F409305

General Info

Members Datasets Scaffolds Average Seq Length
328 166 328 567

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10032619|Ga0307405_100326191
Length 632
Sequence MNANTALLPLCKIANAVNLTGVGQPERVGLSLVTANCSASCLKNRMREAAKRTLQGSLKIIKSASVKMNDETNNPAIKSGGTLQAFAECAEAVAATTRKLEKAAIVGSYLEALSDPDLTRAARYFAGHQFALNDARTTNVGGSIISAALSEATGFSPEDLYPRYVRLGDPGDLAAEIVKEAKRSFQPTITLAETESLIARLSETRGIKNKTALLTAVLHNASPLEAKYLVKLLSGDLRIGLREGLVEDAIARVFGRSLADVAYANMLLGDIGETATRARVGDLRDVNMRLFHPIKFMLATPAADLTDVARTMPEEFLVEDKFDGIRAQAHVESGRVAIYSRTMDEITHRFPELIEPLRSLTSDVIIDGEIIPANGEVILPFSELQKRLGRKNVGTQLLEAVPVALVAYDLLYAAGKVLIDQPLSERRHLLGQLVPDQGPLRMSRGKLLREAALLDDEFEQARARGNEGLMIKSPGSAYKPGRRGRDWLKLKRAIATLDVAVTAVEVGHGKRRHLLSDYTFAVRRSADDDELLNIGKAYSGLTDQELMDLTEWFKNHTLQEFAHGRVRVVEPTVVIEVTFDRVQPSKRHKSGYALRFPRILRLRPDKATTDIDTLETVRRLVEANESPQERRI

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
28 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
29 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
30 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
31 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
39 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
40 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
44 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
45 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
46 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
47 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
48 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
49 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
62 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
63 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
64 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
65 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
66 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
76 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
77 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
78 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
79 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
88 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
89 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
126 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
129 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
130 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
131 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
132 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
133 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
134 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
135 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
136 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
137 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
138 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
144 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
147 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
148 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
149 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
150 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
151 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
152 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
153 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
154 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
155 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
156 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
157 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
158 3300049770 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_B_4_control Metagenome Rhizosphere
159 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
160 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.52
Rhizosphere 97.56
Stem 0
Stem Tuber 0
Unclassified 0.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_422489 2162886006 Unclassified 2023
2 SwRhRL2b_contig_3389335 2162886007 Bacteria 3383
3 JGI24748J21848_1000001 3300002074 Bacteria 444271
4 JGI24751J29686_10000003 3300002459 Bacteria 157815
5 rootL2_10012643 3300003322 Bacteria 8296
6 rootL2_10166294 3300003322 Bacteria 2302
7 Ga0065714_10064425 3300005288 Bacteria 189652
8 Ga0065704_10002271 3300005289 Bacteria 6169
9 Ga0065704_10080273 3300005289 Unclassified 3979
10 Ga0065712_10001420 3300005290 Bacteria 7276
11 Ga0065712_10067727 3300005290 Bacteria 189643
12 Ga0065712_10076595 3300005290 Unclassified 3635
13 Ga0065715_10001937 3300005293 Bacteria 5382
14 Ga0065715_10003727 3300005293 Bacteria 7385
15 Ga0065715_10091099 3300005293 Bacteria 6114
16 Ga0065715_10101534 3300005293 Bacteria 3157
17 Ga0065707_10085143 3300005295 Bacteria 6413
18 Ga0065707_10089105 3300005295 Unclassified 4468
19 Ga0065707_10096238 3300005295 Unclassified 3289
20 Ga0065707_10115433 3300005295 Unclassified 2267
21 Ga0070690_100001565 3300005330 Bacteria 12003
22 Ga0070670_100002734 3300005331 Bacteria 14564
23 Ga0070670_100042352 3300005331 Bacteria 3914
24 Ga0068869_100000744 3300005334 Bacteria 18527
25 Ga0068869_100003478 3300005334 Bacteria 9635
26 Ga0068869_100004040 3300005334 Bacteria 9080
27 Ga0068869_100070339 3300005334 Bacteria 2589
28 Ga0070680_100005515 3300005336 Bacteria 9575
29 Ga0070682_100024449 3300005337 Unclassified 3596
30 Ga0070682_100038855 3300005337 Bacteria 2921
31 Ga0068868_100057056 3300005338 Bacteria 3084
32 Ga0070689_100001417 3300005340 Bacteria 15287
33 Ga0070687_100002183 3300005343 Bacteria 7239
34 Ga0070687_100019852 3300005343 Bacteria 3133
35 Ga0070692_10004068 3300005345 Bacteria 6046
36 Ga0070692_10049851 3300005345 Unclassified 2173
37 Ga0070669_100013624 3300005353 Bacteria 5778
38 Ga0070669_100026711 3300005353 Bacteria 4154
39 Ga0070671_100028764 3300005355 Bacteria 4580
40 Ga0070671_100031582 3300005355 Unclassified 4376
41 Ga0070671_100041397 3300005355 Unclassified 3829
42 Ga0070674_100067538 3300005356 Bacteria 2515
43 Ga0070673_100004203 3300005364 Bacteria 9079
44 Ga0070673_100006419 3300005364 Bacteria 7643
45 Ga0070688_100005919 3300005365 Bacteria 6479
46 Ga0070659_100004562 3300005366 Bacteria 9901
47 Ga0070667_100027420 3300005367 Bacteria 4738
48 Ga0070667_100181177 3300005367 Bacteria 1863
49 Ga0070701_10011859 3300005438 Bacteria 3912
50 Ga0070705_100001584 3300005440 Bacteria 11919
51 Ga0070705_100016290 3300005440 Bacteria 3862
52 Ga0070705_100017914 3300005440 Bacteria 3703
53 Ga0070700_100000248 3300005441 Bacteria 29509
54 Ga0070700_100004629 3300005441 Bacteria 7205
55 Ga0070700_100016949 3300005441 Unclassified 4158
56 Ga0070700_100021959 3300005441 Bacteria 3715
57 Ga0070694_100004682 3300005444 Bacteria 8233
58 Ga0070694_100024380 3300005444 Unclassified 3905
59 Ga0070694_100045089 3300005444 Bacteria 2954
60 Ga0070694_100114538 3300005444 Unclassified 1925
61 Ga0070708_100000042 3300005445 Bacteria 83511
62 Ga0070708_100131700 3300005445 Bacteria 2315
63 Ga0070681_10000053 3300005458 Bacteria 81387
64 Ga0070681_10002770 3300005458 Bacteria 16179
65 Ga0070681_10002871 3300005458 Bacteria 15923
66 Ga0070681_10129284 3300005458 Bacteria 2458
67 Ga0068867_100005459 3300005459 Bacteria 8997
68 Ga0068867_100021038 3300005459 Bacteria 4653
69 Ga0070685_10004116 3300005466 Bacteria 7339
70 Ga0070706_100000053 3300005467 Bacteria 139565
71 Ga0070707_100048515 3300005468 Bacteria 4067
72 Ga0070698_100010208 3300005471 Bacteria 10031
73 Ga0070698_100012416 3300005471 Bacteria 9020
74 Ga0070698_100014984 3300005471 Bacteria 8195
75 Ga0070698_100050317 3300005471 Bacteria 4249
76 Ga0070699_100003957 3300005518 Bacteria 13093
77 Ga0070699_100008959 3300005518 Bacteria 8670
78 Ga0070699_100014264 3300005518 Bacteria 6836
79 Ga0070699_100098552 3300005518 Bacteria 2561
80 Ga0070679_100000030 3300005530 Bacteria 108148
81 Ga0070679_100014846 3300005530 Bacteria 7483
82 Ga0070679_100038517 3300005530 Bacteria 4753
83 Ga0070697_100000684 3300005536 Bacteria 25478
84 Ga0070697_100001105 3300005536 Bacteria 20397
85 Ga0070697_100009649 3300005536 Bacteria 7540
86 Ga0070697_100097150 3300005536 Bacteria 2444
87 Ga0068853_100024493 3300005539 Bacteria 5060
88 Ga0068853_100038414 3300005539 Bacteria 4077
89 Ga0070672_100011341 3300005543 Bacteria 6216
90 Ga0070695_100054405 3300005545 Bacteria 2576
91 Ga0070696_100035600 3300005546 Unclassified 3429
92 Ga0070696_100048309 3300005546 Bacteria 2954
93 Ga0070693_100004283 3300005547 Bacteria 6735
94 Ga0070693_100054362 3300005547 Bacteria 2302
95 Ga0070693_100075021 3300005547 Unclassified 2002
96 Ga0070664_100002813 3300005564 Bacteria 14067
97 Ga0070664_100079135 3300005564 Bacteria 2829
98 Ga0068857_100000975 3300005577 Bacteria 21916
99 Ga0068857_100067154 3300005577 Bacteria 3191
100 Ga0068854_100013206 3300005578 Bacteria 5412
101 Ga0070702_100002993 3300005615 Bacteria 7467
102 Ga0070702_100009758 3300005615 Bacteria 4709
103 Ga0068859_100012208 3300005617 Bacteria 8636
104 Ga0068859_100028871 3300005617 Bacteria 5563
105 Ga0068859_100031309 3300005617 Bacteria 5341
106 Ga0068859_100056971 3300005617 Bacteria 3936
107 Ga0068859_100059348 3300005617 Bacteria 3854
108 Ga0068859_100068613 3300005617 Unclassified 3580
109 Ga0068859_100080258 3300005617 Bacteria 3303
110 Ga0068859_100131053 3300005617 Bacteria 2579
111 Ga0068864_100002204 3300005618 Bacteria 16082
112 Ga0068864_100007319 3300005618 Bacteria 9083
113 Ga0068864_100025905 3300005618 Unclassified 4942
114 Ga0068864_100104744 3300005618 Unclassified 2513
115 Ga0068861_100021461 3300005719 Unclassified 4641
116 Ga0068851_10000327 3300005834 Bacteria 21602
117 Ga0068863_100018647 3300005841 Bacteria 6639
118 Ga0068858_100050175 3300005842 Bacteria 3862
119 Ga0068858_100075810 3300005842 Bacteria 3124
120 Ga0068860_100025066 3300005843 Bacteria 5757
121 Ga0068860_100036394 3300005843 Bacteria 4717
122 Ga0068860_100068032 3300005843 Bacteria 3384
123 Ga0081539_10003540 3300005985 Bacteria 18990
124 Ga0081539_10015381 3300005985 Bacteria 5564
125 Ga0097621_100000803 3300006237 Bacteria 22128
126 Ga0097621_100085252 3300006237 Unclassified 2634
127 Ga0068871_100005642 3300006358 Bacteria 8779
128 Ga0068871_100007157 3300006358 Bacteria 7959
129 Ga0068871_100029059 3300006358 Unclassified 4340
130 Ga0068871_100064402 3300006358 Bacteria 3001
131 Ga0075428_100079110 3300006844 Bacteria 3588
132 Ga0075428_100165573 3300006844 Bacteria 2398
133 Ga0075430_100126712 3300006846 Unclassified 2128
134 Ga0075431_100032184 3300006847 Bacteria 5404
135 Ga0075433_10017343 3300006852 Bacteria 5963
136 Ga0075433_10031744 3300006852 Bacteria 4517
137 Ga0075433_10079024 3300006852 Unclassified 2899
138 Ga0075434_100051624 3300006871 Bacteria 4086
139 Ga0075434_100091528 3300006871 Bacteria 3043
140 Ga0075429_100050644 3300006880 Unclassified 3613
141 Ga0075436_100000002 3300006914 Bacteria 475522
142 Ga0075436_100071793 3300006914 Bacteria 2394
143 Ga0097620_100012208 3300006931 Bacteria 8636
144 Ga0097620_100028873 3300006931 Bacteria 5563
145 Ga0097620_100031311 3300006931 Bacteria 5341
146 Ga0097620_100056970 3300006931 Bacteria 3936
147 Ga0097620_100059352 3300006931 Bacteria 3854
148 Ga0097620_100068611 3300006931 Unclassified 3580
149 Ga0097620_100080257 3300006931 Bacteria 3303
150 Ga0097620_100131058 3300006931 Bacteria 2579
151 Ga0075435_100017249 3300007076 Bacteria 5460
152 Ga0105240_10016704 3300009093 Bacteria 9927
153 Ga0111539_10002073 3300009094 Bacteria 26784
154 Ga0111539_10057087 3300009094 Bacteria 4637
155 Ga0111539_10090361 3300009094 Unclassified 3599
156 Ga0111539_10164696 3300009094 Viruses 2593
157 Ga0111539_10215840 3300009094 Bacteria 2235
158 Ga0105247_10001395 3300009101 Bacteria 17528
159 Ga0105247_10024331 3300009101 Unclassified 3649
160 Ga0114129_10019464 3300009147 Bacteria 9665
161 Ga0114129_10024648 3300009147 Bacteria 8526
162 Ga0114129_10030385 3300009147 Bacteria 7643
163 Ga0114129_10033873 3300009147 Bacteria 7215
164 Ga0114129_10041211 3300009147 Bacteria 6508
165 Ga0114129_10050386 3300009147 Bacteria 5849
166 Ga0105243_10056675 3300009148 Bacteria 3117
167 Ga0105243_10106666 3300009148 Unclassified 2336
168 Ga0105241_10010827 3300009174 Bacteria 6691
169 Ga0105241_10041274 3300009174 Bacteria 3485
170 Ga0105241_10053017 3300009174 Unclassified 3100
171 Ga0105241_10103463 3300009174 Bacteria 2267
172 Ga0105242_10003987 3300009176 Bacteria 11469
173 Ga0105242_10088458 3300009176 Bacteria 2602
174 Ga0105242_10093602 3300009176 Bacteria 2534
175 Ga0105248_10002530 3300009177 Bacteria 20349
176 Ga0105248_10009475 3300009177 Bacteria 10717
177 Ga0105248_10022022 3300009177 Bacteria 7061
178 Ga0105248_10040901 3300009177 Bacteria 5197
179 Ga0105237_10000521 3300009545 Bacteria 54240
180 Ga0105237_10187427 3300009545 Bacteria 2069
181 Ga0105238_10083668 3300009551 Bacteria 3180
182 Ga0105249_10000003 3300009553 Bacteria 370855
183 Ga0105249_10008243 3300009553 Bacteria 9075
184 Ga0105249_10030025 3300009553 Unclassified 4911
185 Ga0157378_10002720 3300013297 Bacteria 15748
186 Ga0157378_10071269 3300013297 Unclassified 3121
187 Ga0157378_10154056 3300013297 Unclassified 2143
188 Ga0163162_10000020 3300013306 Bacteria 220558
189 Ga0163162_10003062 3300013306 Bacteria 15975
190 Ga0163162_10006767 3300013306 Bacteria 11122
191 Ga0163162_10074554 3300013306 Bacteria 3452
192 Ga0157372_10024677 3300013307 Bacteria 6534
193 Ga0157375_10039290 3300013308 Bacteria 4554
194 Ga0157375_10063679 3300013308 Unclassified 3670
195 Ga0163163_10002712 3300014325 Bacteria 14952
196 Ga0163163_10003502 3300014325 Bacteria 13315
197 Ga0163163_10015709 3300014325 Bacteria 7010
198 Ga0163163_10018666 3300014325 Bacteria 6497
199 Ga0163163_10021068 3300014325 Bacteria 6149
200 Ga0163163_10202468 3300014325 Unclassified 2033
201 Ga0157380_10001344 3300014326 Bacteria 16017
202 Ga0157380_10017871 3300014326 Bacteria 5257
203 Ga0157379_10163413 3300014968 Bacteria 2010
204 Ga0157376_10003004 3300014969 Bacteria 11574
205 Ga0163161_10004864 3300017792 Bacteria 9356
206 Ga0207653_10002822 3300025885 Bacteria 5521
207 Ga0207653_10019557 3300025885 Bacteria 2135
208 Ga0207642_10036119 3300025899 Bacteria 2118
209 Ga0207710_10001757 3300025900 Bacteria 10454
210 Ga0207647_10009231 3300025904 Bacteria 7014
211 Ga0207647_10034384 3300025904 Bacteria 3236
212 Ga0207643_10002482 3300025908 Bacteria 9969
213 Ga0207643_10007425 3300025908 Bacteria 5879
214 Ga0207684_10000053 3300025910 Bacteria 225260
215 Ga0207684_10008787 3300025910 Bacteria 8969
216 Ga0207684_10022807 3300025910 Bacteria 5345
217 Ga0207707_10000063 3300025912 Bacteria 108163
218 Ga0207662_10008435 3300025918 Bacteria 5640
219 Ga0207662_10011138 3300025918 Bacteria 4977
220 Ga0207652_10000091 3300025921 Bacteria 98787
221 Ga0207652_10139512 3300025921 Bacteria 2167
222 Ga0207681_10002893 3300025923 Bacteria 10854
223 Ga0207650_10000007 3300025925 Bacteria 530810
224 Ga0207650_10003476 3300025925 Bacteria 10821
225 Ga0207687_10012296 3300025927 Bacteria 5596
226 Ga0207644_10000648 3300025931 Bacteria 21996
227 Ga0207644_10051401 3300025931 Bacteria 2958
228 Ga0207690_10016063 3300025932 Bacteria 4551
229 Ga0207686_10025855 3300025934 Bacteria 3421
230 Ga0207670_10005299 3300025936 Bacteria 7062
231 Ga0207691_10001901 3300025940 Bacteria 20406
232 Ga0207691_10037087 3300025940 Bacteria 4515
233 Ga0207711_10010132 3300025941 Bacteria 7829
234 Ga0207711_10014020 3300025941 Bacteria 6659
235 Ga0207711_10052324 3300025941 Bacteria 3499
236 Ga0207711_10059456 3300025941 Bacteria 3291
237 Ga0207711_10163796 3300025941 Bacteria 2014
238 Ga0207689_10001437 3300025942 Bacteria 22761
239 Ga0207689_10005749 3300025942 Bacteria 11013
240 Ga0207689_10008601 3300025942 Bacteria 8889
241 Ga0207689_10053867 3300025942 Unclassified 3314
242 Ga0207679_10006179 3300025945 Bacteria 7563
243 Ga0207651_10026946 3300025960 Bacteria 3601
244 Ga0207712_10000153 3300025961 Bacteria 70890
245 Ga0207712_10005050 3300025961 Bacteria 8352
246 Ga0207640_10035165 3300025981 Bacteria 3133
247 Ga0207658_10155542 3300025986 Bacteria 1868
248 Ga0207677_10009278 3300026023 Bacteria 5530
249 Ga0207703_10131442 3300026035 Bacteria 2162
250 Ga0207639_10015640 3300026041 Bacteria 5354
251 Ga0207708_10000471 3300026075 Bacteria 31120
252 Ga0207708_10022179 3300026075 Bacteria 4795
253 Ga0207708_10025540 3300026075 Bacteria 4471
254 Ga0207702_10004091 3300026078 Bacteria 13085
255 Ga0207641_10026523 3300026088 Bacteria 4783
256 Ga0207648_10002466 3300026089 Bacteria 19879
257 Ga0207648_10026208 3300026089 Bacteria 5182
258 Ga0207648_10079972 3300026089 Bacteria 2851
259 Ga0207676_10004138 3300026095 Bacteria 10246
260 Ga0207676_10006766 3300026095 Bacteria 8115
261 Ga0207676_10016457 3300026095 Bacteria 5354
262 Ga0207674_10000058 3300026116 Bacteria 113012
263 Ga0207674_10036612 3300026116 Bacteria 5109
264 Ga0207674_10061359 3300026116 Unclassified 3799
265 Ga0207674_10069218 3300026116 Bacteria 3550
266 Ga0207675_100002530 3300026118 Bacteria 18076
267 Ga0207675_100013461 3300026118 Bacteria 7633
268 Ga0207675_100031305 3300026118 Bacteria 4957
269 Ga0207675_100118073 3300026118 Bacteria 2508
270 Ga0207683_10036578 3300026121 Bacteria 4276
271 Ga0207698_10035482 3300026142 Bacteria 3649
272 Ga0207428_10065676 3300027907 Bacteria 2861
273 Ga0268265_10059083 3300028380 Bacteria 2932
274 Ga0268264_10009676 3300028381 Bacteria 7984
275 Ga0268264_10011357 3300028381 Bacteria 7357
276 Ga0314311_1236253 3300030733 Bacteria 1930
277 Ga0307513_10001314 3300031456 Bacteria 35933
278 Ga0307405_10010534 3300031731 Unclassified 4799
279 Ga0307405_10032619 3300031731 Unclassified 3080
280 Ga0307405_10039099 3300031731 Bacteria 2865
281 Ga0307412_10048110 3300031911 Unclassified 2803
282 Ga0307414_10087255 3300032004 Bacteria 2305
283 Ga0307415_100001568 3300032126 Bacteria 11013
284 Ga0373951_0002124 3300035091 Bacteria 5062
285 Ga0395898_0017371 3300037466 Bacteria 7350
286 Ga0395898_0042006 3300037466 Unclassified 4514
287 Ga0495610_0022198 3300046512 Bacteria 3477
288 Ga0495663_0000209 3300046525 Bacteria 23355
289 Ga0495598_0000206 3300046537 Bacteria 10355
290 Ga0496102_0008302 3300048905 Bacteria 8896
291 Ga0496104_0036674 3300048907 Bacteria 4584
292 Ga0496106_0017498 3300048909 Bacteria 5303
293 Ga0496108_0026576 3300048911 Unclassified 4775
294 Ga0496108_0140570 3300048911 Bacteria 2080
295 Ga0501296_001914 3300049519 Bacteria 2128
296 Ga0501298_002824 3300049521 Unclassified 2660
297 Ga0501038_0012172 3300049574 Bacteria 7854
298 Ga0501217_003631 3300049661 Bacteria 3125
299 Ga0501227_000561 3300049665 Bacteria 8085
300 Ga0501227_002301 3300049665 Bacteria 4223
301 Ga0501233_006933 3300049668 Unclassified 2144
302 Ga0501235_001764 3300049669 Unclassified 4635
303 Ga0501235_006158 3300049669 Bacteria 2613
304 Ga0501236_001383 3300049670 Bacteria 2760
305 Ga0501249_006114 3300049679 Unclassified 2473
306 Ga0501252_002075 3300049682 Unclassified 1951
307 Ga0501257_006759 3300049686 Unclassified 2551
308 Ga0501225_0002645 3300049705 Bacteria 5503
309 Ga0501225_0010965 3300049705 Bacteria 2556
310 Ga0501225_0013967 3300049705 Bacteria 2245
311 Ga0501229_002041 3300049706 Unclassified 2369
312 Ga0501234_002458 3300049707 Unclassified 2915
313 Ga0501245_002639 3300049708 Unclassified 2404
314 Ga0501273_000354 3300049770 Bacteria 3616
315 Ga0501283_000594 3300049779 Unclassified 4752
316 Ga0501226_000555 3300049853 Bacteria 5148
317 nmdc:mga05p37_24566_c1 3300050507 Bacteria 7325
318 nmdc:mga05p37_5317_c1 3300050507 Bacteria 15117
319 nmdc:mga05p37_78725_c1 3300050507 Bacteria 4059
320 nmdc:mga08y16_172630_c1 3300050511 Bacteria 2245
321 nmdc:mga08y16_7943_c1 3300050511 Bacteria 11106
322 nmdc:mga08y16_9247_c1 3300050511 Bacteria 10338
323 nmdc:mga0n895_102127_c1 3300050512 Bacteria 2878
324 nmdc:mga08x19_9_c1 3300050514 Bacteria 418852
325 nmdc:mga0a205_10363_c1 3300050515 Bacteria 8566
326 nmdc:mga0a205_36198_c1 3300050515 Bacteria 4742
327 nmdc:mga0a205_44313_c1 3300050515 Bacteria 4288
328 Ga0530510_0034730 3300061734 Unclassified 3633

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013308 Ga0157375_10063679 Ga0157375_100636793 526
2 3300014326 Ga0157380_10017871 Ga0157380_100178714 531
3 3300005330 Ga0070690_100001565 Ga0070690_1000015658 532
4 3300049707 Ga0501234_002458 Ga0501234_002458_901_2529 542
5 3300005356 Ga0070674_100067538 Ga0070674_1000675381 543
6 3300006914 Ga0075436_100000002 Ga0075436_100000002122 545
7 3300050514 nmdc:mga08x19_9_c1 nmdc:mga08x19_9_c1_274830_276482 545
8 3300002074 JGI24748J21848_1000001 JGI24748J21848_1000001369 546
9 3300025931 Ga0207644_10000648 Ga0207644_1000064811 546
10 3300050512 nmdc:mga0n895_102127_c1 nmdc:mga0n895_102127_c1_539_2188 549
11 3300005458 Ga0070681_10000053 Ga0070681_1000005370 550
12 3300005530 Ga0070679_100000030 Ga0070679_10000003095 550
13 3300025912 Ga0207707_10000063 Ga0207707_1000006393 550
14 3300025921 Ga0207652_10000091 Ga0207652_100000918 550
15 3300006852 Ga0075433_10017343 Ga0075433_100173434 551
16 3300009147 Ga0114129_10041211 Ga0114129_100412113 551
17 3300009545 Ga0105237_10187427 Ga0105237_101874272 551
18 3300025981 Ga0207640_10035165 Ga0207640_100351653 551
19 3300026078 Ga0207702_10004091 Ga0207702_100040913 551
20 3300048905 Ga0496102_0008302 Ga0496102_0008302_2628_4283 551
21 3300048907 Ga0496104_0036674 Ga0496104_0036674_2662_4317 551
22 3300048909 Ga0496106_0017498 Ga0496106_0017498_865_2520 551
23 3300050507 nmdc:mga05p37_78725_c1 nmdc:mga05p37_78725_c1_935_2590 551
24 3300050515 nmdc:mga0a205_36198_c1 nmdc:mga0a205_36198_c1_2576_4231 551
25 3300005444 Ga0070694_100114538 Ga0070694_1001145382 552
26 3300009148 Ga0105243_10056675 Ga0105243_100566752 552
27 3300025921 Ga0207652_10139512 Ga0207652_101395121 552
28 3300026118 Ga0207675_100013461 Ga0207675_1000134613 552
29 3300028380 Ga0268265_10059083 Ga0268265_100590833 552
30 3300005336 Ga0070680_100005515 Ga0070680_1000055156 553
31 3300005366 Ga0070659_100004562 Ga0070659_1000045627 553
32 3300005458 Ga0070681_10002871 Ga0070681_100028718 553
33 3300005530 Ga0070679_100014846 Ga0070679_1000148463 553
34 3300005539 Ga0068853_100024493 Ga0068853_1000244933 553
35 3300005564 Ga0070664_100002813 Ga0070664_1000028136 553
36 3300005577 Ga0068857_100000975 Ga0068857_1000009752 553
37 3300006871 Ga0075434_100091528 Ga0075434_1000915282 553
38 3300009176 Ga0105242_10003987 Ga0105242_100039875 553
39 3300009177 Ga0105248_10040901 Ga0105248_100409014 553
40 3300013306 Ga0163162_10003062 Ga0163162_100030629 553
41 3300014325 Ga0163163_10015709 Ga0163163_100157094 553
42 3300014325 Ga0163163_10018666 Ga0163163_100186662 553
43 3300025932 Ga0207690_10016063 Ga0207690_100160632 553
44 3300025941 Ga0207711_10010132 Ga0207711_100101327 553
45 3300025941 Ga0207711_10059456 Ga0207711_100594563 553
46 3300025945 Ga0207679_10006179 Ga0207679_100061795 553
47 3300026116 Ga0207674_10000058 Ga0207674_1000005881 553
48 3300028381 Ga0268264_10011357 Ga0268264_100113577 553
49 3300005471 Ga0070698_100010208 Ga0070698_1000102087 554
50 3300005536 Ga0070697_100001105 Ga0070697_1000011057 554
51 3300005546 Ga0070696_100035600 Ga0070696_1000356002 554
52 3300006844 Ga0075428_100079110 Ga0075428_1000791102 554
53 3300013297 Ga0157378_10154056 Ga0157378_101540562 554
54 3300009553 Ga0105249_10000003 Ga0105249_10000003238 555
55 3300013306 Ga0163162_10000020 Ga0163162_1000002049 555
56 3300025961 Ga0207712_10000153 Ga0207712_100001534 555
57 3300005289 Ga0065704_10080273 Ga0065704_100802733 556
58 3300005295 Ga0065707_10089105 Ga0065707_100891054 556
59 3300005331 Ga0070670_100002734 Ga0070670_1000027341 556
60 3300005345 Ga0070692_10049851 Ga0070692_100498512 556
61 3300005441 Ga0070700_100004629 Ga0070700_1000046294 556
62 3300005719 Ga0068861_100021461 Ga0068861_1000214614 556
63 3300009094 Ga0111539_10090361 Ga0111539_100903613 556
64 3300009094 Ga0111539_10164696 Ga0111539_101646963 556
65 3300009147 Ga0114129_10033873 Ga0114129_100338736 556
66 3300009176 Ga0105242_10093602 Ga0105242_100936022 556
67 3300009553 Ga0105249_10030025 Ga0105249_100300251 556
68 3300013297 Ga0157378_10071269 Ga0157378_100712693 556
69 3300014326 Ga0157380_10001344 Ga0157380_100013446 556
70 3300025925 Ga0207650_10003476 Ga0207650_100034762 556
71 3300005337 Ga0070682_100024449 Ga0070682_1000244491 557
72 3300005353 Ga0070669_100026711 Ga0070669_1000267113 557
73 3300005841 Ga0068863_100018647 Ga0068863_1000186473 557
74 3300025923 Ga0207681_10002893 Ga0207681_100028933 557
75 3300025960 Ga0207651_10026946 Ga0207651_100269461 557
76 3300026088 Ga0207641_10026523 Ga0207641_100265233 557
77 3300003322 rootL2_10012643 rootL2_100126434 558
78 3300005290 Ga0065712_10076595 Ga0065712_100765953 558
79 3300005295 Ga0065707_10096238 Ga0065707_100962382 558
80 3300005334 Ga0068869_100000744 Ga0068869_10000074411 558
81 3300005334 Ga0068869_100004040 Ga0068869_1000040403 558
82 3300005440 Ga0070705_100017914 Ga0070705_1000179141 558
83 3300005444 Ga0070694_100004682 Ga0070694_1000046825 558
84 3300005471 Ga0070698_100012416 Ga0070698_1000124165 558
85 3300005536 Ga0070697_100000684 Ga0070697_1000006849 558
86 3300005578 Ga0068854_100013206 Ga0068854_1000132063 558
87 3300005617 Ga0068859_100080258 Ga0068859_1000802584 558
88 3300006846 Ga0075430_100126712 Ga0075430_1001267121 558
89 3300006847 Ga0075431_100032184 Ga0075431_1000321842 558
90 3300006880 Ga0075429_100050644 Ga0075429_1000506443 558
91 3300006931 Ga0097620_100080257 Ga0097620_1000802571 558
92 3300009094 Ga0111539_10215840 Ga0111539_102158402 558
93 3300009147 Ga0114129_10030385 Ga0114129_100303854 558
94 3300025885 Ga0207653_10019557 Ga0207653_100195571 558
95 3300025910 Ga0207684_10022807 Ga0207684_100228073 558
96 3300025934 Ga0207686_10025855 Ga0207686_100258553 558
97 3300025942 Ga0207689_10005749 Ga0207689_100057498 558
98 3300025942 Ga0207689_10008601 Ga0207689_100086017 558
99 3300026118 Ga0207675_100031305 Ga0207675_1000313053 558
100 3300046512 Ga0495610_0022198 Ga0495610_0022198_12_1703 558
101 3300046525 Ga0495663_0000209 Ga0495663_0000209_6526_8217 558
102 3300046537 Ga0495598_0000206 Ga0495598_0000206_6116_7807 558
103 3300050507 nmdc:mga05p37_24566_c1 nmdc:mga05p37_24566_c1_3378_5069 558
104 3300050511 nmdc:mga08y16_172630_c1 nmdc:mga08y16_172630_c1_100_1776 558
105 3300061734 Ga0530510_0034730 Ga0530510_0034730_1795_3486 558
106 3300005444 Ga0070694_100045089 Ga0070694_1000450892 559
107 3300005458 Ga0070681_10129284 Ga0070681_101292842 559
108 3300005471 Ga0070698_100014984 Ga0070698_1000149841 559
109 3300005545 Ga0070695_100054405 Ga0070695_1000544051 559
110 3300005546 Ga0070696_100048309 Ga0070696_1000483092 559
111 3300005547 Ga0070693_100075021 Ga0070693_1000750211 559
112 3300006914 Ga0075436_100071793 Ga0075436_1000717932 559
113 3300026116 Ga0207674_10069218 Ga0207674_100692181 559
114 3300049661 Ga0501217_003631 Ga0501217_003631_703_2382 559
115 3300049705 Ga0501225_0010965 Ga0501225_0010965_667_2346 559
116 3300005293 Ga0065715_10091099 Ga0065715_100910996 560
117 3300005331 Ga0070670_100042352 Ga0070670_1000423524 560
118 3300005334 Ga0068869_100003478 Ga0068869_1000034785 560
119 3300005334 Ga0068869_100070339 Ga0068869_1000703391 560
120 3300005338 Ga0068868_100057056 Ga0068868_1000570562 560
121 3300005343 Ga0070687_100002183 Ga0070687_1000021835 560
122 3300005353 Ga0070669_100013624 Ga0070669_1000136244 560
123 3300005355 Ga0070671_100028764 Ga0070671_1000287645 560
124 3300005355 Ga0070671_100031582 Ga0070671_1000315823 560
125 3300005364 Ga0070673_100004203 Ga0070673_1000042038 560
126 3300005365 Ga0070688_100005919 Ga0070688_1000059194 560
127 3300005367 Ga0070667_100027420 Ga0070667_1000274204 560
128 3300005367 Ga0070667_100181177 Ga0070667_1001811771 560
129 3300005438 Ga0070701_10011859 Ga0070701_100118593 560
130 3300005459 Ga0068867_100005459 Ga0068867_1000054594 560
131 3300005466 Ga0070685_10004116 Ga0070685_100041167 560
132 3300005471 Ga0070698_100050317 Ga0070698_1000503171 560
133 3300005518 Ga0070699_100008959 Ga0070699_1000089598 560
134 3300005530 Ga0070679_100038517 Ga0070679_1000385173 560
135 3300005536 Ga0070697_100097150 Ga0070697_1000971501 560
136 3300005564 Ga0070664_100079135 Ga0070664_1000791354 560
137 3300005615 Ga0070702_100002993 Ga0070702_1000029937 560
138 3300005617 Ga0068859_100012208 Ga0068859_1000122085 560
139 3300005617 Ga0068859_100056971 Ga0068859_1000569713 560
140 3300005618 Ga0068864_100007319 Ga0068864_1000073195 560
141 3300005842 Ga0068858_100075810 Ga0068858_1000758103 560
142 3300005985 Ga0081539_10015381 Ga0081539_100153814 560
143 3300006237 Ga0097621_100085252 Ga0097621_1000852522 560
144 3300006358 Ga0068871_100005642 Ga0068871_1000056423 560
145 3300006358 Ga0068871_100029059 Ga0068871_1000290592 560
146 3300006931 Ga0097620_100012208 Ga0097620_1000122085 560
147 3300006931 Ga0097620_100056970 Ga0097620_1000569703 560
148 3300009174 Ga0105241_10010827 Ga0105241_100108273 560
149 3300009177 Ga0105248_10009475 Ga0105248_1000947510 560
150 3300013297 Ga0157378_10002720 Ga0157378_100027205 560
151 3300013306 Ga0163162_10006767 Ga0163162_100067678 560
152 3300014325 Ga0163163_10002712 Ga0163163_100027124 560
153 3300014325 Ga0163163_10021068 Ga0163163_100210684 560
154 3300014969 Ga0157376_10003004 Ga0157376_100030045 560
155 3300017792 Ga0163161_10004864 Ga0163161_100048647 560
156 3300025899 Ga0207642_10036119 Ga0207642_100361192 560
157 3300025918 Ga0207662_10011138 Ga0207662_100111384 560
158 3300025927 Ga0207687_10012296 Ga0207687_100122962 560
159 3300025931 Ga0207644_10051401 Ga0207644_100514012 560
160 3300025940 Ga0207691_10001901 Ga0207691_100019016 560
161 3300025941 Ga0207711_10052324 Ga0207711_100523243 560
162 3300025942 Ga0207689_10001437 Ga0207689_1000143710 560
163 3300025986 Ga0207658_10155542 Ga0207658_101555422 560
164 3300026023 Ga0207677_10009278 Ga0207677_100092782 560
165 3300026089 Ga0207648_10002466 Ga0207648_100024668 560
166 3300026095 Ga0207676_10016457 Ga0207676_100164574 560
167 3300026118 Ga0207675_100002530 Ga0207675_1000025306 560
168 3300026121 Ga0207683_10036578 Ga0207683_100365782 560
169 3300031456 Ga0307513_10001314 Ga0307513_100013147 560
170 3300005617 Ga0068859_100028871 Ga0068859_1000288714 561
171 3300006931 Ga0097620_100028873 Ga0097620_1000288733 561
172 3300005355 Ga0070671_100041397 Ga0070671_1000413971 562
173 3300005543 Ga0070672_100011341 Ga0070672_1000113414 562
174 3300005617 Ga0068859_100068613 Ga0068859_1000686132 562
175 3300005842 Ga0068858_100050175 Ga0068858_1000501753 562
176 3300005843 Ga0068860_100036394 Ga0068860_1000363943 562
177 3300006931 Ga0097620_100068611 Ga0097620_1000686112 562
178 3300009101 Ga0105247_10024331 Ga0105247_100243313 562
179 3300025918 Ga0207662_10008435 Ga0207662_100084353 562
180 3300025940 Ga0207691_10037087 Ga0207691_100370873 562
181 3300028381 Ga0268264_10009676 Ga0268264_100096763 562
182 3300035091 Ga0373951_0002124 Ga0373951_0002124_1359_3053 562
183 3300005340 Ga0070689_100001417 Ga0070689_1000014178 563
184 3300005618 Ga0068864_100025905 Ga0068864_1000259053 563
185 3300025908 Ga0207643_10002482 Ga0207643_100024828 563
186 3300025936 Ga0207670_10005299 Ga0207670_100052994 563
187 3300026089 Ga0207648_10079972 Ga0207648_100799721 563
188 3300026095 Ga0207676_10004138 Ga0207676_100041387 563
189 3300026116 Ga0207674_10036612 Ga0207674_100366122 563
190 3300005441 Ga0070700_100000248 Ga0070700_10000024825 564
191 3300009177 Ga0105248_10002530 Ga0105248_1000253010 564
192 3300026075 Ga0207708_10000471 Ga0207708_1000047123 564
193 3300031731 Ga0307405_10032619 Ga0307405_100326191 564
194 3300031911 Ga0307412_10048110 Ga0307412_100481103 564
195 3300032126 Ga0307415_100001568 Ga0307415_1000015688 564
196 3300049665 Ga0501227_000561 Ga0501227_000561_4649_6346 564
197 3300049682 Ga0501252_002075 Ga0501252_002075_10_1773 564
198 3300049705 Ga0501225_0002645 Ga0501225_0002645_1414_3111 564
199 3300049706 Ga0501229_002041 Ga0501229_002041_306_2081 564
200 3300049853 Ga0501226_000555 Ga0501226_000555_727_2424 564
201 3300005441 Ga0070700_100016949 Ga0070700_1000169493 565
202 3300005536 Ga0070697_100009649 Ga0070697_1000096493 565
203 3300005617 Ga0068859_100031309 Ga0068859_1000313094 565
204 3300005617 Ga0068859_100131053 Ga0068859_1001310531 565
205 3300005843 Ga0068860_100068032 Ga0068860_1000680323 565
206 3300006931 Ga0097620_100031311 Ga0097620_1000313114 565
207 3300006931 Ga0097620_100131058 Ga0097620_1001310581 565
208 3300009147 Ga0114129_10050386 Ga0114129_100503862 565
209 3300014968 Ga0157379_10163413 Ga0157379_101634131 565
210 3300025910 Ga0207684_10008787 Ga0207684_100087875 565
211 3300025941 Ga0207711_10163796 Ga0207711_101637961 565
212 3300026075 Ga0207708_10025540 Ga0207708_100255402 565
213 3300030733 Ga0314311_1236253 Ga0314311_12362531 565
214 3300049669 Ga0501235_001764 Ga0501235_001764_2810_4519 565
215 3300049779 Ga0501283_000594 Ga0501283_000594_2764_4473 565
216 3300050511 nmdc:mga08y16_9247_c1 nmdc:mga08y16_9247_c1_5057_6799 565
217 3300002459 JGI24751J29686_10000003 JGI24751J29686_1000000361 566
218 3300003322 rootL2_10166294 rootL2_101662942 566
219 3300005290 Ga0065712_10001420 Ga0065712_100014205 566
220 3300005293 Ga0065715_10003727 Ga0065715_100037275 566
221 3300005295 Ga0065707_10115433 Ga0065707_101154332 566
222 3300005467 Ga0070706_100000053 Ga0070706_100000053101 566
223 3300005547 Ga0070693_100004283 Ga0070693_1000042834 566
224 3300005617 Ga0068859_100059348 Ga0068859_1000593481 566
225 3300005985 Ga0081539_10003540 Ga0081539_1000354015 566
226 3300006931 Ga0097620_100059352 Ga0097620_1000593525 566
227 3300007076 Ga0075435_100017249 Ga0075435_1000172494 566
228 3300009101 Ga0105247_10001395 Ga0105247_1000139514 566
229 3300009148 Ga0105243_10106666 Ga0105243_101066661 566
230 3300009177 Ga0105248_10022022 Ga0105248_100220224 566
231 3300009551 Ga0105238_10083668 Ga0105238_100836683 566
232 3300009553 Ga0105249_10008243 Ga0105249_100082437 566
233 3300014325 Ga0163163_10202468 Ga0163163_102024682 566
234 3300025900 Ga0207710_10001757 Ga0207710_100017571 566
235 3300025904 Ga0207647_10034384 Ga0207647_100343842 566
236 3300025908 Ga0207643_10007425 Ga0207643_100074254 566
237 3300025910 Ga0207684_10000053 Ga0207684_1000005398 566
238 3300025925 Ga0207650_10000007 Ga0207650_10000007302 566
239 3300025941 Ga0207711_10014020 Ga0207711_100140203 566
240 3300025942 Ga0207689_10053867 Ga0207689_100538673 566
241 3300025961 Ga0207712_10005050 Ga0207712_100050507 566
242 3300026118 Ga0207675_100118073 Ga0207675_1001180732 566
243 3300026142 Ga0207698_10035482 Ga0207698_100354824 566
244 3300031731 Ga0307405_10010534 Ga0307405_100105344 566
245 3300048911 Ga0496108_0026576 Ga0496108_0026576_223_1938 566
246 3300049521 Ga0501298_002824 Ga0501298_002824_820_2535 566
247 3300049669 Ga0501235_006158 Ga0501235_006158_80_1789 566
248 3300049705 Ga0501225_0013967 Ga0501225_0013967_174_1883 566
249 3300005293 Ga0065715_10101534 Ga0065715_101015341 567
250 3300005444 Ga0070694_100024380 Ga0070694_1000243804 567
251 3300005445 Ga0070708_100000042 Ga0070708_1000000422 567
252 3300005458 Ga0070681_10002770 Ga0070681_1000277011 567
253 3300005468 Ga0070707_100048515 Ga0070707_1000485151 567
254 3300005518 Ga0070699_100014264 Ga0070699_1000142641 567
255 3300037466 Ga0395898_0017371 Ga0395898_0017371_4529_6277 567
256 3300037466 Ga0395898_0042006 Ga0395898_0042006_904_2610 567
257 3300005343 Ga0070687_100019852 Ga0070687_1000198523 568
258 3300005440 Ga0070705_100001584 Ga0070705_1000015847 568
259 3300005518 Ga0070699_100098552 Ga0070699_1000985521 568
260 3300005577 Ga0068857_100067154 Ga0068857_1000671543 568
261 3300005615 Ga0070702_100009758 Ga0070702_1000097583 568
262 3300005618 Ga0068864_100002204 Ga0068864_10000220414 568
263 3300005834 Ga0068851_10000327 Ga0068851_1000032713 568
264 3300006844 Ga0075428_100165573 Ga0075428_1001655731 568
265 3300006852 Ga0075433_10031744 Ga0075433_100317443 568
266 3300006871 Ga0075434_100051624 Ga0075434_1000516243 568
267 3300009093 Ga0105240_10016704 Ga0105240_100167044 568
268 3300009094 Ga0111539_10057087 Ga0111539_100570873 568
269 3300009147 Ga0114129_10019464 Ga0114129_100194643 568
270 3300009174 Ga0105241_10041274 Ga0105241_100412743 568
271 3300009545 Ga0105237_10000521 Ga0105237_1000052143 568
272 3300013307 Ga0157372_10024677 Ga0157372_100246774 568
273 3300014325 Ga0163163_10003502 Ga0163163_100035027 568
274 3300025885 Ga0207653_10002822 Ga0207653_100028224 568
275 3300026095 Ga0207676_10006766 Ga0207676_100067665 568
276 3300026116 Ga0207674_10061359 Ga0207674_100613593 568
277 3300027907 Ga0207428_10065676 Ga0207428_100656763 568
278 3300050507 nmdc:mga05p37_5317_c1 nmdc:mga05p37_5317_c1_5308_7023 568
279 3300050515 nmdc:mga0a205_44313_c1 nmdc:mga0a205_44313_c1_2404_4134 568
280 3300005459 Ga0068867_100021038 Ga0068867_1000210382 569
281 3300005547 Ga0070693_100054362 Ga0070693_1000543621 569
282 3300005618 Ga0068864_100104744 Ga0068864_1001047441 569
283 3300005843 Ga0068860_100025066 Ga0068860_1000250663 569
284 3300009174 Ga0105241_10103463 Ga0105241_101034631 569
285 3300009176 Ga0105242_10088458 Ga0105242_100884581 569
286 3300013306 Ga0163162_10074554 Ga0163162_100745542 569
287 3300026035 Ga0207703_10131442 Ga0207703_101314422 569
288 3300026089 Ga0207648_10026208 Ga0207648_100262084 569
289 2162886006 SwRhRL3b_contig_422489 SwRhRL3b_0805.00000940 570
290 2162886007 SwRhRL2b_contig_3389335 SwRhRL2b_0254.00003660 570
291 3300005288 Ga0065714_10064425 Ga0065714_1006442591 570
292 3300005289 Ga0065704_10002271 Ga0065704_100022715 570
293 3300005290 Ga0065712_10067727 Ga0065712_1006772791 570
294 3300005293 Ga0065715_10001937 Ga0065715_100019374 570
295 3300005295 Ga0065707_10085143 Ga0065707_100851435 570
296 3300005337 Ga0070682_100038855 Ga0070682_1000388552 570
297 3300005345 Ga0070692_10004068 Ga0070692_100040684 570
298 3300005364 Ga0070673_100006419 Ga0070673_1000064195 570
299 3300005440 Ga0070705_100016290 Ga0070705_1000162901 570
300 3300005441 Ga0070700_100021959 Ga0070700_1000219592 570
301 3300005445 Ga0070708_100131700 Ga0070708_1001317002 570
302 3300005518 Ga0070699_100003957 Ga0070699_1000039573 570
303 3300005539 Ga0068853_100038414 Ga0068853_1000384142 570
304 3300006237 Ga0097621_100000803 Ga0097621_1000008038 570
305 3300006358 Ga0068871_100007157 Ga0068871_1000071573 570
306 3300006358 Ga0068871_100064402 Ga0068871_1000644023 570
307 3300006852 Ga0075433_10079024 Ga0075433_100790242 570
308 3300009094 Ga0111539_10002073 Ga0111539_1000207321 570
309 3300009147 Ga0114129_10024648 Ga0114129_100246486 570
310 3300009174 Ga0105241_10053017 Ga0105241_100530173 570
311 3300013308 Ga0157375_10039290 Ga0157375_100392903 570
312 3300025904 Ga0207647_10009231 Ga0207647_100092315 570
313 3300026041 Ga0207639_10015640 Ga0207639_100156405 570
314 3300026075 Ga0207708_10022179 Ga0207708_100221793 570
315 3300031731 Ga0307405_10039099 Ga0307405_100390991 570
316 3300032004 Ga0307414_10087255 Ga0307414_100872551 570
317 3300048911 Ga0496108_0140570 Ga0496108_0140570_107_1846 570
318 3300049519 Ga0501296_001914 Ga0501296_001914_121_1839 570
319 3300049574 Ga0501038_0012172 Ga0501038_0012172_1511_3250 570
320 3300049665 Ga0501227_002301 Ga0501227_002301_1589_3307 570
321 3300049668 Ga0501233_006933 Ga0501233_006933_387_2105 570
322 3300049670 Ga0501236_001383 Ga0501236_001383_335_2053 570
323 3300049679 Ga0501249_006114 Ga0501249_006114_327_2045 570
324 3300049686 Ga0501257_006759 Ga0501257_006759_18_1736 570
325 3300049708 Ga0501245_002639 Ga0501245_002639_354_2072 570
326 3300049770 Ga0501273_000354 Ga0501273_000354_1188_2906 570
327 3300050511 nmdc:mga08y16_7943_c1 nmdc:mga08y16_7943_c1_2567_4279 570
328 3300050515 nmdc:mga0a205_10363_c1 nmdc:mga0a205_10363_c1_5978_7714 570

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01068

DNA_ligase_A_M

ATP dependent DNA ligase domain

296

491

0.96

PF04675

DNA_ligase_A_N

DNA ligase N terminus

82

251

0.92

PF04679

DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

511

606

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rpw-assembly1.cif.gz_E archaeal dna ligase and heterotrimeric pcna in complex with adenylated dna 0.8863 14 424
7rpw-assembly1.cif.gz_E archaeal dna ligase and heterotrimeric pcna in complex with adenylated dna 0.8316 14 424
8b8t-assembly1.cif.gz_A open conformation of the complex of dna ligase i on pcna and dna in the presence of atp 0.8223 14 187
7sx5-assembly1.cif.gz_A crystal structure of ligase i with nick duplexes containing mismatch a:c 0.7945 19 555
6p0a-assembly1.cif.gz_A human dna ligase 1 bound to an adenylated, dideoxy terminated dna nick with 2 mm mg2+ 0.7856 17 555
ID Description Score Start End Superfamily
af_Q57635_441_573_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9595 424 557 2.40.50.140
3rr5A03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.938 426 556 2.40.50.140
af_Q57635_441_573_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9315 424 557 2.40.50.140
2hixA02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;DNA ligase/mRNA capping enzyme 0.9258 225 424 3.30.470.30
af_P9WNV5_381_507_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9248 427 552 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A2V8Q3M4-F1-model_v4 DNA ligase (ATP) (EC 6.5.1.1) 0.987 452 557 GO:0003910
GO:0006281
GO:0006310
AF-A0A7J4LRI1-F1-model_v4 ATP-dependent DNA ligase family profile domain-containing protein 0.9617 427 556 GO:0003910
GO:0005524
GO:0006266
GO:0006273
GO:0006281
GO:0006310
AF-A0A2V8QWT0-F1-model_v4 DNA ligase ATP-dependent N-terminal domain-containing protein 0.948 12 138 GO:0003677
GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A7Y7DKG2-F1-model_v4 DNA ligase (ATP) (EC 6.5.1.1) 0.9432 423 553 GO:0003910
GO:0006281
GO:0006310
AF-A0A535UB66-F1-model_v4 DNA ligase (ATP) (EC 6.5.1.1) 0.9425 432 564 GO:0003910
GO:0006281
GO:0006310

Feature Viewer

pLDDT pTM Quality
84.25 0.7 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map