F409566

General Info

Members Datasets Scaffolds Average Seq Length
329 186 658 197

Family's Representative Sequence

Representative Sequence 3300005456|Ga0070678_100492022|Ga0070678_1004920221
Length 236
Sequence MYSKCVFRNDTKGLFRNRQAPHRTVVSPRPRKVSNDDVFAAAYRVMQRVGPADLTLEAIAREAGVTAGALVQRFGSKRQLLVALAEGVAEAPSFVDQLRQQHRSPLAALRAYADCMAGLAETPAAYLRNLAYLLEDLKDRDLRTQLAKQATSTRRQLASLIAEAVKVGELSHRVKPKALARTVEAVVGGSMMAWAFYREGAAGRWIRTDLDAVLAPYIATKKRNPTSETARANHAK

Samples

Sample ID Description Type Environment
1 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
52 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
83 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
84 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
124 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
126 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
127 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
128 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
131 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
132 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
133 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
134 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
137 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
138 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
139 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
140 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
141 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
142 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
143 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
144 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
145 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
146 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
147 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
148 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
149 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
150 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
151 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
152 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
153 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
154 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
155 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
156 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
159 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
164 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
165 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
166 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
167 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
173 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
174 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
175 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.65
Nodule 0
Rhizoplane 2.74
Rhizosphere 91.79
Stem 0
Stem Tuber 0
Unclassified 27.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070678_100492022 3300005456 Bacteria 1081
2 MBSR1b_contig_4531457 2162886012 Bacteria 1416
3 Ga0065707_10236417 3300005295 Unclassified 1171
4 Ga0070670_100057807 3300005331 Bacteria 3329
5 Ga0070670_100110936 3300005331 Unclassified 2364
6 Ga0070670_100145666 3300005331 Unclassified 2049
7 Ga0070677_10151134 3300005333 Bacteria 1081
8 Ga0070677_10155847 3300005333 Bacteria 1067
9 Ga0068869_100091045 3300005334 Bacteria 2294
10 Ga0070666_10091219 3300005335 Unclassified 2093
11 Ga0070682_100112354 3300005337 Bacteria 1818
12 Ga0070682_100543181 3300005337 Bacteria 908
13 Ga0070689_100505826 3300005340 Bacteria 1036
14 Ga0070691_10389446 3300005341 Bacteria 783
15 Ga0070661_100643696 3300005344 Bacteria 860
16 Ga0070669_100041125 3300005353 Bacteria 3361
17 Ga0070669_100161943 3300005353 Bacteria 1739
18 Ga0070675_100272303 3300005354 Bacteria 1486
19 Ga0070675_100388698 3300005354 Bacteria 1243
20 Ga0070675_100470243 3300005354 Bacteria 1129
21 Ga0070675_100614595 3300005354 Unclassified 986
22 Ga0070671_100100201 3300005355 Bacteria 2430
23 Ga0070671_100414596 3300005355 Unclassified 1153
24 Ga0070674_100067314 3300005356 Bacteria 2519
25 Ga0070674_100069905 3300005356 Bacteria 2478
26 Ga0070673_100029317 3300005364 Unclassified 4102
27 Ga0070673_100043121 3300005364 Bacteria 3483
28 Ga0070673_100162248 3300005364 Unclassified 1901
29 Ga0070688_100023103 3300005365 Bacteria 3653
30 Ga0070688_100202709 3300005365 Bacteria 1389
31 Ga0070701_10021105 3300005438 Plasmid 3103
32 Ga0070701_10293107 3300005438 Bacteria 998
33 Ga0070705_100172190 3300005440 Unclassified 1458
34 Ga0070705_100322209 3300005440 Bacteria 1116
35 Ga0070705_100484133 3300005440 Bacteria 936
36 Ga0070700_100008310 3300005441 Bacteria 5649
37 Ga0070694_100275507 3300005444 Bacteria 1281
38 Ga0070678_100470752 3300005456 Bacteria 1104
39 Ga0070662_100798481 3300005457 Bacteria 802
40 Ga0068867_100160999 3300005459 Unclassified 1770
41 Ga0068867_100248194 3300005459 Bacteria 1446
42 Ga0070685_10031145 3300005466 Unclassified 2978
43 Ga0070685_10224533 3300005466 Bacteria 1232
44 Ga0070698_100000573 3300005471 Bacteria 39404
45 Ga0070697_100770094 3300005536 Unclassified 851
46 Ga0070672_100074071 3300005543 Bacteria 2715
47 Ga0070672_100192100 3300005543 Unclassified 1705
48 Ga0070686_100025477 3300005544 Unclassified 3560
49 Ga0070686_100178287 3300005544 Bacteria 1508
50 Ga0070695_100028679 3300005545 Unclassified 3455
51 Ga0070695_100516913 3300005545 Bacteria 926
52 Ga0070696_100284264 3300005546 Bacteria 1262
53 Ga0070693_100004872 3300005547 Bacteria 6408
54 Ga0070665_101226803 3300005548 Unclassified 760
55 Ga0070704_100819376 3300005549 Bacteria 833
56 Ga0068855_100418625 3300005563 Bacteria 1466
57 Ga0070664_100230524 3300005564 Bacteria 1660
58 Ga0068857_100421846 3300005577 Bacteria 1244
59 Ga0068857_100641865 3300005577 Unclassified 1006
60 Ga0068854_100023716 3300005578 Bacteria 4193
61 Ga0068854_100768725 3300005578 Unclassified 837
62 Ga0068856_100425895 3300005614 Bacteria 1347
63 Ga0070702_100111496 3300005615 Bacteria 1697
64 Ga0068852_100414397 3300005616 Bacteria 1328
65 Ga0068859_100127851 3300005617 Bacteria 2611
66 Ga0068859_100580479 3300005617 Bacteria 1215
67 Ga0068859_101488599 3300005617 Unclassified 747
68 Ga0068864_101286967 3300005618 Unclassified 731
69 Ga0068866_10267603 3300005718 Bacteria 1053
70 Ga0068851_10206768 3300005834 Bacteria 1098
71 Ga0068870_10106286 3300005840 Unclassified 1595
72 Ga0068870_10244668 3300005840 Unclassified 1109
73 Ga0068863_100038086 3300005841 Bacteria 4575
74 Ga0068863_100591122 3300005841 Bacteria 1098
75 Ga0068858_100434341 3300005842 Unclassified 1264
76 Ga0068858_100437259 3300005842 Bacteria 1260
77 Ga0068858_101087510 3300005842 Bacteria 785
78 Ga0068860_100127788 3300005843 Bacteria 2437
79 Ga0068862_100516591 3300005844 Unclassified 1136
80 Ga0070717_10463399 3300006028 Bacteria 1143
81 Ga0075368_10027096 3300006042 Bacteria 2208
82 Ga0075368_10029369 3300006042 Bacteria 2126
83 Ga0075364_10094853 3300006051 Bacteria 1983
84 Ga0075367_10100600 3300006178 Unclassified 1767
85 Ga0075367_10228602 3300006178 Bacteria 1165
86 Ga0075366_10134393 3300006195 Unclassified 1493
87 Ga0075428_100007215 3300006844 Bacteria 12310
88 Ga0075428_100018373 3300006844 Bacteria 7731
89 Ga0075428_100065592 3300006844 Unclassified 3976
90 Ga0075430_100832754 3300006846 Bacteria 760
91 Ga0075431_100006399 3300006847 Bacteria 11689
92 Ga0075431_100442019 3300006847 Bacteria 1297
93 Ga0075429_100148420 3300006880 Bacteria 2053
94 Ga0075429_100692620 3300006880 Unclassified 893
95 Ga0068865_100191249 3300006881 Unclassified 1583
96 Ga0068865_100875239 3300006881 Bacteria 780
97 Ga0075436_100804690 3300006914 Bacteria 700
98 Ga0097620_100127846 3300006931 Bacteria 2611
99 Ga0097620_100580526 3300006931 Bacteria 1215
100 Ga0097620_101489060 3300006931 Unclassified 747
101 Ga0075435_100047173 3300007076 Bacteria 3458
102 Ga0075435_100270486 3300007076 Unclassified 1449
103 Ga0105240_10514937 3300009093 Bacteria 1328
104 Ga0111539_10043321 3300009094 Bacteria 5396
105 Ga0111539_10043655 3300009094 Bacteria 5373
106 Ga0111539_10046592 3300009094 Bacteria 5185
107 Ga0111539_10112657 3300009094 Bacteria 3191
108 Ga0111539_10219524 3300009094 Bacteria 2214
109 Ga0111539_10430101 3300009094 Unclassified 1537
110 Ga0111539_10676202 3300009094 Bacteria 1202
111 Ga0111539_10823398 3300009094 Bacteria 1080
112 Ga0105245_10023585 3300009098 Bacteria 5401
113 Ga0105245_10335401 3300009098 Bacteria 1494
114 Ga0105245_11381073 3300009098 Bacteria 754
115 Ga0114129_10039418 3300009147 Bacteria 6660
116 Ga0114129_10305861 3300009147 Bacteria 2118
117 Ga0114129_10332237 3300009147 Bacteria 2018
118 Ga0114129_10353647 3300009147 Bacteria 1945
119 Ga0114129_10422688 3300009147 Unclassified 1752
120 Ga0105243_10002690 3300009148 Bacteria 14770
121 Ga0105243_10139673 3300009148 Unclassified 2065
122 Ga0105241_10080829 3300009174 Bacteria 2545
123 Ga0105242_10135564 3300009176 Bacteria 2130
124 Ga0105242_10389843 3300009176 Bacteria 1297
125 Ga0105248_10031779 3300009177 Bacteria 5898
126 Ga0105248_10043541 3300009177 Bacteria 5033
127 Ga0105248_10077221 3300009177 Unclassified 3744
128 Ga0105249_10630224 3300009553 Bacteria 1129
129 Ga0105246_10058455 3300011119 Unclassified 2671
130 Ga0105246_10396883 3300011119 Bacteria 1144
131 Ga0157369_10256505 3300013105 Bacteria 1824
132 Ga0157374_10784308 3300013296 Bacteria 968
133 Ga0157378_10134396 3300013297 Bacteria 2292
134 Ga0157378_10228441 3300013297 Bacteria 1772
135 Ga0157378_10996835 3300013297 Unclassified 872
136 Ga0157372_10004804 3300013307 Bacteria 14359
137 Ga0157372_11049688 3300013307 Unclassified 943
138 Ga0157372_11504075 3300013307 Unclassified 775
139 Ga0157375_10011365 3300013308 Bacteria 7860
140 Ga0157375_10163844 3300013308 Unclassified 2367
141 Ga0163163_10156436 3300014325 Bacteria 2324
142 Ga0163163_10251309 3300014325 Bacteria 1818
143 Ga0163163_10318958 3300014325 Bacteria 1608
144 Ga0163163_10343362 3300014325 Unclassified 1548
145 Ga0163163_10793725 3300014325 Bacteria 1010
146 Ga0163163_11067192 3300014325 Bacteria 871
147 Ga0157380_10002006 3300014326 Bacteria 13568
148 Ga0157380_10005710 3300014326 Bacteria 8709
149 Ga0157380_10013918 3300014326 Bacteria 5875
150 Ga0157380_10486350 3300014326 Unclassified 1195
151 Ga0157380_10512021 3300014326 Bacteria 1168
152 Ga0157380_10578206 3300014326 Bacteria 1107
153 Ga0157380_10680149 3300014326 Unclassified 1031
154 Ga0157380_10718251 3300014326 Unclassified 1006
155 Ga0157380_11252973 3300014326 Bacteria 787
156 Ga0157377_10494738 3300014745 Bacteria 853
157 Ga0157379_11114689 3300014968 Bacteria 756
158 Ga0163161_10437743 3300017792 Unclassified 1055
159 Ga0213876_10007453 3300021384 Bacteria 5952
160 Ga0213876_10023401 3300021384 Bacteria 3264
161 Ga0213876_10197864 3300021384 Bacteria 1068
162 Ga0207682_10206219 3300025893 Bacteria 905
163 Ga0207642_10325900 3300025899 Bacteria 898
164 Ga0207688_10381470 3300025901 Bacteria 872
165 Ga0207680_10159832 3300025903 Bacteria 1510
166 Ga0207680_10423236 3300025903 Bacteria 943
167 Ga0207645_10014544 3300025907 Bacteria 5264
168 Ga0207643_10043062 3300025908 Unclassified 2546
169 Ga0207643_10250074 3300025908 Bacteria 1092
170 Ga0207643_10255888 3300025908 Unclassified 1080
171 Ga0207684_10093307 3300025910 Bacteria 2566
172 Ga0207660_10059613 3300025917 Unclassified 2741
173 Ga0207660_10311607 3300025917 Bacteria 1255
174 Ga0207662_10434439 3300025918 Unclassified 895
175 Ga0207649_10560825 3300025920 Bacteria 875
176 Ga0207681_10126518 3300025923 Unclassified 1883
177 Ga0207681_10137230 3300025923 Bacteria 1817
178 Ga0207650_10084894 3300025925 Bacteria 2407
179 Ga0207650_10149549 3300025925 Bacteria 1842
180 Ga0207650_10379436 3300025925 Unclassified 1167
181 Ga0207659_10335200 3300025926 Bacteria 1252
182 Ga0207687_10160862 3300025927 Bacteria 1723
183 Ga0207644_10574742 3300025931 Unclassified 934
184 Ga0207644_10879933 3300025931 Bacteria 750
185 Ga0207706_10503442 3300025933 Bacteria 1045
186 Ga0207706_10538680 3300025933 Unclassified 1006
187 Ga0207686_10128209 3300025934 Bacteria 1737
188 Ga0207686_10150812 3300025934 Bacteria 1618
189 Ga0207686_10372894 3300025934 Bacteria 1080
190 Ga0207709_10165243 3300025935 Bacteria 1548
191 Ga0207670_10087006 3300025936 Unclassified 2200
192 Ga0207670_10166927 3300025936 Unclassified 1647
193 Ga0207670_10266169 3300025936 Unclassified 1331
194 Ga0207670_10288526 3300025936 Bacteria 1281
195 Ga0207669_10217544 3300025937 Bacteria 1399
196 Ga0207669_10248599 3300025937 Bacteria 1323
197 Ga0207704_10316164 3300025938 Bacteria 1202
198 Ga0207691_10091064 3300025940 Bacteria 2733
199 Ga0207691_10111936 3300025940 Unclassified 2427
200 Ga0207691_11086922 3300025940 Unclassified 666
201 Ga0207711_10340915 3300025941 Unclassified 1387
202 Ga0207711_10889237 3300025941 Bacteria 828
203 Ga0207689_10087593 3300025942 Unclassified 2558
204 Ga0207689_10669167 3300025942 Bacteria 875
205 Ga0207679_10051159 3300025945 Unclassified 3023
206 Ga0207679_10119797 3300025945 Bacteria 2093
207 Ga0207667_10702587 3300025949 Bacteria 1013
208 Ga0207651_10141448 3300025960 Unclassified 1859
209 Ga0207651_11075021 3300025960 Bacteria 720
210 Ga0207712_10258703 3300025961 Unclassified 1410
211 Ga0207712_10303079 3300025961 Bacteria 1312
212 Ga0207668_10202553 3300025972 Bacteria 1582
213 Ga0207640_10017352 3300025981 Bacteria 4211
214 Ga0207640_10357450 3300025981 Bacteria 1176
215 Ga0207658_10147171 3300025986 Bacteria 1915
216 Ga0207658_10178692 3300025986 Bacteria 1755
217 Ga0207658_10558637 3300025986 Bacteria 1025
218 Ga0207708_10007018 3300026075 Bacteria 8324
219 Ga0207708_10033310 3300026075 Unclassified 3914
220 Ga0207708_10071708 3300026075 Bacteria 2654
221 Ga0207708_10434218 3300026075 Bacteria 1091
222 Ga0207702_10097794 3300026078 Bacteria 2584
223 Ga0207641_10369101 3300026088 Bacteria 1372
224 Ga0207648_10006305 3300026089 Bacteria 11796
225 Ga0207648_10016672 3300026089 Bacteria 6704
226 Ga0207648_10257683 3300026089 Bacteria 1556
227 Ga0207648_10387622 3300026089 Unclassified 1264
228 Ga0207648_10590120 3300026089 Bacteria 1023
229 Ga0207676_11462205 3300026095 Unclassified 680
230 Ga0207674_10165000 3300026116 Bacteria 2169
231 Ga0207674_10550407 3300026116 Bacteria 1115
232 Ga0207675_100141960 3300026118 Bacteria 2282
233 Ga0207675_100656935 3300026118 Bacteria 1055
234 Ga0207683_10165213 3300026121 Bacteria 2003
235 Ga0207683_10359897 3300026121 Bacteria 1336
236 Ga0207683_10528662 3300026121 Unclassified 1090
237 Ga0209982_1009403 3300027552 Bacteria 1443
238 Ga0209971_1004060 3300027682 Bacteria 3466
239 Ga0209813_10031723 3300027866 Bacteria 1561
240 Ga0209813_10123556 3300027866 Bacteria 903
241 Ga0209974_10018980 3300027876 Bacteria 2280
242 Ga0207428_10030487 3300027907 Unclassified 4458
243 Ga0207428_10088833 3300027907 Bacteria 2403
244 Ga0207428_10275966 3300027907 Unclassified 1249
245 Ga0268265_10138984 3300028380 Unclassified 2031
246 Ga0268265_10270410 3300028380 Unclassified 1516
247 Ga0268264_10453515 3300028381 Bacteria 1243
248 Ga0268264_10755270 3300028381 Unclassified 969
249 Ga0307408_100055312 3300031548 Plasmid 2873
250 Ga0307408_100452158 3300031548 Bacteria 1114
251 Ga0307413_10044224 3300031824 Unclassified 2631
252 Ga0307413_10522387 3300031824 Bacteria 957
253 Ga0307410_10046360 3300031852 Bacteria 2899
254 Ga0307406_10018870 3300031901 Bacteria 4038
255 Ga0307407_10147202 3300031903 Bacteria 1526
256 Ga0307412_10341746 3300031911 Bacteria 1198
257 Ga0307409_100159118 3300031995 Bacteria 1972
258 Ga0307409_100322354 3300031995 Bacteria 1447
259 Ga0307409_100455966 3300031995 Unclassified 1235
260 Ga0307409_100735501 3300031995 Bacteria 989
261 Ga0307414_10036223 3300032004 Bacteria 3292
262 Ga0307411_10008414 3300032005 Bacteria 5343
263 Ga0307411_10028046 3300032005 Unclassified 3417
264 Ga0373951_0067305 3300035091 Bacteria 907
265 Ga0373952_0195943 3300035092 Bacteria 590
266 Ga0373941_0015294 3300035115 Bacteria 2066
267 Ga0373955_0359187 3300035172 Unclassified 883
268 Ga0373931_0265501 3300035691 Bacteria 1049
269 Ga0373927_0474948 3300035695 Unclassified 826
270 Ga0436365_0382270 3300039437 Bacteria 1604
271 Ga0436365_0785730 3300039437 Bacteria 13267
272 Ga0436365_1367033 3300039437 Bacteria 7772
273 Ga0439443_054613 3300042003 Bacteria 705
274 Ga0439457_073537 3300042014 Bacteria 781
275 Ga0450923_003386 3300042125 Bacteria 2402
276 Ga0439435_0069499 3300042436 Bacteria 1041
277 Ga0439444_0014323 3300042437 Unclassified 1325
278 Ga0439444_0031566 3300042437 Bacteria 997
279 Ga0439464_0118174 3300042439 Unclassified 815
280 Ga0439440_0097936 3300042993 Unclassified 795
281 Ga0495603_0205197 3300046455 Unclassified 1139
282 Ga0495582_0024573 3300046473 Bacteria 3298
283 Ga0495642_0200090 3300046528 Unclassified 871
284 Ga0495621_0039454 3300046539 Bacteria 1651
285 Ga0495658_0026142 3300046683 Bacteria 3125
286 Ga0495589_0392625 3300046794 Unclassified 637
287 Ga0495581_0091209 3300047315 Bacteria 1768
288 Ga0495675_0530328 3300047444 Bacteria 673
289 Ga0496104_0192175 3300048907 Unclassified 1953
290 Ga0496106_0730874 3300048909 Bacteria 788
291 Ga0496107_0152156 3300048910 Bacteria 1712
292 Ga0496109_0094399 3300048912 Unclassified 2769
293 Ga0496109_0405994 3300048912 Bacteria 1287
294 Ga0496111_0145945 3300048914 Bacteria 1754
295 Ga0496112_0005026 3300048915 Bacteria 11357
296 Ga0496112_0201079 3300048915 Bacteria 1952
297 Ga0496113_0013483 3300048916 Bacteria 5541
298 Ga0501034_0071317 3300049571 Bacteria 3484
299 Ga0501039_0978299 3300049575 Bacteria 658
300 Ga0501067_0083186 3300049583 Bacteria 1775
301 Ga0501072_0120869 3300049588 Bacteria 2087
302 Ga0501074_0262899 3300049590 Bacteria 1227
303 Ga0501076_0340525 3300049592 Bacteria 1231
304 Ga0501081_0202613 3300049743 Bacteria 1439
305 nmdc:mga04h51_162613_c1 3300050495 Bacteria 860
306 nmdc:mga04h51_22879_c1 3300050495 Bacteria 1896
307 nmdc:mga05p37_1120448_c1 3300050507 Unclassified 822
308 nmdc:mga05p37_1200610_c1 3300050507 Bacteria 784
309 nmdc:mga05p37_167373_c1 3300050507 Bacteria 2682
310 nmdc:mga09592_296035_c1 3300050508 Bacteria 1403
311 nmdc:mga09592_789677_c1 3300050508 Bacteria 804
312 nmdc:mga06r32_142903_c1 3300050510 Bacteria 2370
313 nmdc:mga06r32_197092_c1 3300050510 Bacteria 2001
314 nmdc:mga08y16_126293_c1 3300050511 Bacteria 2661
315 nmdc:mga08y16_22143_c1 3300050511 Bacteria 6709
316 nmdc:mga08y16_3142_c1 3300050511 Bacteria 17097
317 nmdc:mga08y16_397396_c1 3300050511 Bacteria 1411
318 nmdc:mga08y16_506588_c1 3300050511 Bacteria 1226
319 nmdc:mga08y16_648736_c1 3300050511 Unclassified 1060
320 nmdc:mga08y16_794361_c1 3300050511 Unclassified 940
321 nmdc:mga0n895_289643_c1 3300050512 Bacteria 1660
322 nmdc:mga0n895_482449_c1 3300050512 Bacteria 1250
323 nmdc:mga0rr50_125660_c1 3300050513 Bacteria 2048
324 nmdc:mga0rr50_443344_c1 3300050513 Unclassified 1100
325 nmdc:mga08x19_626025_c1 3300050514 Bacteria 763
326 Ga0495619_0283461 3300053085 Bacteria 1148
327 Ga0500555_000613 3300053103 Bacteria 13800
328 Ga0500645_001053 3300053730 Bacteria 15332
329 Ga0530510_0045340 3300061734 Bacteria 3176
330 Ga0070678_100492022
331 MBSR1b_contig_4531457
332 Ga0065707_10236417
333 Ga0070670_100057807
334 Ga0070670_100110936
335 Ga0070670_100145666
336 Ga0070677_10151134
337 Ga0070677_10155847
338 Ga0068869_100091045
339 Ga0070666_10091219
340 Ga0070682_100112354
341 Ga0070682_100543181
342 Ga0070689_100505826
343 Ga0070691_10389446
344 Ga0070661_100643696
345 Ga0070669_100041125
346 Ga0070669_100161943
347 Ga0070675_100272303
348 Ga0070675_100388698
349 Ga0070675_100470243
350 Ga0070675_100614595
351 Ga0070671_100100201
352 Ga0070671_100414596
353 Ga0070674_100067314
354 Ga0070674_100069905
355 Ga0070673_100029317
356 Ga0070673_100043121
357 Ga0070673_100162248
358 Ga0070688_100023103
359 Ga0070688_100202709
360 Ga0070701_10021105
361 Ga0070701_10293107
362 Ga0070705_100172190
363 Ga0070705_100322209
364 Ga0070705_100484133
365 Ga0070700_100008310
366 Ga0070694_100275507
367 Ga0070678_100470752
368 Ga0070662_100798481
369 Ga0068867_100160999
370 Ga0068867_100248194
371 Ga0070685_10031145
372 Ga0070685_10224533
373 Ga0070698_100000573
374 Ga0070697_100770094
375 Ga0070672_100074071
376 Ga0070672_100192100
377 Ga0070686_100025477
378 Ga0070686_100178287
379 Ga0070695_100028679
380 Ga0070695_100516913
381 Ga0070696_100284264
382 Ga0070693_100004872
383 Ga0070665_101226803
384 Ga0070704_100819376
385 Ga0068855_100418625
386 Ga0070664_100230524
387 Ga0068857_100421846
388 Ga0068857_100641865
389 Ga0068854_100023716
390 Ga0068854_100768725
391 Ga0068856_100425895
392 Ga0070702_100111496
393 Ga0068852_100414397
394 Ga0068859_100127851
395 Ga0068859_100580479
396 Ga0068859_101488599
397 Ga0068864_101286967
398 Ga0068866_10267603
399 Ga0068851_10206768
400 Ga0068870_10106286
401 Ga0068870_10244668
402 Ga0068863_100038086
403 Ga0068863_100591122
404 Ga0068858_100434341
405 Ga0068858_100437259
406 Ga0068858_101087510
407 Ga0068860_100127788
408 Ga0068862_100516591
409 Ga0070717_10463399
410 Ga0075368_10027096
411 Ga0075368_10029369
412 Ga0075364_10094853
413 Ga0075367_10100600
414 Ga0075367_10228602
415 Ga0075366_10134393
416 Ga0075428_100007215
417 Ga0075428_100018373
418 Ga0075428_100065592
419 Ga0075430_100832754
420 Ga0075431_100006399
421 Ga0075431_100442019
422 Ga0075429_100148420
423 Ga0075429_100692620
424 Ga0068865_100191249
425 Ga0068865_100875239
426 Ga0075436_100804690
427 Ga0097620_100127846
428 Ga0097620_100580526
429 Ga0097620_101489060
430 Ga0075435_100047173
431 Ga0075435_100270486
432 Ga0105240_10514937
433 Ga0111539_10043321
434 Ga0111539_10043655
435 Ga0111539_10046592
436 Ga0111539_10112657
437 Ga0111539_10219524
438 Ga0111539_10430101
439 Ga0111539_10676202
440 Ga0111539_10823398
441 Ga0105245_10023585
442 Ga0105245_10335401
443 Ga0105245_11381073
444 Ga0114129_10039418
445 Ga0114129_10305861
446 Ga0114129_10332237
447 Ga0114129_10353647
448 Ga0114129_10422688
449 Ga0105243_10002690
450 Ga0105243_10139673
451 Ga0105241_10080829
452 Ga0105242_10135564
453 Ga0105242_10389843
454 Ga0105248_10031779
455 Ga0105248_10043541
456 Ga0105248_10077221
457 Ga0105249_10630224
458 Ga0105246_10058455
459 Ga0105246_10396883
460 Ga0157369_10256505
461 Ga0157374_10784308
462 Ga0157378_10134396
463 Ga0157378_10228441
464 Ga0157378_10996835
465 Ga0157372_10004804
466 Ga0157372_11049688
467 Ga0157372_11504075
468 Ga0157375_10011365
469 Ga0157375_10163844
470 Ga0163163_10156436
471 Ga0163163_10251309
472 Ga0163163_10318958
473 Ga0163163_10343362
474 Ga0163163_10793725
475 Ga0163163_11067192
476 Ga0157380_10002006
477 Ga0157380_10005710
478 Ga0157380_10013918
479 Ga0157380_10486350
480 Ga0157380_10512021
481 Ga0157380_10578206
482 Ga0157380_10680149
483 Ga0157380_10718251
484 Ga0157380_11252973
485 Ga0157377_10494738
486 Ga0157379_11114689
487 Ga0163161_10437743
488 Ga0213876_10007453
489 Ga0213876_10023401
490 Ga0213876_10197864
491 Ga0207682_10206219
492 Ga0207642_10325900
493 Ga0207688_10381470
494 Ga0207680_10159832
495 Ga0207680_10423236
496 Ga0207645_10014544
497 Ga0207643_10043062
498 Ga0207643_10250074
499 Ga0207643_10255888
500 Ga0207684_10093307
501 Ga0207660_10059613
502 Ga0207660_10311607
503 Ga0207662_10434439
504 Ga0207649_10560825
505 Ga0207681_10126518
506 Ga0207681_10137230
507 Ga0207650_10084894
508 Ga0207650_10149549
509 Ga0207650_10379436
510 Ga0207659_10335200
511 Ga0207687_10160862
512 Ga0207644_10574742
513 Ga0207644_10879933
514 Ga0207706_10503442
515 Ga0207706_10538680
516 Ga0207686_10128209
517 Ga0207686_10150812
518 Ga0207686_10372894
519 Ga0207709_10165243
520 Ga0207670_10087006
521 Ga0207670_10166927
522 Ga0207670_10266169
523 Ga0207670_10288526
524 Ga0207669_10217544
525 Ga0207669_10248599
526 Ga0207704_10316164
527 Ga0207691_10091064
528 Ga0207691_10111936
529 Ga0207691_11086922
530 Ga0207711_10340915
531 Ga0207711_10889237
532 Ga0207689_10087593
533 Ga0207689_10669167
534 Ga0207679_10051159
535 Ga0207679_10119797
536 Ga0207667_10702587
537 Ga0207651_10141448
538 Ga0207651_11075021
539 Ga0207712_10258703
540 Ga0207712_10303079
541 Ga0207668_10202553
542 Ga0207640_10017352
543 Ga0207640_10357450
544 Ga0207658_10147171
545 Ga0207658_10178692
546 Ga0207658_10558637
547 Ga0207708_10007018
548 Ga0207708_10033310
549 Ga0207708_10071708
550 Ga0207708_10434218
551 Ga0207702_10097794
552 Ga0207641_10369101
553 Ga0207648_10006305
554 Ga0207648_10016672
555 Ga0207648_10257683
556 Ga0207648_10387622
557 Ga0207648_10590120
558 Ga0207676_11462205
559 Ga0207674_10165000
560 Ga0207674_10550407
561 Ga0207675_100141960
562 Ga0207675_100656935
563 Ga0207683_10165213
564 Ga0207683_10359897
565 Ga0207683_10528662
566 Ga0209982_1009403
567 Ga0209971_1004060
568 Ga0209813_10031723
569 Ga0209813_10123556
570 Ga0209974_10018980
571 Ga0207428_10030487
572 Ga0207428_10088833
573 Ga0207428_10275966
574 Ga0268265_10138984
575 Ga0268265_10270410
576 Ga0268264_10453515
577 Ga0268264_10755270
578 Ga0307408_100055312
579 Ga0307408_100452158
580 Ga0307413_10044224
581 Ga0307413_10522387
582 Ga0307410_10046360
583 Ga0307406_10018870
584 Ga0307407_10147202
585 Ga0307412_10341746
586 Ga0307409_100159118
587 Ga0307409_100322354
588 Ga0307409_100455966
589 Ga0307409_100735501
590 Ga0307414_10036223
591 Ga0307411_10008414
592 Ga0307411_10028046
593 Ga0373951_0067305
594 Ga0373952_0195943
595 Ga0373941_0015294
596 Ga0373955_0359187
597 Ga0373931_0265501
598 Ga0373927_0474948
599 Ga0436365_0382270
600 Ga0436365_0785730
601 Ga0436365_1367033
602 Ga0439443_054613
603 Ga0439457_073537
604 Ga0450923_003386
605 Ga0439435_0069499
606 Ga0439444_0014323
607 Ga0439444_0031566
608 Ga0439464_0118174
609 Ga0439440_0097936
610 Ga0495603_0205197
611 Ga0495582_0024573
612 Ga0495642_0200090
613 Ga0495621_0039454
614 Ga0495658_0026142
615 Ga0495589_0392625
616 Ga0495581_0091209
617 Ga0495675_0530328
618 Ga0496104_0192175
619 Ga0496106_0730874
620 Ga0496107_0152156
621 Ga0496109_0094399
622 Ga0496109_0405994
623 Ga0496111_0145945
624 Ga0496112_0005026
625 Ga0496112_0201079
626 Ga0496113_0013483
627 Ga0501034_0071317
628 Ga0501039_0978299
629 Ga0501067_0083186
630 Ga0501072_0120869
631 Ga0501074_0262899
632 Ga0501076_0340525
633 Ga0501081_0202613
634 nmdc:mga04h51_162613_c1
635 nmdc:mga04h51_22879_c1
636 nmdc:mga05p37_1120448_c1
637 nmdc:mga05p37_1200610_c1
638 nmdc:mga05p37_167373_c1
639 nmdc:mga09592_296035_c1
640 nmdc:mga09592_789677_c1
641 nmdc:mga06r32_142903_c1
642 nmdc:mga06r32_197092_c1
643 nmdc:mga08y16_126293_c1
644 nmdc:mga08y16_22143_c1
645 nmdc:mga08y16_3142_c1
646 nmdc:mga08y16_397396_c1
647 nmdc:mga08y16_506588_c1
648 nmdc:mga08y16_648736_c1
649 nmdc:mga08y16_794361_c1
650 nmdc:mga0n895_289643_c1
651 nmdc:mga0n895_482449_c1
652 nmdc:mga0rr50_125660_c1
653 nmdc:mga0rr50_443344_c1
654 nmdc:mga08x19_626025_c1
655 Ga0495619_0283461
656 Ga0500555_000613
657 Ga0500645_001053
658 Ga0530510_0045340

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

38

84

0.96

PF16925

TetR_C_13

Tetracyclin repressor-like, C-terminal domain

105

210

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3frq-assembly1.cif.gz_B structure of the macrolide biosensor protein, mphr(a), with erythromcyin 0.8419 9 193
6zui-assembly1.cif.gz_A crystal structure of the cys-ser mutant of the cpyfp-based biosensor for hypochlorous acid 0.8218 115 194
3g56-assembly1.cif.gz_A structure of the macrolide biosensor protein, mphr(a) 0.8156 9 193
6u18-assembly1.cif.gz_B directed evolution of a biosensor selective for the macrolide antibiotic clarithromycin 0.8136 9 193
3knw-assembly1.cif.gz_A crystal structure of a putative transcriptional regulator (tetr/acrr family member) from putative transcriptional regulator (tetr/acrr family) 0.7982 10 190
ID Description Score Start End Superfamily
3whbA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8873 11 51 1.10.10.60
3whcE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.887 11 51 1.10.10.60
1pb6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8793 11 58 1.10.10.60
3whcF01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.879 9 51 1.10.10.60
3whcC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8782 10 49 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A359LX34-F1-model_v4 TetR family transcriptional regulator 0.9938 1 194 GO:0003677
AF-A0A2V9AQ74-F1-model_v4 TetR family transcriptional regulator 0.978 1 195 GO:0003677
AF-A0A840P699-F1-model_v4 AcrR family transcriptional regulator 0.9748 13 194 GO:0000976
GO:0003700
AF-A0A7V8WDZ3-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9731 2 194 GO:0000976
GO:0003700
GO:0016020
AF-A0A7W1SFE8-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9706 1 194 GO:0003677
GO:0006355

Map