F411786

General Info

Members Datasets Scaffolds Average Seq Length
334 260 668 512

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10162349|Ga0105239_101623492
Length 582
Sequence MPTSLAFGPFRLDTDAGILFHGVEPTPLGQRAVALLALLVERAGAPVPKEALIEAAWPRQAIEDSNLTVQIAAVRRLFEELAGGACWIETLPRRGYRYVGPAVTGASRDSTVGGAPTATLTLPDKPSVAVLPFSNLSGDSEQDYFADGMVDDIITGLARINWLLVIARNSTFTYKGRAVDVKQVGRELGVRYVLEGSVRRAGGHVRVTGQMIDASTGAHVWAERYDRSSDDIFALQDEIAISAVGAIAPRLRRAEIDRVKRRRPDSLDAYDLVLRAQLDVDSGMPERVMRALVLLERAIELDPAYALAHGNAAMCHHCLFLRAGLQEADRAASIRYARSAILHGQDDAFALTLAGFSIGMDGHDRNAAFTALEAALAISPSSAPTYILGSVILGWSGEAERAIEWSERGMRLSPFDPWAFAAFDAQAMSHFLRGRYDEACRAAYKSVQANPAHSITYVQLAAALAKLGRLEEARAAAARVLELQPTFRYGRQFAGVTVLQRWRNALAMRCVLLDCQSSAIESVRPGAGTTVLMARYRRSQHDYPPCLDGATIGCGRRLILWNDQPAQVASLPPIAGAASMPA

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
47 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
48 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
49 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
81 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
82 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
107 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
108 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
133 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
146 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
147 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
151 2512875024
152 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
153 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
154 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
155 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
156 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
157 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
158 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
159 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
160 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
161 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
162 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
163 2824679649 Bradyrhizobium sp.HAMBI 2116 Isolate Unclassified
164 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
165 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
166 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
167 2838048938 Rhizobium pisi 27/80 Isolate Nodule
168 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
169 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
170 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
171 2841957949 Bradyrhizobium sp. CIR1 Isolate Nodule
172 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
173 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
174 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
175 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
176 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
177 2856320880 Mesorhizobium sp. M8A.F.Ca.ET.165.01.1.1 Isolate Nodule
178 2856334872 Mesorhizobium sp. M7A.F.Ca.US.005.03.1.1 Isolate Nodule
179 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
180 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
181 2857367948 Mesorhizobium sp. M7A.F.Ca.US.002.01.1.1 Isolate Nodule
182 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
183 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
184 2871444079 Mesorhizobium sp. M1A.F.Ca.IN.020.06.1.1 Isolate Nodule
185 2871466892 Mesorhizobium sp. M7D.F.Ca.US.004.01.2.1 Isolate Nodule
186 2874139085 Mesorhizobium sp. M8A.F.Ca.ET.207.01.1.1 Isolate Nodule
187 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
188 2876377896 Mesorhizobium sp. M2C.T.Ca.TU.009.01.2.1 Isolate Nodule
189 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
190 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
191 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
192 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
193 2881665667 Bradyrhizobium vignae LMG 28791 Isolate Unclassified
194 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
195 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
196 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
197 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
198 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
199 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
200 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
201 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
202 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
203 2906354277 Mesorhizobium sp. M2A.F.Ca.ET.040.01.1.1 Isolate Nodule
204 2906378014 Mesorhizobium sp. M7D.F.Ca.US.004.03.1.1 Isolate Nodule
205 2922151315 Mesorhizobium sp. M7A.F.Ca.US.007.01.2.1 Isolate Nodule
206 2922158528 Mesorhizobium sp. M1A.F.Ca.IN.022.05.2.1 Isolate Nodule
207 2922393267 Bradyrhizobium sp. WBAH10 Isolate Nodule
208 2924726620 Mesorhizobium sp. M1A.F.Ca.IN.020.03.2.1 Isolate Nodule
209 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
210 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
211 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
212 2937848649 Mesorhizobium sp. WSM4310 Isolate Unclassified
213 2937972304 Mesorhizobium sp. M8A.F.Ca.ET.173.01.1.1 Isolate Nodule
214 2938014810 Mesorhizobium sp. M2C.T.Ca.TU.002.02.1.1 Isolate Nodule
215 2958034702 Mesorhizobium sp. M8A.F.Ca.ET.202.01.1.1 Isolate Nodule
216 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
217 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
218 2958122699 Mesorhizobium sp. M7A.F.Ca.US.001.04.2.1 Isolate Nodule
219 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
220 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
221 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
222 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
223 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
224 2965032056 Mesorhizobium sp. M7A.F.Ca.US.006.04.2.1 Isolate Nodule
225 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
226 2968016561 Mesorhizobium sp. M8A.F.Ca.ET.182.01.1.1 Isolate Nodule
227 2970469710 Mesorhizobium sp. M8A.F.Ca.ET.181.01.1.1 Isolate Nodule
228 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
229 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
230 2977858184 Mesorhizobium sp. M1A.F.Ca.IN.020.03.1.1 Isolate Nodule
231 2977872689 Mesorhizobium sp. M7A.F.Ca.US.001.04.1.1 Isolate Nodule
232 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
233 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
234 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
235 2979793036 Mesorhizobium sp. M7A.F.Ca.US.007.01.1.1 Isolate Nodule
236 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
237 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
238 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
239 2987673487 Mesorhizobium sp. M7A.F.Ca.US.003.02.1.1 Isolate Nodule
240 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
241 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
242 2996893221 Rhizobium sp. R635 Isolate Nodule
243 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
244 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
245 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
246 3004239961 Mesorhizobium sp. M7A.F.Ca.US.005.03.2.1 Isolate Nodule
247 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
248 3005483717 Bradyrhizobium agreste CNPSo 4010 Isolate Unclassified
249 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
250 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule
251 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
252 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
253 8004445564 Mesorhizobium sp. M1A.F.Ca.IN.020.04.1.1 Isolate Nodule
254 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
255 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
256 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
257 8016613128 Bradyrhizobium sp. LB7.1 Isolate Nodule
258 8016622563 Bradyrhizobium sp. LB13.1 Isolate Nodule
259 8019547302 Bradyrhizobium sp. LB1.3 Isolate Nodule
260 8019648815 Bradyrhizobium sp. GM24.11 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 66.77
Metatranscriptomes 0
Isolates 33.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.68
Nodule 28.74
Rhizoplane 3.29
Rhizosphere 52.99
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10162349 3300010375 Bacteria 2497
2 JGI25152J39213_1001168 3300002773 Bacteria 12131
3 JGI25151J46595_10000547 3300003187 Bacteria 34450
4 JGI25165J46597_1000025 3300003214 Bacteria 333075
5 JGI25165J46597_1000093 3300003214 Bacteria 164901
6 JGI25153J46596_10001678 3300003215 Bacteria 13127
7 JGI25153J46596_10001983 3300003215 Bacteria 12131
8 Ga0055540_1001159 3300003792 Bacteria 16403
9 Ga0055531_10009884 3300003794 Bacteria 4824
10 Ga0070658_10019076 3300005327 Bacteria 5493
11 Ga0070670_100006645 3300005331 Bacteria 9800
12 Ga0070670_100106134 3300005331 Bacteria 2420
13 Ga0070680_100055842 3300005336 Bacteria 3227
14 Ga0070691_10052897 3300005341 Bacteria 1942
15 Ga0070661_100052600 3300005344 Bacteria 2981
16 Ga0070659_100022267 3300005366 Bacteria 4836
17 Ga0070659_100091315 3300005366 Bacteria 2441
18 Ga0070694_100014917 3300005444 Bacteria 4868
19 Ga0070663_100033138 3300005455 Bacteria 3567
20 Ga0070662_100158798 3300005457 Bacteria 1767
21 Ga0070681_10050263 3300005458 Bacteria 4160
22 Ga0070679_100042696 3300005530 Bacteria 4516
23 Ga0070679_100058368 3300005530 Bacteria 3845
24 Ga0068853_100050559 3300005539 Bacteria 3576
25 Ga0070695_100005466 3300005545 Bacteria 7479
26 Ga0070665_100131424 3300005548 Bacteria 2506
27 Ga0068855_100018452 3300005563 Bacteria 8383
28 Ga0068855_100042650 3300005563 Bacteria 5375
29 Ga0068855_100103656 3300005563 Bacteria 3273
30 Ga0070664_100072884 3300005564 Bacteria 2946
31 Ga0070664_100094658 3300005564 Bacteria 2590
32 Ga0068854_100034453 3300005578 Bacteria 3537
33 Ga0068856_100014978 3300005614 Bacteria 7490
34 Ga0068856_100063274 3300005614 Bacteria 3655
35 Ga0068852_100006242 3300005616 Bacteria 8596
36 Ga0068852_100017472 3300005616 Bacteria 5629
37 Ga0068852_100182487 3300005616 Bacteria 1974
38 Ga0068859_100141703 3300005617 Bacteria 2478
39 Ga0068851_10002833 3300005834 Bacteria 7647
40 Ga0068863_100045256 3300005841 Bacteria 4177
41 Ga0075365_10061647 3300006038 Bacteria 2505
42 Ga0075369_10026223 3300006186 Bacteria 2428
43 Ga0075369_10031740 3300006186 Bacteria 2231
44 Ga0075370_10022324 3300006353 Bacteria 3474
45 Ga0075436_100020265 3300006914 Bacteria 4564
46 Ga0097620_100018532 3300006931 Bacteria 6995
47 Ga0097620_100141697 3300006931 Bacteria 2478
48 Ga0099822_1025722 3300006943 Bacteria 5074
49 Ga0105240_10049725 3300009093 Bacteria 5290
50 Ga0105240_10142535 3300009093 Bacteria 2864
51 Ga0105245_10017417 3300009098 Bacteria 6268
52 Ga0114129_10332033 3300009147 Bacteria 2018
53 Ga0105241_10026672 3300009174 Bacteria 4300
54 Ga0105238_10012267 3300009551 Bacteria 8643
55 Ga0105238_10038152 3300009551 Bacteria 4880
56 Ga0105238_10043444 3300009551 Bacteria 4548
57 Ga0105238_10156551 3300009551 Bacteria 2253
58 Ga0105239_10301005 3300010375 Bacteria 1806
59 Ga0157370_10016147 3300013104 Bacteria 7569
60 Ga0157370_10060391 3300013104 Bacteria 3599
61 Ga0157370_10140669 3300013104 Bacteria 2249
62 Ga0157369_10251808 3300013105 Bacteria 1843
63 Ga0157374_10017516 3300013296 Bacteria 6309
64 Ga0163163_10017579 3300014325 Bacteria 6673
65 Ga0163163_10217165 3300014325 Bacteria 1961
66 Ga0157379_10011588 3300014968 Bacteria 7699
67 Ga0183362_10010 3300015683 Bacteria 106392
68 Ga0207425_1001538 3300025245 Bacteria 9461
69 Ga0209129_1000259 3300025258 Bacteria 53817
70 Ga0209233_1000053 3300025261 Bacteria 444909
71 Ga0209233_1001400 3300025261 Bacteria 9538
72 Ga0209676_1002637 3300025292 Bacteria 12223
73 Ga0209025_1000084 3300025294 Bacteria 263812
74 Ga0209025_1013800 3300025294 Bacteria 5040
75 Ga0209758_1000151 3300025297 Bacteria 162732
76 Ga0209758_1000775 3300025297 Bacteria 45897
77 Ga0209758_1002095 3300025297 Bacteria 21194
78 Ga0209758_1013696 3300025297 Bacteria 4394
79 Ga0209051_1001054 3300025303 Bacteria 25787
80 Ga0209257_1001977 3300025304 Bacteria 22036
81 Ga0207656_10012983 3300025321 Bacteria 3173
82 Ga0207710_10009954 3300025900 Bacteria 3998
83 Ga0207688_10039333 3300025901 Bacteria 2626
84 Ga0207705_10022833 3300025909 Bacteria 4461
85 Ga0207707_10028262 3300025912 Bacteria 4902
86 Ga0207707_10045326 3300025912 Bacteria 3832
87 Ga0207695_10146145 3300025913 Bacteria 2308
88 Ga0207695_10146190 3300025913 Bacteria 2308
89 Ga0207693_10161966 3300025915 Bacteria 1760
90 Ga0207660_10006663 3300025917 Bacteria 7490
91 Ga0207657_10147027 3300025919 Bacteria 1922
92 Ga0207652_10055617 3300025921 Bacteria 3404
93 Ga0207694_10001375 3300025924 Bacteria 20938
94 Ga0207694_10006918 3300025924 Bacteria 8610
95 Ga0207644_10145735 3300025931 Bacteria 1828
96 Ga0207690_10038035 3300025932 Bacteria 3129
97 Ga0207706_10125174 3300025933 Bacteria 2261
98 Ga0207689_10043777 3300025942 Bacteria 3700
99 Ga0207679_10070861 3300025945 Bacteria 2628
100 Ga0207667_10107407 3300025949 Bacteria 2879
101 Ga0207667_10196166 3300025949 Bacteria 2071
102 Ga0207640_10149989 3300025981 Bacteria 1712
103 Ga0207639_10147236 3300026041 Bacteria 1969
104 Ga0207678_10033073 3300026067 Bacteria 4506
105 Ga0207702_10018099 3300026078 Bacteria 5830
106 Ga0207641_10113169 3300026088 Bacteria 2409
107 Ga0207676_10055233 3300026095 Bacteria 3116
108 Ga0207674_10054866 3300026116 Bacteria 4055
109 Ga0207698_10019589 3300026142 Bacteria 4636
110 Ga0207698_10084347 3300026142 Bacteria 2575
111 Ga0209389_1000550 3300027296 Bacteria 22872
112 Ga0209589_1000874 3300027357 Bacteria 45837
113 Ga0209489_100178 3300027361 Bacteria 99953
114 Ga0268266_10118185 3300028379 Bacteria 2357
115 Ga0307408_100003042 3300031548 Bacteria 11582
116 Ga0307408_100077931 3300031548 Bacteria 2469
117 Ga0265313_10035376 3300031595 Bacteria 2516
118 Ga0265314_10016743 3300031711 Bacteria 5777
119 Ga0265342_10000631 3300031712 Bacteria 36866
120 Ga0307405_10004432 3300031731 Bacteria 6639
121 Ga0307413_10003848 3300031824 Bacteria 6409
122 Ga0307406_10004110 3300031901 Bacteria 7925
123 Ga0307409_100040756 3300031995 Bacteria 3461
124 Ga0307416_100002137 3300032002 Bacteria 11177
125 Ga0307414_10033863 3300032004 Bacteria 3381
126 Ga0307411_10012372 3300032005 Bacteria 4654
127 Ga0307510_10008632 3300033180 Bacteria 12144
128 Ga0373937_0012706 3300036401 Bacteria 7410
129 Ga0395900_0000591 3300037418 Bacteria 49743
130 Ga0395900_0002888 3300037418 Bacteria 18709
131 Ga0395900_0070487 3300037418 Bacteria 3594
132 Ga0395898_0023502 3300037466 Bacteria 6227
133 Ga0395898_0084906 3300037466 Bacteria 3052
134 Ga0395905_0041074 3300037471 Bacteria 4340
135 Ga0395905_0047830 3300037471 Bacteria 4008
136 Ga0395905_0223168 3300037471 Bacteria 1763
137 Ga0395901_0024143 3300038443 Bacteria 6237
138 Ga0395901_0046783 3300038443 Bacteria 4494
139 Ga0395901_0059133 3300038443 Bacteria 3988
140 Ga0395901_0059997 3300038443 Bacteria 3958
141 Ga0395901_0152585 3300038443 Bacteria 2427
142 Ga0451577_0137987 3300042876 Bacteria 2190
143 Ga0466966_0087533 3300044684 Bacteria 1936
144 Ga0466963_0008108 3300044694 Bacteria 6289
145 Ga0451576_0227680 3300045051 Bacteria 1947
146 Ga0466967_0019653 3300045976 Bacteria 5438
147 Ga0495585_0061058 3300046492 Bacteria 2074
148 Ga0495606_0052089 3300046507 Bacteria 2664
149 Ga0496100_0076254 3300048903 Bacteria 2251
150 Ga0496102_0050378 3300048905 Bacteria 3791
151 Ga0496104_0054060 3300048907 Bacteria 3795
152 Ga0496105_0131619 3300048908 Bacteria 2062
153 Ga0496108_0025858 3300048911 Bacteria 4840
154 Ga0496109_0053035 3300048912 Bacteria 3697
155 Ga0496110_0039500 3300048913 Bacteria 4109
156 Ga0496111_0127816 3300048914 Bacteria 1879
157 Ga0496112_0057989 3300048915 Bacteria 3812
158 Ga0496113_0014351 3300048916 Bacteria 5403
159 Ga0496119_0035469 3300048922 Bacteria 3268
160 Ga0496120_0003651 3300048923 Bacteria 13791
161 Ga0501031_0064523 3300049568 Bacteria 2385
162 Ga0501032_0009374 3300049569 Bacteria 7090
163 Ga0501032_0082101 3300049569 Bacteria 2144
164 Ga0501033_0063666 3300049570 Bacteria 2714
165 Ga0501033_0074029 3300049570 Bacteria 2500
166 Ga0501033_0088161 3300049570 Bacteria 2270
167 Ga0501034_0000229 3300049571 Bacteria 105030
168 Ga0501034_0001110 3300049571 Bacteria 37765
169 Ga0501034_0022531 3300049571 Bacteria 6418
170 Ga0501034_0166011 3300049571 Bacteria 2176
171 Ga0501036_0002090 3300049572 Bacteria 15571
172 Ga0501036_0023403 3300049572 Bacteria 5204
173 Ga0501037_0006794 3300049573 Bacteria 8362
174 Ga0501037_0030387 3300049573 Bacteria 3992
175 Ga0501037_0033915 3300049573 Bacteria 3769
176 Ga0501037_0039665 3300049573 Bacteria 3466
177 Ga0501038_0055248 3300049574 Bacteria 3412
178 Ga0501038_0117885 3300049574 Bacteria 2192
179 Ga0501039_0045237 3300049575 Bacteria 3400
180 Ga0501039_0109759 3300049575 Bacteria 2156
181 Ga0501043_0001873 3300049579 Bacteria 18026
182 Ga0501043_0015725 3300049579 Bacteria 5932
183 Ga0501046_0003951 3300049580 Bacteria 13542
184 Ga0501047_0000164 3300049581 Bacteria 81200
185 Ga0501047_0062810 3300049581 Bacteria 3582
186 Ga0501047_0087485 3300049581 Bacteria 2993
187 Ga0501047_0169097 3300049581 Bacteria 2055
188 Ga0501048_0008634 3300049582 Bacteria 7692
189 Ga0501048_0034484 3300049582 Bacteria 3650
190 Ga0501068_0027027 3300049584 Bacteria 3386
191 Ga0501069_0024269 3300049585 Bacteria 3306
192 Ga0501069_0032582 3300049585 Bacteria 2868
193 Ga0501070_0004562 3300049586 Bacteria 11881
194 Ga0501070_0017223 3300049586 Bacteria 6067
195 Ga0501070_0050560 3300049586 Bacteria 3450
196 Ga0501070_0125675 3300049586 Bacteria 2119
197 Ga0501073_0031391 3300049589 Bacteria 3790
198 Ga0501073_0101753 3300049589 Bacteria 1995
199 Ga0501074_0015907 3300049590 Bacteria 5472
200 Ga0501074_0062910 3300049590 Bacteria 2673
201 Ga0501079_0058315 3300049741 Bacteria 2979
202 Ga0501080_0000458 3300049742 Bacteria 31621
203 Ga0501080_0021631 3300049742 Bacteria 5954
204 Ga0501083_0008894 3300049744 Bacteria 7092
205 Ga0501083_0012176 3300049744 Bacteria 6023
206 Ga0501083_0017130 3300049744 Bacteria 5055
207 Ga0501035_0022053 3300049822 Bacteria 5850
208 Ga0501035_0028180 3300049822 Bacteria 5126
209 Ga0501035_0088738 3300049822 Bacteria 2724
210 Ga0501044_0000252 3300049823 Bacteria 68048
211 Ga0501044_0001195 3300049823 Bacteria 30773
212 Ga0501044_0024859 3300049823 Bacteria 6353
213 Ga0501044_0049191 3300049823 Bacteria 4353
214 Ga0501044_0099434 3300049823 Bacteria 2927
215 Ga0501044_0167137 3300049823 Bacteria 2173
216 Ga0501045_0013595 3300049824 Bacteria 5752
217 nmdc:mga0yw44_11245_c1 3300050492 Bacteria 4610
218 nmdc:mga08x19_53781_c1 3300050514 Bacteria 2591
219 nmdc:mga0sz30_15241_c1 3300050516 Bacteria 3036
220 Ga0500569_007308 3300053109 Bacteria 2471
221 Ga0500627_0004074 3300053158 Bacteria 4629
222 Ga0501084_0020081 3300054114 Bacteria 5571
223 Ga0501082_0049243 3300060353 Bacteria 3633
224 2508543244 2508501009 Bacteria 7784016
225 2512958912 2512875024 Bacteria 7195110
226 2513611517 2513237090 Bacteria 7096802
227 2513627903 2513237092 Bacteria 8341956
228 2513637734 2513237094 Bacteria 8789602
229 2513872262 2513237139 Bacteria 8737671
230 2514013989 2513237161 Bacteria 8871253
231 2514039203 2513237164 Bacteria 7563725
232 2599938684 2599185301 Bacteria 6161860
233 2719668229 2718217997 Bacteria 6740740
234 2720494992 2718218199 Bacteria 6740745
235 2805918134 2802429603 Bacteria 8777136
236 2824677949 2824671348 Bacteria 8369588
237 2824681301 2824679649 Bacteria 8248951
238 2824694374 2824687955 Bacteria 8360029
239 2824702704 2824696289 Bacteria 8335049
240 2824779195 2824773399 Bacteria 8360218
241 2838054454 2838048938 Bacteria 6044578
242 2838126339 2838122688 Bacteria 8803140
243 2841943583 2841941048 Bacteria 8688029
244 2841950467 2841949485 Bacteria 8680857
245 2841958171 2841957949 Bacteria 8652217
246 2841966781 2841966195 Bacteria 8673214
247 2841975536 2841974524 Bacteria 8931498
248 2841988324 2841983080 Bacteria 8395090
249 2842396653 2842395702 Bacteria 6780583
250 2847946045 2847939898 Bacteria 8606328
251 2856321756 2856320880 Bacteria 7263508
252 2856335111 2856334872 Bacteria 7037011
253 2856350692 2856349417 Bacteria 6230045
254 2857351669 2857349434 Bacteria 7926032
255 2857368870 2857367948 Bacteria 6965560
256 2869289629 2869285874 Bacteria 6901219
257 2871431695 2871429161 Bacteria 6547891
258 2871449417 2871444079 Bacteria 6423508
259 2871474111 2871466892 Bacteria 6923287
260 2874139895 2874139085 Bacteria 7021506
261 2874626810 2874620515 Bacteria 8290088
262 2876380953 2876377896 Bacteria 6565995
263 2878748301 2878745973 Bacteria 6867388
264 2878756902 2878753008 Bacteria 6922523
265 2881157755 2881155292 Bacteria 6461656
266 2881163085 2881161766 Bacteria 7127907
267 2881672171 2881665667 Bacteria 8175609
268 2881846989 2881845957 Bacteria 6611900
269 2881857676 2881853255 Bacteria 6698367
270 2882914643 2882912400 Bacteria 6801539
271 2885345707 2885342637 Bacteria 7011821
272 2885357403 2885350715 Bacteria 6787678
273 2889013402 2889010040 Bacteria 6749192
274 2904668388 2904666416 Bacteria 8226587
275 2906311918 2906308376 Bacteria 6841989
276 2906323655 2906321335 Bacteria 6579571
277 2906360043 2906354277 Bacteria 6991324
278 2906378812 2906378014 Bacteria 6911440
279 2922155205 2922151315 Bacteria 6902399
280 2922159269 2922158528 Bacteria 6573167
281 2922395818 2922393267 Bacteria 8285685
282 2924729127 2924726620 Bacteria 6271473
283 2924764750 2924762789 Bacteria 6561353
284 2935988402 2935984226 Bacteria 8302647
285 2937818262 2937813078 Bacteria 7783518
286 2937848883 2937848649 Bacteria 6983481
287 2937976237 2937972304 Bacteria 7532020
288 2938015305 2938014810 Bacteria 6700592
289 2958038823 2958034702 Bacteria 6989922
290 2958048475 2958041894 Bacteria 13082850
291 2958066203 2958064165 Bacteria 7158582
292 2958128658 2958122699 Bacteria 7280457
293 2958134001 2958130278 Bacteria 6897202
294 2958183647 2958179912 Bacteria 6874908
295 2961081613 2961077736 Bacteria 7079850
296 2961135955 2961127735 Bacteria 7196641
297 2961174915 2961170736 Bacteria 7072258
298 2965036343 2965032056 Bacteria 6887443
299 2968000099 2967996073 Bacteria 6787468
300 2968016871 2968016561 Bacteria 7022047
301 2970470315 2970469710 Bacteria 6969209
302 2970507501 2970503327 Bacteria 7099517
303 2977826116 2977821940 Bacteria 6906439
304 2977862337 2977858184 Bacteria 6215359
305 2977872764 2977872689 Bacteria 7270173
306 2977925524 2977922695 Bacteria 6956781
307 2977946605 2977942078 Bacteria 7570577
308 2977973801 2977971508 Bacteria 7472917
309 2979797057 2979793036 Bacteria 6808957
310 2979812678 2979808191 Bacteria 7179355
311 2987638854 2987636660 Bacteria 8088555
312 2987669521 2987666974 Bacteria 6509233
313 2987680810 2987673487 Bacteria 6884027
314 2996342350 2996341866 Bacteria 6643098
315 2996355316 2996348954 Bacteria 7239054
316 2996895552 2996893221 Bacteria 5823108
317 3004204903 3004203850 Bacteria 7307914
318 3004217059 3004211236 Bacteria 7417683
319 3004225348 3004218560 Bacteria 7421728
320 3004243888 3004239961 Bacteria 6892290
321 3004281848 3004275668 Bacteria 7114440
322 3005489629 3005483717 Bacteria 7877331
323 3005598664 3005594810 Bacteria 8716512
324 649875777 649633066 Bacteria 6690028
325 8004378494 8004374579 Bacteria 6898112
326 8004391506 8004387939 Bacteria 7049250
327 8004447508 8004445564 Bacteria 6322258
328 8004646086 8004640170 Bacteria 6723001
329 8004716875 8004714634 Bacteria 6776161
330 8005486777 8005484373 Bacteria 6297373
331 8016622489 8016613128 Bacteria 8794220
332 8016627295 8016622563 Bacteria 7999408
333 8019554394 8019547302 Bacteria 7996444
334 8019657711 8019648815 Bacteria 10014479
335 Ga0105239_10162349
336 JGI25152J39213_1001168
337 JGI25151J46595_10000547
338 JGI25165J46597_1000025
339 JGI25165J46597_1000093
340 JGI25153J46596_10001678
341 JGI25153J46596_10001983
342 Ga0055540_1001159
343 Ga0055531_10009884
344 Ga0070658_10019076
345 Ga0070670_100006645
346 Ga0070670_100106134
347 Ga0070680_100055842
348 Ga0070691_10052897
349 Ga0070661_100052600
350 Ga0070659_100022267
351 Ga0070659_100091315
352 Ga0070694_100014917
353 Ga0070663_100033138
354 Ga0070662_100158798
355 Ga0070681_10050263
356 Ga0070679_100042696
357 Ga0070679_100058368
358 Ga0068853_100050559
359 Ga0070695_100005466
360 Ga0070665_100131424
361 Ga0068855_100018452
362 Ga0068855_100042650
363 Ga0068855_100103656
364 Ga0070664_100072884
365 Ga0070664_100094658
366 Ga0068854_100034453
367 Ga0068856_100014978
368 Ga0068856_100063274
369 Ga0068852_100006242
370 Ga0068852_100017472
371 Ga0068852_100182487
372 Ga0068859_100141703
373 Ga0068851_10002833
374 Ga0068863_100045256
375 Ga0075365_10061647
376 Ga0075369_10026223
377 Ga0075369_10031740
378 Ga0075370_10022324
379 Ga0075436_100020265
380 Ga0097620_100018532
381 Ga0097620_100141697
382 Ga0099822_1025722
383 Ga0105240_10049725
384 Ga0105240_10142535
385 Ga0105245_10017417
386 Ga0114129_10332033
387 Ga0105241_10026672
388 Ga0105238_10012267
389 Ga0105238_10038152
390 Ga0105238_10043444
391 Ga0105238_10156551
392 Ga0105239_10301005
393 Ga0157370_10016147
394 Ga0157370_10060391
395 Ga0157370_10140669
396 Ga0157369_10251808
397 Ga0157374_10017516
398 Ga0163163_10017579
399 Ga0163163_10217165
400 Ga0157379_10011588
401 Ga0183362_10010
402 Ga0207425_1001538
403 Ga0209129_1000259
404 Ga0209233_1000053
405 Ga0209233_1001400
406 Ga0209676_1002637
407 Ga0209025_1000084
408 Ga0209025_1013800
409 Ga0209758_1000151
410 Ga0209758_1000775
411 Ga0209758_1002095
412 Ga0209758_1013696
413 Ga0209051_1001054
414 Ga0209257_1001977
415 Ga0207656_10012983
416 Ga0207710_10009954
417 Ga0207688_10039333
418 Ga0207705_10022833
419 Ga0207707_10028262
420 Ga0207707_10045326
421 Ga0207695_10146145
422 Ga0207695_10146190
423 Ga0207693_10161966
424 Ga0207660_10006663
425 Ga0207657_10147027
426 Ga0207652_10055617
427 Ga0207694_10001375
428 Ga0207694_10006918
429 Ga0207644_10145735
430 Ga0207690_10038035
431 Ga0207706_10125174
432 Ga0207689_10043777
433 Ga0207679_10070861
434 Ga0207667_10107407
435 Ga0207667_10196166
436 Ga0207640_10149989
437 Ga0207639_10147236
438 Ga0207678_10033073
439 Ga0207702_10018099
440 Ga0207641_10113169
441 Ga0207676_10055233
442 Ga0207674_10054866
443 Ga0207698_10019589
444 Ga0207698_10084347
445 Ga0209389_1000550
446 Ga0209589_1000874
447 Ga0209489_100178
448 Ga0268266_10118185
449 Ga0307408_100003042
450 Ga0307408_100077931
451 Ga0265313_10035376
452 Ga0265314_10016743
453 Ga0265342_10000631
454 Ga0307405_10004432
455 Ga0307413_10003848
456 Ga0307406_10004110
457 Ga0307409_100040756
458 Ga0307416_100002137
459 Ga0307414_10033863
460 Ga0307411_10012372
461 Ga0307510_10008632
462 Ga0373937_0012706
463 Ga0395900_0000591
464 Ga0395900_0002888
465 Ga0395900_0070487
466 Ga0395898_0023502
467 Ga0395898_0084906
468 Ga0395905_0041074
469 Ga0395905_0047830
470 Ga0395905_0223168
471 Ga0395901_0024143
472 Ga0395901_0046783
473 Ga0395901_0059133
474 Ga0395901_0059997
475 Ga0395901_0152585
476 Ga0451577_0137987
477 Ga0466966_0087533
478 Ga0466963_0008108
479 Ga0451576_0227680
480 Ga0466967_0019653
481 Ga0495585_0061058
482 Ga0495606_0052089
483 Ga0496100_0076254
484 Ga0496102_0050378
485 Ga0496104_0054060
486 Ga0496105_0131619
487 Ga0496108_0025858
488 Ga0496109_0053035
489 Ga0496110_0039500
490 Ga0496111_0127816
491 Ga0496112_0057989
492 Ga0496113_0014351
493 Ga0496119_0035469
494 Ga0496120_0003651
495 Ga0501031_0064523
496 Ga0501032_0009374
497 Ga0501032_0082101
498 Ga0501033_0063666
499 Ga0501033_0074029
500 Ga0501033_0088161
501 Ga0501034_0000229
502 Ga0501034_0001110
503 Ga0501034_0022531
504 Ga0501034_0166011
505 Ga0501036_0002090
506 Ga0501036_0023403
507 Ga0501037_0006794
508 Ga0501037_0030387
509 Ga0501037_0033915
510 Ga0501037_0039665
511 Ga0501038_0055248
512 Ga0501038_0117885
513 Ga0501039_0045237
514 Ga0501039_0109759
515 Ga0501043_0001873
516 Ga0501043_0015725
517 Ga0501046_0003951
518 Ga0501047_0000164
519 Ga0501047_0062810
520 Ga0501047_0087485
521 Ga0501047_0169097
522 Ga0501048_0008634
523 Ga0501048_0034484
524 Ga0501068_0027027
525 Ga0501069_0024269
526 Ga0501069_0032582
527 Ga0501070_0004562
528 Ga0501070_0017223
529 Ga0501070_0050560
530 Ga0501070_0125675
531 Ga0501073_0031391
532 Ga0501073_0101753
533 Ga0501074_0015907
534 Ga0501074_0062910
535 Ga0501079_0058315
536 Ga0501080_0000458
537 Ga0501080_0021631
538 Ga0501083_0008894
539 Ga0501083_0012176
540 Ga0501083_0017130
541 Ga0501035_0022053
542 Ga0501035_0028180
543 Ga0501035_0088738
544 Ga0501044_0000252
545 Ga0501044_0001195
546 Ga0501044_0024859
547 Ga0501044_0049191
548 Ga0501044_0099434
549 Ga0501044_0167137
550 Ga0501045_0013595
551 nmdc:mga0yw44_11245_c1
552 nmdc:mga08x19_53781_c1
553 nmdc:mga0sz30_15241_c1
554 Ga0500569_007308
555 Ga0500627_0004074
556 Ga0501084_0020081
557 Ga0501082_0049243
558 2508543244
559 2512958912
560 2513611517
561 2513627903
562 2513637734
563 2513872262
564 2514013989
565 2514039203
566 2599938684
567 2719668229
568 2720494992
569 2805918134
570 2824677949
571 2824681301
572 2824694374
573 2824702704
574 2824779195
575 2838054454
576 2838126339
577 2841943583
578 2841950467
579 2841958171
580 2841966781
581 2841975536
582 2841988324
583 2842396653
584 2847946045
585 2856321756
586 2856335111
587 2856350692
588 2857351669
589 2857368870
590 2869289629
591 2871431695
592 2871449417
593 2871474111
594 2874139895
595 2874626810
596 2876380953
597 2878748301
598 2878756902
599 2881157755
600 2881163085
601 2881672171
602 2881846989
603 2881857676
604 2882914643
605 2885345707
606 2885357403
607 2889013402
608 2904668388
609 2906311918
610 2906323655
611 2906360043
612 2906378812
613 2922155205
614 2922159269
615 2922395818
616 2924729127
617 2924764750
618 2935988402
619 2937818262
620 2937848883
621 2937976237
622 2938015305
623 2958038823
624 2958048475
625 2958066203
626 2958128658
627 2958134001
628 2958183647
629 2961081613
630 2961135955
631 2961174915
632 2965036343
633 2968000099
634 2968016871
635 2970470315
636 2970507501
637 2977826116
638 2977862337
639 2977872764
640 2977925524
641 2977946605
642 2977973801
643 2979797057
644 2979812678
645 2987638854
646 2987669521
647 2987680810
648 2996342350
649 2996355316
650 2996895552
651 3004204903
652 3004217059
653 3004225348
654 3004243888
655 3004281848
656 3005489629
657 3005598664
658 649875777
659 8004378494
660 8004391506
661 8004447508
662 8004646086
663 8004716875
664 8005486777
665 8016622489
666 8016627295
667 8019554394
668 8019657711

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13181

TPR_8

Tetratricopeptide repeat

455

487

0.95

PF14559

TPR_19

Tetratricopeptide repeat

430

491

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.9444 422 487
4cgw-assembly1.cif.gz_A second tpr of spaghetti (rpap3) bound to hsp90 peptide srmeevd 0.9157 381 485
3kd7-assembly5.cif.gz_E designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) 0.9099 386 483
2avp-assembly1.cif.gz_A crystal structure of an 8 repeat consensus tpr superhelix 0.9057 422 487
4cgq-assembly1.cif.gz_A full length tah1 bound to hsp90 peptide srmeevd 0.8981 420 488
ID Description Score Start End Superfamily
af_Q5SNE4_305_394_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9822 420 487 1.25.40.10
af_Q5CZ52_184_270_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9303 420 486 1.25.40.10
af_Q4DPL2_62_177_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9279 382 483 1.25.40.10
af_I1MVQ3_259_385_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.918 386 486 1.25.40.10
af_A0A0R0E971_72_178_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9169 382 485 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A212DVN0-F1-model_v4 deleted 0.9381 139 303
AF-A0A0S8HES5-F1-model_v4 FlgO domain-containing protein 0.9277 129 319
AF-A0A7K4DY11-F1-model_v4 deleted 0.9266 179 517
AF-A0A7K4DY11-F1-model_v4 deleted 0.9163 179 517
AF-A0A529M8C6-F1-model_v4 OmpR/PhoB-type domain-containing protein 0.8933 1 113 GO:0000160
GO:0003677
GO:0006355

Map