F409583

General Info

Members Datasets Scaffolds Average Seq Length
329 194 658 362

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100000872|Ga0070697_10000087210
Length 384
Sequence MTPMVRVLVVDDSALMRKLIPQILQTDGSIQVVGTAMDGNFGLKKIEELKPQVVTLDLEMPGMGGLEMLKEIMRRHRVPVIVVSSHSTQGASVTLQALSLGAFDFVAKPHDVWARMPEIAQELIAKIKAAAQSRGVRVRPVPETLQRAEKVSLDAKKPPTKVVAIGISTGGPQTLQYVLSQLPGDFPGTILVVQHMPEGFTEMFARRLDEICAIGVKEAQSGDLLLPGRVLICPGSRHLKVKRLPLGDVAVLSDDPRVNGHRPSADVLFRSLAEEFGPKGIAVLMTGMGEDGAQGMGAVKAAGGMTIAQSEDSCVVYGMPKAAIDRGHAVRVVGLDVLANTLMAQCMQDRLGTAASQPGDGGKAAGPDWTSFLPGKHEPDAGSD

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
48 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
82 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
83 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
84 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
120 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
124 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
125 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
126 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
127 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
128 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
129 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300030889 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
131 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
132 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
133 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
134 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
135 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
136 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
137 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
138 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
139 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
140 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
141 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
142 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
143 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
144 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
145 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
146 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
147 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
148 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
149 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
150 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
151 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
152 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
153 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
154 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
155 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
156 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
157 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
158 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
159 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
160 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
161 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
162 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
163 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
164 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
165 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
166 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
167 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
170 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
171 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
172 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
173 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
174 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
175 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
176 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
177 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
178 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
179 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
180 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
181 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
182 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
183 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
184 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
185 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
192 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
193 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
194 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.26
Metatranscriptomes 1.82
Isolates 0.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.22
Nodule 0.3
Rhizoplane 8.51
Rhizosphere 88.15
Stem 0
Stem Tuber 0
Unclassified 7.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100000872 3300005536 Bacteria 22677
2 LJNas_1000607 3300000546 Bacteria 6099
3 Ga0070690_100037901 3300005330 Bacteria 3039
4 Ga0070670_100149258 3300005331 Bacteria 2023
5 Ga0068869_100023843 3300005334 Bacteria 4234
6 Ga0070666_10154584 3300005335 Bacteria 1601
7 Ga0070680_100118811 3300005336 Bacteria 2205
8 Ga0070682_100000443 3300005337 Bacteria 26576
9 Ga0068868_100008835 3300005338 Bacteria 7218
10 Ga0068868_100027709 3300005338 Bacteria 4323
11 Ga0070687_100201424 3300005343 Bacteria 1206
12 Ga0070668_100049564 3300005347 Bacteria 3231
13 Ga0070659_100132317 3300005366 Bacteria 2026
14 Ga0070667_100018445 3300005367 Bacteria 5786
15 Ga0070709_10035701 3300005434 Bacteria 3023
16 Ga0070709_10038904 3300005434 Bacteria 2915
17 Ga0070709_10070647 3300005434 Bacteria 2251
18 Ga0070709_10151745 3300005434 Bacteria 1602
19 Ga0070714_100011660 3300005435 Bacteria 6978
20 Ga0070714_100319881 3300005435 Bacteria 1451
21 Ga0070713_100101831 3300005436 Unclassified 2489
22 Ga0070713_100283197 3300005436 Bacteria 1521
23 Ga0070710_10019561 3300005437 Bacteria 3501
24 Ga0070710_10142058 3300005437 Unclassified 1473
25 Ga0070711_100058121 3300005439 Bacteria 2680
26 Ga0070700_100074352 3300005441 Bacteria 2177
27 Ga0070708_100000418 3300005445 Bacteria 31903
28 Ga0070708_100001358 3300005445 Bacteria 18662
29 Ga0070708_100010584 3300005445 Bacteria 7480
30 Ga0070708_100012504 3300005445 Bacteria 6928
31 Ga0070708_100016302 3300005445 Bacteria 6163
32 Ga0070708_100044220 3300005445 Bacteria 3915
33 Ga0070708_100044658 3300005445 Bacteria 3898
34 Ga0070708_100093510 3300005445 Bacteria 2741
35 Ga0070663_100096558 3300005455 Bacteria 2198
36 Ga0070662_100077872 3300005457 Bacteria 2461
37 Ga0070681_10135332 3300005458 Bacteria 2395
38 Ga0068867_100065906 3300005459 Bacteria 2696
39 Ga0068867_100083531 3300005459 Bacteria 2411
40 Ga0070706_100000173 3300005467 Bacteria 81500
41 Ga0070706_100226266 3300005467 Bacteria 1746
42 Ga0070707_100000719 3300005468 Bacteria 33081
43 Ga0070707_100012053 3300005468 Bacteria 8070
44 Ga0070707_100057513 3300005468 Bacteria 3730
45 Ga0070707_100178734 3300005468 Unclassified 2069
46 Ga0070698_100000162 3300005471 Bacteria 61345
47 Ga0070699_100002540 3300005518 Bacteria 16392
48 Ga0070699_100004218 3300005518 Bacteria 12713
49 Ga0070699_100012258 3300005518 Bacteria 7396
50 Ga0070679_100253771 3300005530 Unclassified 1714
51 Ga0070684_100026314 3300005535 Bacteria 4900
52 Ga0070697_100000554 3300005536 Bacteria 28090
53 Ga0070697_100001177 3300005536 Bacteria 19808
54 Ga0070697_100001505 3300005536 Bacteria 17701
55 Ga0070697_100024488 3300005536 Bacteria 4804
56 Ga0068853_100065218 3300005539 Bacteria 3160
57 Ga0070696_100128488 3300005546 Bacteria 1841
58 Ga0070665_100034765 3300005548 Bacteria 5069
59 Ga0070665_100077747 3300005548 Bacteria 3324
60 Ga0070665_100171349 3300005548 Bacteria 2171
61 Ga0068855_100005363 3300005563 Bacteria 15639
62 Ga0068855_100286889 3300005563 Bacteria 1826
63 Ga0070664_100017362 3300005564 Bacteria 5909
64 Ga0068857_100078109 3300005577 Bacteria 2954
65 Ga0068856_100034355 3300005614 Bacteria 4966
66 Ga0068856_100060078 3300005614 Bacteria 3756
67 Ga0068856_100182145 3300005614 Bacteria 2114
68 Ga0068856_100201438 3300005614 Unclassified 2005
69 Ga0068852_100006784 3300005616 Bacteria 8307
70 Ga0068859_100057545 3300005617 Bacteria 3916
71 Ga0068864_100091879 3300005618 Bacteria 2678
72 Ga0068851_10044924 3300005834 Bacteria 2232
73 Ga0068863_100015876 3300005841 Bacteria 7223
74 Ga0068863_100022858 3300005841 Bacteria 5975
75 Ga0068863_100100779 3300005841 Bacteria 2745
76 Ga0068863_100405050 3300005841 Bacteria 1335
77 Ga0068858_100011767 3300005842 Bacteria 8254
78 Ga0068858_100274113 3300005842 Bacteria 1606
79 Ga0068860_100054549 3300005843 Bacteria 3799
80 Ga0068862_100038209 3300005844 Bacteria 4071
81 Ga0068862_100116554 3300005844 Bacteria 2350
82 Ga0070717_10000612 3300006028 Bacteria 22915
83 Ga0070717_10001449 3300006028 Bacteria 16366
84 Ga0070717_10021325 3300006028 Bacteria 5103
85 Ga0070717_10024145 3300006028 Bacteria 4824
86 Ga0070717_10310591 3300006028 Bacteria 1403
87 Ga0070717_10341254 3300006028 Bacteria 1338
88 Ga0070716_100000315 3300006173 Bacteria 19472
89 Ga0070716_100042111 3300006173 Bacteria 2548
90 Ga0070716_100149076 3300006173 Bacteria 1502
91 Ga0070712_100061623 3300006175 Bacteria 2651
92 Ga0070712_100068966 3300006175 Bacteria 2521
93 Ga0070712_100114393 3300006175 Bacteria 2020
94 Ga0075366_10036495 3300006195 Bacteria 2898
95 Ga0075366_10069712 3300006195 Bacteria 2093
96 Ga0097621_100008160 3300006237 Bacteria 7529
97 Ga0068871_100007947 3300006358 Bacteria 7605
98 Ga0075433_10001164 3300006852 Bacteria 19108
99 Ga0075433_10030323 3300006852 Bacteria 4613
100 Ga0075434_100000041 3300006871 Bacteria 59536
101 Ga0075429_100074924 3300006880 Unclassified 2948
102 Ga0068865_100056610 3300006881 Bacteria 2733
103 Ga0075436_100006992 3300006914 Bacteria 7726
104 Ga0097620_100057545 3300006931 Bacteria 3916
105 Ga0075435_100000105 3300007076 Bacteria 45736
106 Ga0105240_10049302 3300009093 Bacteria 5316
107 Ga0105240_10063205 3300009093 Bacteria 4605
108 Ga0105240_10408648 3300009093 Bacteria 1527
109 Ga0105247_10098754 3300009101 Bacteria 1864
110 Ga0114129_10001996 3300009147 Bacteria 27925
111 Ga0114129_10244581 3300009147 Bacteria 2411
112 Ga0114129_10258114 3300009147 Bacteria 2337
113 Ga0105241_10013091 3300009174 Bacteria 6084
114 Ga0105242_10019771 3300009176 Bacteria 5277
115 Ga0105242_10167972 3300009176 Bacteria 1926
116 Ga0105242_10225697 3300009176 Bacteria 1676
117 Ga0105242_10431774 3300009176 Bacteria 1237
118 Ga0105248_10028944 3300009177 Bacteria 6175
119 Ga0105248_10075687 3300009177 Bacteria 3783
120 Ga0105237_10051348 3300009545 Bacteria 4141
121 Ga0105237_10335519 3300009545 Unclassified 1516
122 Ga0105237_10351759 3300009545 Bacteria 1478
123 Ga0105238_10091469 3300009551 Bacteria 3030
124 Ga0105238_10130121 3300009551 Bacteria 2495
125 Ga0105249_10118256 3300009553 Bacteria 2515
126 Ga0099796_10021859 3300010159 Bacteria 1977
127 Ga0105239_10025901 3300010375 Bacteria 6459
128 Ga0105239_10117684 3300010375 Bacteria 2949
129 Ga0105239_10156436 3300010375 Bacteria 2545
130 Ga0105239_10387537 3300010375 Bacteria 1580
131 Ga0105239_10532159 3300010375 Bacteria 1337
132 Ga0105246_10090914 3300011119 Bacteria 2199
133 Ga0157373_10166119 3300013100 Bacteria 1553
134 Ga0157369_10048103 3300013105 Bacteria 4629
135 Ga0157374_10022496 3300013296 Bacteria 5623
136 Ga0157374_10179039 3300013296 Bacteria 2070
137 Ga0157374_10272261 3300013296 Unclassified 1670
138 Ga0157378_10010049 3300013297 Bacteria 8247
139 Ga0157378_10282841 3300013297 Unclassified 1599
140 Ga0163162_10027267 3300013306 Bacteria 5648
141 Ga0163162_10029047 3300013306 Bacteria 5472
142 Ga0157372_10046704 3300013307 Bacteria 4807
143 Ga0157372_10188581 3300013307 Bacteria 2388
144 Ga0157372_10318119 3300013307 Bacteria 1812
145 Ga0157375_10002000 3300013308 Bacteria 17578
146 Ga0157375_10160942 3300013308 Unclassified 2386
147 Ga0163163_10002234 3300014325 Bacteria 16305
148 Ga0163163_10083869 3300014325 Bacteria 3192
149 Ga0157379_10010531 3300014968 Bacteria 8061
150 Ga0157379_10090920 3300014968 Bacteria 2738
151 Ga0157376_10017009 3300014969 Bacteria 5536
152 Ga0157376_10021914 3300014969 Bacteria 4969
153 Ga0157376_10035919 3300014969 Bacteria 4011
154 Ga0213874_10001642 3300021377 Bacteria 4698
155 Ga0224570_100064 3300022730 Bacteria 5809
156 Ga0228598_1000816 3300024227 Bacteria 6714
157 Ga0207710_10088455 3300025900 Unclassified 1446
158 Ga0207680_10024686 3300025903 Bacteria 3303
159 Ga0207647_10008016 3300025904 Bacteria 7596
160 Ga0207685_10008239 3300025905 Bacteria 2956
161 Ga0207699_10015400 3300025906 Bacteria 3970
162 Ga0207699_10060749 3300025906 Bacteria 2271
163 Ga0207645_10007967 3300025907 Bacteria 7435
164 Ga0207684_10000267 3300025910 Bacteria 77172
165 Ga0207684_10154346 3300025910 Bacteria 1976
166 Ga0207695_10027763 3300025913 Bacteria 6297
167 Ga0207693_10029248 3300025915 Bacteria 4353
168 Ga0207693_10053260 3300025915 Bacteria 3175
169 Ga0207693_10081987 3300025915 Bacteria 2526
170 Ga0207663_10002155 3300025916 Bacteria 9394
171 Ga0207657_10010586 3300025919 Bacteria 9195
172 Ga0207649_10111943 3300025920 Bacteria 1825
173 Ga0207646_10000296 3300025922 Bacteria 67683
174 Ga0207646_10095550 3300025922 Bacteria 2662
175 Ga0207646_10205062 3300025922 Unclassified 1781
176 Ga0207646_10243959 3300025922 Bacteria 1623
177 Ga0207646_10244408 3300025922 Unclassified 1621
178 Ga0207687_10018290 3300025927 Bacteria 4624
179 Ga0207700_10030601 3300025928 Bacteria 3814
180 Ga0207700_10096405 3300025928 Bacteria 2348
181 Ga0207664_10090654 3300025929 Bacteria 2505
182 Ga0207664_10123461 3300025929 Bacteria 2171
183 Ga0207664_10251713 3300025929 Bacteria 1542
184 Ga0207690_10078628 3300025932 Bacteria 2296
185 Ga0207706_10000670 3300025933 Bacteria 35982
186 Ga0207706_10037188 3300025933 Unclassified 4323
187 Ga0207686_10060061 3300025934 Bacteria 2405
188 Ga0207704_10205493 3300025938 Bacteria 1445
189 Ga0207665_10001184 3300025939 Bacteria 17548
190 Ga0207665_10044443 3300025939 Bacteria 2973
191 Ga0207665_10072083 3300025939 Bacteria 2359
192 Ga0207665_10202660 3300025939 Unclassified 1446
193 Ga0207711_10048127 3300025941 Bacteria 3648
194 Ga0207711_10074617 3300025941 Bacteria 2950
195 Ga0207689_10033739 3300025942 Bacteria 4252
196 Ga0207689_10110928 3300025942 Bacteria 2254
197 Ga0207667_10011479 3300025949 Bacteria 10291
198 Ga0207667_10334031 3300025949 Bacteria 1547
199 Ga0207712_10023953 3300025961 Bacteria 4035
200 Ga0207668_10313397 3300025972 Bacteria 1299
201 Ga0207640_10097540 3300025981 Bacteria 2052
202 Ga0207658_10170876 3300025986 Bacteria 1791
203 Ga0207703_10003518 3300026035 Bacteria 13098
204 Ga0207703_10128881 3300026035 Bacteria 2182
205 Ga0207678_10001418 3300026067 Bacteria 21972
206 Ga0207641_10025134 3300026088 Unclassified 4910
207 Ga0207641_10152596 3300026088 Bacteria 2093
208 Ga0207648_10015573 3300026089 Bacteria 6986
209 Ga0207676_10087528 3300026095 Bacteria 2548
210 Ga0207674_10103746 3300026116 Unclassified 2822
211 Ga0207698_10371705 3300026142 Bacteria 1357
212 Ga0265356_1000336 3300028017 Bacteria 8653
213 Ga0265355_1002167 3300028036 Bacteria 1351
214 Ga0268265_10044382 3300028380 Bacteria 3310
215 Ga0268265_10225692 3300028380 Bacteria 1642
216 Ga0268264_10077395 3300028381 Bacteria 2833
217 Ga0265337_1001714 3300028556 Bacteria 10604
218 Ga0265326_10009564 3300028558 Unclassified 2900
219 Ga0265319_1000207 3300028563 Bacteria 44538
220 Ga0265319_1016173 3300028563 Bacteria 2866
221 Ga0265336_10000195 3300028666 Bacteria 42557
222 Ga0265338_10000308 3300028800 Bacteria 88378
223 Ga0265338_10001126 3300028800 Bacteria 44323
224 Ga0265338_10130056 3300028800 Bacteria 1990
225 Ga0265324_10030821 3300029957 Bacteria 1880
226 Ga0265762_1001390 3300030760 Bacteria 4393
227 Ga0265762_1008918 3300030760 Unclassified 1786
228 Ga0265761_100056 3300030889 Bacteria 3471
229 Ga0265760_10001481 3300031090 Bacteria 6917
230 Ga0265760_10016327 3300031090 Bacteria 2130
231 Ga0265760_10019111 3300031090 Bacteria 1974
232 Ga0265332_10007673 3300031238 Bacteria 4874
233 Ga0265332_10007768 3300031238 Bacteria 4843
234 Ga0265320_10000491 3300031240 Bacteria 30804
235 Ga0265320_10054155 3300031240 Bacteria 1936
236 Ga0265340_10013183 3300031247 Unclassified 4350
237 Ga0265340_10014473 3300031247 Bacteria 4118
238 Ga0265339_10000238 3300031249 Bacteria 44271
239 Ga0265339_10120299 3300031249 Unclassified 1350
240 Ga0265316_10002971 3300031344 Bacteria 17338
241 Ga0265313_10001458 3300031595 Bacteria 22081
242 Ga0265314_10000002 3300031711 Bacteria 2092193
243 Ga0265314_10023458 3300031711 Bacteria 4704
244 Ga0265342_10003010 3300031712 Bacteria 14125
245 Ga0316576_10077683 3300031727 Bacteria 2459
246 Ga0307405_10022862 3300031731 Bacteria 3543
247 Ga0316212_1013311 3300033547 Bacteria 1167
248 Ga0373936_0000006 3300035113 Bacteria 318697
249 Ga0373936_0006441 3300035113 Bacteria 4428
250 Ga0373955_0095747 3300035172 Bacteria 1698
251 Ga0373942_0007511 3300035207 Archaea 2530
252 Ga0373931_0024119 3300035691 Bacteria 3078
253 Ga0373931_0070809 3300035691 Bacteria 1903
254 Ga0373931_0163265 3300035691 Bacteria 1307
255 Ga0373935_0022633 3300035692 Bacteria 3856
256 Ga0373935_0110597 3300035692 Unclassified 1823
257 Ga0373927_0021367 3300035695 Bacteria 4242
258 Ga0373927_0191854 3300035695 Bacteria 1340
259 Ga0373933_0020345 3300035724 Bacteria 3762
260 Ga0373933_0085091 3300035724 Bacteria 1944
261 Ga0373947_0035974 3300035725 Bacteria 2934
262 Ga0373947_0040187 3300035725 Bacteria 2786
263 Ga0373947_0127310 3300035725 Unclassified 1623
264 Ga0373937_0011016 3300036401 Bacteria 7926
265 Ga0373925_0047253 3300037068 Bacteria 3204
266 Ga0436360_0472270 3300039438 Bacteria 1044
267 Ga0436363_0486095 3300039450 Bacteria 3170
268 Ga0436363_0609679 3300039450 Bacteria 2030
269 Ga0436363_1421966 3300039450 Bacteria 9640
270 Ga0436362_0326037 3300039453 Bacteria 5492
271 Ga0451577_0000225 3300042876 Bacteria 116091
272 Ga0466966_0091245 3300044684 Bacteria 1891
273 Ga0466963_0192663 3300044694 Bacteria 1424
274 Ga0453684_0005035 3300044712 Bacteria 26803
275 Ga0453684_0005125 3300044712 Bacteria 26380
276 Ga0451576_0192869 3300045051 Bacteria 2128
277 Ga0466967_0036114 3300045976 Bacteria 4216
278 Ga0466967_0076078 3300045976 Bacteria 3018
279 Ga0495580_0009626 3300046472 Bacteria 7588
280 Ga0495580_0016136 3300046472 Bacteria 5613
281 Ga0495580_0047868 3300046472 Bacteria 3030
282 Ga0495584_0018151 3300046491 Bacteria 3577
283 Ga0495621_0014706 3300046539 Bacteria 2482
284 Ga0495621_0018339 3300046539 Bacteria 2272
285 Ga0495669_0017568 3300046684 Bacteria 3070
286 Ga0495581_0083593 3300047315 Bacteria 1849
287 Ga0495680_0244039 3300047322 Bacteria 1275
288 Ga0495602_0040732 3300048088 Unclassified 4254
289 Ga0496100_0009722 3300048903 Bacteria 5413
290 Ga0496100_0084568 3300048903 Bacteria 2151
291 Ga0496101_0019851 3300048904 Bacteria 4595
292 Ga0496101_0029423 3300048904 Bacteria 3842
293 Ga0496102_0001424 3300048905 Bacteria 21214
294 Ga0496102_0225889 3300048905 Bacteria 1765
295 Ga0496102_0342748 3300048905 Unclassified 1407
296 Ga0496103_0004119 3300048906 Bacteria 8825
297 Ga0496103_0100179 3300048906 Bacteria 1833
298 Ga0496104_0126778 3300048907 Bacteria 2451
299 Ga0496105_0022104 3300048908 Bacteria 5152
300 Ga0496105_0236927 3300048908 Bacteria 1482
301 Ga0496106_0117895 3300048909 Bacteria 2072
302 Ga0496107_0025291 3300048910 Bacteria 4203
303 Ga0496107_0052688 3300048910 Bacteria 2935
304 Ga0496108_0066587 3300048911 Bacteria 3038
305 Ga0496108_0124906 3300048911 Bacteria 2209
306 Ga0496108_0247628 3300048911 Bacteria 1550
307 Ga0496109_0054749 3300048912 Bacteria 3639
308 Ga0496109_0071617 3300048912 Unclassified 3183
309 Ga0496110_0115435 3300048913 Bacteria 2417
310 Ga0496112_0026656 3300048915 Bacteria 5566
311 Ga0496112_0039307 3300048915 Bacteria 4623
312 Ga0496112_0060915 3300048915 Bacteria 3719
313 Ga0496112_0081816 3300048915 Bacteria 3194
314 Ga0496113_0042637 3300048916 Bacteria 3354
315 Ga0496114_0154107 3300048917 Bacteria 1994
316 Ga0496115_0003148 3300048918 Bacteria 11863
317 Ga0495682_0087063 3300049460 Bacteria 1123
318 nmdc:mga0k408_1413_c1 3300050493 Bacteria 12972
319 nmdc:mga0k408_78505_c1 3300050493 Bacteria 1931
320 nmdc:mga05p37_550483_c1 3300050507 Bacteria 1313
321 nmdc:mga09592_125184_c1 3300050508 Bacteria 2209
322 nmdc:mga0n895_47_c1 3300050512 Bacteria 73703
323 nmdc:mga0rr50_370781_c1 3300050513 Bacteria 1206
324 nmdc:mga0rr50_421_c1 3300050513 Bacteria 22898
325 nmdc:mga0a205_378_c1 3300050515 Bacteria 33792
326 Ga0495601_0133299 3300053077 Bacteria 1619
327 2874128264 2874123672 Bacteria 7238285
328 2881645749 2881644220 Bacteria 5302661
329 8057477615 8057473075 Bacteria 5892720
330 Ga0070697_100000872
331 LJNas_1000607
332 Ga0070690_100037901
333 Ga0070670_100149258
334 Ga0068869_100023843
335 Ga0070666_10154584
336 Ga0070680_100118811
337 Ga0070682_100000443
338 Ga0068868_100008835
339 Ga0068868_100027709
340 Ga0070687_100201424
341 Ga0070668_100049564
342 Ga0070659_100132317
343 Ga0070667_100018445
344 Ga0070709_10035701
345 Ga0070709_10038904
346 Ga0070709_10070647
347 Ga0070709_10151745
348 Ga0070714_100011660
349 Ga0070714_100319881
350 Ga0070713_100101831
351 Ga0070713_100283197
352 Ga0070710_10019561
353 Ga0070710_10142058
354 Ga0070711_100058121
355 Ga0070700_100074352
356 Ga0070708_100000418
357 Ga0070708_100001358
358 Ga0070708_100010584
359 Ga0070708_100012504
360 Ga0070708_100016302
361 Ga0070708_100044220
362 Ga0070708_100044658
363 Ga0070708_100093510
364 Ga0070663_100096558
365 Ga0070662_100077872
366 Ga0070681_10135332
367 Ga0068867_100065906
368 Ga0068867_100083531
369 Ga0070706_100000173
370 Ga0070706_100226266
371 Ga0070707_100000719
372 Ga0070707_100012053
373 Ga0070707_100057513
374 Ga0070707_100178734
375 Ga0070698_100000162
376 Ga0070699_100002540
377 Ga0070699_100004218
378 Ga0070699_100012258
379 Ga0070679_100253771
380 Ga0070684_100026314
381 Ga0070697_100000554
382 Ga0070697_100001177
383 Ga0070697_100001505
384 Ga0070697_100024488
385 Ga0068853_100065218
386 Ga0070696_100128488
387 Ga0070665_100034765
388 Ga0070665_100077747
389 Ga0070665_100171349
390 Ga0068855_100005363
391 Ga0068855_100286889
392 Ga0070664_100017362
393 Ga0068857_100078109
394 Ga0068856_100034355
395 Ga0068856_100060078
396 Ga0068856_100182145
397 Ga0068856_100201438
398 Ga0068852_100006784
399 Ga0068859_100057545
400 Ga0068864_100091879
401 Ga0068851_10044924
402 Ga0068863_100015876
403 Ga0068863_100022858
404 Ga0068863_100100779
405 Ga0068863_100405050
406 Ga0068858_100011767
407 Ga0068858_100274113
408 Ga0068860_100054549
409 Ga0068862_100038209
410 Ga0068862_100116554
411 Ga0070717_10000612
412 Ga0070717_10001449
413 Ga0070717_10021325
414 Ga0070717_10024145
415 Ga0070717_10310591
416 Ga0070717_10341254
417 Ga0070716_100000315
418 Ga0070716_100042111
419 Ga0070716_100149076
420 Ga0070712_100061623
421 Ga0070712_100068966
422 Ga0070712_100114393
423 Ga0075366_10036495
424 Ga0075366_10069712
425 Ga0097621_100008160
426 Ga0068871_100007947
427 Ga0075433_10001164
428 Ga0075433_10030323
429 Ga0075434_100000041
430 Ga0075429_100074924
431 Ga0068865_100056610
432 Ga0075436_100006992
433 Ga0097620_100057545
434 Ga0075435_100000105
435 Ga0105240_10049302
436 Ga0105240_10063205
437 Ga0105240_10408648
438 Ga0105247_10098754
439 Ga0114129_10001996
440 Ga0114129_10244581
441 Ga0114129_10258114
442 Ga0105241_10013091
443 Ga0105242_10019771
444 Ga0105242_10167972
445 Ga0105242_10225697
446 Ga0105242_10431774
447 Ga0105248_10028944
448 Ga0105248_10075687
449 Ga0105237_10051348
450 Ga0105237_10335519
451 Ga0105237_10351759
452 Ga0105238_10091469
453 Ga0105238_10130121
454 Ga0105249_10118256
455 Ga0099796_10021859
456 Ga0105239_10025901
457 Ga0105239_10117684
458 Ga0105239_10156436
459 Ga0105239_10387537
460 Ga0105239_10532159
461 Ga0105246_10090914
462 Ga0157373_10166119
463 Ga0157369_10048103
464 Ga0157374_10022496
465 Ga0157374_10179039
466 Ga0157374_10272261
467 Ga0157378_10010049
468 Ga0157378_10282841
469 Ga0163162_10027267
470 Ga0163162_10029047
471 Ga0157372_10046704
472 Ga0157372_10188581
473 Ga0157372_10318119
474 Ga0157375_10002000
475 Ga0157375_10160942
476 Ga0163163_10002234
477 Ga0163163_10083869
478 Ga0157379_10010531
479 Ga0157379_10090920
480 Ga0157376_10017009
481 Ga0157376_10021914
482 Ga0157376_10035919
483 Ga0213874_10001642
484 Ga0224570_100064
485 Ga0228598_1000816
486 Ga0207710_10088455
487 Ga0207680_10024686
488 Ga0207647_10008016
489 Ga0207685_10008239
490 Ga0207699_10015400
491 Ga0207699_10060749
492 Ga0207645_10007967
493 Ga0207684_10000267
494 Ga0207684_10154346
495 Ga0207695_10027763
496 Ga0207693_10029248
497 Ga0207693_10053260
498 Ga0207693_10081987
499 Ga0207663_10002155
500 Ga0207657_10010586
501 Ga0207649_10111943
502 Ga0207646_10000296
503 Ga0207646_10095550
504 Ga0207646_10205062
505 Ga0207646_10243959
506 Ga0207646_10244408
507 Ga0207687_10018290
508 Ga0207700_10030601
509 Ga0207700_10096405
510 Ga0207664_10090654
511 Ga0207664_10123461
512 Ga0207664_10251713
513 Ga0207690_10078628
514 Ga0207706_10000670
515 Ga0207706_10037188
516 Ga0207686_10060061
517 Ga0207704_10205493
518 Ga0207665_10001184
519 Ga0207665_10044443
520 Ga0207665_10072083
521 Ga0207665_10202660
522 Ga0207711_10048127
523 Ga0207711_10074617
524 Ga0207689_10033739
525 Ga0207689_10110928
526 Ga0207667_10011479
527 Ga0207667_10334031
528 Ga0207712_10023953
529 Ga0207668_10313397
530 Ga0207640_10097540
531 Ga0207658_10170876
532 Ga0207703_10003518
533 Ga0207703_10128881
534 Ga0207678_10001418
535 Ga0207641_10025134
536 Ga0207641_10152596
537 Ga0207648_10015573
538 Ga0207676_10087528
539 Ga0207674_10103746
540 Ga0207698_10371705
541 Ga0265356_1000336
542 Ga0265355_1002167
543 Ga0268265_10044382
544 Ga0268265_10225692
545 Ga0268264_10077395
546 Ga0265337_1001714
547 Ga0265326_10009564
548 Ga0265319_1000207
549 Ga0265319_1016173
550 Ga0265336_10000195
551 Ga0265338_10000308
552 Ga0265338_10001126
553 Ga0265338_10130056
554 Ga0265324_10030821
555 Ga0265762_1001390
556 Ga0265762_1008918
557 Ga0265761_100056
558 Ga0265760_10001481
559 Ga0265760_10016327
560 Ga0265760_10019111
561 Ga0265332_10007673
562 Ga0265332_10007768
563 Ga0265320_10000491
564 Ga0265320_10054155
565 Ga0265340_10013183
566 Ga0265340_10014473
567 Ga0265339_10000238
568 Ga0265339_10120299
569 Ga0265316_10002971
570 Ga0265313_10001458
571 Ga0265314_10000002
572 Ga0265314_10023458
573 Ga0265342_10003010
574 Ga0316576_10077683
575 Ga0307405_10022862
576 Ga0316212_1013311
577 Ga0373936_0000006
578 Ga0373936_0006441
579 Ga0373955_0095747
580 Ga0373942_0007511
581 Ga0373931_0024119
582 Ga0373931_0070809
583 Ga0373931_0163265
584 Ga0373935_0022633
585 Ga0373935_0110597
586 Ga0373927_0021367
587 Ga0373927_0191854
588 Ga0373933_0020345
589 Ga0373933_0085091
590 Ga0373947_0035974
591 Ga0373947_0040187
592 Ga0373947_0127310
593 Ga0373937_0011016
594 Ga0373925_0047253
595 Ga0436360_0472270
596 Ga0436363_0486095
597 Ga0436363_0609679
598 Ga0436363_1421966
599 Ga0436362_0326037
600 Ga0451577_0000225
601 Ga0466966_0091245
602 Ga0466963_0192663
603 Ga0453684_0005035
604 Ga0453684_0005125
605 Ga0451576_0192869
606 Ga0466967_0036114
607 Ga0466967_0076078
608 Ga0495580_0009626
609 Ga0495580_0016136
610 Ga0495580_0047868
611 Ga0495584_0018151
612 Ga0495621_0014706
613 Ga0495621_0018339
614 Ga0495669_0017568
615 Ga0495581_0083593
616 Ga0495680_0244039
617 Ga0495602_0040732
618 Ga0496100_0009722
619 Ga0496100_0084568
620 Ga0496101_0019851
621 Ga0496101_0029423
622 Ga0496102_0001424
623 Ga0496102_0225889
624 Ga0496102_0342748
625 Ga0496103_0004119
626 Ga0496103_0100179
627 Ga0496104_0126778
628 Ga0496105_0022104
629 Ga0496105_0236927
630 Ga0496106_0117895
631 Ga0496107_0025291
632 Ga0496107_0052688
633 Ga0496108_0066587
634 Ga0496108_0124906
635 Ga0496108_0247628
636 Ga0496109_0054749
637 Ga0496109_0071617
638 Ga0496110_0115435
639 Ga0496112_0026656
640 Ga0496112_0039307
641 Ga0496112_0060915
642 Ga0496112_0081816
643 Ga0496113_0042637
644 Ga0496114_0154107
645 Ga0496115_0003148
646 Ga0495682_0087063
647 nmdc:mga0k408_1413_c1
648 nmdc:mga0k408_78505_c1
649 nmdc:mga05p37_550483_c1
650 nmdc:mga09592_125184_c1
651 nmdc:mga0n895_47_c1
652 nmdc:mga0rr50_370781_c1
653 nmdc:mga0rr50_421_c1
654 nmdc:mga0a205_378_c1
655 Ga0495601_0133299
656 2874128264
657 2881645749
658 8057477615

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01339

CheB_methylest

CheB methylesterase

163

342

0.95

PF00072

Response_reg

Response regulator receiver domain

7

117

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1chd-assembly1.cif.gz_A cheb methylesterase domain 0.9824 161 342
3sft-assembly1.cif.gz_A crystal structure of thermotoga maritima cheb methylesterase catalytic domain 0.978 161 345
3sft-assembly1.cif.gz_A crystal structure of thermotoga maritima cheb methylesterase catalytic domain 0.9527 161 345
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.9322 5 131
6ymz-assembly5.cif.gz_E structure of the cheb methylsterase from p. atrosepticum scri1043 0.9265 1 347
ID Description Score Start End Superfamily
3sftA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.978 161 345 3.40.50.180
af_P07330_147_349_3.40.50.180 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.9696 160 351 3.40.50.180
3c3wB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9632 4 81 3.40.50.2300
3sftA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.9527 161 345 3.40.50.180
af_Q2FVQ9_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9348 4 81 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2V8WZ37-F1-model_v4 protein-glutamate methylesterase (EC 3.1.1.61) 0.9908 273 345 GO:0000156
GO:0005737
GO:0006935
GO:0008984
AF-A0A381EZK3-F1-model_v4 deleted 0.9897 266 346
AF-A0A1E7WKD4-F1-model_v4 deleted 0.9807 160 346
AF-A0A350VCR1-F1-model_v4 deleted 0.9792 277 344
AF-A0A7Z9QTH3-F1-model_v4 protein-glutamate methylesterase (EC 3.1.1.61) 0.977 159 343 GO:0000156
GO:0005737
GO:0006935
GO:0008984

Map