F411556

General Info

Members Datasets Scaffolds Average Seq Length
333 161 666 707

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_17415_c1|nmdc:mga08y16_17415_c1_1497_3704
Length 628
Sequence MHKRDLSLGSQTLSIETGRLAKQADGSVVVRMGDTMVLVTACHSSSPREGIDFLPLTVDYREYTYASGRIPGGFFKREGKATEKETLTSRLIDRPIRPLFPTGWAYETQVIAFVLSADTENDSDVLALTGAGAALALSEMPVDKTVAAVRIGLVDGQFIVNPTFPQRKQSKLNSFGALADAMRIKGKLVNYATVAKVEKDMLAGLPESLADHKLEAKGLFHAMQERALREEVLGKNIRQDGRRFDEIRQITIENSVLPRVHGSTVFTRGETQALVTATLGTADDQQKIEMVDGETWKRFMLHYNFPPFSVGEVKPMRGPGRREIGHGALAERALAPMIPAETDFAYTIRIVSDILESNGSSSMASVCGGSLAMMDAGVPIKAPVAGVAMGLIMDEATGKYAVLSDIAGAEDHYGDMDFKVAGTASGITALQMDIKISGVSAQVMRDALAQAKAGRMHILQKMQESLATHRSNMSAYAPRIITIKIPVDKIRDVIGPGGKMIRSIIEKTGVKIDVEDDGHVNVASSDEAAANKAIGMIQELTATAELNKTYLGKVQRITDFGAFVEIMPGTDGLLHVSEIAHYRVKDVRDELKEGQQVLVKVINIDPTGKIRLSRKALITPEEGGAPPA

Samples

Sample ID Description Type Environment
1 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
97 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
104 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
105 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
106 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
107 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
108 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
132 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
150 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
151 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
152 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
153 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
154 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
157 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
158 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
159 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.8
Nodule 0
Rhizoplane 2.7
Rhizosphere 95.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08y16_17415_c1 3300050511 Bacteria 7566
2 JGI24746J21847_1001182 3300001977 Bacteria 4131
3 JGI25406J46586_10004557 3300003203 Bacteria 6450
4 JGI25406J46586_10004875 3300003203 Bacteria 6237
5 Ga0065704_10100069 3300005289 Bacteria 2287
6 Ga0065715_10089889 3300005293 Bacteria 8203
7 Ga0065707_10001501 3300005295 Bacteria 7697
8 Ga0065707_10001533 3300005295 Bacteria 8871
9 Ga0070676_10027509 3300005328 Bacteria 3226
10 Ga0070683_100000059 3300005329 Bacteria 81605
11 Ga0070670_100024443 3300005331 Bacteria 5195
12 Ga0070670_100044041 3300005331 Bacteria 3837
13 Ga0070670_100091216 3300005331 Bacteria 2619
14 Ga0068868_100004716 3300005338 Bacteria 9577
15 Ga0070687_100001546 3300005343 Bacteria 8154
16 Ga0070669_100003696 3300005353 Bacteria 11039
17 Ga0070669_100017614 3300005353 Bacteria 5096
18 Ga0070674_100000892 3300005356 Bacteria 15598
19 Ga0070674_100002439 3300005356 Bacteria 10291
20 Ga0070674_100031618 3300005356 Bacteria 3509
21 Ga0070673_100004061 3300005364 Bacteria 9218
22 Ga0070688_100003720 3300005365 Bacteria 7891
23 Ga0070688_100010657 3300005365 Bacteria 5076
24 Ga0070667_100036983 3300005367 Bacteria 4093
25 Ga0070667_100040875 3300005367 Bacteria 3889
26 Ga0070714_100104389 3300005435 Bacteria 2501
27 Ga0070700_100003856 3300005441 Bacteria 7778
28 Ga0070678_100029233 3300005456 Bacteria 3771
29 Ga0070662_100011331 3300005457 Bacteria 5882
30 Ga0070685_10019259 3300005466 Bacteria 3680
31 Ga0070698_100039488 3300005471 Bacteria 4858
32 Ga0070699_100009771 3300005518 Bacteria 8300
33 Ga0070679_100066396 3300005530 Bacteria 3596
34 Ga0070684_100001140 3300005535 Bacteria 19092
35 Ga0070672_100013571 3300005543 Bacteria 5760
36 Ga0070693_100022997 3300005547 Bacteria 3324
37 Ga0070665_100004520 3300005548 Bacteria 14572
38 Ga0070665_100008933 3300005548 Bacteria 10154
39 Ga0070664_100003077 3300005564 Bacteria 13480
40 Ga0070664_100047409 3300005564 Bacteria 3630
41 Ga0068854_100044614 3300005578 Bacteria 3148
42 Ga0068859_100001016 3300005617 Bacteria 28725
43 Ga0068859_100018605 3300005617 Bacteria 6984
44 Ga0068859_100021410 3300005617 Bacteria 6489
45 Ga0068861_100067999 3300005719 Bacteria 2751
46 Ga0068870_10002913 3300005840 Bacteria 7207
47 Ga0068860_100001339 3300005843 Bacteria 26803
48 Ga0068860_100010327 3300005843 Bacteria 9233
49 Ga0068862_100005050 3300005844 Bacteria 11100
50 Ga0068862_100016509 3300005844 Bacteria 6146
51 Ga0068862_100040822 3300005844 Bacteria 3946
52 Ga0081538_10037715 3300005981 Bacteria 3128
53 Ga0081539_10000142 3300005985 Bacteria 165444
54 Ga0081539_10000215 3300005985 Bacteria 135054
55 Ga0081539_10005345 3300005985 Bacteria 13179
56 Ga0075363_100020227 3300006048 Bacteria 3336
57 Ga0075370_10030975 3300006353 Bacteria 2985
58 Ga0075428_100001164 3300006844 Bacteria 28182
59 Ga0075428_100002343 3300006844 Bacteria 20552
60 Ga0075428_100008098 3300006844 Bacteria 11670
61 Ga0075428_100009033 3300006844 Bacteria 11061
62 Ga0075428_100022166 3300006844 Bacteria 7031
63 Ga0075428_100024437 3300006844 Bacteria 6687
64 Ga0075428_100026495 3300006844 Bacteria 6418
65 Ga0075428_100030192 3300006844 Bacteria 5996
66 Ga0075430_100000059 3300006846 Bacteria 58299
67 Ga0075430_100001509 3300006846 Bacteria 19006
68 Ga0075430_100013891 3300006846 Bacteria 6863
69 Ga0075430_100044001 3300006846 Bacteria 3776
70 Ga0075431_100003164 3300006847 Bacteria 15924
71 Ga0075431_100003653 3300006847 Bacteria 14917
72 Ga0075431_100037639 3300006847 Bacteria 4982
73 Ga0075431_100057831 3300006847 Bacteria 3999
74 Ga0075431_100105389 3300006847 Bacteria 2910
75 Ga0075431_100119097 3300006847 Bacteria 2724
76 Ga0075434_100001575 3300006871 Bacteria 19332
77 Ga0075434_100002563 3300006871 Bacteria 16046
78 Ga0075434_100006154 3300006871 Bacteria 10987
79 Ga0075434_100042714 3300006871 Bacteria 4495
80 Ga0075429_100002792 3300006880 Bacteria 14771
81 Ga0075429_100067636 3300006880 Bacteria 3109
82 Ga0075429_100101812 3300006880 Bacteria 2508
83 Ga0068865_100011595 3300006881 Bacteria 5524
84 Ga0075436_100001140 3300006914 Bacteria 17973
85 Ga0075436_100017980 3300006914 Bacteria 4841
86 Ga0097620_100001016 3300006931 Bacteria 28725
87 Ga0097620_100018605 3300006931 Bacteria 6984
88 Ga0097620_100021408 3300006931 Bacteria 6489
89 Ga0075435_100000417 3300007076 Bacteria 26219
90 Ga0075435_100034538 3300007076 Bacteria 4007
91 Ga0075435_100036840 3300007076 Bacteria 3890
92 Ga0105240_10008866 3300009093 Bacteria 14316
93 Ga0111539_10000366 3300009094 Bacteria 55748
94 Ga0111539_10001426 3300009094 Bacteria 31862
95 Ga0111539_10003201 3300009094 Bacteria 21662
96 Ga0111539_10004274 3300009094 Bacteria 18700
97 Ga0111539_10006001 3300009094 Bacteria 15696
98 Ga0111539_10019442 3300009094 Bacteria 8382
99 Ga0111539_10025081 3300009094 Bacteria 7308
100 Ga0114129_10000145 3300009147 Bacteria 74706
101 Ga0114129_10000282 3300009147 Bacteria 58440
102 Ga0114129_10001770 3300009147 Bacteria 29438
103 Ga0114129_10002887 3300009147 Bacteria 24054
104 Ga0114129_10003147 3300009147 Bacteria 23166
105 Ga0114129_10004143 3300009147 Bacteria 20488
106 Ga0114129_10005131 3300009147 Bacteria 18434
107 Ga0114129_10012843 3300009147 Bacteria 11918
108 Ga0114129_10034579 3300009147 Bacteria 7140
109 Ga0114129_10039224 3300009147 Bacteria 6677
110 Ga0114129_10039617 3300009147 Bacteria 6643
111 Ga0114129_10080271 3300009147 Bacteria 4534
112 Ga0105248_10004004 3300009177 Bacteria 16289
113 Ga0105249_10000783 3300009553 Bacteria 28521
114 Ga0105249_10010653 3300009553 Bacteria 8076
115 Ga0157374_10026258 3300013296 Bacteria 5239
116 Ga0157378_10064506 3300013297 Bacteria 3277
117 Ga0163162_10001948 3300013306 Bacteria 19388
118 Ga0157375_10051084 3300013308 Bacteria 4058
119 Ga0157375_10074168 3300013308 Bacteria 3423
120 Ga0163163_10000013 3300014325 Bacteria 242522
121 Ga0163163_10015413 3300014325 Bacteria 7067
122 Ga0157380_10001715 3300014326 Bacteria 14466
123 Ga0157377_10006043 3300014745 Bacteria 5743
124 Ga0157376_10059092 3300014969 Bacteria 3214
125 Ga0207697_10000240 3300025315 Bacteria 29906
126 Ga0207697_10001073 3300025315 Bacteria 15094
127 Ga0207688_10001593 3300025901 Bacteria 11964
128 Ga0207645_10001097 3300025907 Bacteria 22310
129 Ga0207645_10013725 3300025907 Bacteria 5444
130 Ga0207695_10070570 3300025913 Bacteria 3570
131 Ga0207695_10087114 3300025913 Bacteria 3147
132 Ga0207662_10000781 3300025918 Bacteria 14617
133 Ga0207650_10061767 3300025925 Bacteria 2798
134 Ga0207659_10000700 3300025926 Bacteria 19884
135 Ga0207659_10024465 3300025926 Bacteria 4047
136 Ga0207659_10046987 3300025926 Bacteria 3052
137 Ga0207664_10040843 3300025929 Bacteria 3611
138 Ga0207690_10034322 3300025932 Bacteria 3268
139 Ga0207706_10035506 3300025933 Bacteria 4431
140 Ga0207669_10000421 3300025937 Bacteria 18532
141 Ga0207691_10021536 3300025940 Bacteria 6086
142 Ga0207711_10013018 3300025941 Bacteria 6909
143 Ga0207689_10017963 3300025942 Bacteria 5971
144 Ga0207689_10086065 3300025942 Bacteria 2583
145 Ga0207679_10001907 3300025945 Bacteria 12939
146 Ga0207679_10010258 3300025945 Bacteria 6027
147 Ga0207679_10021122 3300025945 Bacteria 4405
148 Ga0207651_10079750 3300025960 Bacteria 2353
149 Ga0207712_10011250 3300025961 Bacteria 5697
150 Ga0207712_10015796 3300025961 Bacteria 4877
151 Ga0207668_10073379 3300025972 Bacteria 2452
152 Ga0207640_10012335 3300025981 Bacteria 4863
153 Ga0207703_10014027 3300026035 Bacteria 6246
154 Ga0207708_10001958 3300026075 Bacteria 15193
155 Ga0207702_10048316 3300026078 Bacteria 3588
156 Ga0207648_10015104 3300026089 Bacteria 7108
157 Ga0207648_10062767 3300026089 Bacteria 3239
158 Ga0207674_10027034 3300026116 Bacteria 6079
159 Ga0207674_10044691 3300026116 Bacteria 4562
160 Ga0207675_100002045 3300026118 Bacteria 20115
161 Ga0207683_10002823 3300026121 Bacteria 15171
162 Ga0207683_10022834 3300026121 Bacteria 5374
163 Ga0207683_10024892 3300026121 Bacteria 5158
164 Ga0207428_10000294 3300027907 Bacteria 66640
165 Ga0207428_10000491 3300027907 Bacteria 47284
166 Ga0207428_10000600 3300027907 Bacteria 42629
167 Ga0207428_10001379 3300027907 Bacteria 25705
168 Ga0207428_10010698 3300027907 Bacteria 8183
169 Ga0207428_10016749 3300027907 Bacteria 6303
170 Ga0268265_10037927 3300028380 Bacteria 3540
171 Ga0268264_10001361 3300028381 Bacteria 22905
172 Ga0307405_10014519 3300031731 Bacteria 4238
173 Ga0307410_10005542 3300031852 Bacteria 6693
174 Ga0307409_100009347 3300031995 Bacteria 6018
175 Ga0307409_100038567 3300031995 Bacteria 3535
176 Ga0307409_100040909 3300031995 Bacteria 3457
177 Ga0307416_100068054 3300032002 Bacteria 2940
178 Ga0373953_0017726 3300035117 Bacteria 2623
179 Ga0373954_0011617 3300035118 Bacteria 3906
180 Ga0373957_0004574 3300035120 Bacteria 4219
181 Ga0373947_0023005 3300035725 Bacteria 3621
182 Ga0373937_0000965 3300036401 Bacteria 24394
183 Ga0373937_0001372 3300036401 Bacteria 20347
184 Ga0439464_0000051 3300042439 Bacteria 15685
185 Ga0451577_0032270 3300042876 Bacteria 4719
186 Ga0453684_0160228 3300044712 Bacteria 2662
187 Ga0451576_0055338 3300045051 Bacteria 4151
188 Ga0451576_0113863 3300045051 Bacteria 2815
189 Ga0495638_0002196 3300046460 Bacteria 16302
190 Ga0495674_0051174 3300047319 Bacteria 3642
191 Ga0496104_0014901 3300048907 Bacteria 7029
192 Ga0496106_0006325 3300048909 Bacteria 8773
193 Ga0496108_0004881 3300048911 Bacteria 10827
194 Ga0496109_0005504 3300048912 Bacteria 10606
195 Ga0496110_0002080 3300048913 Bacteria 14925
196 Ga0496110_0037365 3300048913 Bacteria 4221
197 Ga0496110_0097015 3300048913 Bacteria 2642
198 Ga0496112_0000862 3300048915 Bacteria 21705
199 Ga0496112_0005180 3300048915 Bacteria 11211
200 Ga0501032_0006083 3300049569 Bacteria 8894
201 Ga0501032_0008385 3300049569 Bacteria 7536
202 Ga0501032_0024407 3300049569 Bacteria 4175
203 Ga0501033_0012254 3300049570 Bacteria 6543
204 Ga0501033_0013539 3300049570 Bacteria 6209
205 Ga0501033_0068624 3300049570 Bacteria 2606
206 Ga0501034_0003754 3300049571 Bacteria 17154
207 Ga0501034_0006496 3300049571 Bacteria 12581
208 Ga0501034_0016816 3300049571 Bacteria 7499
209 Ga0501036_0022161 3300049572 Bacteria 5343
210 Ga0501036_0054308 3300049572 Bacteria 3393
211 Ga0501036_0057748 3300049572 Bacteria 3287
212 Ga0501036_0075104 3300049572 Bacteria 2859
213 Ga0501037_0049101 3300049573 Bacteria 3090
214 Ga0501037_0089209 3300049573 Bacteria 2231
215 Ga0501038_0006289 3300049574 Bacteria 10980
216 Ga0501038_0030406 3300049574 Bacteria 4780
217 Ga0501038_0038365 3300049574 Bacteria 4195
218 Ga0501039_0015378 3300049575 Bacteria 5858
219 Ga0501040_0003226 3300049576 Bacteria 10554
220 Ga0501041_0050698 3300049577 Bacteria 2530
221 Ga0501042_0013945 3300049578 Bacteria 5476
222 Ga0501042_0024127 3300049578 Bacteria 4264
223 Ga0501043_0018758 3300049579 Bacteria 5428
224 Ga0501043_0084615 3300049579 Bacteria 2493
225 Ga0501043_0089042 3300049579 Bacteria 2426
226 Ga0501046_0011489 3300049580 Bacteria 7570
227 Ga0501046_0013065 3300049580 Bacteria 7047
228 Ga0501046_0014889 3300049580 Bacteria 6545
229 Ga0501046_0037363 3300049580 Bacteria 3902
230 Ga0501047_0003404 3300049581 Bacteria 15062
231 Ga0501047_0022918 3300049581 Bacteria 5994
232 Ga0501047_0035052 3300049581 Bacteria 4846
233 Ga0501047_0039436 3300049581 Bacteria 4567
234 Ga0501048_0067708 3300049582 Bacteria 2523
235 Ga0501067_0018036 3300049583 Bacteria 3908
236 Ga0501068_0017350 3300049584 Bacteria 4163
237 Ga0501068_0035729 3300049584 Bacteria 2967
238 Ga0501068_0058320 3300049584 Bacteria 2342
239 Ga0501068_0059272 3300049584 Bacteria 2324
240 Ga0501071_0000390 3300049587 Bacteria 21604
241 Ga0501071_0026725 3300049587 Bacteria 4054
242 Ga0501072_0027126 3300049588 Bacteria 4469
243 Ga0501072_0036770 3300049588 Bacteria 3839
244 Ga0501072_0063831 3300049588 Bacteria 2905
245 Ga0501073_0002664 3300049589 Bacteria 13369
246 Ga0501073_0011024 3300049589 Bacteria 6612
247 Ga0501074_0016829 3300049590 Bacteria 5306
248 Ga0501074_0018485 3300049590 Bacteria 5064
249 Ga0501075_0091896 3300049591 Bacteria 2303
250 Ga0501076_0003804 3300049592 Bacteria 10625
251 Ga0501076_0015606 3300049592 Bacteria 5745
252 Ga0501077_0019262 3300049593 Bacteria 4315
253 Ga0501079_0014211 3300049741 Bacteria 6070
254 Ga0501079_0021208 3300049741 Bacteria 4968
255 Ga0501080_0018056 3300049742 Bacteria 6529
256 Ga0501080_0029413 3300049742 Bacteria 5114
257 Ga0501080_0034954 3300049742 Bacteria 4692
258 Ga0501081_0007014 3300049743 Bacteria 7326
259 Ga0501083_0013619 3300049744 Bacteria 5684
260 Ga0501083_0014262 3300049744 Bacteria 5558
261 Ga0501035_0037558 3300049822 Bacteria 4386
262 Ga0501044_0089522 3300049823 Bacteria 3106
263 Ga0501045_0002578 3300049824 Bacteria 12362
264 nmdc:mga05p37_111604_c1 3300050507 Bacteria 3362
265 nmdc:mga05p37_170_c1 3300050507 Bacteria 63401
266 nmdc:mga05p37_23890_c1 3300050507 Bacteria 7421
267 nmdc:mga05p37_2641_c1 3300050507 Bacteria 20872
268 nmdc:mga05p37_2791_c1 3300050507 Bacteria 20307
269 nmdc:mga05p37_2856_c1 3300050507 Bacteria 20057
270 nmdc:mga05p37_39762_c1 3300050507 Bacteria 5775
271 nmdc:mga05p37_49953_c1 3300050507 Bacteria 5144
272 nmdc:mga05p37_60100_c1 3300050507 Bacteria 4680
273 nmdc:mga05p37_6784_c1 3300050507 Bacteria 13495
274 nmdc:mga09592_19811_c1 3300050508 Bacteria 5526
275 nmdc:mga09592_2709_c1 3300050508 Bacteria 14317
276 nmdc:mga09592_38455_c1 3300050508 Bacteria 4017
277 nmdc:mga09592_48427_c1 3300050508 Bacteria 3583
278 nmdc:mga09592_69367_c1 3300050508 Bacteria 2990
279 nmdc:mga09592_8653_c1 3300050508 Bacteria 8282
280 nmdc:mga0qj67_1738_c1 3300050509 Bacteria 15392
281 nmdc:mga0qj67_1852_c1 3300050509 Bacteria 14982
282 nmdc:mga0qj67_23544_c1 3300050509 Bacteria 4738
283 nmdc:mga0qj67_30027_c1 3300050509 Bacteria 4227
284 nmdc:mga0qj67_37215_c1 3300050509 Bacteria 3811
285 nmdc:mga0qj67_49153_c1 3300050509 Bacteria 3334
286 nmdc:mga06r32_22957_c1 3300050510 Bacteria 5770
287 nmdc:mga06r32_26255_c1 3300050510 Bacteria 5428
288 nmdc:mga06r32_29323_c1 3300050510 Bacteria 5155
289 nmdc:mga06r32_6237_c1 3300050510 Bacteria 10704
290 nmdc:mga06r32_98529_c1 3300050510 Bacteria 2866
291 nmdc:mga08y16_113576_c1 3300050511 Bacteria 2820
292 nmdc:mga08y16_12926_c1 3300050511 Bacteria 8782
293 nmdc:mga08y16_1308_c1 3300050511 Bacteria 24769
294 nmdc:mga08y16_2122_c1 3300050511 Bacteria 20333
295 nmdc:mga08y16_21661_c1 3300050511 Bacteria 6786
296 nmdc:mga08y16_58554_c1 3300050511 Bacteria 4026
297 nmdc:mga08y16_6_c1 3300050511 Bacteria 622294
298 nmdc:mga08y16_900_c1 3300050511 Bacteria 28745
299 nmdc:mga0n895_10700_c1 3300050512 Bacteria 8127
300 nmdc:mga0n895_182_c1 3300050512 Bacteria 38722
301 nmdc:mga0n895_38125_c1 3300050512 Bacteria 4655
302 nmdc:mga0rr50_45_c1 3300050513 Bacteria 74544
303 nmdc:mga0rr50_4631_c1 3300050513 Bacteria 8104
304 nmdc:mga0rr50_48802_c1 3300050513 Bacteria 3131
305 nmdc:mga0rr50_54844_c1 3300050513 Bacteria 2971
306 nmdc:mga08x19_753_c1 3300050514 Bacteria 20724
307 nmdc:mga0a205_126_c1 3300050515 Bacteria 46787
308 nmdc:mga0a205_28262_c1 3300050515 Bacteria 4404
309 nmdc:mga0a205_30258_c1 3300050515 Bacteria 5183
310 Ga0495595_0020985 3300053084 Bacteria 2849
311 Ga0500555_001075 3300053103 Bacteria 9168
312 Ga0500568_0000786 3300053139 Bacteria 22387
313 Ga0500616_0000173 3300053153 Bacteria 107646
314 Ga0500645_000077 3300053730 Bacteria 77326
315 Ga0501084_0014562 3300054114 Bacteria 6520
316 Ga0501084_0020974 3300054114 Bacteria 5449
317 Ga0501084_0028862 3300054114 Bacteria 4639
318 Ga0590071_000033 3300059421 Bacteria 36708
319 Ga0590071_000733 3300059421 Bacteria 9197
320 Ga0590074_000102 3300059423 Bacteria 9560
321 Ga0590074_000822 3300059423 Bacteria 4799
322 Ga0590074_004182 3300059423 Bacteria 2383
323 Ga0590075_000232 3300059424 Bacteria 15676
324 Ga0590075_000510 3300059424 Bacteria 10525
325 Ga0590077_000045 3300059426 Bacteria 28616
326 Ga0590077_000191 3300059426 Bacteria 17585
327 Ga0590077_000345 3300059426 Bacteria 13170
328 Ga0501082_0001710 3300060353 Bacteria 19368
329 Ga0501082_0006507 3300060353 Bacteria 10128
330 Ga0501082_0008669 3300060353 Bacteria 8767
331 Ga0501082_0016563 3300060353 Bacteria 6345
332 Ga0530510_0002880 3300061734 Bacteria 11818
333 Ga0530510_0006222 3300061734 Bacteria 8301
334 nmdc:mga08y16_17415_c1
335 JGI24746J21847_1001182
336 JGI25406J46586_10004557
337 JGI25406J46586_10004875
338 Ga0065704_10100069
339 Ga0065715_10089889
340 Ga0065707_10001501
341 Ga0065707_10001533
342 Ga0070676_10027509
343 Ga0070683_100000059
344 Ga0070670_100024443
345 Ga0070670_100044041
346 Ga0070670_100091216
347 Ga0068868_100004716
348 Ga0070687_100001546
349 Ga0070669_100003696
350 Ga0070669_100017614
351 Ga0070674_100000892
352 Ga0070674_100002439
353 Ga0070674_100031618
354 Ga0070673_100004061
355 Ga0070688_100003720
356 Ga0070688_100010657
357 Ga0070667_100036983
358 Ga0070667_100040875
359 Ga0070714_100104389
360 Ga0070700_100003856
361 Ga0070678_100029233
362 Ga0070662_100011331
363 Ga0070685_10019259
364 Ga0070698_100039488
365 Ga0070699_100009771
366 Ga0070679_100066396
367 Ga0070684_100001140
368 Ga0070672_100013571
369 Ga0070693_100022997
370 Ga0070665_100004520
371 Ga0070665_100008933
372 Ga0070664_100003077
373 Ga0070664_100047409
374 Ga0068854_100044614
375 Ga0068859_100001016
376 Ga0068859_100018605
377 Ga0068859_100021410
378 Ga0068861_100067999
379 Ga0068870_10002913
380 Ga0068860_100001339
381 Ga0068860_100010327
382 Ga0068862_100005050
383 Ga0068862_100016509
384 Ga0068862_100040822
385 Ga0081538_10037715
386 Ga0081539_10000142
387 Ga0081539_10000215
388 Ga0081539_10005345
389 Ga0075363_100020227
390 Ga0075370_10030975
391 Ga0075428_100001164
392 Ga0075428_100002343
393 Ga0075428_100008098
394 Ga0075428_100009033
395 Ga0075428_100022166
396 Ga0075428_100024437
397 Ga0075428_100026495
398 Ga0075428_100030192
399 Ga0075430_100000059
400 Ga0075430_100001509
401 Ga0075430_100013891
402 Ga0075430_100044001
403 Ga0075431_100003164
404 Ga0075431_100003653
405 Ga0075431_100037639
406 Ga0075431_100057831
407 Ga0075431_100105389
408 Ga0075431_100119097
409 Ga0075434_100001575
410 Ga0075434_100002563
411 Ga0075434_100006154
412 Ga0075434_100042714
413 Ga0075429_100002792
414 Ga0075429_100067636
415 Ga0075429_100101812
416 Ga0068865_100011595
417 Ga0075436_100001140
418 Ga0075436_100017980
419 Ga0097620_100001016
420 Ga0097620_100018605
421 Ga0097620_100021408
422 Ga0075435_100000417
423 Ga0075435_100034538
424 Ga0075435_100036840
425 Ga0105240_10008866
426 Ga0111539_10000366
427 Ga0111539_10001426
428 Ga0111539_10003201
429 Ga0111539_10004274
430 Ga0111539_10006001
431 Ga0111539_10019442
432 Ga0111539_10025081
433 Ga0114129_10000145
434 Ga0114129_10000282
435 Ga0114129_10001770
436 Ga0114129_10002887
437 Ga0114129_10003147
438 Ga0114129_10004143
439 Ga0114129_10005131
440 Ga0114129_10012843
441 Ga0114129_10034579
442 Ga0114129_10039224
443 Ga0114129_10039617
444 Ga0114129_10080271
445 Ga0105248_10004004
446 Ga0105249_10000783
447 Ga0105249_10010653
448 Ga0157374_10026258
449 Ga0157378_10064506
450 Ga0163162_10001948
451 Ga0157375_10051084
452 Ga0157375_10074168
453 Ga0163163_10000013
454 Ga0163163_10015413
455 Ga0157380_10001715
456 Ga0157377_10006043
457 Ga0157376_10059092
458 Ga0207697_10000240
459 Ga0207697_10001073
460 Ga0207688_10001593
461 Ga0207645_10001097
462 Ga0207645_10013725
463 Ga0207695_10070570
464 Ga0207695_10087114
465 Ga0207662_10000781
466 Ga0207650_10061767
467 Ga0207659_10000700
468 Ga0207659_10024465
469 Ga0207659_10046987
470 Ga0207664_10040843
471 Ga0207690_10034322
472 Ga0207706_10035506
473 Ga0207669_10000421
474 Ga0207691_10021536
475 Ga0207711_10013018
476 Ga0207689_10017963
477 Ga0207689_10086065
478 Ga0207679_10001907
479 Ga0207679_10010258
480 Ga0207679_10021122
481 Ga0207651_10079750
482 Ga0207712_10011250
483 Ga0207712_10015796
484 Ga0207668_10073379
485 Ga0207640_10012335
486 Ga0207703_10014027
487 Ga0207708_10001958
488 Ga0207702_10048316
489 Ga0207648_10015104
490 Ga0207648_10062767
491 Ga0207674_10027034
492 Ga0207674_10044691
493 Ga0207675_100002045
494 Ga0207683_10002823
495 Ga0207683_10022834
496 Ga0207683_10024892
497 Ga0207428_10000294
498 Ga0207428_10000491
499 Ga0207428_10000600
500 Ga0207428_10001379
501 Ga0207428_10010698
502 Ga0207428_10016749
503 Ga0268265_10037927
504 Ga0268264_10001361
505 Ga0307405_10014519
506 Ga0307410_10005542
507 Ga0307409_100009347
508 Ga0307409_100038567
509 Ga0307409_100040909
510 Ga0307416_100068054
511 Ga0373953_0017726
512 Ga0373954_0011617
513 Ga0373957_0004574
514 Ga0373947_0023005
515 Ga0373937_0000965
516 Ga0373937_0001372
517 Ga0439464_0000051
518 Ga0451577_0032270
519 Ga0453684_0160228
520 Ga0451576_0055338
521 Ga0451576_0113863
522 Ga0495638_0002196
523 Ga0495674_0051174
524 Ga0496104_0014901
525 Ga0496106_0006325
526 Ga0496108_0004881
527 Ga0496109_0005504
528 Ga0496110_0002080
529 Ga0496110_0037365
530 Ga0496110_0097015
531 Ga0496112_0000862
532 Ga0496112_0005180
533 Ga0501032_0006083
534 Ga0501032_0008385
535 Ga0501032_0024407
536 Ga0501033_0012254
537 Ga0501033_0013539
538 Ga0501033_0068624
539 Ga0501034_0003754
540 Ga0501034_0006496
541 Ga0501034_0016816
542 Ga0501036_0022161
543 Ga0501036_0054308
544 Ga0501036_0057748
545 Ga0501036_0075104
546 Ga0501037_0049101
547 Ga0501037_0089209
548 Ga0501038_0006289
549 Ga0501038_0030406
550 Ga0501038_0038365
551 Ga0501039_0015378
552 Ga0501040_0003226
553 Ga0501041_0050698
554 Ga0501042_0013945
555 Ga0501042_0024127
556 Ga0501043_0018758
557 Ga0501043_0084615
558 Ga0501043_0089042
559 Ga0501046_0011489
560 Ga0501046_0013065
561 Ga0501046_0014889
562 Ga0501046_0037363
563 Ga0501047_0003404
564 Ga0501047_0022918
565 Ga0501047_0035052
566 Ga0501047_0039436
567 Ga0501048_0067708
568 Ga0501067_0018036
569 Ga0501068_0017350
570 Ga0501068_0035729
571 Ga0501068_0058320
572 Ga0501068_0059272
573 Ga0501071_0000390
574 Ga0501071_0026725
575 Ga0501072_0027126
576 Ga0501072_0036770
577 Ga0501072_0063831
578 Ga0501073_0002664
579 Ga0501073_0011024
580 Ga0501074_0016829
581 Ga0501074_0018485
582 Ga0501075_0091896
583 Ga0501076_0003804
584 Ga0501076_0015606
585 Ga0501077_0019262
586 Ga0501079_0014211
587 Ga0501079_0021208
588 Ga0501080_0018056
589 Ga0501080_0029413
590 Ga0501080_0034954
591 Ga0501081_0007014
592 Ga0501083_0013619
593 Ga0501083_0014262
594 Ga0501035_0037558
595 Ga0501044_0089522
596 Ga0501045_0002578
597 nmdc:mga05p37_111604_c1
598 nmdc:mga05p37_170_c1
599 nmdc:mga05p37_23890_c1
600 nmdc:mga05p37_2641_c1
601 nmdc:mga05p37_2791_c1
602 nmdc:mga05p37_2856_c1
603 nmdc:mga05p37_39762_c1
604 nmdc:mga05p37_49953_c1
605 nmdc:mga05p37_60100_c1
606 nmdc:mga05p37_6784_c1
607 nmdc:mga09592_19811_c1
608 nmdc:mga09592_2709_c1
609 nmdc:mga09592_38455_c1
610 nmdc:mga09592_48427_c1
611 nmdc:mga09592_69367_c1
612 nmdc:mga09592_8653_c1
613 nmdc:mga0qj67_1738_c1
614 nmdc:mga0qj67_1852_c1
615 nmdc:mga0qj67_23544_c1
616 nmdc:mga0qj67_30027_c1
617 nmdc:mga0qj67_37215_c1
618 nmdc:mga0qj67_49153_c1
619 nmdc:mga06r32_22957_c1
620 nmdc:mga06r32_26255_c1
621 nmdc:mga06r32_29323_c1
622 nmdc:mga06r32_6237_c1
623 nmdc:mga06r32_98529_c1
624 nmdc:mga08y16_113576_c1
625 nmdc:mga08y16_12926_c1
626 nmdc:mga08y16_1308_c1
627 nmdc:mga08y16_2122_c1
628 nmdc:mga08y16_21661_c1
629 nmdc:mga08y16_58554_c1
630 nmdc:mga08y16_6_c1
631 nmdc:mga08y16_900_c1
632 nmdc:mga0n895_10700_c1
633 nmdc:mga0n895_182_c1
634 nmdc:mga0n895_38125_c1
635 nmdc:mga0rr50_45_c1
636 nmdc:mga0rr50_4631_c1
637 nmdc:mga0rr50_48802_c1
638 nmdc:mga0rr50_54844_c1
639 nmdc:mga08x19_753_c1
640 nmdc:mga0a205_126_c1
641 nmdc:mga0a205_28262_c1
642 nmdc:mga0a205_30258_c1
643 Ga0495595_0020985
644 Ga0500555_001075
645 Ga0500568_0000786
646 Ga0500616_0000173
647 Ga0500645_000077
648 Ga0501084_0014562
649 Ga0501084_0020974
650 Ga0501084_0028862
651 Ga0590071_000033
652 Ga0590071_000733
653 Ga0590074_000102
654 Ga0590074_000822
655 Ga0590074_004182
656 Ga0590075_000232
657 Ga0590075_000510
658 Ga0590077_000045
659 Ga0590077_000191
660 Ga0590077_000345
661 Ga0501082_0001710
662 Ga0501082_0006507
663 Ga0501082_0008669
664 Ga0501082_0016563
665 Ga0530510_0002880
666 Ga0530510_0006222

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03725

RNase_PH_C

3' exoribonuclease family, domain 2

382

454

0.96

PF00575

S1

S1 RNA binding domain

543

615

0.95

PF01138

RNase_PH

3' exoribonuclease family, domain 1

246

379

0.94

PF01138

RNase_PH

3' exoribonuclease family, domain 1

9

141

0.94

PF03726

PNPase

Polyribonucleotide nucleotidyltransferase, RNA binding domain

173

243

0.94

PF00013

KH_1

KH domain

480

539

0.92

PF03725

RNase_PH_C

3' exoribonuclease family, domain 2

144

173

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2e3u-assembly1.cif.gz_A crystal structure analysis of dim2p from pyrococcus horikoshii ot3 0.9435 546 607
1dtj-assembly4.cif.gz_D crystal structure of nova-2 kh3 k-homology rna-binding domain 0.9394 544 605
1tua-assembly1.cif.gz_A 1.5 a crystal structure of a protein of unknown function ape0754 from aeropyrum pernix 0.9358 546 607
1dtj-assembly3.cif.gz_C crystal structure of nova-2 kh3 k-homology rna-binding domain 0.928 544 607
1ec6-assembly2.cif.gz_B crystal structure of nova-2 kh3 k-homology rna-binding domain bound to 20-mer rna hairpin 0.9266 545 608
ID Description Score Start End Superfamily
af_O59810_737_809_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.9667 546 608 3.30.1370.10
af_Q4CUW3_2_88_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.9642 548 608 3.30.1370.10
af_Q4DJP9_3_64_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.9629 548 607 3.30.1370.10
af_Q54Q48_195_260_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.9599 546 609 3.30.1370.10
af_Q8IJS7_871_948_3.30.1370.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;K Homology domain, type 1 0.9565 544 608 3.30.1370.10
ID Description Score Start End GO Terms
AF-A0A3D0P840-F1-model_v4 Polyribonucleotide nucleotidyltransferase 0.9734 119 191 GO:0000175
GO:0003723
GO:0004654
GO:0005829
GO:0006402
AF-A0A7K0F4U7-F1-model_v4 deleted 0.958 119 214
AF-A0A287I2L3-F1-model_v4 deleted 0.9522 104 248
AF-A0A287I2L3-F1-model_v4 deleted 0.9459 104 248
AF-A0A834SDL1-F1-model_v4 Putative polyribonucleotide nucleotidyltransferase 1, chloroplastic isoform X1 0.9442 119 192 GO:0000175
GO:0000958
GO:0000965
GO:0003723
GO:0004654
GO:0005739
GO:0005829
GO:0009570

Map