F409573

General Info

Members Datasets Scaffolds Average Seq Length
329 214 658 520

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100008935|Ga0070706_1000089352
Length 601
Sequence MQRTAEDMKDDQDSEPQLPDSEPQGDSYKASSPDLTEGTETFQINRNATEAAGETIAVVGESTGRFPRAPSYEQSESEGTGKHAMMVGAGILISRIIGVARQRVFAYYLGTSDAAGAFSAAFRIPNFLQNVFGEGALSASFIPVYANLLARGDKKEASRVADAVLTMLALTTSIIVLLGVLTTPFFVGLFAHSFSAAARELTIQLVRILFPGAGLLVLSAWCLGVLNSHRRFFLSYTAPVVWNLAIIATLVFFGTRQDQFHLATFTAWGSVVGSALQFGVQLPTILKLIGRLRPVLDIASENVRTVLRNFFPVFMSRGVVQISAFVDAMLAGLISEQAVAALMYAQSLYTLPVSLFGMSISAAELPAMSSALGTTTQIADQLRHRLSEGLSRIAFFIVPSVMAMMAFGDVMTGALYQTGKFGRADSKYVWGILAGSTIGLLASTLGRLYASTFYALHDTRTPLRYAVIRVVLTTGLGYLCAIPLPRLIGLDPKWGAAGLTTSAGVAGWIEFSLLRRSLNNRIGRTGLAFAYVSKLWLAAAIGAGIGWAIKLVIGVRHPVIVAALVLVPYGLIYFAITSALQVPEANAVVGRALRMIGFNRN

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
9 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
10 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
11 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
12 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
13 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
78 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
84 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
86 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
87 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
90 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
91 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
124 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
125 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
126 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
127 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
128 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
129 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
130 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
131 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
132 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
133 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
134 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
135 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
136 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
137 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
138 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
139 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
140 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
141 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
142 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
143 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
144 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
145 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
146 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
147 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
148 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
149 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
150 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
151 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
152 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
153 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
154 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
155 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
156 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
157 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
158 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
159 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
160 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
161 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
162 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
163 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
164 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
165 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
166 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
167 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
168 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
169 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
170 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
171 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
172 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
173 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
174 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
175 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
176 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
177 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
178 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
179 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
180 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
181 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
182 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
183 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
184 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
185 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
186 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
187 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
188 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
189 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
190 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
191 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
192 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
193 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
194 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
195 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
196 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
199 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
200 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
202 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
203 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
204 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
206 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
207 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
208 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
209 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
210 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
211 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
212 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
213 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
214 2855767633 Achromobacter sp. HZ34 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.7
Metatranscriptomes 0
Isolates 0.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.16
Nodule 0.3
Rhizoplane 2.43
Rhizosphere 81.76
Stem 0
Stem Tuber 0
Unclassified 7.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100008935 3300005467 Bacteria 9331
2 JGI24748J21848_1000020 3300002074 Bacteria 114324
3 JGI24034J26672_10000002 3300002239 Bacteria 925353
4 JGI25156J39149_1001956 3300002705 Bacteria 7942
5 JGI25156J39149_1004866 3300002705 Bacteria 3997
6 JGI25157J39369_1000682 3300002741 Bacteria 18475
7 JGI25164J39214_1000113 3300002772 Bacteria 78046
8 JGI25165J46597_1000158 3300003214 Bacteria 108257
9 Ga0055539_1001566 3300003752 Bacteria 4143
10 Ga0055525_1000225 3300003759 Bacteria 61373
11 Ga0055527_1000066 3300003760 Bacteria 88276
12 Ga0055527_1000092 3300003760 Bacteria 69389
13 Ga0055527_1000340 3300003760 Bacteria 23889
14 Ga0055535_1000058 3300003761 Bacteria 125370
15 Ga0055535_1000149 3300003761 Bacteria 74091
16 Ga0055535_1000424 3300003761 Bacteria 39544
17 Ga0055535_1004112 3300003761 Bacteria 3720
18 Ga0055542_1000085 3300003762 Bacteria 125370
19 Ga0055542_1000134 3300003762 Bacteria 94890
20 Ga0055542_1000250 3300003762 Bacteria 61397
21 Ga0055542_1000503 3300003762 Bacteria 35709
22 Ga0055529_1000107 3300003763 Bacteria 122905
23 Ga0055529_1000173 3300003763 Bacteria 88663
24 Ga0070658_10006065 3300005327 Bacteria 9800
25 Ga0070658_10009143 3300005327 Bacteria 7965
26 Ga0070676_10061613 3300005328 Bacteria 2230
27 Ga0070683_100000011 3300005329 Bacteria 283682
28 Ga0070660_100005894 3300005339 Bacteria 8478
29 Ga0070661_100028980 3300005344 Bacteria 3995
30 Ga0070669_100031707 3300005353 Bacteria 3818
31 Ga0070675_100007589 3300005354 Bacteria 8391
32 Ga0070675_100011353 3300005354 Bacteria 6971
33 Ga0070674_100052431 3300005356 Bacteria 2814
34 Ga0070659_100016388 3300005366 Bacteria 5564
35 Ga0070709_10009292 3300005434 Bacteria 5417
36 Ga0070714_100001326 3300005435 Bacteria 17869
37 Ga0070713_100008800 3300005436 Bacteria 7184
38 Ga0070713_100038406 3300005436 Bacteria 3880
39 Ga0070694_100000376 3300005444 Bacteria 24006
40 Ga0070694_100002220 3300005444 Bacteria 11486
41 Ga0070708_100000059 3300005445 Bacteria 70999
42 Ga0070708_100025282 3300005445 Bacteria 5075
43 Ga0070708_100077208 3300005445 Unclassified 3009
44 Ga0070663_100035567 3300005455 Bacteria 3456
45 Ga0070681_10055440 3300005458 Bacteria 3946
46 Ga0070707_100116206 3300005468 Bacteria 2597
47 Ga0070698_100010741 3300005471 Bacteria 9743
48 Ga0070699_100005646 3300005518 Bacteria 10957
49 Ga0070699_100010916 3300005518 Bacteria 7857
50 Ga0070699_100012224 3300005518 Bacteria 7409
51 Ga0070679_100025354 3300005530 Bacteria 5818
52 Ga0070684_100000001 3300005535 Bacteria 300240
53 Ga0070684_100151232 3300005535 Unclassified 2103
54 Ga0070697_100004261 3300005536 Bacteria 10967
55 Ga0070697_100028546 3300005536 Bacteria 4468
56 Ga0070697_100037982 3300005536 Bacteria 3890
57 Ga0068853_100026868 3300005539 Unclassified 4836
58 Ga0070695_100030669 3300005545 Bacteria 3349
59 Ga0070696_100001503 3300005546 Bacteria 15311
60 Ga0070704_100005518 3300005549 Bacteria 7375
61 Ga0068855_100000849 3300005563 Bacteria 37854
62 Ga0068855_100071964 3300005563 Bacteria 4019
63 Ga0068855_100079786 3300005563 Unclassified 3795
64 Ga0068855_100160513 3300005563 Bacteria 2552
65 Ga0068855_100277505 3300005563 Bacteria 1862
66 Ga0070664_100044403 3300005564 Bacteria 3753
67 Ga0068854_100006378 3300005578 Bacteria 7504
68 Ga0068856_100001189 3300005614 Bacteria 27433
69 Ga0068856_100001826 3300005614 Bacteria 22258
70 Ga0068852_100203758 3300005616 Bacteria 1873
71 Ga0068859_100066604 3300005617 Bacteria 3636
72 Ga0068851_10007250 3300005834 Bacteria 5083
73 Ga0068863_100022667 3300005841 Bacteria 5998
74 Ga0068858_100000008 3300005842 Bacteria 238361
75 Ga0068858_100011864 3300005842 Bacteria 8211
76 Ga0068858_100026725 3300005842 Bacteria 5362
77 Ga0068858_100036874 3300005842 Bacteria 4533
78 Ga0081455_10024999 3300005937 Bacteria 5519
79 Ga0097621_100004038 3300006237 Bacteria 10179
80 Ga0068871_100000470 3300006358 Bacteria 27604
81 Ga0075430_100020867 3300006846 Bacteria 5570
82 Ga0075431_100003098 3300006847 Bacteria 16095
83 Ga0075431_100022832 3300006847 Bacteria 6395
84 Ga0075433_10147690 3300006852 Bacteria 2090
85 Ga0075434_100095761 3300006871 Bacteria 2974
86 Ga0097620_100066606 3300006931 Bacteria 3636
87 Ga0075435_100003111 3300007076 Bacteria 11213
88 Ga0075435_100122263 3300007076 Bacteria 2173
89 Ga0099794_10002418 3300007265 Bacteria 6880
90 Ga0105240_10063900 3300009093 Unclassified 4576
91 Ga0111539_10048353 3300009094 Bacteria 5078
92 Ga0105247_10000001 3300009101 Bacteria 739726
93 Ga0114129_10001078 3300009147 Bacteria 35880
94 Ga0114129_10036233 3300009147 Bacteria 6967
95 Ga0105243_10000242 3300009148 Bacteria 62471
96 Ga0105243_10161051 3300009148 Unclassified 1935
97 Ga0105241_10049009 3300009174 Unclassified 3216
98 Ga0105242_10000092 3300009176 Bacteria 62471
99 Ga0105242_10006303 3300009176 Bacteria 9139
100 Ga0105242_10060518 3300009176 Bacteria 3112
101 Ga0105248_10001253 3300009177 Bacteria 28374
102 Ga0105248_10226134 3300009177 Bacteria 2106
103 Ga0105237_10210868 3300009545 Unclassified 1942
104 Ga0105238_10006933 3300009551 Bacteria 11320
105 Ga0105239_10011332 3300010375 Bacteria 9952
106 Ga0157371_10006109 3300013102 Bacteria 10016
107 Ga0157369_10002055 3300013105 Bacteria 24275
108 Ga0157369_10025510 3300013105 Bacteria 6562
109 Ga0157374_10000611 3300013296 Bacteria 31637
110 Ga0157374_10105796 3300013296 Bacteria 2702
111 Ga0157378_10000534 3300013297 Bacteria 36124
112 Ga0163162_10073799 3300013306 Bacteria 3468
113 Ga0157372_10001130 3300013307 Bacteria 28967
114 Ga0157372_10002592 3300013307 Bacteria 19566
115 Ga0157372_10006886 3300013307 Bacteria 12094
116 Ga0157372_10007239 3300013307 Bacteria 11818
117 Ga0157372_10020758 3300013307 Bacteria 7092
118 Ga0157372_10037114 3300013307 Bacteria 5372
119 Ga0157372_10104999 3300013307 Bacteria 3231
120 Ga0157379_10019691 3300014968 Bacteria 5962
121 Ga0213875_10005308 3300021388 Bacteria 6931
122 Ga0207672_1000790 3300025223 Unclassified 3391
123 Ga0209674_100141 3300025226 Bacteria 108978
124 Ga0209674_102399 3300025226 Bacteria 4050
125 Ga0209672_100007 3300025228 Bacteria 959482
126 Ga0209672_100018 3300025228 Bacteria 432924
127 Ga0209672_100161 3300025228 Bacteria 57457
128 Ga0209672_100446 3300025228 Bacteria 23350
129 Ga0209563_100071 3300025230 Bacteria 232653
130 Ga0207427_100036 3300025231 Bacteria 309540
131 Ga0209437_100127 3300025233 Bacteria 190741
132 Ga0209258_100017 3300025242 Bacteria 590785
133 Ga0209258_100024 3300025242 Bacteria 542096
134 Ga0209258_100035 3300025242 Bacteria 430864
135 Ga0209258_100256 3300025242 Bacteria 93548
136 Ga0209646_1001098 3300025246 Bacteria 8038
137 Ga0209026_1000370 3300025250 Bacteria 41493
138 Ga0209026_1002746 3300025250 Bacteria 6297
139 Ga0209677_102040 3300025253 Bacteria 7996
140 Ga0209677_103926 3300025253 Bacteria 4539
141 Ga0209148_1000009 3300025254 Bacteria 1395625
142 Ga0209148_1000045 3300025254 Bacteria 448076
143 Ga0209148_1000048 3300025254 Bacteria 430913
144 Ga0209148_1000084 3300025254 Bacteria 268147
145 Ga0209759_1000616 3300025256 Bacteria 34040
146 Ga0209759_1004008 3300025256 Bacteria 5644
147 Ga0209233_1000101 3300025261 Bacteria 286063
148 Ga0209455_1000010 3300025272 Bacteria 959482
149 Ga0209455_1000029 3300025272 Bacteria 542096
150 Ga0209455_1000035 3300025272 Bacteria 479071
151 Ga0207656_10034729 3300025321 Bacteria 2107
152 Ga0207710_10000003 3300025900 Bacteria 1071597
153 Ga0207699_10046337 3300025906 Unclassified 2543
154 Ga0207705_10000925 3300025909 Bacteria 24001
155 Ga0207705_10002463 3300025909 Bacteria 14269
156 Ga0207705_10014787 3300025909 Bacteria 5611
157 Ga0207684_10005378 3300025910 Bacteria 11828
158 Ga0207707_10046291 3300025912 Unclassified 3788
159 Ga0207693_10074310 3300025915 Bacteria 2662
160 Ga0207657_10000432 3300025919 Bacteria 44554
161 Ga0207657_10008242 3300025919 Bacteria 10607
162 Ga0207652_10022210 3300025921 Bacteria 5245
163 Ga0207646_10023302 3300025922 Bacteria 5688
164 Ga0207646_10092913 3300025922 Bacteria 2701
165 Ga0207694_10017107 3300025924 Bacteria 5477
166 Ga0207700_10011664 3300025928 Bacteria 5617
167 Ga0207664_10002109 3300025929 Bacteria 13084
168 Ga0207664_10033805 3300025929 Unclassified 3933
169 Ga0207644_10018315 3300025931 Bacteria 4735
170 Ga0207690_10023665 3300025932 Bacteria 3836
171 Ga0207686_10000004 3300025934 Bacteria 349251
172 Ga0207686_10000090 3300025934 Bacteria 74224
173 Ga0207709_10000028 3300025935 Bacteria 334429
174 Ga0207669_10048290 3300025937 Bacteria 2528
175 Ga0207661_10000016 3300025944 Bacteria 305159
176 Ga0207661_10040463 3300025944 Bacteria 3664
177 Ga0207667_10000978 3300025949 Bacteria 36480
178 Ga0207667_10076005 3300025949 Bacteria 3486
179 Ga0207667_10082458 3300025949 Bacteria 3331
180 Ga0207667_10085180 3300025949 Bacteria 3272
181 Ga0207640_10017531 3300025981 Unclassified 4192
182 Ga0207640_10043832 3300025981 Bacteria 2862
183 Ga0207677_10019947 3300026023 Unclassified 4059
184 Ga0207703_10000109 3300026035 Bacteria 97743
185 Ga0207703_10006835 3300026035 Bacteria 9083
186 Ga0207703_10013892 3300026035 Bacteria 6277
187 Ga0207703_10020940 3300026035 Bacteria 5116
188 Ga0207639_10017938 3300026041 Bacteria 5021
189 Ga0207678_10000338 3300026067 Bacteria 42189
190 Ga0207708_10066248 3300026075 Unclassified 2761
191 Ga0207702_10002013 3300026078 Bacteria 19691
192 Ga0207702_10003104 3300026078 Bacteria 15406
193 Ga0207641_10008152 3300026088 Bacteria 8671
194 Ga0207676_10032603 3300026095 Bacteria 3928
195 Ga0207698_10029275 3300026142 Bacteria 3942
196 Ga0268264_10091554 3300028381 Bacteria 2623
197 Ga0268264_10153275 3300028381 Bacteria 2068
198 Ga0265330_10003528 3300031235 Bacteria 8149
199 Ga0265332_10000053 3300031238 Bacteria 108878
200 Ga0265328_10002520 3300031239 Bacteria 8210
201 Ga0265320_10005545 3300031240 Bacteria 8088
202 Ga0265339_10053727 3300031249 Bacteria 2190
203 Ga0265331_10000130 3300031250 Bacteria 99140
204 Ga0265316_10000085 3300031344 Bacteria 99136
205 Ga0307408_100031943 3300031548 Unclassified 3669
206 Ga0307408_100047028 3300031548 Bacteria 3088
207 Ga0265314_10000540 3300031711 Bacteria 48694
208 Ga0265314_10005637 3300031711 Bacteria 11242
209 Ga0265342_10002166 3300031712 Bacteria 17300
210 Ga0307405_10014725 3300031731 Unclassified 4215
211 Ga0307405_10035785 3300031731 Bacteria 2969
212 Ga0307413_10000351 3300031824 Bacteria 14645
213 Ga0307410_10003392 3300031852 Bacteria 7986
214 Ga0307410_10014432 3300031852 Unclassified 4648
215 Ga0307406_10002791 3300031901 Bacteria 9533
216 Ga0307406_10016841 3300031901 Bacteria 4253
217 Ga0307406_10036078 3300031901 Bacteria 3044
218 Ga0307412_10077296 3300031911 Bacteria 2289
219 Ga0307409_100000948 3300031995 Bacteria 13507
220 Ga0307409_100004240 3300031995 Bacteria 8003
221 Ga0307416_100017205 3300032002 Bacteria 5050
222 Ga0307414_10034655 3300032004 Bacteria 3350
223 Ga0307414_10095494 3300032004 Bacteria 2222
224 Ga0307414_10098865 3300032004 Bacteria 2190
225 Ga0307411_10030384 3300032005 Bacteria 3311
226 Ga0373934_0003723 3300035086 Bacteria 5614
227 Ga0373923_0045990 3300035111 Bacteria 1814
228 Ga0373955_0058724 3300035172 Bacteria 2117
229 Ga0373933_0028078 3300035724 Bacteria 3244
230 Ga0373933_0070839 3300035724 Bacteria 2121
231 Ga0373937_0049016 3300036401 Bacteria 3867
232 Ga0373937_0064901 3300036401 Bacteria 3359
233 Ga0395899_0000119 3300037312 Bacteria 127184
234 Ga0395899_0021192 3300037312 Bacteria 4930
235 Ga0395900_0000333 3300037418 Bacteria 69342
236 Ga0395898_0000078 3300037466 Bacteria 244514
237 Ga0395898_0000211 3300037466 Bacteria 149301
238 Ga0395905_0005574 3300037471 Bacteria 12825
239 Ga0395905_0021343 3300037471 Bacteria 6126
240 Ga0395905_0113018 3300037471 Bacteria 2551
241 Ga0395905_0215063 3300037471 Bacteria 1800
242 Ga0395901_0057380 3300038443 Bacteria 4049
243 Ga0436365_1903858 3300039437 Bacteria 3294
244 Ga0451577_0000016 3300042876 Bacteria 531002
245 Ga0466969_0002200 3300044656 Bacteria 10417
246 Ga0466966_0007781 3300044684 Bacteria 7097
247 Ga0466966_0017216 3300044684 Bacteria 4778
248 Ga0466961_0001124 3300044693 Bacteria 16407
249 Ga0466961_0002245 3300044693 Bacteria 12024
250 Ga0466961_0026768 3300044693 Bacteria 3708
251 Ga0466961_0047408 3300044693 Bacteria 2747
252 Ga0466971_0006963 3300044719 Bacteria 4918
253 Ga0466971_0036250 3300044719 Bacteria 2212
254 Ga0466970_0003461 3300044765 Bacteria 7687
255 Ga0466959_0000007 3300045049 Bacteria 184664
256 Ga0466959_0032903 3300045049 Bacteria 3837
257 Ga0466959_0071471 3300045049 Bacteria 2513
258 Ga0451576_0110152 3300045051 Bacteria 2866
259 Ga0466958_0012370 3300045836 Bacteria 4833
260 Ga0466958_0018139 3300045836 Bacteria 4079
261 Ga0466958_0049270 3300045836 Bacteria 2548
262 Ga0495653_0030558 3300046463 Bacteria 4289
263 Ga0495580_0002037 3300046472 Bacteria 17779
264 Ga0495580_0038962 3300046472 Unclassified 3401
265 Ga0495582_0005759 3300046473 Bacteria 6900
266 Ga0495639_0018632 3300046475 Bacteria 3025
267 Ga0495662_0028526 3300046476 Unclassified 2694
268 Ga0495594_0003898 3300046499 Bacteria 7676
269 Ga0495594_0005602 3300046499 Bacteria 6455
270 Ga0495594_0066489 3300046499 Bacteria 2000
271 Ga0495618_0056757 3300046514 Bacteria 2479
272 Ga0495620_0001563 3300046515 Bacteria 13599
273 Ga0495630_0006313 3300046517 Bacteria 8419
274 Ga0495630_0138335 3300046517 Bacteria 1851
275 Ga0495652_0029883 3300046529 Bacteria 4782
276 Ga0495652_0078388 3300046529 Bacteria 2735
277 Ga0495665_0010362 3300046531 Bacteria 5046
278 Ga0495665_0066951 3300046531 Unclassified 1895
279 Ga0495640_0025231 3300046533 Bacteria 4315
280 Ga0495640_0049763 3300046533 Unclassified 2888
281 Ga0495586_0004825 3300046535 Bacteria 7208
282 Ga0495645_0006308 3300046543 Bacteria 8224
283 Ga0495645_0107111 3300046543 Bacteria 1981
284 Ga0495667_0017002 3300046559 Bacteria 4910
285 Ga0495634_0011605 3300046642 Bacteria 6409
286 Ga0495657_0027228 3300046675 Bacteria 4037
287 Ga0495646_0068314 3300046680 Bacteria 2098
288 Ga0495658_0006206 3300046683 Bacteria 5870
289 Ga0495613_0043882 3300046689 Bacteria 3309
290 Ga0495604_0029127 3300047317 Bacteria 4393
291 Ga0495604_0132748 3300047317 Bacteria 1788
292 Ga0495636_0009520 3300047318 Bacteria 3827
293 Ga0495674_0015071 3300047319 Bacteria 7235
294 Ga0495676_0077759 3300047321 Unclassified 2529
295 Ga0495680_0101456 3300047322 Bacteria 2143
296 Ga0495675_0018384 3300047444 Bacteria 4435
297 Ga0495675_0064580 3300047444 Bacteria 2315
298 Ga0495684_0023184 3300047471 Bacteria 4772
299 Ga0495684_0045118 3300047471 Bacteria 3373
300 Ga0495684_0061777 3300047471 Bacteria 2850
301 Ga0496105_0037268 3300048908 Unclassified 4004
302 Ga0496109_0020568 3300048912 Bacteria 5829
303 Ga0496110_0000264 3300048913 Bacteria 33975
304 Ga0496110_0062751 3300048913 Bacteria 3282
305 Ga0496110_0062923 3300048913 Bacteria 3278
306 Ga0496112_0130809 3300048915 Bacteria 2481
307 Ga0496113_0007281 3300048916 Bacteria 7101
308 Ga0496115_0033590 3300048918 Bacteria 4051
309 Ga0496124_0000003 3300048927 Bacteria 1300161
310 Ga0501032_0044235 3300049569 Bacteria 3015
311 Ga0501036_0018777 3300049572 Bacteria 5799
312 Ga0501038_0018136 3300049574 Bacteria 6358
313 Ga0501043_0031757 3300049579 Bacteria 4152
314 Ga0501047_0019416 3300049581 Bacteria 6521
315 Ga0501067_0021334 3300049583 Bacteria 3583
316 Ga0501069_0015885 3300049585 Bacteria 4036
317 Ga0501080_0007507 3300049742 Bacteria 9847
318 Ga0501035_0049356 3300049822 Bacteria 3772
319 Ga0501044_0019906 3300049823 Bacteria 7168
320 nmdc:mga05p37_78020_c1 3300050507 Bacteria 4078
321 nmdc:mga0qj67_33962_c1 3300050509 Bacteria 3982
322 nmdc:mga0qj67_4863_c1 3300050509 Bacteria 9768
323 nmdc:mga06r32_19611_c1 3300050510 Bacteria 6210
324 nmdc:mga08y16_27385_c1 3300050511 Bacteria 6006
325 nmdc:mga0rr50_76550_c1 3300050513 Bacteria 2569
326 Ga0495595_0022394 3300053084 Bacteria 2774
327 Ga0495619_0007597 3300053085 Bacteria 6865
328 Ga0466962_0004704 3300061719 Bacteria 6558
329 2855772461 2855767633 Bacteria 7049357
330 Ga0070706_100008935
331 JGI24748J21848_1000020
332 JGI24034J26672_10000002
333 JGI25156J39149_1001956
334 JGI25156J39149_1004866
335 JGI25157J39369_1000682
336 JGI25164J39214_1000113
337 JGI25165J46597_1000158
338 Ga0055539_1001566
339 Ga0055525_1000225
340 Ga0055527_1000066
341 Ga0055527_1000092
342 Ga0055527_1000340
343 Ga0055535_1000058
344 Ga0055535_1000149
345 Ga0055535_1000424
346 Ga0055535_1004112
347 Ga0055542_1000085
348 Ga0055542_1000134
349 Ga0055542_1000250
350 Ga0055542_1000503
351 Ga0055529_1000107
352 Ga0055529_1000173
353 Ga0070658_10006065
354 Ga0070658_10009143
355 Ga0070676_10061613
356 Ga0070683_100000011
357 Ga0070660_100005894
358 Ga0070661_100028980
359 Ga0070669_100031707
360 Ga0070675_100007589
361 Ga0070675_100011353
362 Ga0070674_100052431
363 Ga0070659_100016388
364 Ga0070709_10009292
365 Ga0070714_100001326
366 Ga0070713_100008800
367 Ga0070713_100038406
368 Ga0070694_100000376
369 Ga0070694_100002220
370 Ga0070708_100000059
371 Ga0070708_100025282
372 Ga0070708_100077208
373 Ga0070663_100035567
374 Ga0070681_10055440
375 Ga0070707_100116206
376 Ga0070698_100010741
377 Ga0070699_100005646
378 Ga0070699_100010916
379 Ga0070699_100012224
380 Ga0070679_100025354
381 Ga0070684_100000001
382 Ga0070684_100151232
383 Ga0070697_100004261
384 Ga0070697_100028546
385 Ga0070697_100037982
386 Ga0068853_100026868
387 Ga0070695_100030669
388 Ga0070696_100001503
389 Ga0070704_100005518
390 Ga0068855_100000849
391 Ga0068855_100071964
392 Ga0068855_100079786
393 Ga0068855_100160513
394 Ga0068855_100277505
395 Ga0070664_100044403
396 Ga0068854_100006378
397 Ga0068856_100001189
398 Ga0068856_100001826
399 Ga0068852_100203758
400 Ga0068859_100066604
401 Ga0068851_10007250
402 Ga0068863_100022667
403 Ga0068858_100000008
404 Ga0068858_100011864
405 Ga0068858_100026725
406 Ga0068858_100036874
407 Ga0081455_10024999
408 Ga0097621_100004038
409 Ga0068871_100000470
410 Ga0075430_100020867
411 Ga0075431_100003098
412 Ga0075431_100022832
413 Ga0075433_10147690
414 Ga0075434_100095761
415 Ga0097620_100066606
416 Ga0075435_100003111
417 Ga0075435_100122263
418 Ga0099794_10002418
419 Ga0105240_10063900
420 Ga0111539_10048353
421 Ga0105247_10000001
422 Ga0114129_10001078
423 Ga0114129_10036233
424 Ga0105243_10000242
425 Ga0105243_10161051
426 Ga0105241_10049009
427 Ga0105242_10000092
428 Ga0105242_10006303
429 Ga0105242_10060518
430 Ga0105248_10001253
431 Ga0105248_10226134
432 Ga0105237_10210868
433 Ga0105238_10006933
434 Ga0105239_10011332
435 Ga0157371_10006109
436 Ga0157369_10002055
437 Ga0157369_10025510
438 Ga0157374_10000611
439 Ga0157374_10105796
440 Ga0157378_10000534
441 Ga0163162_10073799
442 Ga0157372_10001130
443 Ga0157372_10002592
444 Ga0157372_10006886
445 Ga0157372_10007239
446 Ga0157372_10020758
447 Ga0157372_10037114
448 Ga0157372_10104999
449 Ga0157379_10019691
450 Ga0213875_10005308
451 Ga0207672_1000790
452 Ga0209674_100141
453 Ga0209674_102399
454 Ga0209672_100007
455 Ga0209672_100018
456 Ga0209672_100161
457 Ga0209672_100446
458 Ga0209563_100071
459 Ga0207427_100036
460 Ga0209437_100127
461 Ga0209258_100017
462 Ga0209258_100024
463 Ga0209258_100035
464 Ga0209258_100256
465 Ga0209646_1001098
466 Ga0209026_1000370
467 Ga0209026_1002746
468 Ga0209677_102040
469 Ga0209677_103926
470 Ga0209148_1000009
471 Ga0209148_1000045
472 Ga0209148_1000048
473 Ga0209148_1000084
474 Ga0209759_1000616
475 Ga0209759_1004008
476 Ga0209233_1000101
477 Ga0209455_1000010
478 Ga0209455_1000029
479 Ga0209455_1000035
480 Ga0207656_10034729
481 Ga0207710_10000003
482 Ga0207699_10046337
483 Ga0207705_10000925
484 Ga0207705_10002463
485 Ga0207705_10014787
486 Ga0207684_10005378
487 Ga0207707_10046291
488 Ga0207693_10074310
489 Ga0207657_10000432
490 Ga0207657_10008242
491 Ga0207652_10022210
492 Ga0207646_10023302
493 Ga0207646_10092913
494 Ga0207694_10017107
495 Ga0207700_10011664
496 Ga0207664_10002109
497 Ga0207664_10033805
498 Ga0207644_10018315
499 Ga0207690_10023665
500 Ga0207686_10000004
501 Ga0207686_10000090
502 Ga0207709_10000028
503 Ga0207669_10048290
504 Ga0207661_10000016
505 Ga0207661_10040463
506 Ga0207667_10000978
507 Ga0207667_10076005
508 Ga0207667_10082458
509 Ga0207667_10085180
510 Ga0207640_10017531
511 Ga0207640_10043832
512 Ga0207677_10019947
513 Ga0207703_10000109
514 Ga0207703_10006835
515 Ga0207703_10013892
516 Ga0207703_10020940
517 Ga0207639_10017938
518 Ga0207678_10000338
519 Ga0207708_10066248
520 Ga0207702_10002013
521 Ga0207702_10003104
522 Ga0207641_10008152
523 Ga0207676_10032603
524 Ga0207698_10029275
525 Ga0268264_10091554
526 Ga0268264_10153275
527 Ga0265330_10003528
528 Ga0265332_10000053
529 Ga0265328_10002520
530 Ga0265320_10005545
531 Ga0265339_10053727
532 Ga0265331_10000130
533 Ga0265316_10000085
534 Ga0307408_100031943
535 Ga0307408_100047028
536 Ga0265314_10000540
537 Ga0265314_10005637
538 Ga0265342_10002166
539 Ga0307405_10014725
540 Ga0307405_10035785
541 Ga0307413_10000351
542 Ga0307410_10003392
543 Ga0307410_10014432
544 Ga0307406_10002791
545 Ga0307406_10016841
546 Ga0307406_10036078
547 Ga0307412_10077296
548 Ga0307409_100000948
549 Ga0307409_100004240
550 Ga0307416_100017205
551 Ga0307414_10034655
552 Ga0307414_10095494
553 Ga0307414_10098865
554 Ga0307411_10030384
555 Ga0373934_0003723
556 Ga0373923_0045990
557 Ga0373955_0058724
558 Ga0373933_0028078
559 Ga0373933_0070839
560 Ga0373937_0049016
561 Ga0373937_0064901
562 Ga0395899_0000119
563 Ga0395899_0021192
564 Ga0395900_0000333
565 Ga0395898_0000078
566 Ga0395898_0000211
567 Ga0395905_0005574
568 Ga0395905_0021343
569 Ga0395905_0113018
570 Ga0395905_0215063
571 Ga0395901_0057380
572 Ga0436365_1903858
573 Ga0451577_0000016
574 Ga0466969_0002200
575 Ga0466966_0007781
576 Ga0466966_0017216
577 Ga0466961_0001124
578 Ga0466961_0002245
579 Ga0466961_0026768
580 Ga0466961_0047408
581 Ga0466971_0006963
582 Ga0466971_0036250
583 Ga0466970_0003461
584 Ga0466959_0000007
585 Ga0466959_0032903
586 Ga0466959_0071471
587 Ga0451576_0110152
588 Ga0466958_0012370
589 Ga0466958_0018139
590 Ga0466958_0049270
591 Ga0495653_0030558
592 Ga0495580_0002037
593 Ga0495580_0038962
594 Ga0495582_0005759
595 Ga0495639_0018632
596 Ga0495662_0028526
597 Ga0495594_0003898
598 Ga0495594_0005602
599 Ga0495594_0066489
600 Ga0495618_0056757
601 Ga0495620_0001563
602 Ga0495630_0006313
603 Ga0495630_0138335
604 Ga0495652_0029883
605 Ga0495652_0078388
606 Ga0495665_0010362
607 Ga0495665_0066951
608 Ga0495640_0025231
609 Ga0495640_0049763
610 Ga0495586_0004825
611 Ga0495645_0006308
612 Ga0495645_0107111
613 Ga0495667_0017002
614 Ga0495634_0011605
615 Ga0495657_0027228
616 Ga0495646_0068314
617 Ga0495658_0006206
618 Ga0495613_0043882
619 Ga0495604_0029127
620 Ga0495604_0132748
621 Ga0495636_0009520
622 Ga0495674_0015071
623 Ga0495676_0077759
624 Ga0495680_0101456
625 Ga0495675_0018384
626 Ga0495675_0064580
627 Ga0495684_0023184
628 Ga0495684_0045118
629 Ga0495684_0061777
630 Ga0496105_0037268
631 Ga0496109_0020568
632 Ga0496110_0000264
633 Ga0496110_0062751
634 Ga0496110_0062923
635 Ga0496112_0130809
636 Ga0496113_0007281
637 Ga0496115_0033590
638 Ga0496124_0000003
639 Ga0501032_0044235
640 Ga0501036_0018777
641 Ga0501038_0018136
642 Ga0501043_0031757
643 Ga0501047_0019416
644 Ga0501067_0021334
645 Ga0501069_0015885
646 Ga0501080_0007507
647 Ga0501035_0049356
648 Ga0501044_0019906
649 nmdc:mga05p37_78020_c1
650 nmdc:mga0qj67_33962_c1
651 nmdc:mga0qj67_4863_c1
652 nmdc:mga06r32_19611_c1
653 nmdc:mga08y16_27385_c1
654 nmdc:mga0rr50_76550_c1
655 Ga0495595_0022394
656 Ga0495619_0007597
657 Ga0466962_0004704
658 2855772461

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03023

MurJ

Lipid II flippase MurJ

105

567

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7waw-assembly1.cif.gz_A murj inward closed form 0.9094 68 561
6cc4-assembly1.cif.gz_A structure of murj from escherichia coli 0.9038 75 571
7waw-assembly1.cif.gz_A murj inward closed form 0.8972 68 561
6nc6-assembly2.cif.gz_B lipid ii flippase murj, inward closed conformation 0.8888 66 561
7wag-assembly1.cif.gz_A crystal structure of murj squeezed form 0.8759 63 563
ID Description Score Start End Superfamily
af_Q2G140_246_407_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.793 293 452 1.10.1760.20
af_Q2G140_246_407_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.7461 293 452 1.10.1760.20
af_Q9JHZ2_346_492_1.10.1760.20 Mainly Alpha;Orthogonal Bundle;Arp2/3 complex 21 kDa subunit ARPC3; 0.7164 168 268 1.10.1760.20
af_P37746_280_415_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.6535 355 503 1.20.1070.10
af_P0AAA7_285_416_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.6448 360 498 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A1Q7H662-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.9513 55 343 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-A0A7W1NMV6-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.9503 62 348 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-A0A4Q3JFM7-F1-model_v4 deleted 0.9464 60 263
AF-A0A7V0IFB1-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.944 63 313 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204
AF-A0A7C1MA24-F1-model_v4 Murein biosynthesis integral membrane protein MurJ 0.9436 63 351 GO:0005886
GO:0008360
GO:0009252
GO:0015648
GO:0034204

Map