLLAGAVVGAVNGTLVSLVGLQPIVATLALFVGGRGLALVMADGQLKQIVNPDLLSLGTGSFLGVPLVVWIAGVLAVAVAFLVQRTTFGRQIVAVGGNRSAAALAGLPVKRVLIGVYVLCGVLAALAGVLATARLTASDPSSLGTLMELSAITAVVVGGTPLNGGSIRVLGTVAGALLMQLLRATLVKHDLPDSTAQIAQAAIIIAAVYVARERRSR

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
29 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
30 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
49 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
50 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
51 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
52 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
53 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
54 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
59 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
62 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
65 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
72 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
73 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
85 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
86 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
87 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
88 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
97 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
98 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
99 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
100 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
101 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
104 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
105 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
106 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
109 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
110 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
115 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
119 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
120 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
121 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
154 2643221548 Streptomyces sp. Root55 Isolate Unclassified
155 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
156 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
157 2558860280 Kutzneria sp. 744 Isolate Unclassified
158 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
159 2643221578 Streptomyces sp. Root63 Isolate Unclassified
160 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
161 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
162 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
163 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
164 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
165 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
166 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
167 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
168 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
169 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
170 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
171 2808606372 Agromyces sp. 23-23 Isolate Unclassified
172 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
173 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
174 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
175 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
176 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
177 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
178 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
179 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
180 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
181 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
182 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
183 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
184 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
185 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
186 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
187 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
188 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
189 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
190 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
191 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
192 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
193 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
194 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
195 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
196 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
197 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
198 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
199 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
200 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
201 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
202 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
203 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
204 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
205 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
206 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
207 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.83
Metatranscriptomes 0
Isolates 16.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.1
Nodule 0
Rhizoplane 0.3
Rhizosphere 84.13
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000838 3300003203 Bacteria 14462
2 JGI25406J46586_10003766 3300003203 Bacteria 7091
3 rootH2_10029884 3300003320 Bacteria 1475
4 Ga0070658_10002709 3300005327 Bacteria 14738
5 Ga0070683_100014379 3300005329 Bacteria 6923
6 Ga0070683_100234781 3300005329 Bacteria 1744
7 Ga0070668_100012476 3300005347 Bacteria 6329
8 Ga0070667_100010955 3300005367 Bacteria 7498
9 Ga0070713_100086967 3300005436 Bacteria 2681
10 Ga0070663_100013504 3300005455 Bacteria 5212
11 Ga0070681_10335244 3300005458 Bacteria 1422
12 Ga0070679_100036904 3300005530 Bacteria 4852
13 Ga0070679_100341853 3300005530 Bacteria 1445
14 Ga0070684_100048194 3300005535 Bacteria 3696
15 Ga0068853_100040238 3300005539 Bacteria 3988
16 Ga0070665_100128011 3300005548 Bacteria 2542
17 Ga0070665_100554366 3300005548 Bacteria 1162
18 Ga0068855_100009161 3300005563 Bacteria 11954
19 Ga0070664_100168906 3300005564 Bacteria 1939
20 Ga0068854_100002806 3300005578 Bacteria 10826
21 Ga0068856_100125562 3300005614 Bacteria 2569
22 Ga0068852_100009664 3300005616 Bacteria 7166
23 Ga0068852_100091178 3300005616 Bacteria 2727
24 Ga0068863_100381733 3300005841 Bacteria 1376
25 Ga0081539_10000299 3300005985 Bacteria 111908
26 Ga0081539_10003582 3300005985 Bacteria 18828
27 Ga0070717_10536589 3300006028 Bacteria 1059
28 Ga0105240_10130356 3300009093 Bacteria 3017
29 Ga0105241_10007690 3300009174 Bacteria 7925
30 Ga0105237_10035883 3300009545 Bacteria 5015
31 Ga0105238_10012321 3300009551 Bacteria 8622
32 Ga0105238_10014933 3300009551 Bacteria 7861
33 Ga0157374_10242006 3300013296 Bacteria 1774
34 Ga0163163_10383255 3300014325 Bacteria 1463
35 Ga0213875_10001125 3300021388 Bacteria 18443
36 Ga0209758_1005707 3300025297 Bacteria 9393
37 Ga0207647_10039423 3300025904 Bacteria 2980
38 Ga0207705_10016279 3300025909 Bacteria 5333
39 Ga0207654_10082556 3300025911 Bacteria 1938
40 Ga0207695_10011383 3300025913 Bacteria 10783
41 Ga0207671_10001780 3300025914 Bacteria 24145
42 Ga0207671_10138656 3300025914 Bacteria 1872
43 Ga0207649_10365444 3300025920 Bacteria 1072
44 Ga0207694_10061198 3300025924 Bacteria 2930
45 Ga0207700_10348570 3300025928 Bacteria 1289
46 Ga0207661_10000899 3300025944 Bacteria 19494
47 Ga0207679_10108292 3300025945 Bacteria 2188
48 Ga0207668_10014431 3300025972 Bacteria 4889
49 Ga0207640_10079174 3300025981 Bacteria 2239
50 Ga0207658_10012397 3300025986 Bacteria 5823
51 Ga0207639_10023304 3300026041 Bacteria 4469
52 Ga0207678_10001011 3300026067 Bacteria 25645
53 Ga0207641_10097065 3300026088 Bacteria 2590
54 Ga0207698_10008083 3300026142 Bacteria 6635
55 Ga0207698_10158757 3300026142 Bacteria 1974
56 Ga0268266_10075698 3300028379 Bacteria 2924
57 Ga0268266_10389665 3300028379 Bacteria 1316
58 Ga0307515_10058979 3300028794 Bacteria 5513
59 Ga0307515_10125741 3300028794 Bacteria 2866
60 Ga0307511_10000546 3300030521 Bacteria 40380
61 Ga0307511_10005833 3300030521 Bacteria 12449
62 Ga0307512_10048781 3300030522 Bacteria 3424
63 Ga0316177_1180839 3300030731 Bacteria 4582
64 Ga0316176_1102580 3300030732 Bacteria 2437
65 Ga0316180_1192323 3300030736 Bacteria 2702
66 Ga0265340_10004685 3300031247 Bacteria 7611
67 Ga0307513_10017698 3300031456 Bacteria 8537
68 Ga0307513_10127493 3300031456 Bacteria 2497
69 Ga0307509_10289118 3300031507 Bacteria 1395
70 Ga0307408_100009360 3300031548 Bacteria 6457
71 Ga0307508_10181369 3300031616 Bacteria 1708
72 Ga0307514_10085892 3300031649 Bacteria 2311
73 Ga0307405_10032845 3300031731 Bacteria 3072
74 Ga0307405_10035232 3300031731 Bacteria 2987
75 Ga0307413_10015271 3300031824 Bacteria 3930
76 Ga0307413_10029984 3300031824 Bacteria 3051
77 Ga0307410_10020781 3300031852 Bacteria 4025
78 Ga0307410_10028319 3300031852 Bacteria 3552
79 Ga0307406_10006739 3300031901 Bacteria 6352
80 Ga0307406_10069429 3300031901 Bacteria 2304
81 Ga0307407_10038810 3300031903 Bacteria 2642
82 Ga0307407_10090781 3300031903 Bacteria 1872
83 Ga0307412_10081756 3300031911 Bacteria 2235
84 Ga0307412_10142446 3300031911 Bacteria 1758
85 Ga0307409_100000245 3300031995 Bacteria 21848
86 Ga0307409_100016353 3300031995 Bacteria 4906
87 Ga0307416_100007739 3300032002 Bacteria 6867
88 Ga0307416_100088022 3300032002 Bacteria 2654
89 Ga0307416_100149898 3300032002 Bacteria 2137
90 Ga0307416_100342402 3300032002 Bacteria 1509
91 Ga0307414_10027556 3300032004 Bacteria 3674
92 Ga0307411_10011699 3300032005 Bacteria 4751
93 Ga0307415_100000249 3300032126 Bacteria 23267
94 Ga0307415_100084652 3300032126 Bacteria 2276
95 Ga0307415_100261935 3300032126 Bacteria 1411
96 Ga0307507_10006610 3300033179 Bacteria 17616
97 Ga0307507_10039827 3300033179 Bacteria 4734
98 Ga0307510_10125576 3300033180 Bacteria 2256
99 Ga0373951_0000132 3300035091 Bacteria 28345
100 Ga0373935_0018808 3300035692 Bacteria 4209
101 Ga0373925_0110269 3300037068 Bacteria 2125
102 Ga0395900_0006363 3300037418 Bacteria 12311
103 Ga0395900_0097770 3300037418 Bacteria 3016
104 Ga0395898_0047375 3300037466 Bacteria 4219
105 Ga0395905_0016395 3300037471 Bacteria 7041
106 Ga0436364_0733475 3300037853 Bacteria 18458
107 Ga0395901_0026840 3300038443 Bacteria 5913
108 Ga0451837_0022821 3300041494 Bacteria 3050
109 Ga0466969_0047634 3300044656 Bacteria 2121
110 Ga0466972_0012808 3300044658 Bacteria 4212
111 Ga0466972_0015100 3300044658 Bacteria 3861
112 Ga0466972_0080600 3300044658 Bacteria 1550
113 Ga0466965_0039792 3300044683 Bacteria 2312
114 Ga0466966_0008031 3300044684 Bacteria 6991
115 Ga0466966_0012693 3300044684 Bacteria 5583
116 Ga0466966_0175315 3300044684 Bacteria 1302
117 Ga0466966_0196563 3300044684 Bacteria 1221
118 Ga0466961_0016873 3300044693 Bacteria 4691
119 Ga0466961_0033514 3300044693 Bacteria 3299
120 Ga0466961_0056619 3300044693 Bacteria 2498
121 Ga0466963_0002618 3300044694 Bacteria 10102
122 Ga0466963_0002620 3300044694 Bacteria 10100
123 Ga0466963_0038110 3300044694 Bacteria 3142
124 Ga0466963_0051133 3300044694 Bacteria 2738
125 Ga0466963_0121258 3300044694 Bacteria 1800
126 Ga0466963_0178952 3300044694 Bacteria 1480
127 Ga0466963_0339170 3300044694 Bacteria 1058
128 Ga0466964_0007903 3300044706 Bacteria 3983
129 Ga0466971_0010724 3300044719 Bacteria 4009
130 Ga0466971_0010914 3300044719 Bacteria 3972
131 Ga0466971_0011894 3300044719 Bacteria 3812
132 Ga0466971_0111365 3300044719 Bacteria 1263
133 Ga0466970_0005800 3300044765 Bacteria 6142
134 Ga0466970_0006841 3300044765 Bacteria 5708
135 Ga0466970_0018309 3300044765 Bacteria 3624
136 Ga0466970_0031729 3300044765 Bacteria 2790
137 Ga0466970_0036111 3300044765 Bacteria 2617
138 Ga0466970_0039934 3300044765 Bacteria 2491
139 Ga0466970_0092448 3300044765 Bacteria 1643
140 Ga0466970_0206839 3300044765 Bacteria 1093
141 Ga0466957_0128930 3300044842 Bacteria 1618
142 Ga0466957_0180077 3300044842 Bacteria 1380
143 Ga0466957_0324055 3300044842 Bacteria 1040
144 Ga0466960_0002215 3300044901 Bacteria 7257
145 Ga0466960_0002555 3300044901 Bacteria 6839
146 Ga0466960_0016149 3300044901 Bacteria 3233
147 Ga0466959_0017727 3300045049 Bacteria 5222
148 Ga0466959_0128024 3300045049 Bacteria 1801
149 Ga0466959_0162078 3300045049 Bacteria 1572
150 Ga0466959_0322212 3300045049 Bacteria 1056
151 Ga0466967_0002432 3300045976 Bacteria 11583
152 Ga0466967_0092976 3300045976 Bacteria 2743
153 Ga0466967_0245883 3300045976 Bacteria 1707
154 Ga0495592_0012248 3300046454 Bacteria 6509
155 Ga0495592_0047860 3300046454 Bacteria 3183
156 Ga0495603_0005108 3300046455 Bacteria 7837
157 Ga0495603_0069694 3300046455 Bacteria 2068
158 Ga0495603_0109892 3300046455 Bacteria 1609
159 Ga0495629_0001116 3300046459 Bacteria 21245
160 Ga0495629_0001831 3300046459 Bacteria 16647
161 Ga0495629_0090553 3300046459 Bacteria 2134
162 Ga0495651_0003814 3300046462 Bacteria 11526
163 Ga0495651_0158925 3300046462 Bacteria 1621
164 Ga0495662_0003588 3300046476 Bacteria 7839
165 Ga0495662_0004254 3300046476 Bacteria 7205
166 Ga0495662_0098242 3300046476 Bacteria 1432
167 Ga0495594_0003797 3300046499 Bacteria 7749
168 Ga0495618_0054677 3300046514 Bacteria 2527
169 Ga0495628_0194649 3300046516 Bacteria 1530
170 Ga0495652_0003175 3300046529 Bacteria 16384
171 Ga0495665_0004457 3300046531 Bacteria 7558
172 Ga0495640_0015169 3300046533 Bacteria 5803
173 Ga0495640_0018304 3300046533 Bacteria 5199
174 Ga0495640_0022208 3300046533 Bacteria 4643
175 Ga0495586_0052017 3300046535 Bacteria 2217
176 Ga0495587_0178017 3300046536 Bacteria 1206
177 Ga0495645_0010956 3300046543 Bacteria 6367
178 Ga0495645_0024753 3300046543 Bacteria 4355
179 Ga0495622_0003624 3300046557 Bacteria 7249
180 Ga0495667_0132056 3300046559 Bacteria 1610
181 Ga0495634_0011197 3300046642 Bacteria 6540
182 Ga0495634_0019108 3300046642 Bacteria 4870
183 Ga0495634_0161816 3300046642 Bacteria 1411
184 Ga0495611_0065322 3300046648 Bacteria 1658
185 Ga0495625_0055406 3300046660 Bacteria 2828
186 Ga0495635_0118992 3300046663 Bacteria 1802
187 Ga0495588_0012110 3300046674 Bacteria 4067
188 Ga0495657_0014066 3300046675 Bacteria 5878
189 Ga0495657_0024446 3300046675 Bacteria 4302
190 Ga0495657_0042381 3300046675 Bacteria 3108
191 Ga0495599_0016935 3300046678 Bacteria 4529
192 Ga0495623_0038015 3300046679 Bacteria 3078
193 Ga0495613_0009613 3300046689 Bacteria 7183
194 Ga0495624_0241480 3300046690 Bacteria 1093
195 Ga0495600_0065921 3300046809 Bacteria 2368
196 Ga0495600_0141755 3300046809 Bacteria 1559
197 Ga0495604_0006149 3300047317 Bacteria 9528
198 Ga0495604_0006667 3300047317 Bacteria 9150
199 Ga0495604_0200760 3300047317 Bacteria 1383
200 Ga0495676_0004360 3300047321 Bacteria 12923
201 Ga0495676_0034551 3300047321 Bacteria 4240
202 Ga0495675_0012285 3300047444 Bacteria 5390
203 Ga0495675_0039296 3300047444 Bacteria 3013
204 Ga0495675_0045041 3300047444 Bacteria 2809
205 Ga0495675_0147002 3300047444 Bacteria 1458
206 Ga0495675_0187882 3300047444 Bacteria 1262
207 Ga0495685_003092 3300047447 Bacteria 5285
208 Ga0495684_0028067 3300047471 Bacteria 4322
209 Ga0496108_0000238 3300048911 Bacteria 49319
210 Ga0501031_0003940 3300049568 Bacteria 9562
211 Ga0501031_0009923 3300049568 Bacteria 6200
212 Ga0501031_0196364 3300049568 Bacteria 1317
213 Ga0501032_0014340 3300049569 Bacteria 5612
214 Ga0501032_0028001 3300049569 Bacteria 3872
215 Ga0501032_0054379 3300049569 Bacteria 2694
216 Ga0501032_0091437 3300049569 Bacteria 2019
217 Ga0501032_0197051 3300049569 Bacteria 1315
218 Ga0501033_0001558 3300049570 Bacteria 20229
219 Ga0501033_0007027 3300049570 Bacteria 8792
220 Ga0501033_0273109 3300049570 Bacteria 1194
221 Ga0501034_0015008 3300049571 Bacteria 7967
222 Ga0501034_0017355 3300049571 Bacteria 7382
223 Ga0501034_0053888 3300049571 Bacteria 4049
224 Ga0501034_0057194 3300049571 Bacteria 3921
225 Ga0501034_0070520 3300049571 Bacteria 3506
226 Ga0501036_0000185 3300049572 Bacteria 41325
227 Ga0501036_0005606 3300049572 Bacteria 10183
228 Ga0501036_0016681 3300049572 Bacteria 6133
229 Ga0501037_0012305 3300049573 Bacteria 6298
230 Ga0501037_0066112 3300049573 Bacteria 2634
231 Ga0501037_0078611 3300049573 Bacteria 2394
232 Ga0501038_0004281 3300049574 Bacteria 13269
233 Ga0501038_0018168 3300049574 Bacteria 6349
234 Ga0501038_0024406 3300049574 Bacteria 5395
235 Ga0501039_0009688 3300049575 Bacteria 7340
236 Ga0501039_0057989 3300049575 Bacteria 2998
237 Ga0501042_0002131 3300049578 Bacteria 12011
238 Ga0501042_0017542 3300049578 Bacteria 4938
239 Ga0501043_0001386 3300049579 Bacteria 21219
240 Ga0501043_0004849 3300049579 Bacteria 10879
241 Ga0501043_0005349 3300049579 Bacteria 10372
242 Ga0501043_0111214 3300049579 Bacteria 2150
243 Ga0501046_0048784 3300049580 Bacteria 3352
244 Ga0501047_0000065 3300049581 Bacteria 132939
245 Ga0501047_0000732 3300049581 Bacteria 34157
246 Ga0501047_0004805 3300049581 Bacteria 12705
247 Ga0501047_0023629 3300049581 Bacteria 5901
248 Ga0501047_0030928 3300049581 Bacteria 5161
249 Ga0501047_0039487 3300049581 Bacteria 4565
250 Ga0501047_0080304 3300049581 Bacteria 3134
251 Ga0501047_0140613 3300049581 Bacteria 2292
252 Ga0501048_0001456 3300049582 Bacteria 17944
253 Ga0501048_0003542 3300049582 Bacteria 11872
254 Ga0501070_0030597 3300049586 Bacteria 4511
255 Ga0501070_0094613 3300049586 Bacteria 2472
256 Ga0501073_0008859 3300049589 Bacteria 7440
257 Ga0501074_0005841 3300049590 Bacteria 8877
258 Ga0501235_007684 3300049669 Bacteria 2350
259 Ga0501080_0033084 3300049742 Bacteria 4825
260 Ga0501035_0009788 3300049822 Bacteria 8906
261 Ga0501035_0051395 3300049822 Bacteria 3690
262 Ga0501035_0118676 3300049822 Bacteria 2314
263 Ga0501035_0211179 3300049822 Bacteria 1660
264 Ga0501044_0009323 3300049823 Bacteria 10709
265 Ga0501044_0060788 3300049823 Bacteria 3867
266 Ga0501044_0067501 3300049823 Bacteria 3644
267 Ga0501044_0072992 3300049823 Bacteria 3488
268 Ga0501044_0075827 3300049823 Bacteria 3414
269 Ga0501044_0243061 3300049823 Bacteria 1743
270 Ga0501045_0090882 3300049824 Bacteria 2256
271 Ga0501045_0235430 3300049824 Bacteria 1363
272 Ga0500635_0000347 3300053080 Bacteria 15185
273 Ga0500559_0038664 3300053136 Bacteria 2073
274 Ga0500573_0049922 3300053140 Bacteria 2407
275 Ga0500573_0072121 3300053140 Bacteria 1969
276 Ga0500616_0000251 3300053153 Bacteria 83237
277 Ga0500616_0003060 3300053153 Bacteria 13150
278 Ga0466962_0019106 3300061719 Bacteria 3292
279 Ga0466962_0047610 3300061719 Bacteria 2049
280 Ga0466962_0061006 3300061719 Bacteria 1800
281 2643760522 2643221548 Bacteria 8053412
282 2552113386 2551306166 Bacteria 9731570
283 2558905932 2558860112 Bacteria 9931328
284 2559429218 2558860280 Bacteria 11429938
285 2586060918 2585427649 Bacteria 9053857
286 2643898902 2643221578 Bacteria 9213798
287 2644181301 2643221632 Bacteria 3406696
288 2644403538 2643221673 Bacteria 9196637
289 2644443320 2643221678 Bacteria 9540101
290 2644459605 2643221682 Bacteria 6743283
291 2731906205 2731639228 Bacteria 4187555
292 2753071099 2751185734 Bacteria 8863695
293 2791912786 2791354901 Bacteria 8322202
294 2795782573 2795385470 Bacteria 8317180
295 2799184549 2799112218 Bacteria 4315149
296 2804847661 2802429296 Bacteria 7227771
297 2808848721 2808606359 Bacteria 9866990
298 2808903338 2808606372 Bacteria 4649509
299 2809590058 2808606522 Bacteria 9488490
300 2812483250 2811994917 Bacteria 7761064
301 2819700219 2818991463 Bacteria 7948711
302 2861525162 2861520306 Bacteria 8348283
303 2862281939 2862281513 Bacteria 9621493
304 2862290906 2862290372 Bacteria 7471434
305 2862516273 2862507626 Bacteria 9425308
306 2870790065 2870782633 Bacteria 9624083
307 2873152482 2873151551 Bacteria 8625867
308 2875392222 2875391855 Bacteria 7600475
309 2887483368 2887478801 Bacteria 8972725
310 2891403744 2891395885 Bacteria 9251614
311 2895428279 2895427314 Bacteria 13147766
312 2912728040 2912723979 Bacteria 8557534
313 2912764277 2912757875 Bacteria 7940295
314 2915770439 2915768154 Bacteria 8424322
315 2917743828 2917736166 Bacteria 9690793
316 2918508700 2918501144 Bacteria 8668083
317 2919474022 2919468124 Bacteria 9133025
318 2946052662 2946045630 Bacteria 8527308
319 2954721018 2954711539 Bacteria 10867210
320 2954730566 2954721474 Bacteria 10456478
321 2954731470 2954731030 Bacteria 10243860
322 2954749275 2954740390 Bacteria 10229294
323 2954750184 2954749733 Bacteria 10366972
324 2966604977 2966598605 Bacteria 7676064
325 2995464314 2995463766 Bacteria 8577691
326 3003000595 3002998708 Bacteria 11715108
327 3006328144 3006321560 Bacteria 8247479
328 8001786081 8001781756 Bacteria 9586736
329 8003316611 8003314358 Bacteria 10575343
330 8025416471 8025413630 Bacteria 7014048
331 8025531628 8025530807 Bacteria 8495698
332 8033685300 8033684223 Bacteria 6906479
333 8047712690 8047710418 Bacteria 11023148
334 8055073670 8055066027 Bacteria 9479577
335 JGI25406J46586_10000838
336 JGI25406J46586_10003766
337 rootH2_10029884
338 Ga0070658_10002709
339 Ga0070683_100014379
340 Ga0070683_100234781
341 Ga0070668_100012476
342 Ga0070667_100010955
343 Ga0070713_100086967
344 Ga0070663_100013504
345 Ga0070681_10335244
346 Ga0070679_100036904
347 Ga0070679_100341853
348 Ga0070684_100048194
349 Ga0068853_100040238
350 Ga0070665_100128011
351 Ga0070665_100554366
352 Ga0068855_100009161
353 Ga0070664_100168906
354 Ga0068854_100002806
355 Ga0068856_100125562
356 Ga0068852_100009664
357 Ga0068852_100091178
358 Ga0068863_100381733
359 Ga0081539_10000299
360 Ga0081539_10003582
361 Ga0070717_10536589
362 Ga0105240_10130356
363 Ga0105241_10007690
364 Ga0105237_10035883
365 Ga0105238_10012321
366 Ga0105238_10014933
367 Ga0157374_10242006
368 Ga0163163_10383255
369 Ga0213875_10001125
370 Ga0209758_1005707
371 Ga0207647_10039423
372 Ga0207705_10016279
373 Ga0207654_10082556
374 Ga0207695_10011383
375 Ga0207671_10001780
376 Ga0207671_10138656
377 Ga0207649_10365444
378 Ga0207694_10061198
379 Ga0207700_10348570
380 Ga0207661_10000899
381 Ga0207679_10108292
382 Ga0207668_10014431
383 Ga0207640_10079174
384 Ga0207658_10012397
385 Ga0207639_10023304
386 Ga0207678_10001011
387 Ga0207641_10097065
388 Ga0207698_10008083
389 Ga0207698_10158757
390 Ga0268266_10075698
391 Ga0268266_10389665
392 Ga0307515_10058979
393 Ga0307515_10125741
394 Ga0307511_10000546
395 Ga0307511_10005833
396 Ga0307512_10048781
397 Ga0316177_1180839
398 Ga0316176_1102580
399 Ga0316180_1192323
400 Ga0265340_10004685
401 Ga0307513_10017698
402 Ga0307513_10127493
403 Ga0307509_10289118
404 Ga0307408_100009360
405 Ga0307508_10181369
406 Ga0307514_10085892
407 Ga0307405_10032845
408 Ga0307405_10035232
409 Ga0307413_10015271
410 Ga0307413_10029984
411 Ga0307410_10020781
412 Ga0307410_10028319
413 Ga0307406_10006739
414 Ga0307406_10069429
415 Ga0307407_10038810
416 Ga0307407_10090781
417 Ga0307412_10081756
418 Ga0307412_10142446
419 Ga0307409_100000245
420 Ga0307409_100016353
421 Ga0307416_100007739
422 Ga0307416_100088022
423 Ga0307416_100149898
424 Ga0307416_100342402
425 Ga0307414_10027556
426 Ga0307411_10011699
427 Ga0307415_100000249
428 Ga0307415_100084652
429 Ga0307415_100261935
430 Ga0307507_10006610
431 Ga0307507_10039827
432 Ga0307510_10125576
433 Ga0373951_0000132
434 Ga0373935_0018808
435 Ga0373925_0110269
436 Ga0395900_0006363
437 Ga0395900_0097770
438 Ga0395898_0047375
439 Ga0395905_0016395
440 Ga0436364_0733475
441 Ga0395901_0026840
442 Ga0451837_0022821
443 Ga0466969_0047634
444 Ga0466972_0012808
445 Ga0466972_0015100
446 Ga0466972_0080600
447 Ga0466965_0039792
448 Ga0466966_0008031
449 Ga0466966_0012693
450 Ga0466966_0175315
451 Ga0466966_0196563
452 Ga0466961_0016873
453 Ga0466961_0033514
454 Ga0466961_0056619
455 Ga0466963_0002618
456 Ga0466963_0002620
457 Ga0466963_0038110
458 Ga0466963_0051133
459 Ga0466963_0121258
460 Ga0466963_0178952
461 Ga0466963_0339170
462 Ga0466964_0007903
463 Ga0466971_0010724
464 Ga0466971_0010914
465 Ga0466971_0011894
466 Ga0466971_0111365
467 Ga0466970_0005800
468 Ga0466970_0006841
469 Ga0466970_0018309
470 Ga0466970_0031729
471 Ga0466970_0036111
472 Ga0466970_0039934
473 Ga0466970_0092448
474 Ga0466970_0206839
475 Ga0466957_0128930
476 Ga0466957_0180077
477 Ga0466957_0324055
478 Ga0466960_0002215
479 Ga0466960_0002555
480 Ga0466960_0016149
481 Ga0466959_0017727
482 Ga0466959_0128024
483 Ga0466959_0162078
484 Ga0466959_0322212
485 Ga0466967_0002432
486 Ga0466967_0092976
487 Ga0466967_0245883
488 Ga0495592_0012248
489 Ga0495592_0047860
490 Ga0495603_0005108
491 Ga0495603_0069694
492 Ga0495603_0109892
493 Ga0495629_0001116
494 Ga0495629_0001831
495 Ga0495629_0090553
496 Ga0495651_0003814
497 Ga0495651_0158925
498 Ga0495662_0003588
499 Ga0495662_0004254
500 Ga0495662_0098242
501 Ga0495594_0003797
502 Ga0495618_0054677
503 Ga0495628_0194649
504 Ga0495652_0003175
505 Ga0495665_0004457
506 Ga0495640_0015169
507 Ga0495640_0018304
508 Ga0495640_0022208
509 Ga0495586_0052017
510 Ga0495587_0178017
511 Ga0495645_0010956
512 Ga0495645_0024753
513 Ga0495622_0003624
514 Ga0495667_0132056
515 Ga0495634_0011197
516 Ga0495634_0019108
517 Ga0495634_0161816
518 Ga0495611_0065322
519 Ga0495625_0055406
520 Ga0495635_0118992
521 Ga0495588_0012110
522 Ga0495657_0014066
523 Ga0495657_0024446
524 Ga0495657_0042381
525 Ga0495599_0016935
526 Ga0495623_0038015
527 Ga0495613_0009613
528 Ga0495624_0241480
529 Ga0495600_0065921
530 Ga0495600_0141755
531 Ga0495604_0006149
532 Ga0495604_0006667
533 Ga0495604_0200760
534 Ga0495676_0004360
535 Ga0495676_0034551
536 Ga0495675_0012285
537 Ga0495675_0039296
538 Ga0495675_0045041
539 Ga0495675_0147002
540 Ga0495675_0187882
541 Ga0495685_003092
542 Ga0495684_0028067
543 Ga0496108_0000238
544 Ga0501031_0003940
545 Ga0501031_0009923
546 Ga0501031_0196364
547 Ga0501032_0014340
548 Ga0501032_0028001
549 Ga0501032_0054379
550 Ga0501032_0091437
551 Ga0501032_0197051
552 Ga0501033_0001558
553 Ga0501033_0007027
554 Ga0501033_0273109
555 Ga0501034_0015008
556 Ga0501034_0017355
557 Ga0501034_0053888
558 Ga0501034_0057194
559 Ga0501034_0070520
560 Ga0501036_0000185
561 Ga0501036_0005606
562 Ga0501036_0016681
563 Ga0501037_0012305
564 Ga0501037_0066112
565 Ga0501037_0078611
566 Ga0501038_0004281
567 Ga0501038_0018168
568 Ga0501038_0024406
569 Ga0501039_0009688
570 Ga0501039_0057989
571 Ga0501042_0002131
572 Ga0501042_0017542
573 Ga0501043_0001386
574 Ga0501043_0004849
575 Ga0501043_0005349
576 Ga0501043_0111214
577 Ga0501046_0048784
578 Ga0501047_0000065
579 Ga0501047_0000732
580 Ga0501047_0004805
581 Ga0501047_0023629
582 Ga0501047_0030928
583 Ga0501047_0039487
584 Ga0501047_0080304
585 Ga0501047_0140613
586 Ga0501048_0001456
587 Ga0501048_0003542
588 Ga0501070_0030597
589 Ga0501070_0094613
590 Ga0501073_0008859
591 Ga0501074_0005841
592 Ga0501235_007684
593 Ga0501080_0033084
594 Ga0501035_0009788
595 Ga0501035_0051395
596 Ga0501035_0118676
597 Ga0501035_0211179
598 Ga0501044_0009323
599 Ga0501044_0060788
600 Ga0501044_0067501
601 Ga0501044_0072992
602 Ga0501044_0075827
603 Ga0501044_0243061
604 Ga0501045_0090882
605 Ga0501045_0235430
606 Ga0500635_0000347
607 Ga0500559_0038664
608 Ga0500573_0049922
609 Ga0500573_0072121
610 Ga0500616_0000251
611 Ga0500616_0003060
612 Ga0466962_0019106
613 Ga0466962_0047610
614 Ga0466962_0061006
615 2643760522
616 2552113386
617 2558905932
618 2559429218
619 2586060918
620 2643898902
621 2644181301
622 2644403538
623 2644443320
624 2644459605
625 2731906205
626 2753071099
627 2791912786
628 2795782573
629 2799184549
630 2804847661
631 2808848721
632 2808903338
633 2809590058
634 2812483250
635 2819700219
636 2861525162
637 2862281939
638 2862290906
639 2862516273
640 2870790065
641 2873152482
642 2875392222
643 2887483368
644 2891403744
645 2895428279
646 2912728040
647 2912764277
648 2915770439
649 2917743828
650 2918508700
651 2919474022
652 2946052662
653 2954721018
654 2954730566
655 2954731470
656 2954749275
657 2954750184
658 2966604977
659 2995464314
660 3003000595
661 3006328144
662 8001786081
663 8003316611
664 8025416471
665 8025531628
666 8033685300
667 8047712690
668 8055073670

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02653

BPD_transp_2

Branched-chain amino acid transport system / permease component

61

325

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4g1u-assembly1.cif.gz_B x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.6611 12 282
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.6226 41 310
7kyo-assembly1.cif.gz_C-2 psabc from streptococcus pneumoniae in complex with fab 0.6169 41 310
7kyp-assembly4.cif.gz_N psabc from streptococcus pneumoniae in complex with fab 0.6068 31 303
4g1u-assembly1.cif.gz_B x-ray structure of the bacterial heme transporter hmuuv from yersinia pestis 0.5966 12 282
ID Description Score Start End Superfamily
af_P39328_55_321_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9787 43 303 1.10.3470.10
af_P0AE26_50_315_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9713 40 304 1.10.3470.10
af_P32720_52_318_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9667 40 304 1.10.3470.10
af_P0AGI1_45_314_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9658 40 304 1.10.3470.10
af_P0AE26_50_315_1.10.3470.10 Mainly Alpha;Orthogonal Bundle;ABC transporter involved in vitamin B12 uptake, BtuC;ABC transporter involved in vitamin B12 uptake, BtuC 0.9641 40 304 1.10.3470.10
ID Description Score Start End GO Terms
AF-A0A1C4LU27-F1-model_v4 deleted 0.9957 12 293
AF-A0A7W0QG22-F1-model_v4 ABC transporter permease 0.9938 11 307 GO:0005886
GO:0022857
AF-F3ZID0-F1-model_v4 Putative sugar uptake ABC transporter permease protein 0.9873 47 310 GO:0005886
GO:0022857
AF-A0A3D4WXV3-F1-model_v4 ATPase 0.9862 9 311 GO:0005886
GO:0022857
AF-A0A7W7S3F1-F1-model_v4 Ribose transport system permease protein 0.9858 1 311 GO:0005886
GO:0022857

Map