F411365

General Info

Members Datasets Scaffolds Average Seq Length
333 207 292 452

Family's Representative Sequence

Representative Sequence 3300014497|Ga0182008_10060128|Ga0182008_100601281
Length 481
Sequence LINGREKNASAMPASVQKPAGANPFNPMNTKDLRDKYNVAAPRYTSYPTVPYWDAASFSTENWQKAVISSFNASNAADGISLYIHLPFCESLCTYCGCNTRITRNHAVEDPYISAVLKEWQLYTSLLPARPKIKELHLGGGTPTFFSPENLKKLIDGIFKLADRHPQAAFSFEGHPGNTRKEHLETLHDLGFERVSFGIQDFDPRVQLIINRIQTYEEVETVTAQAREAGYSSVNYDLVYGLPLQTLDGLIDTIDSVLTLRPDRIAFYSYAHVPWVKPGQRRYTEKDLPSPALKQQLYETGRAMLKAGGYTEIGMDHFTLTTDGLYAAEENGTLHRNFMGYTDQYSRLMIGLGVSSISDTWTGFAQNVKKVEEYLELVNAGQIPVFKGHILNEEDLLLRQHILNIMCKGSTSWELPAQQGEAFFEGLERMQKLAEDHLVEIGETTLKVTPTGKRFLRNICMTLDARLWENQPATQLFSMAD

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
5 2738541283 Pedobacter sp. OK701 Isolate Unclassified
6 2738541284 Pedobacter sp. YR016 Isolate Unclassified
7 2738541302 Pedobacter sp. CF074 Isolate Unclassified
8 2738543023 Pedobacter sp. OK628 Isolate Unclassified
9 2739367651 Pedobacter sp. OK291 Isolate Unclassified
10 2739367656 Pedobacter sp. CF523 Isolate Unclassified
11 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
12 2818991437 Pedobacter terrae 518 Isolate Unclassified
13 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
14 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
15 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
16 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
17 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
18 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
19 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
20 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
21 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
22 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
23 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
24 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
25 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
26 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
27 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
28 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
29 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
30 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
31 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
32 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
33 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
34 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
35 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
36 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
37 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
38 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
39 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
40 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
41 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
42 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
43 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
44 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
45 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
46 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
47 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
48 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
49 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
50 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
51 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
52 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
53 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
54 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
55 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
56 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
57 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
58 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
59 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
60 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
61 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
62 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
63 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
64 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
65 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
66 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
67 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
68 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
69 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
70 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
71 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
72 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
73 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
74 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
75 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
76 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
77 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
78 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
79 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
80 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
81 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
82 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
83 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
84 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
87 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
88 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
89 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
90 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
91 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
92 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
93 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
94 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
95 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
96 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
97 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
98 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
99 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
100 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
101 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
102 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
103 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
104 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
106 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
107 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
109 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
110 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
112 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
115 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
117 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
138 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
139 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
140 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
141 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
142 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
143 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
144 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
145 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
146 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
147 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
148 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
149 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
150 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
151 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
152 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
153 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
154 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
155 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
156 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
157 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
158 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
159 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
160 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
161 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
162 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
163 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
164 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
165 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
166 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
167 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
168 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
169 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
170 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
171 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
172 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
173 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
174 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
175 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
176 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
177 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
178 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
179 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
180 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
181 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
182 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
183 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
184 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
185 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
186 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
187 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
188 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
189 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
190 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
191 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
192 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
193 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
194 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
195 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
196 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
197 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
198 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
199 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
200 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
201 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
202 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
203 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
204 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
205 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
206 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
207 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.39
Metatranscriptomes 0
Isolates 12.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.01
Nodule 0
Rhizoplane 0.3
Rhizosphere 73.27
Stem 0
Stem Tuber 0
Unclassified 14.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1447768 2162886007 Bacteria 2464
2 SwRhRL2b_contig_1948121 2162886007 Bacteria 77420
3 SwRhRL2b_contig_2405248 2162886007 Bacteria 1520
4 SwRhRL2b_contig_2449184 2162886007 Bacteria 40848
5 JGI24735J21928_10000010 3300002067 Bacteria 237152
6 JGI25162J39368_1000283 3300002737 Bacteria 47953
7 JGI25157J39369_1002924 3300002741 Bacteria 3791
8 JGI25152J39213_1000136 3300002773 Bacteria 50151
9 JGI25150J39212_1000008 3300002774 Bacteria 253098
10 JGI25151J46595_10000014 3300003187 Bacteria 253098
11 JGI25165J46597_1000911 3300003214 Bacteria 20497
12 JGI25153J46596_10000020 3300003215 Bacteria 252978
13 rootH1_10007094 3300003316 Bacteria 23342
14 rootH1_10096772 3300003316 Bacteria 1910
15 rootH2_10007197 3300003320 Bacteria 152995
16 rootH2_10014822 3300003320 Bacteria 16587
17 rootH2_10047547 3300003320 Bacteria 9292
18 rootH2_10098314 3300003320 Bacteria 6783
19 rootH2_10138107 3300003320 Bacteria 4403
20 rootH2_10216873 3300003320 Bacteria 3148
21 rootL2_10019229 3300003322 Bacteria 14688
22 rootH1_10021683 3300003323 Bacteria 35735
23 rootH1_10041027 3300003316 Bacteria 2323
24 rootH1_10041027 3300003323 Bacteria 12517
25 rootH1_10048421 3300003323 Bacteria 3799
26 rootH1_10190529 3300003323 Bacteria 4453
27 rootH1_10228184 3300003323 Bacteria 5519
28 rootH1_10277589 3300003323 Bacteria 4010
29 Ga0055535_1001330 3300003761 Bacteria 13112
30 Ga0055542_1003337 3300003762 Bacteria 4427
31 Ga0055536_1000003 3300003781 Bacteria 447744
32 Ga0055530_10001435 3300003791 Bacteria 17452
33 Ga0065714_10002192 3300005288 Bacteria 92967
34 Ga0065714_10002215 3300005288 Bacteria 50574
35 Ga0065714_10002448 3300005288 Bacteria 31390
36 Ga0065714_10002921 3300005288 Bacteria 21492
37 Ga0065714_10004302 3300005288 Bacteria 6484
38 Ga0065714_10008842 3300005288 Bacteria 4186
39 Ga0065714_10065818 3300005288 Bacteria 8404
40 Ga0065714_10083725 3300005288 Bacteria 2235
41 Ga0065704_10000223 3300005289 Bacteria 110188
42 Ga0065704_10070196 3300005289 Bacteria 94899
43 Ga0065704_10072646 3300005289 Bacteria 8209
44 Ga0065704_10076452 3300005289 Bacteria 5109
45 Ga0065704_10103145 3300005289 Bacteria 2181
46 Ga0065704_10113885 3300005289 Bacteria 1884
47 Ga0070658_10000053 3300005327 Bacteria 116207
48 Ga0070658_10011915 3300005327 Bacteria 6982
49 Ga0070658_10054272 3300005327 Bacteria 3254
50 Ga0070676_10000198 3300005328 Bacteria 25349
51 Ga0070680_100038597 3300005336 Bacteria 3862
52 Ga0068868_100010483 3300005338 Bacteria 6715
53 Ga0070660_100008463 3300005339 Bacteria 7196
54 Ga0070660_100026488 3300005339 Bacteria 4317
55 Ga0070671_100057889 3300005355 Bacteria 3226
56 Ga0070673_100007959 3300005364 Bacteria 7023
57 Ga0070659_100000407 3300005366 Bacteria 32639
58 Ga0070662_100002590 3300005457 Bacteria 11146
59 Ga0068867_100003252 3300005459 Bacteria 11444
60 Ga0070679_100027261 3300005530 Bacteria 5621
61 Ga0068853_100008714 3300005539 Bacteria 8158
62 Ga0068853_100017808 3300005539 Bacteria 5866
63 Ga0070665_100000003 3300005548 Bacteria 811857
64 Ga0068855_100000125 3300005563 Bacteria 96961
65 Ga0068855_100000224 3300005563 Bacteria 72367
66 Ga0068855_100137152 3300005563 Bacteria 2790
67 Ga0068856_100002785 3300005614 Bacteria 17904
68 Ga0068856_100002940 3300005614 Bacteria 17462
69 Ga0068856_100062141 3300005614 Bacteria 3689
70 Ga0068856_100158826 3300005614 Bacteria 2271
71 Ga0097621_100000424 3300006237 Bacteria 29417
72 Ga0068865_100000035 3300006881 Bacteria 83915
73 Ga0105244_10025062 3300009036 Bacteria 3247
74 Ga0105240_10000158 3300009093 Bacteria 139180
75 Ga0105240_10001809 3300009093 Bacteria 36001
76 Ga0105240_10006692 3300009093 Bacteria 16900
77 Ga0105240_10009724 3300009093 Bacteria 13579
78 Ga0105240_10017844 3300009093 Bacteria 9550
79 Ga0105243_10000011 3300009148 Bacteria 312350
80 Ga0105241_10000868 3300009174 Bacteria 22925
81 Ga0105241_10006594 3300009174 Bacteria 8553
82 Ga0105241_10138670 3300009174 Bacteria 1978
83 Ga0105237_10000206 3300009545 Bacteria 84005
84 Ga0105237_10001084 3300009545 Bacteria 36419
85 Ga0105237_10002176 3300009545 Bacteria 24589
86 Ga0105237_10003102 3300009545 Bacteria 20019
87 Ga0105237_10003228 3300009545 Bacteria 19531
88 Ga0105237_10139479 3300009545 Bacteria 2419
89 Ga0105237_10140962 3300009545 Bacteria 2405
90 Ga0105238_10039627 3300009551 Bacteria 4777
91 Ga0105238_10039749 3300009551 Bacteria 4770
92 Ga0105238_10086882 3300009551 Bacteria 3114
93 Ga0105239_10000007 3300010375 Bacteria 385297
94 Ga0105239_10000428 3300010375 Bacteria 61391
95 Ga0105239_10000440 3300010375 Bacteria 60691
96 Ga0105239_10007184 3300010375 Bacteria 12808
97 Ga0105239_10042907 3300010375 Bacteria 4956
98 Ga0157373_10000108 3300013100 Bacteria 64836
99 Ga0157373_10000155 3300013100 Bacteria 55304
100 Ga0157373_10004251 3300013100 Bacteria 10805
101 Ga0157373_10008550 3300013100 Bacteria 7604
102 Ga0157373_10081942 3300013100 Bacteria 2274
103 Ga0157371_10000034 3300013102 Bacteria 223947
104 Ga0157371_10001105 3300013102 Bacteria 29209
105 Ga0157371_10006272 3300013102 Bacteria 9847
106 Ga0157371_10020507 3300013102 Bacteria 4864
107 Ga0157370_10001665 3300013104 Bacteria 27358
108 Ga0157370_10002745 3300013104 Bacteria 21039
109 Ga0157370_10005257 3300013104 Bacteria 14560
110 Ga0157370_10012914 3300013104 Bacteria 8633
111 Ga0157370_10073199 3300013104 Bacteria 3232
112 Ga0157369_10000117 3300013105 Bacteria 111900
113 Ga0157374_10000130 3300013296 Bacteria 68718
114 Ga0157374_10000364 3300013296 Bacteria 41839
115 Ga0157378_10035582 3300013297 Bacteria 4405
116 Ga0163162_10000159 3300013306 Bacteria 62464
117 Ga0163162_10027289 3300013306 Bacteria 5645
118 Ga0157372_10011842 3300013307 Bacteria 9290
119 Ga0157372_10048859 3300013307 Bacteria 4702
120 Ga0157372_10053232 3300013307 Bacteria 4510
121 Ga0157372_10351885 3300013307 Unclassified 1716
122 Ga0182008_10000001 3300014497 Bacteria 540790
123 Ga0182008_10000559 3300014497 Bacteria 27618
124 Ga0182008_10004868 3300014497 Bacteria 7756
125 Ga0182008_10060128 3300014497 Bacteria 1873
126 Ga0182008_10062398 3300014497 Bacteria 1837
127 Ga0157377_10006757 3300014745 Bacteria 5495
128 Ga0157376_10066584 3300014969 Bacteria 3045
129 Ga0182006_1000232 3300015261 Bacteria 52928
130 Ga0182006_1000365 3300015261 Bacteria 37791
131 Ga0182006_1014486 3300015261 Bacteria 3398
132 Ga0182007_10000007 3300015262 Bacteria 376596
133 Ga0183373_1003 3300015682 Bacteria 558813
134 Ga0163161_10000237 3300017792 Bacteria 50205
135 Ga0163161_10000527 3300017792 Bacteria 31224
136 Ga0163161_10000671 3300017792 Bacteria 27332
137 Ga0163161_10000731 3300017792 Bacteria 25846
138 Ga0213872_10004361 3300021361 Bacteria 7532
139 Ga0207427_100071 3300025231 Bacteria 159974
140 Ga0209437_100021 3300025233 Bacteria 646400
141 Ga0209437_100024 3300025233 Bacteria 592878
142 Ga0209258_100116 3300025242 Bacteria 190317
143 Ga0207425_1000007 3300025245 Bacteria 777411
144 Ga0209026_1000199 3300025250 Bacteria 83231
145 Ga0209026_1000798 3300025250 Bacteria 17192
146 Ga0209148_1000175 3300025254 Bacteria 129536
147 Ga0209129_1000006 3300025258 Bacteria 777761
148 Ga0209233_1000035 3300025261 Bacteria 568478
149 Ga0209455_1001599 3300025272 Bacteria 9950
150 Ga0209130_1002164 3300025284 Bacteria 10356
151 Ga0209676_1000001 3300025292 Bacteria 1852142
152 Ga0209025_1000089 3300025294 Bacteria 254130
153 Ga0209758_1000016 3300025297 Bacteria 778557
154 Ga0209050_1000016 3300025298 Bacteria 729149
155 Ga0207426_1000024 3300025302 Bacteria 534075
156 Ga0207647_10004296 3300025904 Bacteria 10570
157 Ga0207645_10000480 3300025907 Bacteria 33019
158 Ga0207705_10000028 3300025909 Bacteria 240636
159 Ga0207705_10073835 3300025909 Bacteria 2475
160 Ga0207654_10004939 3300025911 Bacteria 6749
161 Ga0207654_10097898 3300025911 Bacteria 1802
162 Ga0207695_10000235 3300025913 Bacteria 146984
163 Ga0207695_10001804 3300025913 Bacteria 33797
164 Ga0207695_10042882 3300025913 Bacteria 4826
165 Ga0207695_10126086 3300025913 Unclassified 2522
166 Ga0207671_10000316 3300025914 Bacteria 71241
167 Ga0207671_10000698 3300025914 Bacteria 43341
168 Ga0207671_10001664 3300025914 Bacteria 25224
169 Ga0207671_10008370 3300025914 Bacteria 8779
170 Ga0207671_10020851 3300025914 Bacteria 4983
171 Ga0207652_10206554 3300025921 Bacteria 1768
172 Ga0207694_10039696 3300025924 Bacteria 3623
173 Ga0207694_10066903 3300025924 Bacteria 2804
174 Ga0207694_10068217 3300025924 Bacteria 2777
175 Ga0207644_10041332 3300025931 Bacteria 3261
176 Ga0207690_10001496 3300025932 Bacteria 14603
177 Ga0207706_10000725 3300025933 Bacteria 34447
178 Ga0207709_10000034 3300025935 Bacteria 313184
179 Ga0207704_10000126 3300025938 Bacteria 41583
180 Ga0207667_10000266 3300025949 Bacteria 72382
181 Ga0207667_10001208 3300025949 Bacteria 32296
182 Ga0207667_10068310 3300025949 Bacteria 3701
183 Ga0207667_10221088 3300025949 Bacteria 1940
184 Ga0207677_10003874 3300026023 Bacteria 7968
185 Ga0207639_10001742 3300026041 Bacteria 14659
186 Ga0207639_10068961 3300026041 Bacteria 2757
187 Ga0207702_10002387 3300026078 Bacteria 17897
188 Ga0207702_10005514 3300026078 Bacteria 11069
189 Ga0207702_10047330 3300026078 Bacteria 3624
190 Ga0207702_10102001 3300026078 Bacteria 2535
191 Ga0207648_10006479 3300026089 Bacteria 11630
192 Ga0207683_10033476 3300026121 Bacteria 4463
193 Ga0268266_10000078 3300028379 Bacteria 213632
194 Ga0265319_1003117 3300028563 Bacteria 8760
195 Ga0265334_10000943 3300028573 Bacteria 14499
196 Ga0265318_10000779 3300028577 Bacteria 21156
197 Ga0307517_10001460 3300028786 Bacteria 39582
198 Ga0307515_10000848 3300028794 Bacteria 70311
199 Ga0307515_10071733 3300028794 Bacteria 4688
200 Ga0265338_10007108 3300028800 Bacteria 14021
201 Ga0316177_1136523 3300030731 Bacteria 9367
202 Ga0316176_1021216 3300030732 Bacteria 45470
203 Ga0316183_1214309 3300030742 Bacteria 11613
204 Ga0316181_1109246 3300030744 Bacteria 74541
205 Ga0265330_10007724 3300031235 Bacteria 5223
206 Ga0265332_10001829 3300031238 Bacteria 11370
207 Ga0265328_10003593 3300031239 Bacteria 6839
208 Ga0265320_10015175 3300031240 Bacteria 4360
209 Ga0265325_10004293 3300031241 Bacteria 9034
210 Ga0265339_10011932 3300031249 Bacteria 5325
211 Ga0265331_10018388 3300031250 Bacteria 3625
212 Ga0265327_10000093 3300031251 Bacteria 195220
213 Ga0265316_10017043 3300031344 Bacteria 6288
214 Ga0307509_10040025 3300031507 Bacteria 5100
215 Ga0307408_100004362 3300031548 Bacteria 9613
216 Ga0307408_100004544 3300031548 Bacteria 9399
217 Ga0307408_100006905 3300031548 Bacteria 7516
218 Ga0265313_10004958 3300031595 Bacteria 9959
219 Ga0265314_10017278 3300031711 Bacteria 5666
220 Ga0265342_10004872 3300031712 Bacteria 10392
221 Ga0307405_10000220 3300031731 Bacteria 20568
222 Ga0307407_10000007 3300031903 Bacteria 210716
223 Ga0307412_10000017 3300031911 Bacteria 294698
224 Ga0307412_10015394 3300031911 Bacteria 4535
225 Ga0307412_10030239 3300031911 Bacteria 3407
226 Ga0307416_100000015 3300032002 Bacteria 210716
227 Ga0307414_10000855 3300032004 Bacteria 15518
228 Ga0307414_10005107 3300032004 Bacteria 7199
229 Ga0307414_10013001 3300032004 Bacteria 4943
230 Ga0307414_10019697 3300032004 Bacteria 4188
231 Ga0307411_10030341 3300032005 Bacteria 3313
232 Ga0307507_10000052 3300033179 Bacteria 168303
233 Ga0307510_10000107 3300033180 Bacteria 65945
234 Ga0373941_0026784 3300035115 Bacteria 1677
235 Ga0395899_0000001 3300037312 Bacteria 1750322
236 Ga0395899_0000185 3300037312 Bacteria 91682
237 Ga0395899_0035457 3300037312 Bacteria 3745
238 Ga0395900_0000410 3300037418 Bacteria 62004
239 Ga0395900_0025330 3300037418 Bacteria 6073
240 Ga0395898_0034598 3300037466 Bacteria 5033
241 Ga0395905_0000203 3300037471 Bacteria 92320
242 Ga0395905_0000819 3300037471 Bacteria 40842
243 Ga0395905_0263959 3300037471 Bacteria 1607
244 Ga0395901_0001366 3300038443 Bacteria 25531
245 Ga0436361_0255105 3300039447 Bacteria 22008
246 Ga0495650_0000110 3300046471 Bacteria 198355
247 Ga0495585_0000723 3300046492 Bacteria 29538
248 Ga0495606_0000003 3300046507 Bacteria 449402
249 Ga0495606_0009862 3300046507 Bacteria 8010
250 Ga0495606_0013231 3300046507 Bacteria 6544
251 Ga0495610_0000025 3300046512 Bacteria 301208
252 Ga0495610_0000222 3300046512 Bacteria 61039
253 Ga0495610_0001642 3300046512 Bacteria 19658
254 Ga0495616_0006203 3300046513 Bacteria 7271
255 Ga0495616_0013446 3300046513 Bacteria 4616
256 Ga0495637_0022177 3300046520 Bacteria 2900
257 Ga0495648_0003421 3300046524 Bacteria 13942
258 Ga0495648_0010863 3300046524 Bacteria 6909
259 Ga0495609_0015333 3300046538 Bacteria 3588
260 Ga0495633_0000023 3300046558 Bacteria 226510
261 Ga0495633_0011708 3300046558 Bacteria 4711
262 Ga0495625_0000013 3300046660 Bacteria 345151
263 Ga0495625_0000741 3300046660 Bacteria 45531
264 Ga0495625_0024635 3300046660 Bacteria 4577
265 Ga0495661_0017980 3300046665 Bacteria 4657
266 Ga0495649_0000010 3300046694 Bacteria 430552
267 Ga0495660_0004170 3300046810 Bacteria 8789
268 Ga0495683_0013619 3300047323 Bacteria 4250
269 Ga0495686_0012337 3300047472 Bacteria 5982
270 Ga0495686_0017664 3300047472 Bacteria 4801
271 Ga0496116_0002724 3300048919 Bacteria 18172
272 Ga0496122_0000390 3300048925 Bacteria 93522
273 Ga0496122_0010272 3300048925 Bacteria 9687
274 Ga0496123_0004064 3300048926 Bacteria 15755
275 Ga0496123_0025396 3300048926 Bacteria 4468
276 Ga0501223_004486 3300049663 Bacteria 2984
277 Ga0501241_001871 3300049758 Bacteria 4142
278 nmdc:mga0k408_1104_c1 3300050493 Bacteria 14776
279 nmdc:mga0k408_524_c1 3300050493 Bacteria 21105
280 Ga0500635_0002891 3300053080 Bacteria 4272
281 Ga0500635_0003081 3300053080 Bacteria 4168
282 Ga0500646_0011326 3300053090 Bacteria 2294
283 Ga0500583_0002373 3300053092 Bacteria 5644
284 Ga0500569_000188 3300053109 Bacteria 9858
285 Ga0500608_007794 3300053122 Bacteria 4453
286 Ga0500608_039992 3300053122 Bacteria 2247
287 Ga0500618_000004 3300053125 Bacteria 293180
288 Ga0500658_0000612 3300053134 Bacteria 14816
289 Ga0500559_0021437 3300053136 Bacteria 2738
290 Ga0500622_0000417 3300053156 Bacteria 40427
291 Ga0500636_0014549 3300053177 Bacteria 4627
292 Ga0500661_002827 3300055283 Bacteria 3269

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031251 Ga0265327_10000093 Ga0265327_10000093123 359
2 3300053090 Ga0500646_0011326 Ga0500646_0011326_80_1207 371
3 3300053136 Ga0500559_0021437 Ga0500559_0021437_1531_2670 375
4 iso_pu_bacteria 2919186247 2919186560 405
5 iso_pu_bacteria 2939664404 2939666170 405
6 3300030731 Ga0316177_1136523 Ga0316177_11365237 428
7 3300030732 Ga0316176_1021216 Ga0316176_10212166 428
8 iso_pu_bacteria 2840677318 2840677724 428
9 iso_pu_bacteria 2896085136 2896085542 428
10 2162886007 SwRhRL2b_contig_2405248 SwRhRL2b_0622.00005770 435
11 3300005289 Ga0065704_10103145 Ga0065704_101031452 435
12 3300015682 Ga0183373_1003 Ga0183373_1003123 435
13 3300013307 Ga0157372_10048859 Ga0157372_100488593 436
14 iso_pu_bacteria 2585427687 2586210257 436
15 iso_pu_bacteria 2738541302 2738853598 436
16 iso_pu_bacteria 2739367651 2739589066 436
17 iso_pu_bacteria 2739367656 2739615695 436
18 iso_pu_bacteria 2818991437 2819548803 436
19 iso_pu_bacteria 2842722452 2842725896 436
20 iso_pu_bacteria 2842909656 2842912925 436
21 iso_pu_bacteria 2857627736 2857632241 436
22 iso_pu_bacteria 2904445276 2904445552 436
23 iso_pu_bacteria 2945997725 2946002421 436
24 iso_pu_bacteria 2954016120 2954019484 436
25 3300002773 JGI25152J39213_1000136 JGI25152J39213_100013628 437
26 3300002774 JGI25150J39212_1000008 JGI25150J39212_1000008129 437
27 3300003187 JGI25151J46595_10000014 JGI25151J46595_10000014129 437
28 3300003215 JGI25153J46596_10000020 JGI25153J46596_10000020129 437
29 3300003781 Ga0055536_1000003 Ga0055536_1000003129 437
30 3300003791 Ga0055530_10001435 Ga0055530_1000143512 437
31 3300005288 Ga0065714_10002192 Ga0065714_1000219274 437
32 3300005288 Ga0065714_10004302 Ga0065714_100043022 437
33 3300009036 Ga0105244_10025062 Ga0105244_100250624 437
34 3300013102 Ga0157371_10000034 Ga0157371_1000003460 437
35 3300013104 Ga0157370_10073199 Ga0157370_100731992 437
36 3300013105 Ga0157369_10000117 Ga0157369_1000011719 437
37 3300013306 Ga0163162_10000159 Ga0163162_1000015925 437
38 3300014497 Ga0182008_10004868 Ga0182008_100048684 437
39 3300015261 Ga0182006_1000232 Ga0182006_100023219 437
40 3300015261 Ga0182006_1000365 Ga0182006_100036515 437
41 3300015262 Ga0182007_10000007 Ga0182007_10000007218 437
42 3300017792 Ga0163161_10000237 Ga0163161_1000023712 437
43 3300017792 Ga0163161_10000671 Ga0163161_1000067117 437
44 3300025245 Ga0207425_1000007 Ga0207425_100000747 437
45 3300025258 Ga0209129_1000006 Ga0209129_100000647 437
46 3300025292 Ga0209676_1000001 Ga0209676_1000001465 437
47 3300025294 Ga0209025_1000089 Ga0209025_1000089125 437
48 3300025297 Ga0209758_1000016 Ga0209758_100001647 437
49 3300025298 Ga0209050_1000016 Ga0209050_1000016130 437
50 3300025949 Ga0207667_10068310 Ga0207667_100683102 437
51 3300031731 Ga0307405_10000220 Ga0307405_1000022014 437
52 3300031903 Ga0307407_10000007 Ga0307407_10000007111 437
53 3300032002 Ga0307416_100000015 Ga0307416_10000001575 437
54 3300032004 Ga0307414_10019697 Ga0307414_100196972 437
55 3300046512 Ga0495610_0000025 Ga0495610_0000025_39675_41021 437
56 3300046512 Ga0495610_0001642 Ga0495610_0001642_796_2142 437
57 3300046520 Ga0495637_0022177 Ga0495637_0022177_41_1387 437
58 iso_pu_bacteria 2842903701 2842903767 439
59 3300030742 Ga0316183_1214309 Ga0316183_12143094 440
60 3300030744 Ga0316181_1109246 Ga0316181_110924629 440
61 3300031911 Ga0307412_10030239 Ga0307412_100302392 440
62 3300049663 Ga0501223_004486 Ga0501223_004486_164_1504 440
63 iso_pu_bacteria 2902048731 2902048757 441
64 iso_pu_bacteria 2910245624 2910245660 442
65 iso_pu_bacteria 2818991460 2819676966 443
66 iso_pu_bacteria 2929239360 2929240044 443
67 2162886007 SwRhRL2b_contig_1948121 SwRhRL2b_0659.00008930 444
68 3300005289 Ga0065704_10070196 Ga0065704_1007019648 444
69 3300013100 Ga0157373_10081942 Ga0157373_100819421 444
70 iso_pu_bacteria 2883068021 2883071107 444
71 3300003320 rootH2_10014822 rootH2_100148228 445
72 3300003320 rootH2_10216873 rootH2_102168732 445
73 3300031548 Ga0307408_100004362 Ga0307408_1000043622 445
74 3300031548 Ga0307408_100004544 Ga0307408_1000045442 445
75 3300031548 Ga0307408_100006905 Ga0307408_1000069055 445
76 3300031911 Ga0307412_10015394 Ga0307412_100153943 445
77 3300032005 Ga0307411_10030341 Ga0307411_100303414 445
78 3300047472 Ga0495686_0012337 Ga0495686_0012337_1726_3084 445
79 iso_pu_bacteria 2738541283 2738754386 445
80 3300003316 rootH1_10007094 rootH1_1000709413 446
81 3300003320 rootH2_10047547 rootH2_100475478 446
82 3300003320 rootH2_10138107 rootH2_101381073 446
83 3300003323 rootH1_10190529 rootH1_101905293 446
84 3300003323 rootH1_10228184 rootH1_102281841 446
85 3300003323 rootH1_10277589 rootH1_102775893 446
86 3300005288 Ga0065714_10083725 Ga0065714_100837252 446
87 3300005563 Ga0068855_100000125 Ga0068855_10000012536 446
88 3300005563 Ga0068855_100000224 Ga0068855_10000022450 446
89 3300005614 Ga0068856_100002785 Ga0068856_10000278517 446
90 3300009093 Ga0105240_10000158 Ga0105240_1000015845 446
91 3300009174 Ga0105241_10000868 Ga0105241_1000086810 446
92 3300009545 Ga0105237_10003228 Ga0105237_1000322811 446
93 3300010375 Ga0105239_10000428 Ga0105239_1000042845 446
94 3300013104 Ga0157370_10002745 Ga0157370_1000274514 446
95 3300013297 Ga0157378_10035582 Ga0157378_100355822 446
96 3300013306 Ga0163162_10027289 Ga0163162_100272894 446
97 3300014497 Ga0182008_10000559 Ga0182008_1000055913 446
98 3300015261 Ga0182006_1014486 Ga0182006_10144863 446
99 3300017792 Ga0163161_10000527 Ga0163161_1000052717 446
100 3300025911 Ga0207654_10004939 Ga0207654_100049394 446
101 3300025911 Ga0207654_10097898 Ga0207654_100978982 446
102 3300025913 Ga0207695_10000235 Ga0207695_1000023545 446
103 3300025914 Ga0207671_10000316 Ga0207671_1000031640 446
104 3300025914 Ga0207671_10001664 Ga0207671_1000166417 446
105 3300025914 Ga0207671_10008370 Ga0207671_100083703 446
106 3300025924 Ga0207694_10068217 Ga0207694_100682172 446
107 3300025949 Ga0207667_10000266 Ga0207667_1000026630 446
108 3300025949 Ga0207667_10001208 Ga0207667_1000120810 446
109 3300026078 Ga0207702_10002387 Ga0207702_100023872 446
110 3300031911 Ga0307412_10000017 Ga0307412_1000001738 446
111 3300032004 Ga0307414_10000855 Ga0307414_1000085510 446
112 3300032004 Ga0307414_10005107 Ga0307414_100051075 446
113 3300037312 Ga0395899_0000001 Ga0395899_0000001_829441_830802 446
114 3300046471 Ga0495650_0000110 Ga0495650_0000110_25433_26794 446
115 3300046492 Ga0495585_0000723 Ga0495585_0000723_27848_29209 446
116 3300046507 Ga0495606_0000003 Ga0495606_0000003_268888_270249 446
117 3300046507 Ga0495606_0009862 Ga0495606_0009862_6208_7569 446
118 3300046512 Ga0495610_0000222 Ga0495610_0000222_45636_46997 446
119 3300046513 Ga0495616_0006203 Ga0495616_0006203_1006_2367 446
120 3300046538 Ga0495609_0015333 Ga0495609_0015333_205_1566 446
121 3300046558 Ga0495633_0011708 Ga0495633_0011708_151_1512 446
122 3300046660 Ga0495625_0000013 Ga0495625_0000013_168412_169773 446
123 3300046665 Ga0495661_0017980 Ga0495661_0017980_3230_4591 446
124 3300046694 Ga0495649_0000010 Ga0495649_0000010_175293_176654 446
125 3300046810 Ga0495660_0004170 Ga0495660_0004170_1008_2369 446
126 3300049758 Ga0501241_001871 Ga0501241_001871_526_1884 446
127 3300053080 Ga0500635_0002891 Ga0500635_0002891_2541_3917 446
128 iso_pu_bacteria 2738541284 2738763856 446
129 iso_pu_bacteria 2738543023 2739303361 446
130 iso_pu_bacteria 2775506987 2776613666 446
131 iso_pu_bacteria 2852623160 2852626116 446
132 iso_pu_bacteria 2852627209 2852628338 446
133 iso_pu_bacteria 2884933994 2884935413 446
134 iso_pu_bacteria 2887375801 2887378998 446
135 iso_pu_bacteria 2890737413 2890738122 446
136 iso_pu_bacteria 2896344016 2896346036 446
137 iso_pu_bacteria 2898713307 2898714116 446
138 iso_pu_bacteria 2928078545 2928083050 446
139 iso_pu_bacteria 2932082852 2932086876 446
140 2162886007 SwRhRL2b_contig_2449184 SwRhRL2b_0654.00002490 447
141 3300002067 JGI24735J21928_10000010 JGI24735J21928_10000010181 447
142 3300003320 rootH2_10007197 rootH2_1000719797 447
143 3300003322 rootL2_10019229 rootL2_100192294 447
144 3300003761 Ga0055535_1001330 Ga0055535_100133011 447
145 3300003762 Ga0055542_1003337 Ga0055542_10033372 447
146 3300005288 Ga0065714_10002215 Ga0065714_1000221515 447
147 3300005288 Ga0065714_10002448 Ga0065714_1000244810 447
148 3300005288 Ga0065714_10002921 Ga0065714_100029219 447
149 3300005288 Ga0065714_10008842 Ga0065714_100088422 447
150 3300005289 Ga0065704_10000223 Ga0065704_1000022342 447
151 3300005289 Ga0065704_10072646 Ga0065704_100726464 447
152 3300005327 Ga0070658_10011915 Ga0070658_100119152 447
153 3300005328 Ga0070676_10000198 Ga0070676_1000019819 447
154 3300005338 Ga0068868_100010483 Ga0068868_1000104832 447
155 3300005355 Ga0070671_100057889 Ga0070671_1000578893 447
156 3300005364 Ga0070673_100007959 Ga0070673_1000079595 447
157 3300005457 Ga0070662_100002590 Ga0070662_1000025902 447
158 3300005459 Ga0068867_100003252 Ga0068867_10000325210 447
159 3300005539 Ga0068853_100008714 Ga0068853_1000087144 447
160 3300005548 Ga0070665_100000003 Ga0070665_100000003229 447
161 3300005563 Ga0068855_100137152 Ga0068855_1001371522 447
162 3300005614 Ga0068856_100158826 Ga0068856_1001588263 447
163 3300006237 Ga0097621_100000424 Ga0097621_1000004245 447
164 3300006881 Ga0068865_100000035 Ga0068865_10000003560 447
165 3300009093 Ga0105240_10001809 Ga0105240_100018098 447
166 3300009093 Ga0105240_10006692 Ga0105240_100066926 447
167 3300009093 Ga0105240_10017844 Ga0105240_100178447 447
168 3300009174 Ga0105241_10006594 Ga0105241_100065941 447
169 3300009174 Ga0105241_10138670 Ga0105241_101386701 447
170 3300009545 Ga0105237_10002176 Ga0105237_1000217612 447
171 3300009545 Ga0105237_10140962 Ga0105237_101409623 447
172 3300009551 Ga0105238_10039627 Ga0105238_100396273 447
173 3300010375 Ga0105239_10007184 Ga0105239_100071847 447
174 3300010375 Ga0105239_10042907 Ga0105239_100429074 447
175 3300013100 Ga0157373_10000108 Ga0157373_1000010824 447
176 3300013100 Ga0157373_10004251 Ga0157373_1000425110 447
177 3300013102 Ga0157371_10001105 Ga0157371_100011057 447
178 3300013102 Ga0157371_10006272 Ga0157371_100062727 447
179 3300013102 Ga0157371_10020507 Ga0157371_100205074 447
180 3300013104 Ga0157370_10001665 Ga0157370_1000166521 447
181 3300013104 Ga0157370_10005257 Ga0157370_100052577 447
182 3300013104 Ga0157370_10012914 Ga0157370_100129144 447
183 3300013296 Ga0157374_10000130 Ga0157374_1000013054 447
184 3300013296 Ga0157374_10000364 Ga0157374_1000036414 447
185 3300013307 Ga0157372_10011842 Ga0157372_100118428 447
186 3300013307 Ga0157372_10053232 Ga0157372_100532323 447
187 3300014497 Ga0182008_10000001 Ga0182008_10000001166 447
188 3300014497 Ga0182008_10062398 Ga0182008_100623982 447
189 3300014745 Ga0157377_10006757 Ga0157377_100067573 447
190 3300014969 Ga0157376_10066584 Ga0157376_100665842 447
191 3300017792 Ga0163161_10000731 Ga0163161_1000073114 447
192 3300021361 Ga0213872_10004361 Ga0213872_100043614 447
193 3300025242 Ga0209258_100116 Ga0209258_10011677 447
194 3300025250 Ga0209026_1000798 Ga0209026_10007989 447
195 3300025254 Ga0209148_1000175 Ga0209148_10001758 447
196 3300025272 Ga0209455_1001599 Ga0209455_10015995 447
197 3300025284 Ga0209130_1002164 Ga0209130_10021649 447
198 3300025302 Ga0207426_1000024 Ga0207426_100002497 447
199 3300025904 Ga0207647_10004296 Ga0207647_100042969 447
200 3300025907 Ga0207645_10000480 Ga0207645_1000048010 447
201 3300025913 Ga0207695_10001804 Ga0207695_1000180413 447
202 3300025913 Ga0207695_10042882 Ga0207695_100428824 447
203 3300025914 Ga0207671_10020851 Ga0207671_100208513 447
204 3300025924 Ga0207694_10039696 Ga0207694_100396963 447
205 3300025931 Ga0207644_10041332 Ga0207644_100413323 447
206 3300025933 Ga0207706_10000725 Ga0207706_1000072521 447
207 3300025938 Ga0207704_10000126 Ga0207704_1000012614 447
208 3300025949 Ga0207667_10221088 Ga0207667_102210882 447
209 3300026023 Ga0207677_10003874 Ga0207677_100038744 447
210 3300026041 Ga0207639_10001742 Ga0207639_100017429 447
211 3300026078 Ga0207702_10102001 Ga0207702_101020013 447
212 3300026089 Ga0207648_10006479 Ga0207648_100064794 447
213 3300026121 Ga0207683_10033476 Ga0207683_100334762 447
214 3300028379 Ga0268266_10000078 Ga0268266_1000007824 447
215 3300028563 Ga0265319_1003117 Ga0265319_10031174 447
216 3300028573 Ga0265334_10000943 Ga0265334_1000094312 447
217 3300028577 Ga0265318_10000779 Ga0265318_1000077918 447
218 3300028800 Ga0265338_10007108 Ga0265338_100071089 447
219 3300031235 Ga0265330_10007724 Ga0265330_100077244 447
220 3300031238 Ga0265332_10001829 Ga0265332_100018297 447
221 3300031239 Ga0265328_10003593 Ga0265328_100035935 447
222 3300031240 Ga0265320_10015175 Ga0265320_100151755 447
223 3300031241 Ga0265325_10004293 Ga0265325_100042934 447
224 3300031249 Ga0265339_10011932 Ga0265339_100119324 447
225 3300031250 Ga0265331_10018388 Ga0265331_100183884 447
226 3300031344 Ga0265316_10017043 Ga0265316_100170434 447
227 3300031507 Ga0307509_10040025 Ga0307509_100400253 447
228 3300031595 Ga0265313_10004958 Ga0265313_100049589 447
229 3300031711 Ga0265314_10017278 Ga0265314_100172785 447
230 3300031712 Ga0265342_10004872 Ga0265342_1000487210 447
231 3300032004 Ga0307414_10013001 Ga0307414_100130012 447
232 3300037312 Ga0395899_0000185 Ga0395899_0000185_18213_19577 447
233 3300037418 Ga0395900_0000410 Ga0395900_0000410_17565_18929 447
234 3300037466 Ga0395898_0034598 Ga0395898_0034598_1502_2866 447
235 3300037471 Ga0395905_0000203 Ga0395905_0000203_72423_73787 447
236 3300038443 Ga0395901_0001366 Ga0395901_0001366_6540_7904 447
237 3300039447 Ga0436361_0255105 Ga0436361_0255105_3844_5208 447
238 3300050493 nmdc:mga0k408_524_c1 nmdc:mga0k408_524_c1_8976_10340 447
239 3300053092 Ga0500583_0002373 Ga0500583_0002373_1002_2360 447
240 3300053109 Ga0500569_000188 Ga0500569_000188_6248_7606 447
241 3300053122 Ga0500608_007794 Ga0500608_007794_2767_4131 447
242 3300053134 Ga0500658_0000612 Ga0500658_0000612_12151_13509 447
243 3300053177 Ga0500636_0014549 Ga0500636_0014549_3037_4395 447
244 3300055283 Ga0500661_002827 Ga0500661_002827_386_1744 447
245 iso_pu_bacteria 2599185184 2599481077 447
246 iso_pu_bacteria 2896317667 2896319053 447
247 iso_pu_bacteria 2919437846 2919440464 447
248 iso_pu_bacteria 2928147474 2928150071 447
249 iso_pu_bacteria 2977232053 2977232600 447
250 3300002737 JGI25162J39368_1000283 JGI25162J39368_100028326 448
251 3300002741 JGI25157J39369_1002924 JGI25157J39369_10029242 448
252 3300003316 rootH1_10096772 rootH1_100967721 448
253 3300003320 rootH2_10098314 rootH2_100983147 448
254 3300003323 rootH1_10021683 rootH1_100216833 448
255 3300003323 rootH1_10041027 rootH1_100410275 448
256 3300003323 rootH1_10048421 rootH1_100484212 448
257 3300005288 Ga0065714_10065818 Ga0065714_100658181 448
258 3300005327 Ga0070658_10000053 Ga0070658_1000005360 448
259 3300005327 Ga0070658_10054272 Ga0070658_100542722 448
260 3300005336 Ga0070680_100038597 Ga0070680_1000385974 448
261 3300005339 Ga0070660_100008463 Ga0070660_1000084633 448
262 3300005339 Ga0070660_100026488 Ga0070660_1000264884 448
263 3300005366 Ga0070659_100000407 Ga0070659_10000040726 448
264 3300005530 Ga0070679_100027261 Ga0070679_1000272612 448
265 3300005539 Ga0068853_100017808 Ga0068853_1000178082 448
266 3300005614 Ga0068856_100002940 Ga0068856_10000294010 448
267 3300005614 Ga0068856_100062141 Ga0068856_1000621412 448
268 3300009093 Ga0105240_10009724 Ga0105240_100097243 448
269 3300009545 Ga0105237_10003102 Ga0105237_100031022 448
270 3300009545 Ga0105237_10139479 Ga0105237_101394792 448
271 3300009551 Ga0105238_10039749 Ga0105238_100397492 448
272 3300010375 Ga0105239_10000007 Ga0105239_1000000768 448
273 3300010375 Ga0105239_10000440 Ga0105239_1000044033 448
274 3300013100 Ga0157373_10000155 Ga0157373_1000015546 448
275 3300013307 Ga0157372_10351885 Ga0157372_103518851 448
276 3300025233 Ga0209437_100024 Ga0209437_100024551 448
277 3300025250 Ga0209026_1000199 Ga0209026_100019960 448
278 3300025909 Ga0207705_10000028 Ga0207705_10000028189 448
279 3300025909 Ga0207705_10073835 Ga0207705_100738352 448
280 3300025913 Ga0207695_10126086 Ga0207695_101260862 448
281 3300025914 Ga0207671_10000698 Ga0207671_1000069814 448
282 3300025921 Ga0207652_10206554 Ga0207652_102065542 448
283 3300025924 Ga0207694_10066903 Ga0207694_100669033 448
284 3300025932 Ga0207690_10001496 Ga0207690_100014966 448
285 3300026041 Ga0207639_10068961 Ga0207639_100689612 448
286 3300026078 Ga0207702_10005514 Ga0207702_100055148 448
287 3300026078 Ga0207702_10047330 Ga0207702_100473302 448
288 3300028786 Ga0307517_10001460 Ga0307517_1000146010 448
289 3300028794 Ga0307515_10000848 Ga0307515_1000084846 448
290 3300033179 Ga0307507_10000052 Ga0307507_10000052146 448
291 3300033180 Ga0307510_10000107 Ga0307510_100001072 448
292 3300035115 Ga0373941_0026784 Ga0373941_0026784_247_1617 448
293 3300037312 Ga0395899_0035457 Ga0395899_0035457_1383_2750 448
294 3300037418 Ga0395900_0025330 Ga0395900_0025330_4122_5489 448
295 3300037471 Ga0395905_0000819 Ga0395905_0000819_5478_6845 448
296 3300037471 Ga0395905_0263959 Ga0395905_0263959_83_1465 448
297 3300046507 Ga0495606_0013231 Ga0495606_0013231_5014_6387 448
298 3300046513 Ga0495616_0013446 Ga0495616_0013446_2443_3816 448
299 3300046524 Ga0495648_0003421 Ga0495648_0003421_12340_13710 448
300 3300046524 Ga0495648_0010863 Ga0495648_0010863_2622_3992 448
301 3300046558 Ga0495633_0000023 Ga0495633_0000023_201966_203336 448
302 3300046660 Ga0495625_0000741 Ga0495625_0000741_25329_26699 448
303 3300046660 Ga0495625_0024635 Ga0495625_0024635_1150_2523 448
304 3300047323 Ga0495683_0013619 Ga0495683_0013619_2339_3706 448
305 3300047472 Ga0495686_0017664 Ga0495686_0017664_2927_4297 448
306 3300053080 Ga0500635_0003081 Ga0500635_0003081_1494_2855 448
307 3300053122 Ga0500608_039992 Ga0500608_039992_627_2000 448
308 3300053125 Ga0500618_000004 Ga0500618_000004_103147_104520 448
309 3300053156 Ga0500622_0000417 Ga0500622_0000417_33718_35079 448
310 3300048919 Ga0496116_0002724 Ga0496116_0002724_6587_7936 449
311 3300048925 Ga0496122_0010272 Ga0496122_0010272_1596_2945 449
312 3300048926 Ga0496123_0025396 Ga0496123_0025396_2175_3524 449
313 3300048925 Ga0496122_0000390 Ga0496122_0000390_88434_89807 450
314 3300048926 Ga0496123_0004064 Ga0496123_0004064_5662_7035 450
315 iso_pu_bacteria 2721755487 2722727320 451
316 iso_pu_bacteria 2904780799 2904784234 451
317 iso_pu_bacteria 2919177583 2919180202 451
318 3300009545 Ga0105237_10000206 Ga0105237_1000020620 452
319 3300009551 Ga0105238_10086882 Ga0105238_100868822 452
320 3300028794 Ga0307515_10071733 Ga0307515_100717332 452
321 3300003214 JGI25165J46597_1000911 JGI25165J46597_100091112 453
322 3300009545 Ga0105237_10001084 Ga0105237_1000108432 453
323 3300013100 Ga0157373_10008550 Ga0157373_100085504 453
324 3300014497 Ga0182008_10060128 Ga0182008_100601281 453
325 3300025231 Ga0207427_100071 Ga0207427_10007141 453
326 3300025233 Ga0209437_100021 Ga0209437_100021219 453
327 3300025261 Ga0209233_1000035 Ga0209233_1000035419 453
328 3300050493 nmdc:mga0k408_1104_c1 nmdc:mga0k408_1104_c1_3139_4554 455
329 2162886007 SwRhRL2b_contig_1447768 SwRhRL2b_0212.00003050 456
330 3300005289 Ga0065704_10076452 Ga0065704_100764522 456
331 3300005289 Ga0065704_10113885 Ga0065704_101138852 456
332 3300009148 Ga0105243_10000011 Ga0105243_100000116 456
333 3300025935 Ga0207709_10000034 Ga0207709_100000347 456

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

83

257

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.9164 4 441
1olt-assembly1.cif.gz_A coproporphyrinogen iii oxidase (hemn) from escherichia coli is a radical sam enzyme. 0.9123 4 441
6b4c-assembly10.cif.gz_J structure of viperin from trichoderma virens 0.7477 58 245
6b4c-assembly8.cif.gz_H structure of viperin from trichoderma virens 0.7336 58 282
6b4c-assembly2.cif.gz_B structure of viperin from trichoderma virens 0.7291 58 282
ID Description Score Start End Superfamily
af_P32131_50_279_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9213 54 284 3.20.20.70
af_P32131_50_279_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9137 54 284 3.20.20.70
1oltA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.8956 370 441 1.10.10.920
af_P52062_9_222_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.8699 60 276 3.80.30.20
af_Q2FXY9_7_216_3.80.30.20 Alpha Beta;Alpha-Beta Horseshoe;pyruvate-formate lyase- activating enzyme;tm_1862 like domain 0.866 60 276 3.80.30.20
ID Description Score Start End GO Terms
AF-A0A7H0VIL1-F1-model_v4 Coproporphyrinogen-III oxidase (EC 1.3.98.3) 0.9547 7 450 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A259HYE3-F1-model_v4 Coproporphyrinogen-III oxidase (EC 1.3.98.3) 0.9544 4 456 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A1F9GKN7-F1-model_v4 Coproporphyrinogen-III oxidase (EC 1.3.98.3) 0.9486 7 439 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-A0A496XUC1-F1-model_v4 Coproporphyrinogen-III oxidase (EC 1.3.98.3) 0.9484 8 453 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989
AF-T0DL08-F1-model_v4 Coproporphyrinogen-III oxidase (EC 1.3.98.3) 0.9479 10 447 GO:0004109
GO:0005737
GO:0006782
GO:0046872
GO:0051539
GO:0051989

Feature Viewer

pLDDT pTM Quality
86.45 0.88 High
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Predicted Structure (AlphaFold2)

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Map