F411445

General Info

Members Datasets Scaffolds Average Seq Length
333 185 666 105

Family's Representative Sequence

Representative Sequence 3300037466|Ga0395898_0102829|Ga0395898_0102829_1245_1619
Length 124
Sequence MVGHLSFLPLFAFASAYIVSKMANDPFKALAHPLRRDIVERLSGGTATVGEVTRDFGVSKPTISRHLKMLEEAGVVSRVIDGRTHRLALRPEALAETSDWIESQRARWERLFDVVGEYLEERKE

Samples

Sample ID Description Type Environment
1 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
88 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
89 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
90 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
104 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
105 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
106 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
107 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
108 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
109 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
110 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
114 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
118 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
119 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
123 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
124 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
125 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
128 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
129 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
139 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
140 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
141 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
145 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
148 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
149 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
150 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
151 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
152 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
166 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
167 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
168 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
169 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
170 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
174 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
182 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
183 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
184 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
185 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.5
Nodule 0
Rhizoplane 10.21
Rhizosphere 81.38
Stem 0
Stem Tuber 0
Unclassified 19.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395898_0102829 3300037466 Bacteria 2742
2 JGI24743J22301_10044443 3300001991 Bacteria 896
3 JGI25407J50210_10044634 3300003373 Bacteria 1131
4 Ga0070683_100014477 3300005329 Bacteria 6900
5 Ga0070683_100572643 3300005329 Bacteria 1080
6 Ga0070670_101116784 3300005331 Bacteria 719
7 Ga0068869_101127034 3300005334 Bacteria 687
8 Ga0070660_101457489 3300005339 Bacteria 582
9 Ga0070691_10458529 3300005341 Bacteria 729
10 Ga0070674_100172376 3300005356 Unclassified 1651
11 Ga0070714_100838526 3300005435 Bacteria 891
12 Ga0070714_100987932 3300005435 Bacteria 819
13 Ga0070714_102360049 3300005435 Bacteria 517
14 Ga0070711_100195144 3300005439 Bacteria 1559
15 Ga0070694_101636816 3300005444 Unclassified 547
16 Ga0070708_100038991 3300005445 Bacteria 4154
17 Ga0070708_100199689 3300005445 Bacteria 1872
18 Ga0070708_100337158 3300005445 Bacteria 1421
19 Ga0070708_100809551 3300005445 Bacteria 880
20 Ga0070678_100024606 3300005456 Bacteria 4036
21 Ga0070678_101270836 3300005456 Bacteria 684
22 Ga0070685_10107233 3300005466 Bacteria 1715
23 Ga0070685_10123538 3300005466 Unclassified 1610
24 Ga0070706_100003466 3300005467 Bacteria 15529
25 Ga0070706_100616167 3300005467 Bacteria 1008
26 Ga0070698_100219999 3300005471 Bacteria 1833
27 Ga0070698_100280937 3300005471 Bacteria 1596
28 Ga0070698_101109518 3300005471 Unclassified 740
29 Ga0070699_100757448 3300005518 Bacteria 888
30 Ga0070699_101048132 3300005518 Bacteria 748
31 Ga0070679_100523873 3300005530 Bacteria 1129
32 Ga0070697_100062086 3300005536 Bacteria 3048
33 Ga0070686_100296915 3300005544 Bacteria 1197
34 Ga0070686_100807113 3300005544 Bacteria 757
35 Ga0070695_100089313 3300005545 Bacteria 2054
36 Ga0070696_100632815 3300005546 Unclassified 866
37 Ga0070696_101707359 3300005546 Bacteria 543
38 Ga0070696_101724535 3300005546 Bacteria 540
39 Ga0070693_100444896 3300005547 Unclassified 908
40 Ga0070704_100084075 3300005549 Bacteria 2352
41 Ga0070704_100448825 3300005549 Bacteria 1110
42 Ga0070704_101465656 3300005549 Bacteria 627
43 Ga0068855_102506284 3300005563 Unclassified 513
44 Ga0068856_101982707 3300005614 Bacteria 593
45 Ga0068856_102690414 3300005614 Bacteria 503
46 Ga0081455_10018921 3300005937 Bacteria 6534
47 Ga0081455_10050447 3300005937 Bacteria 3578
48 Ga0081455_10158086 3300005937 Bacteria 1740
49 Ga0081455_10388447 3300005937 Bacteria 973
50 Ga0081538_10014141 3300005981 Bacteria 6269
51 Ga0070717_10736423 3300006028 Bacteria 896
52 Ga0070717_11369485 3300006028 Bacteria 643
53 Ga0075365_10027942 3300006038 Bacteria 3593
54 Ga0075368_10026646 3300006042 Bacteria 2224
55 Ga0075368_10163531 3300006042 Bacteria 933
56 Ga0075363_100893574 3300006048 Bacteria 544
57 Ga0075364_10211637 3300006051 Bacteria 1315
58 Ga0075364_10305522 3300006051 Bacteria 1083
59 Ga0070712_100559868 3300006175 Unclassified 964
60 Ga0070712_101021074 3300006175 Bacteria 716
61 Ga0070712_101765290 3300006175 Bacteria 542
62 Ga0075367_10063080 3300006178 Bacteria 2215
63 Ga0068871_100822983 3300006358 Bacteria 857
64 Ga0075431_100125412 3300006847 Bacteria 2650
65 Ga0075433_11138444 3300006852 Bacteria 678
66 Ga0075434_100030794 3300006871 Bacteria 5286
67 Ga0075436_100320939 3300006914 Bacteria 1113
68 Ga0075436_100390089 3300006914 Unclassified 1008
69 Ga0075435_100393146 3300007076 Bacteria 1192
70 Ga0075435_100832104 3300007076 Bacteria 804
71 Ga0105245_10042430 3300009098 Bacteria 4059
72 Ga0105245_10128170 3300009098 Bacteria 2377
73 Ga0105245_10181281 3300009098 Bacteria 2012
74 Ga0105245_11316946 3300009098 Bacteria 771
75 Ga0105245_11370853 3300009098 Bacteria 757
76 Ga0114129_10405300 3300009147 Bacteria 1796
77 Ga0114129_10483907 3300009147 Bacteria 1619
78 Ga0114129_10810069 3300009147 Unclassified 1194
79 Ga0114129_11949747 3300009147 Bacteria 711
80 Ga0105243_10146141 3300009148 Bacteria 2023
81 Ga0105243_11567840 3300009148 Bacteria 684
82 Ga0105243_12066711 3300009148 Bacteria 605
83 Ga0105241_12026578 3300009174 Unclassified 567
84 Ga0105242_10131750 3300009176 Bacteria 2159
85 Ga0105248_10368215 3300009177 Unclassified 1618
86 Ga0105249_10316385 3300009553 Bacteria 1571
87 Ga0105249_11268399 3300009553 Bacteria 808
88 Ga0105249_11910465 3300009553 Bacteria 666
89 Ga0105239_10134508 3300010375 Bacteria 2752
90 Ga0105239_11168113 3300010375 Bacteria 887
91 Ga0105239_11275386 3300010375 Unclassified 847
92 Ga0105239_12304926 3300010375 Unclassified 627
93 Ga0157370_11507727 3300013104 Bacteria 604
94 Ga0157369_10513848 3300013105 Bacteria 1239
95 Ga0157369_10766929 3300013105 Bacteria 992
96 Ga0157374_10315777 3300013296 Bacteria 1548
97 Ga0157374_11948896 3300013296 Bacteria 613
98 Ga0157378_12654489 3300013297 Bacteria 553
99 Ga0157378_13297734 3300013297 Unclassified 501
100 Ga0157372_11981619 3300013307 Bacteria 669
101 Ga0157372_12134718 3300013307 Unclassified 644
102 Ga0157375_11808121 3300013308 Bacteria 724
103 Ga0163163_11434359 3300014325 Unclassified 752
104 Ga0157379_10219937 3300014968 Unclassified 1721
105 Ga0157376_10618740 3300014969 Bacteria 1080
106 Ga0213876_10026528 3300021384 Bacteria 3055
107 Ga0213876_10045547 3300021384 Unclassified 2319
108 Ga0213876_10373340 3300021384 Unclassified 758
109 Ga0207642_10218808 3300025899 Bacteria 1063
110 Ga0207684_10410911 3300025910 Bacteria 1163
111 Ga0207707_10435094 3300025912 Bacteria 1123
112 Ga0207693_10011989 3300025915 Bacteria 7009
113 Ga0207693_10503018 3300025915 Unclassified 946
114 Ga0207663_10775849 3300025916 Bacteria 762
115 Ga0207662_10065771 3300025918 Bacteria 2184
116 Ga0207652_10441342 3300025921 Bacteria 1173
117 Ga0207652_10684497 3300025921 Bacteria 916
118 Ga0207646_10791702 3300025922 Bacteria 845
119 Ga0207650_10868160 3300025925 Unclassified 766
120 Ga0207687_10137991 3300025927 Bacteria 1846
121 Ga0207687_11829105 3300025927 Bacteria 520
122 Ga0207664_11698811 3300025929 Bacteria 554
123 Ga0207690_10940917 3300025932 Bacteria 718
124 Ga0207686_10445276 3300025934 Bacteria 995
125 Ga0207704_10194186 3300025938 Bacteria 1479
126 Ga0207711_10975933 3300025941 Bacteria 786
127 Ga0207661_10004448 3300025944 Bacteria 9843
128 Ga0207661_10014427 3300025944 Bacteria 5792
129 Ga0207667_11719493 3300025949 Unclassified 593
130 Ga0207712_10799530 3300025961 Unclassified 829
131 Ga0207668_10313133 3300025972 Unclassified 1300
132 Ga0207668_11162830 3300025972 Bacteria 693
133 Ga0207640_10640213 3300025981 Bacteria 905
134 Ga0207708_11070107 3300026075 Bacteria 702
135 Ga0207702_12082233 3300026078 Bacteria 557
136 Ga0207683_10015782 3300026121 Bacteria 6428
137 Ga0207698_11296088 3300026142 Bacteria 743
138 Ga0209813_10084098 3300027866 Unclassified 1057
139 Ga0307406_11986338 3300031901 Bacteria 520
140 Ga0307409_101086523 3300031995 Bacteria 821
141 Ga0373945_0291442 3300035116 Unclassified 697
142 Ga0373954_0338497 3300035118 Bacteria 743
143 Ga0373943_0108452 3300035170 Bacteria 1461
144 Ga0373943_0326206 3300035170 Unclassified 876
145 Ga0373943_0516996 3300035170 Bacteria 699
146 Ga0373935_0680295 3300035692 Bacteria 756
147 Ga0373933_0264827 3300035724 Bacteria 1109
148 Ga0373933_0490243 3300035724 Bacteria 805
149 Ga0373947_0226000 3300035725 Bacteria 1232
150 Ga0373947_1162633 3300035725 Unclassified 526
151 Ga0373937_0273742 3300036401 Bacteria 1594
152 Ga0395899_0010844 3300037312 Bacteria 6985
153 Ga0395899_0031156 3300037312 Bacteria 4008
154 Ga0395899_0197464 3300037312 Bacteria 1405
155 Ga0395900_0010756 3300037418 Bacteria 9360
156 Ga0395900_0017725 3300037418 Bacteria 7267
157 Ga0395900_0255736 3300037418 Bacteria 1751
158 Ga0395900_0360212 3300037418 Bacteria 1426
159 Ga0395900_0814540 3300037418 Unclassified 861
160 Ga0395900_1010578 3300037418 Bacteria 751
161 Ga0395900_1434113 3300037418 Bacteria 603
162 Ga0395900_1924509 3300037418 Bacteria 502
163 Ga0395898_0004659 3300037466 Bacteria 14948
164 Ga0395898_0012301 3300037466 Bacteria 8850
165 Ga0395898_0031187 3300037466 Bacteria 5329
166 Ga0395898_0211458 3300037466 Unclassified 1850
167 Ga0395898_0543297 3300037466 Bacteria 1104
168 Ga0395898_0765960 3300037466 Bacteria 906
169 Ga0395898_1060602 3300037466 Bacteria 745
170 Ga0395898_1083210 3300037466 Bacteria 735
171 Ga0395905_0011174 3300037471 Bacteria 8679
172 Ga0395905_0015319 3300037471 Bacteria 7287
173 Ga0395905_1675169 3300037471 Unclassified 541
174 Ga0436364_0597082 3300037853 Bacteria 965
175 Ga0436364_0620883 3300037853 Bacteria 758
176 Ga0395901_0024314 3300038443 Bacteria 6216
177 Ga0395901_0047604 3300038443 Bacteria 4452
178 Ga0395901_0068909 3300038443 Bacteria 3684
179 Ga0395901_0116454 3300038443 Bacteria 2807
180 Ga0395901_0160141 3300038443 Unclassified 2364
181 Ga0395901_0509003 3300038443 Bacteria 1225
182 Ga0395901_0704900 3300038443 Bacteria 1007
183 Ga0395901_0813626 3300038443 Bacteria 922
184 Ga0395901_1301367 3300038443 Unclassified 689
185 Ga0242420_028583 3300038996 Unclassified 1027
186 Ga0436365_1290693 3300039437 Bacteria 14319
187 Ga0436365_1651090 3300039437 Bacteria 3590
188 Ga0436365_1778806 3300039437 Bacteria 1202
189 Ga0436363_0674274 3300039450 Bacteria 625
190 Ga0451804_1139121 3300041463 Unclassified 621
191 Ga0451845_0146352 3300041501 Archaea 610
192 Ga0451849_0925526 3300041505 Bacteria 1152
193 Ga0451843_1491418 3300041509 Bacteria 782
194 Ga0451853_3326903 3300041512 Bacteria 590
195 Ga0439460_0259392 3300042461 Bacteria 602
196 Ga0466969_0453909 3300044656 Unclassified 583
197 Ga0466965_0233040 3300044683 Bacteria 984
198 Ga0466961_0197092 3300044693 Bacteria 1247
199 Ga0466963_0092363 3300044694 Bacteria 2062
200 Ga0466963_0177718 3300044694 Bacteria 1485
201 Ga0466964_0041187 3300044706 Bacteria 1867
202 Ga0466968_0032284 3300044735 Bacteria 2177
203 Ga0466970_0628276 3300044765 Unclassified 624
204 Ga0466957_0140432 3300044842 Bacteria 1556
205 Ga0466960_0042629 3300044901 Bacteria 2155
206 Ga0466960_0171958 3300044901 Bacteria 1170
207 Ga0466959_0053570 3300045049 Bacteria 2949
208 Ga0466959_0368361 3300045049 Bacteria 978
209 Ga0466958_0069857 3300045836 Bacteria 2148
210 Ga0466958_0423736 3300045836 Unclassified 860
211 Ga0466967_0002725 3300045976 Bacteria 11166
212 Ga0466967_0025812 3300045976 Bacteria 4851
213 Ga0466967_0063867 3300045976 Bacteria 3273
214 Ga0466967_0066238 3300045976 Bacteria 3218
215 Ga0466967_0299550 3300045976 Bacteria 1547
216 Ga0466967_0549946 3300045976 Unclassified 1136
217 Ga0466967_0699710 3300045976 Unclassified 1004
218 Ga0466967_0726789 3300045976 Bacteria 984
219 Ga0466967_0731674 3300045976 Bacteria 981
220 Ga0466967_1305575 3300045976 Bacteria 723
221 Ga0466967_1617732 3300045976 Unclassified 645
222 Ga0495592_0662907 3300046454 Bacteria 631
223 Ga0495603_0051509 3300046455 Bacteria 2446
224 Ga0495641_0035384 3300046461 Bacteria 2355
225 Ga0495641_0105351 3300046461 Unclassified 1258
226 Ga0495641_0600295 3300046461 Bacteria 503
227 Ga0495651_0489388 3300046462 Bacteria 789
228 Ga0495582_0420393 3300046473 Unclassified 771
229 Ga0495664_0478786 3300046477 Bacteria 744
230 Ga0495594_0378440 3300046499 Bacteria 806
231 Ga0495596_0350536 3300046500 Unclassified 575
232 Ga0495608_0000056 3300046511 Bacteria 91026
233 Ga0495628_0090833 3300046516 Bacteria 2364
234 Ga0495630_0000550 3300046517 Bacteria 27402
235 Ga0495630_0354486 3300046517 Unclassified 1123
236 Ga0495652_0272022 3300046529 Bacteria 1245
237 Ga0495652_1068963 3300046529 Bacteria 525
238 Ga0495640_0703982 3300046533 Bacteria 606
239 Ga0495622_0465333 3300046557 Unclassified 542
240 Ga0495667_0677764 3300046559 Bacteria 640
241 Ga0495634_0046029 3300046642 Bacteria 2946
242 Ga0495634_0670671 3300046642 Bacteria 598
243 Ga0495635_0027355 3300046663 Bacteria 3967
244 Ga0495635_1098407 3300046663 Unclassified 503
245 Ga0495588_0528831 3300046674 Unclassified 618
246 Ga0495588_0777769 3300046674 Unclassified 500
247 Ga0495657_0000023 3300046675 Bacteria 145522
248 Ga0495657_0271886 3300046675 Bacteria 1016
249 Ga0495599_0388740 3300046678 Bacteria 832
250 Ga0495599_0540857 3300046678 Bacteria 683
251 Ga0495647_0371013 3300046681 Bacteria 654
252 Ga0495658_0583035 3300046683 Bacteria 716
253 Ga0495624_0121706 3300046690 Bacteria 1602
254 Ga0495670_0399627 3300046691 Unclassified 742
255 Ga0495600_0086109 3300046809 Bacteria 2050
256 Ga0495581_0323611 3300047315 Unclassified 901
257 Ga0495604_0380152 3300047317 Bacteria 933
258 Ga0495676_0098555 3300047321 Bacteria 2168
259 Ga0495676_0354315 3300047321 Bacteria 980
260 Ga0495676_0427649 3300047321 Unclassified 876
261 Ga0495680_0420048 3300047322 Bacteria 920
262 Ga0495675_0000039 3300047444 Bacteria 91025
263 Ga0495602_1143507 3300048088 Unclassified 509
264 Ga0496100_0038462 3300048903 Bacteria 3032
265 Ga0496100_0472359 3300048903 Bacteria 964
266 Ga0496100_0897155 3300048903 Bacteria 696
267 Ga0496101_0086961 3300048904 Bacteria 2319
268 Ga0496102_0718308 3300048905 Bacteria 922
269 Ga0496102_1346646 3300048905 Bacteria 633
270 Ga0496103_0036937 3300048906 Bacteria 2993
271 Ga0496103_0927788 3300048906 Bacteria 545
272 Ga0496104_0033092 3300048907 Bacteria 4812
273 Ga0496105_0052578 3300048908 Bacteria 3364
274 Ga0496105_1048272 3300048908 Unclassified 608
275 Ga0496106_0149047 3300048909 Bacteria 1844
276 Ga0496107_0028486 3300048910 Bacteria 3969
277 Ga0496107_0234293 3300048910 Bacteria 1366
278 Ga0496107_0922249 3300048910 Unclassified 636
279 Ga0496108_0011046 3300048911 Bacteria 7332
280 Ga0496109_0017305 3300048912 Bacteria 6314
281 Ga0496109_0196166 3300048912 Bacteria 1898
282 Ga0496109_0264676 3300048912 Bacteria 1620
283 Ga0496110_0137128 3300048913 Bacteria 2211
284 Ga0496110_0178332 3300048913 Bacteria 1929
285 Ga0496110_0298158 3300048913 Bacteria 1468
286 Ga0496111_0090749 3300048914 Bacteria 2238
287 Ga0496111_0318040 3300048914 Bacteria 1153
288 Ga0496112_0018924 3300048915 Bacteria 6489
289 Ga0496112_0564042 3300048915 Bacteria 1072
290 Ga0496112_1846640 3300048915 Unclassified 516
291 Ga0496113_0028224 3300048916 Bacteria 4033
292 Ga0496113_0250609 3300048916 Bacteria 1414
293 Ga0496113_1190927 3300048916 Unclassified 595
294 Ga0496114_0044808 3300048917 Bacteria 3672
295 Ga0496114_0254010 3300048917 Unclassified 1547
296 Ga0496115_0087631 3300048918 Bacteria 2540
297 Ga0501068_0056770 3300049584 Bacteria 2373
298 Ga0501069_0543180 3300049585 Unclassified 695
299 nmdc:mga03n38_894276_c1 3300050490 Unclassified 521
300 nmdc:mga00v17_178385_c1 3300050491 Bacteria 1370
301 nmdc:mga00v17_350990_c1 3300050491 Bacteria 959
302 nmdc:mga0yw44_12333_c1 3300050492 Bacteria 4450
303 nmdc:mga0yw44_4480_c1 3300050492 Bacteria 6412
304 nmdc:mga06z11_45048_c1 3300050494 Bacteria 2228
305 nmdc:mga04h51_59426_c1 3300050495 Bacteria 1306
306 nmdc:mga05p37_1285307_c1 3300050507 Bacteria 747
307 nmdc:mga05p37_1380674_c1 3300050507 Bacteria 711
308 nmdc:mga05p37_283314_c1 3300050507 Bacteria 1975
309 nmdc:mga0n895_1086445_c1 3300050512 Bacteria 778
310 nmdc:mga0n895_2098275_c1 3300050512 Unclassified 522
311 nmdc:mga0n895_225327_c1 3300050512 Bacteria 1903
312 nmdc:mga0n895_266621_c1 3300050512 Bacteria 1737
313 nmdc:mga0rr50_1672677_c1 3300050513 Unclassified 537
314 nmdc:mga0rr50_702308_c1 3300050513 Bacteria 863
315 nmdc:mga08x19_1018560_c1 3300050514 Unclassified 588
316 nmdc:mga0a205_395838_c1 3300050515 Bacteria 1245
317 nmdc:mga0a205_993022_c1 3300050515 Bacteria 686
318 Ga0495601_0005493 3300053077 Bacteria 7390
319 Ga0495601_0029546 3300053077 Bacteria 3401
320 Ga0495601_0047010 3300053077 Bacteria 2716
321 Ga0495601_0120279 3300053077 Bacteria 1705
322 Ga0495612_0000227 3300053078 Bacteria 23843
323 Ga0495655_0001108 3300053083 Bacteria 4178
324 Ga0495595_0000029 3300053084 Bacteria 91026
325 Ga0495595_0109917 3300053084 Bacteria 1336
326 Ga0495619_0000029 3300053085 Bacteria 158166
327 Ga0495619_0002067 3300053085 Bacteria 13336
328 Ga0495619_0006620 3300053085 Bacteria 7332
329 Ga0495619_0008161 3300053085 Bacteria 6627
330 Ga0495619_0330211 3300053085 Bacteria 1056
331 Ga0495619_0648763 3300053085 Bacteria 720
332 Ga0495619_0704709 3300053085 Bacteria 686
333 Ga0466962_0027834 3300061719 Bacteria 2710
334 Ga0395898_0102829
335 JGI24743J22301_10044443
336 JGI25407J50210_10044634
337 Ga0070683_100014477
338 Ga0070683_100572643
339 Ga0070670_101116784
340 Ga0068869_101127034
341 Ga0070660_101457489
342 Ga0070691_10458529
343 Ga0070674_100172376
344 Ga0070714_100838526
345 Ga0070714_100987932
346 Ga0070714_102360049
347 Ga0070711_100195144
348 Ga0070694_101636816
349 Ga0070708_100038991
350 Ga0070708_100199689
351 Ga0070708_100337158
352 Ga0070708_100809551
353 Ga0070678_100024606
354 Ga0070678_101270836
355 Ga0070685_10107233
356 Ga0070685_10123538
357 Ga0070706_100003466
358 Ga0070706_100616167
359 Ga0070698_100219999
360 Ga0070698_100280937
361 Ga0070698_101109518
362 Ga0070699_100757448
363 Ga0070699_101048132
364 Ga0070679_100523873
365 Ga0070697_100062086
366 Ga0070686_100296915
367 Ga0070686_100807113
368 Ga0070695_100089313
369 Ga0070696_100632815
370 Ga0070696_101707359
371 Ga0070696_101724535
372 Ga0070693_100444896
373 Ga0070704_100084075
374 Ga0070704_100448825
375 Ga0070704_101465656
376 Ga0068855_102506284
377 Ga0068856_101982707
378 Ga0068856_102690414
379 Ga0081455_10018921
380 Ga0081455_10050447
381 Ga0081455_10158086
382 Ga0081455_10388447
383 Ga0081538_10014141
384 Ga0070717_10736423
385 Ga0070717_11369485
386 Ga0075365_10027942
387 Ga0075368_10026646
388 Ga0075368_10163531
389 Ga0075363_100893574
390 Ga0075364_10211637
391 Ga0075364_10305522
392 Ga0070712_100559868
393 Ga0070712_101021074
394 Ga0070712_101765290
395 Ga0075367_10063080
396 Ga0068871_100822983
397 Ga0075431_100125412
398 Ga0075433_11138444
399 Ga0075434_100030794
400 Ga0075436_100320939
401 Ga0075436_100390089
402 Ga0075435_100393146
403 Ga0075435_100832104
404 Ga0105245_10042430
405 Ga0105245_10128170
406 Ga0105245_10181281
407 Ga0105245_11316946
408 Ga0105245_11370853
409 Ga0114129_10405300
410 Ga0114129_10483907
411 Ga0114129_10810069
412 Ga0114129_11949747
413 Ga0105243_10146141
414 Ga0105243_11567840
415 Ga0105243_12066711
416 Ga0105241_12026578
417 Ga0105242_10131750
418 Ga0105248_10368215
419 Ga0105249_10316385
420 Ga0105249_11268399
421 Ga0105249_11910465
422 Ga0105239_10134508
423 Ga0105239_11168113
424 Ga0105239_11275386
425 Ga0105239_12304926
426 Ga0157370_11507727
427 Ga0157369_10513848
428 Ga0157369_10766929
429 Ga0157374_10315777
430 Ga0157374_11948896
431 Ga0157378_12654489
432 Ga0157378_13297734
433 Ga0157372_11981619
434 Ga0157372_12134718
435 Ga0157375_11808121
436 Ga0163163_11434359
437 Ga0157379_10219937
438 Ga0157376_10618740
439 Ga0213876_10026528
440 Ga0213876_10045547
441 Ga0213876_10373340
442 Ga0207642_10218808
443 Ga0207684_10410911
444 Ga0207707_10435094
445 Ga0207693_10011989
446 Ga0207693_10503018
447 Ga0207663_10775849
448 Ga0207662_10065771
449 Ga0207652_10441342
450 Ga0207652_10684497
451 Ga0207646_10791702
452 Ga0207650_10868160
453 Ga0207687_10137991
454 Ga0207687_11829105
455 Ga0207664_11698811
456 Ga0207690_10940917
457 Ga0207686_10445276
458 Ga0207704_10194186
459 Ga0207711_10975933
460 Ga0207661_10004448
461 Ga0207661_10014427
462 Ga0207667_11719493
463 Ga0207712_10799530
464 Ga0207668_10313133
465 Ga0207668_11162830
466 Ga0207640_10640213
467 Ga0207708_11070107
468 Ga0207702_12082233
469 Ga0207683_10015782
470 Ga0207698_11296088
471 Ga0209813_10084098
472 Ga0307406_11986338
473 Ga0307409_101086523
474 Ga0373945_0291442
475 Ga0373954_0338497
476 Ga0373943_0108452
477 Ga0373943_0326206
478 Ga0373943_0516996
479 Ga0373935_0680295
480 Ga0373933_0264827
481 Ga0373933_0490243
482 Ga0373947_0226000
483 Ga0373947_1162633
484 Ga0373937_0273742
485 Ga0395899_0010844
486 Ga0395899_0031156
487 Ga0395899_0197464
488 Ga0395900_0010756
489 Ga0395900_0017725
490 Ga0395900_0255736
491 Ga0395900_0360212
492 Ga0395900_0814540
493 Ga0395900_1010578
494 Ga0395900_1434113
495 Ga0395900_1924509
496 Ga0395898_0004659
497 Ga0395898_0012301
498 Ga0395898_0031187
499 Ga0395898_0211458
500 Ga0395898_0543297
501 Ga0395898_0765960
502 Ga0395898_1060602
503 Ga0395898_1083210
504 Ga0395905_0011174
505 Ga0395905_0015319
506 Ga0395905_1675169
507 Ga0436364_0597082
508 Ga0436364_0620883
509 Ga0395901_0024314
510 Ga0395901_0047604
511 Ga0395901_0068909
512 Ga0395901_0116454
513 Ga0395901_0160141
514 Ga0395901_0509003
515 Ga0395901_0704900
516 Ga0395901_0813626
517 Ga0395901_1301367
518 Ga0242420_028583
519 Ga0436365_1290693
520 Ga0436365_1651090
521 Ga0436365_1778806
522 Ga0436363_0674274
523 Ga0451804_1139121
524 Ga0451845_0146352
525 Ga0451849_0925526
526 Ga0451843_1491418
527 Ga0451853_3326903
528 Ga0439460_0259392
529 Ga0466969_0453909
530 Ga0466965_0233040
531 Ga0466961_0197092
532 Ga0466963_0092363
533 Ga0466963_0177718
534 Ga0466964_0041187
535 Ga0466968_0032284
536 Ga0466970_0628276
537 Ga0466957_0140432
538 Ga0466960_0042629
539 Ga0466960_0171958
540 Ga0466959_0053570
541 Ga0466959_0368361
542 Ga0466958_0069857
543 Ga0466958_0423736
544 Ga0466967_0002725
545 Ga0466967_0025812
546 Ga0466967_0063867
547 Ga0466967_0066238
548 Ga0466967_0299550
549 Ga0466967_0549946
550 Ga0466967_0699710
551 Ga0466967_0726789
552 Ga0466967_0731674
553 Ga0466967_1305575
554 Ga0466967_1617732
555 Ga0495592_0662907
556 Ga0495603_0051509
557 Ga0495641_0035384
558 Ga0495641_0105351
559 Ga0495641_0600295
560 Ga0495651_0489388
561 Ga0495582_0420393
562 Ga0495664_0478786
563 Ga0495594_0378440
564 Ga0495596_0350536
565 Ga0495608_0000056
566 Ga0495628_0090833
567 Ga0495630_0000550
568 Ga0495630_0354486
569 Ga0495652_0272022
570 Ga0495652_1068963
571 Ga0495640_0703982
572 Ga0495622_0465333
573 Ga0495667_0677764
574 Ga0495634_0046029
575 Ga0495634_0670671
576 Ga0495635_0027355
577 Ga0495635_1098407
578 Ga0495588_0528831
579 Ga0495588_0777769
580 Ga0495657_0000023
581 Ga0495657_0271886
582 Ga0495599_0388740
583 Ga0495599_0540857
584 Ga0495647_0371013
585 Ga0495658_0583035
586 Ga0495624_0121706
587 Ga0495670_0399627
588 Ga0495600_0086109
589 Ga0495581_0323611
590 Ga0495604_0380152
591 Ga0495676_0098555
592 Ga0495676_0354315
593 Ga0495676_0427649
594 Ga0495680_0420048
595 Ga0495675_0000039
596 Ga0495602_1143507
597 Ga0496100_0038462
598 Ga0496100_0472359
599 Ga0496100_0897155
600 Ga0496101_0086961
601 Ga0496102_0718308
602 Ga0496102_1346646
603 Ga0496103_0036937
604 Ga0496103_0927788
605 Ga0496104_0033092
606 Ga0496105_0052578
607 Ga0496105_1048272
608 Ga0496106_0149047
609 Ga0496107_0028486
610 Ga0496107_0234293
611 Ga0496107_0922249
612 Ga0496108_0011046
613 Ga0496109_0017305
614 Ga0496109_0196166
615 Ga0496109_0264676
616 Ga0496110_0137128
617 Ga0496110_0178332
618 Ga0496110_0298158
619 Ga0496111_0090749
620 Ga0496111_0318040
621 Ga0496112_0018924
622 Ga0496112_0564042
623 Ga0496112_1846640
624 Ga0496113_0028224
625 Ga0496113_0250609
626 Ga0496113_1190927
627 Ga0496114_0044808
628 Ga0496114_0254010
629 Ga0496115_0087631
630 Ga0501068_0056770
631 Ga0501069_0543180
632 nmdc:mga03n38_894276_c1
633 nmdc:mga00v17_178385_c1
634 nmdc:mga00v17_350990_c1
635 nmdc:mga0yw44_12333_c1
636 nmdc:mga0yw44_4480_c1
637 nmdc:mga06z11_45048_c1
638 nmdc:mga04h51_59426_c1
639 nmdc:mga05p37_1285307_c1
640 nmdc:mga05p37_1380674_c1
641 nmdc:mga05p37_283314_c1
642 nmdc:mga0n895_1086445_c1
643 nmdc:mga0n895_2098275_c1
644 nmdc:mga0n895_225327_c1
645 nmdc:mga0n895_266621_c1
646 nmdc:mga0rr50_1672677_c1
647 nmdc:mga0rr50_702308_c1
648 nmdc:mga08x19_1018560_c1
649 nmdc:mga0a205_395838_c1
650 nmdc:mga0a205_993022_c1
651 Ga0495601_0005493
652 Ga0495601_0029546
653 Ga0495601_0047010
654 Ga0495601_0120279
655 Ga0495612_0000227
656 Ga0495655_0001108
657 Ga0495595_0000029
658 Ga0495595_0109917
659 Ga0495619_0000029
660 Ga0495619_0002067
661 Ga0495619_0006620
662 Ga0495619_0008161
663 Ga0495619_0330211
664 Ga0495619_0648763
665 Ga0495619_0704709
666 Ga0466962_0027834

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01022

HTH_5

Bacterial regulatory protein, arsR family

32

78

0.97

PF12840

HTH_20

Helix-turn-helix domain

30

79

0.97

PF12802

MarR_2

MarR family

37

87

0.89

PF08220

HTH_DeoR

DeoR-like helix-turn-helix domain

35

85

0.88

PF09339

HTH_IclR

IclR helix-turn-helix domain

37

79

0.87

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

33

77

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f6v-assembly1.cif.gz_A-2 crystal structure of possible transcriptional regulator for arsenical resistance 0.9493 4 81
7p6f-assembly1.cif.gz_BBB 1.93 a resolution x-ray crystal structure of the transcriptional regulator srnr from streptomyces griseus 0.919 2 74
7txo-assembly1.cif.gz_A selenomethionine labeled structure of rext 0.8922 4 72
4ooi-assembly1.cif.gz_B reduced hlyu from vibrio cholerae n16961 0.8838 4 73
3f6o-assembly1.cif.gz_A crystal structure of arsr family transcriptional regulator, rha00566 0.8825 3 87
ID Description Score Start End Superfamily
3f6vA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9493 4 81 1.10.10.10
af_P71941_17_120_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9151 2 78 1.10.10.10
af_Q58651_380_469_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8892 11 71 1.10.10.10
3f6oB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8801 3 87 1.10.10.10
af_I6Y1A7_25_116_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8771 2 76 1.10.10.10
ID Description Score Start End GO Terms
AF-R7CSM9-F1-model_v4 deleted 0.9274 4 82
AF-D7BWN2-F1-model_v4 ArsR family transcriptional regulator 0.9217 6 75 GO:0003700
AF-A0A3E0Q2M5-F1-model_v4 ArsR family transcriptional regulator 0.9202 2 82 GO:0003700
AF-A0A4V2GG76-F1-model_v4 deleted 0.9188 2 78
AF-A0A1E5NE01-F1-model_v4 Transcriptional regulator 0.9183 2 82 GO:0003700

Map