F408844

General Info

Members Datasets Scaffolds Average Seq Length
327 212 654 167

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10182536|Ga0265316_101825362
Length 183
Sequence MTDTMTDPGGASVHASAVLVGNRAVLIRGPSGAGKSRLAFDLILAGRAGQLPAAILVGDDRVHLEAGHGQLHGQLMVRPARELAGLIEIRGLGIRRCEFAKQAVVGLVVDLAAEDAERLPPPQALQTDIYGIKIPRIPVATGFSGLPLVIAELIMTASSSTTQPSADCSKGIGNHISPTIATE

Samples

Sample ID Description Type Environment
1 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
32 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
77 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
78 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
79 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
82 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
89 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
92 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
93 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
94 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
95 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
96 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
97 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
98 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
99 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
100 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
101 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
102 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
103 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
106 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
107 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
108 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
117 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
118 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
119 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
120 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
121 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
125 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
126 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
127 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
128 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
132 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
133 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
134 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
135 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
138 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
139 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
140 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
141 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
142 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
145 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
146 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
147 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
148 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
149 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
150 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
151 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
152 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
153 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
154 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
155 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
156 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
160 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
161 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
162 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
163 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
166 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
167 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
168 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
169 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
170 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
171 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
172 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
173 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
174 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
175 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
176 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
177 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
178 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
179 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
180 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
181 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
182 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
183 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
184 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
185 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
186 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
187 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
188 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
189 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
190 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
191 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
192 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
193 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
194 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
195 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
196 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
197 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
198 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
199 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
200 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
201 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
202 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
203 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
204 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
205 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
206 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
207 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
208 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
209 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
210 2513237101 Bradyrhizobium murdochi WSM1741 Isolate Nodule
211 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
212 2874604998 Bradyrhizobium sp. LMTR 3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.47
Metatranscriptomes 0.61
Isolates 0.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.5
Nodule 0.92
Rhizoplane 9.17
Rhizosphere 82.87
Stem 0
Stem Tuber 0
Unclassified 1.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265316_10182536 3300031344 Bacteria 1562
2 JGI25406J46586_10000308 3300003203 Bacteria 21987
3 JGI25404J52841_10004133 3300003659 Bacteria 2920
4 Ga0070658_10074107 3300005327 Bacteria 2792
5 Ga0070683_100071062 3300005329 Bacteria 3247
6 Ga0070683_101101657 3300005329 Bacteria 763
7 Ga0068869_100661747 3300005334 Bacteria 887
8 Ga0070680_100007077 3300005336 Bacteria 8552
9 Ga0070680_100415314 3300005336 Bacteria 1148
10 Ga0070691_10087338 3300005341 Bacteria 1534
11 Ga0070661_100058378 3300005344 Bacteria 2828
12 Ga0070661_100495300 3300005344 Bacteria 977
13 Ga0070674_100158231 3300005356 Bacteria 1716
14 Ga0070659_100047493 3300005366 Bacteria 3368
15 Ga0070659_100316107 3300005366 Bacteria 1305
16 Ga0070710_10149462 3300005437 Bacteria 1439
17 Ga0070711_100061100 3300005439 Bacteria 2622
18 Ga0070708_100073549 3300005445 Bacteria 3081
19 Ga0070681_10196447 3300005458 Bacteria 1936
20 Ga0070706_100162348 3300005467 Bacteria 2086
21 Ga0070679_100024982 3300005530 Bacteria 5857
22 Ga0070679_100282135 3300005530 Bacteria 1613
23 Ga0070684_100003445 3300005535 Bacteria 11873
24 Ga0068853_100135841 3300005539 Bacteria 2204
25 Ga0068855_100054049 3300005563 Bacteria 4722
26 Ga0070664_100349466 3300005564 Bacteria 1345
27 Ga0068857_100048500 3300005577 Bacteria 3770
28 Ga0068854_100016283 3300005578 Bacteria 4953
29 Ga0068856_100000432 3300005614 Bacteria 45968
30 Ga0068856_100086289 3300005614 Bacteria 3118
31 Ga0068856_100292051 3300005614 Bacteria 1647
32 Ga0068852_100250527 3300005616 Bacteria 1697
33 Ga0068863_100551417 3300005841 Bacteria 1138
34 Ga0068860_100905401 3300005843 Bacteria 898
35 Ga0081538_10018847 3300005981 Bacteria 5161
36 Ga0081538_10107079 3300005981 Bacteria 1386
37 Ga0081540_1032797 3300005983 Bacteria 2829
38 Ga0070712_100107184 3300006175 Bacteria 2078
39 Ga0075367_10787159 3300006178 Bacteria 606
40 Ga0075369_10200514 3300006186 Bacteria 921
41 Ga0075366_10227313 3300006195 Bacteria 1137
42 Ga0075370_10370281 3300006353 Bacteria 857
43 Ga0075436_100256163 3300006914 Bacteria 1247
44 Ga0105240_10027735 3300009093 Bacteria 7411
45 Ga0105247_10194556 3300009101 Bacteria 1359
46 Ga0105243_10330537 3300009148 Bacteria 1392
47 Ga0105237_10014413 3300009545 Bacteria 8267
48 Ga0105238_10018259 3300009551 Bacteria 7134
49 Ga0105238_10363345 3300009551 Bacteria 1437
50 Ga0099796_10004946 3300010159 Bacteria 3280
51 Ga0099796_10027184 3300010159 Bacteria 1825
52 Ga0099796_10027410 3300010159 Bacteria 1819
53 Ga0099796_10093219 3300010159 Bacteria 1122
54 Ga0105239_10030111 3300010375 Bacteria 5968
55 Ga0105239_10700760 3300010375 Bacteria 1158
56 Ga0157370_10023960 3300013104 Bacteria 6051
57 Ga0163162_10049342 3300013306 Bacteria 4218
58 Ga0163162_10365617 3300013306 Bacteria 1575
59 Ga0163162_10996319 3300013306 Bacteria 947
60 Ga0157372_11611824 3300013307 Bacteria 747
61 Ga0163163_10446129 3300014325 Bacteria 1354
62 Ga0157380_11587709 3300014326 Bacteria 709
63 Ga0157379_10032588 3300014968 Bacteria 4646
64 Ga0206356_10140418 3300020070 Bacteria 662
65 Ga0206356_10533441 3300020070 Bacteria 736
66 Ga0213872_10157624 3300021361 Bacteria 989
67 Ga0209758_1002546 3300025297 Bacteria 18379
68 Ga0207692_10140579 3300025898 Bacteria 1373
69 Ga0207705_10507402 3300025909 Bacteria 937
70 Ga0207707_10001959 3300025912 Bacteria 18715
71 Ga0207695_10048122 3300025913 Bacteria 4506
72 Ga0207693_10031724 3300025915 Bacteria 4175
73 Ga0207663_10134503 3300025916 Bacteria 1714
74 Ga0207660_10003702 3300025917 Bacteria 9962
75 Ga0207660_10090901 3300025917 Bacteria 2262
76 Ga0207657_10003938 3300025919 Bacteria 15764
77 Ga0207657_10330836 3300025919 Bacteria 1203
78 Ga0207649_10027984 3300025920 Bacteria 3314
79 Ga0207652_10005955 3300025921 Bacteria 9865
80 Ga0207694_10030464 3300025924 Bacteria 4121
81 Ga0207690_10208041 3300025932 Bacteria 1490
82 Ga0207670_10072000 3300025936 Bacteria 2392
83 Ga0207665_10058562 3300025939 Bacteria 2605
84 Ga0207661_10852289 3300025944 Bacteria 839
85 Ga0207667_10014216 3300025949 Bacteria 9083
86 Ga0207640_10011259 3300025981 Bacteria 5060
87 Ga0207677_11606100 3300026023 Bacteria 602
88 Ga0207639_10016574 3300026041 Bacteria 5216
89 Ga0207639_10138470 3300026041 Bacteria 2025
90 Ga0207702_10000598 3300026078 Bacteria 39935
91 Ga0207702_10240232 3300026078 Bacteria 1697
92 Ga0207674_10039718 3300026116 Bacteria 4877
93 Ga0207698_10168227 3300026142 Bacteria 1927
94 Ga0209179_1005030 3300027512 Bacteria 2040
95 Ga0268266_11199747 3300028379 Bacteria 734
96 Ga0265330_10013121 3300031235 Bacteria 3865
97 Ga0265330_10121616 3300031235 Bacteria 1112
98 Ga0265330_10144781 3300031235 Bacteria 1010
99 Ga0265332_10002279 3300031238 Bacteria 9819
100 Ga0265332_10120997 3300031238 Bacteria 1099
101 Ga0265328_10197684 3300031239 Bacteria 763
102 Ga0265328_10238722 3300031239 Bacteria 694
103 Ga0265325_10003166 3300031241 Bacteria 10821
104 Ga0265340_10001325 3300031247 Bacteria 14185
105 Ga0265339_10181410 3300031249 Bacteria 1048
106 Ga0265339_10356536 3300031249 Bacteria 689
107 Ga0265331_10093432 3300031250 Bacteria 1389
108 Ga0265316_10294466 3300031344 Bacteria 1183
109 Ga0265313_10197500 3300031595 Bacteria 838
110 Ga0307508_10244074 3300031616 Bacteria 1393
111 Ga0265314_10029150 3300031711 Bacteria 4106
112 Ga0265342_10085336 3300031712 Bacteria 1817
113 Ga0265342_10113776 3300031712 Bacteria 1529
114 Ga0265342_10402198 3300031712 Bacteria 707
115 Ga0307516_10009179 3300031730 Bacteria 11073
116 Ga0373934_0002972 3300035086 Bacteria 6196
117 Ga0373934_0055416 3300035086 Bacteria 1575
118 Ga0373934_0321332 3300035086 Unclassified 643
119 Ga0373944_0003971 3300035089 Bacteria 3828
120 Ga0373923_0000233 3300035111 Bacteria 11758
121 Ga0373923_0005658 3300035111 Bacteria 4258
122 Ga0373923_0039458 3300035111 Bacteria 1939
123 Ga0373936_0001469 3300035113 Bacteria 8565
124 Ga0373936_0117284 3300035113 Bacteria 1134
125 Ga0373936_0357603 3300035113 Bacteria 666
126 Ga0373945_0002037 3300035116 Bacteria 6284
127 Ga0373953_0000315 3300035117 Bacteria 12982
128 Ga0373953_0008225 3300035117 Bacteria 3533
129 Ga0373954_0000544 3300035118 Bacteria 14116
130 Ga0373954_0004902 3300035118 Bacteria 5777
131 Ga0373954_0046849 3300035118 Bacteria 2021
132 Ga0373956_0001464 3300035119 Bacteria 9759
133 Ga0373956_0062546 3300035119 Bacteria 1687
134 Ga0373957_0000132 3300035120 Bacteria 18518
135 Ga0373957_0028311 3300035120 Bacteria 2041
136 Ga0373957_0036597 3300035120 Bacteria 1829
137 Ga0373943_0001467 3300035170 Bacteria 10671
138 Ga0373955_0001029 3300035172 Bacteria 11840
139 Ga0373955_0013026 3300035172 Bacteria 4010
140 Ga0373924_0002229 3300035410 Bacteria 6496
141 Ga0373924_0011711 3300035410 Bacteria 3262
142 Ga0373924_0014344 3300035410 Bacteria 2993
143 Ga0373931_0674724 3300035691 Bacteria 681
144 Ga0373935_0004769 3300035692 Bacteria 7972
145 Ga0373927_0001771 3300035695 Bacteria 16107
146 Ga0373927_0040695 3300035695 Bacteria 3015
147 Ga0373933_0000915 3300035724 Bacteria 18020
148 Ga0373933_0004346 3300035724 Bacteria 7780
149 Ga0373933_0022318 3300035724 Bacteria 3603
150 Ga0373933_0050022 3300035724 Bacteria 2493
151 Ga0373947_0011828 3300035725 Bacteria 5000
152 Ga0373947_0600075 3300035725 Bacteria 750
153 Ga0373937_0022362 3300036401 Bacteria 5685
154 Ga0373937_0072627 3300036401 Bacteria 3174
155 Ga0373925_0082677 3300037068 Bacteria 2444
156 Ga0373925_0111509 3300037068 Bacteria 2114
157 Ga0436360_0774012 3300039438 Bacteria 1236
158 Ga0436361_0635446 3300039447 Bacteria 1490
159 Ga0495592_0002799 3300046454 Bacteria 12368
160 Ga0495592_0167217 3300046454 Bacteria 1508
161 Ga0495592_0178975 3300046454 Bacteria 1445
162 Ga0495603_0001520 3300046455 Bacteria 13535
163 Ga0495629_0001273 3300046459 Bacteria 19816
164 Ga0495629_0083952 3300046459 Bacteria 2222
165 Ga0495641_0008010 3300046461 Bacteria 6511
166 Ga0495651_0001500 3300046462 Bacteria 18061
167 Ga0495651_0032471 3300046462 Bacteria 4071
168 Ga0495651_0062204 3300046462 Bacteria 2856
169 Ga0495653_0007568 3300046463 Bacteria 8878
170 Ga0495653_0125172 3300046463 Bacteria 1826
171 Ga0495580_0003905 3300046472 Bacteria 12594
172 Ga0495582_0001297 3300046473 Bacteria 14041
173 Ga0495605_0129493 3300046474 Bacteria 1139
174 Ga0495639_0002755 3300046475 Bacteria 7632
175 Ga0495662_0285992 3300046476 Unclassified 811
176 Ga0495664_0011287 3300046477 Bacteria 5034
177 Ga0495664_0056481 3300046477 Bacteria 2335
178 Ga0495584_0005618 3300046491 Bacteria 6632
179 Ga0495585_0006845 3300046492 Bacteria 7032
180 Ga0495594_0031760 3300046499 Bacteria 2864
181 Ga0495607_0026167 3300046501 Bacteria 3622
182 Ga0495583_0350245 3300046506 Unclassified 583
183 Ga0495606_0003013 3300046507 Bacteria 18453
184 Ga0495608_0001214 3300046511 Bacteria 18263
185 Ga0495608_0026708 3300046511 Bacteria 3934
186 Ga0495608_0137529 3300046511 Bacteria 1560
187 Ga0495618_0030915 3300046514 Bacteria 3347
188 Ga0495618_0055718 3300046514 Bacteria 2503
189 Ga0495618_0064780 3300046514 Bacteria 2322
190 Ga0495628_0022913 3300046516 Bacteria 5126
191 Ga0495630_0020908 3300046517 Bacteria 4830
192 Ga0495631_0419598 3300046518 Unclassified 570
193 Ga0495637_0370440 3300046520 Unclassified 500
194 Ga0495644_0002157 3300046523 Bacteria 7898
195 Ga0495648_0190572 3300046524 Bacteria 1035
196 Ga0495666_0076943 3300046526 Bacteria 1581
197 Ga0495652_0003248 3300046529 Bacteria 16204
198 Ga0495652_0102064 3300046529 Bacteria 2324
199 Ga0495652_0289974 3300046529 Bacteria 1194
200 Ga0495665_0003475 3300046531 Bacteria 8550
201 Ga0495640_0010798 3300046533 Bacteria 7045
202 Ga0495640_0036276 3300046533 Bacteria 3483
203 Ga0495586_0049979 3300046535 Bacteria 2262
204 Ga0495587_0038358 3300046536 Bacteria 2873
205 Ga0495587_0047714 3300046536 Bacteria 2538
206 Ga0495609_0260276 3300046538 Unclassified 713
207 Ga0495621_0091624 3300046539 Bacteria 1146
208 Ga0495645_0013653 3300046543 Bacteria 5754
209 Ga0495645_0167290 3300046543 Bacteria 1515
210 Ga0495633_0011218 3300046558 Bacteria 4845
211 Ga0495667_0000340 3300046559 Bacteria 29603
212 Ga0495667_0002885 3300046559 Bacteria 11523
213 Ga0495667_0021465 3300046559 Bacteria 4357
214 Ga0495656_0014672 3300046615 Bacteria 2942
215 Ga0495634_0003624 3300046642 Bacteria 12338
216 Ga0495634_0038378 3300046642 Bacteria 3266
217 Ga0495634_0041372 3300046642 Bacteria 3129
218 Ga0495611_0015431 3300046648 Bacteria 3266
219 Ga0495635_0000220 3300046663 Bacteria 36107
220 Ga0495635_0001534 3300046663 Bacteria 15469
221 Ga0495635_0091250 3300046663 Bacteria 2083
222 Ga0495659_0005361 3300046664 Bacteria 4034
223 Ga0495661_0043091 3300046665 Bacteria 2777
224 Ga0495657_0007062 3300046675 Bacteria 8712
225 Ga0495657_0051230 3300046675 Bacteria 2772
226 Ga0495599_0004396 3300046678 Bacteria 8347
227 Ga0495599_0031445 3300046678 Bacteria 3331
228 Ga0495623_0040283 3300046679 Bacteria 2983
229 Ga0495623_0071840 3300046679 Bacteria 2152
230 Ga0495646_0026782 3300046680 Bacteria 3618
231 Ga0495646_0145163 3300046680 Bacteria 1323
232 Ga0495647_0000331 3300046681 Bacteria 13256
233 Ga0495658_0003454 3300046683 Bacteria 7809
234 Ga0495658_0040893 3300046683 Bacteria 2579
235 Ga0495613_0006218 3300046689 Bacteria 8930
236 Ga0495613_0024162 3300046689 Bacteria 4529
237 Ga0495613_0598704 3300046689 Bacteria 734
238 Ga0495624_0007403 3300046690 Bacteria 7705
239 Ga0495670_0003105 3300046691 Bacteria 8187
240 Ga0495589_0069524 3300046794 Bacteria 1722
241 Ga0495600_0000811 3300046809 Bacteria 16603
242 Ga0495600_0019043 3300046809 Bacteria 4381
243 Ga0495581_0001710 3300047315 Bacteria 12224
244 Ga0495604_0000980 3300047317 Bacteria 23805
245 Ga0495604_0135453 3300047317 Bacteria 1765
246 Ga0495674_0014594 3300047319 Bacteria 7351
247 Ga0495674_0016715 3300047319 Bacteria 6844
248 Ga0495674_0041687 3300047319 Bacteria 4099
249 Ga0495672_0037759 3300047320 Bacteria 2952
250 Ga0495672_0053511 3300047320 Bacteria 2365
251 Ga0495676_0011536 3300047321 Bacteria 7968
252 Ga0495680_0001491 3300047322 Bacteria 25179
253 Ga0495680_0003737 3300047322 Bacteria 14826
254 Ga0495675_0039158 3300047444 Bacteria 3018
255 Ga0495675_0091328 3300047444 Bacteria 1911
256 Ga0495675_0245237 3300047444 Bacteria 1077
257 Ga0495684_0000133 3300047471 Bacteria 54433
258 Ga0495684_0000711 3300047471 Bacteria 26762
259 Ga0495593_0000309 3300047673 Bacteria 26737
260 Ga0495593_0001898 3300047673 Bacteria 12447
261 Ga0495602_0006150 3300048088 Bacteria 12589
262 Ga0495602_0130307 3300048088 Bacteria 2007
263 Ga0495602_0317808 3300048088 Bacteria 1134
264 Ga0495614_0005239 3300048089 Bacteria 5848
265 Ga0496100_0050556 3300048903 Bacteria 2694
266 Ga0496100_0051961 3300048903 Bacteria 2663
267 Ga0496101_0075387 3300048904 Bacteria 2483
268 Ga0496101_0264739 3300048904 Bacteria 1341
269 Ga0496101_0422614 3300048904 Bacteria 1051
270 Ga0496102_0011382 3300048905 Bacteria 7666
271 Ga0496104_0001919 3300048907 Bacteria 18016
272 Ga0496105_0037424 3300048908 Bacteria 3995
273 Ga0496105_0349556 3300048908 Bacteria 1181
274 Ga0496106_0004282 3300048909 Bacteria 10612
275 Ga0496107_0049340 3300048910 Bacteria 3033
276 Ga0496108_0000442 3300048911 Bacteria 33309
277 Ga0496108_0029184 3300048911 Bacteria 4567
278 Ga0496109_0000904 3300048912 Bacteria 24697
279 Ga0496109_0179326 3300048912 Bacteria 1989
280 Ga0496110_0004772 3300048913 Bacteria 10561
281 Ga0496110_0108266 3300048913 Bacteria 2495
282 Ga0496110_0466019 3300048913 Bacteria 1151
283 Ga0496111_0332788 3300048914 Bacteria 1124
284 Ga0496112_0000051 3300048915 Bacteria 82351
285 Ga0496112_0004605 3300048915 Bacteria 11730
286 Ga0496112_0189409 3300048915 Bacteria 2020
287 Ga0496112_0460043 3300048915 Bacteria 1210
288 Ga0496113_0026376 3300048916 Bacteria 4154
289 Ga0496113_0272140 3300048916 Bacteria 1354
290 Ga0496113_0688906 3300048916 Bacteria 816
291 Ga0496114_0394244 3300048917 Bacteria 1226
292 Ga0496115_0014423 3300048918 Bacteria 5982
293 Ga0496115_0099839 3300048918 Bacteria 2379
294 Ga0496115_0313189 3300048918 Bacteria 1285
295 Ga0496118_0168157 3300048921 Bacteria 1344
296 Ga0496119_0079376 3300048922 Bacteria 1896
297 Ga0496121_0007720 3300048924 Bacteria 12905
298 Ga0501067_0319875 3300049583 Bacteria 864
299 Ga0501069_0140809 3300049585 Bacteria 1384
300 nmdc:mga03683_40913_c1 3300050489 Bacteria 1902
301 nmdc:mga0k408_159307_c1 3300050493 Bacteria 1344
302 nmdc:mga0k408_381874_c1 3300050493 Bacteria 839
303 nmdc:mga04h51_357411_c1 3300050495 Bacteria 605
304 nmdc:mga07m45_186849_c1 3300050496 Bacteria 1205
305 nmdc:mga0n895_1357538_c1 3300050512 Bacteria 680
306 Ga0495601_0010269 3300053077 Bacteria 5568
307 Ga0495601_0166472 3300053077 Bacteria 1440
308 Ga0495601_0341958 3300053077 Bacteria 973
309 Ga0495612_0044798 3300053078 Bacteria 1810
310 Ga0495612_0101125 3300053078 Bacteria 1227
311 Ga0495595_0002222 3300053084 Bacteria 7550
312 Ga0495595_0004894 3300053084 Bacteria 5402
313 Ga0495595_0025907 3300053084 Bacteria 2601
314 Ga0495619_0000997 3300053085 Bacteria 18562
315 Ga0495619_0006451 3300053085 Bacteria 7427
316 Ga0495619_0020200 3300053085 Bacteria 4239
317 Ga0500651_0003688 3300053093 Bacteria 8435
318 Ga0500566_0150560 3300053094 Bacteria 1224
319 Ga0500595_011877 3300053119 Bacteria 3389
320 Ga0500595_021554 3300053119 Bacteria 2297
321 Ga0500642_0011132 3300053130 Bacteria 3205
322 Ga0500559_0001674 3300053136 Bacteria 12239
323 Ga0500604_0168833 3300053151 Bacteria 747
324 Ga0500627_0017905 3300053158 Bacteria 2794
325 2513698134 2513237101 Bacteria 7952346
326 2728749268 2728368998 Bacteria 8720350
327 2874608594 2874604998 Bacteria 7834745
328 Ga0265316_10182536
329 JGI25406J46586_10000308
330 JGI25404J52841_10004133
331 Ga0070658_10074107
332 Ga0070683_100071062
333 Ga0070683_101101657
334 Ga0068869_100661747
335 Ga0070680_100007077
336 Ga0070680_100415314
337 Ga0070691_10087338
338 Ga0070661_100058378
339 Ga0070661_100495300
340 Ga0070674_100158231
341 Ga0070659_100047493
342 Ga0070659_100316107
343 Ga0070710_10149462
344 Ga0070711_100061100
345 Ga0070708_100073549
346 Ga0070681_10196447
347 Ga0070706_100162348
348 Ga0070679_100024982
349 Ga0070679_100282135
350 Ga0070684_100003445
351 Ga0068853_100135841
352 Ga0068855_100054049
353 Ga0070664_100349466
354 Ga0068857_100048500
355 Ga0068854_100016283
356 Ga0068856_100000432
357 Ga0068856_100086289
358 Ga0068856_100292051
359 Ga0068852_100250527
360 Ga0068863_100551417
361 Ga0068860_100905401
362 Ga0081538_10018847
363 Ga0081538_10107079
364 Ga0081540_1032797
365 Ga0070712_100107184
366 Ga0075367_10787159
367 Ga0075369_10200514
368 Ga0075366_10227313
369 Ga0075370_10370281
370 Ga0075436_100256163
371 Ga0105240_10027735
372 Ga0105247_10194556
373 Ga0105243_10330537
374 Ga0105237_10014413
375 Ga0105238_10018259
376 Ga0105238_10363345
377 Ga0099796_10004946
378 Ga0099796_10027184
379 Ga0099796_10027410
380 Ga0099796_10093219
381 Ga0105239_10030111
382 Ga0105239_10700760
383 Ga0157370_10023960
384 Ga0163162_10049342
385 Ga0163162_10365617
386 Ga0163162_10996319
387 Ga0157372_11611824
388 Ga0163163_10446129
389 Ga0157380_11587709
390 Ga0157379_10032588
391 Ga0206356_10140418
392 Ga0206356_10533441
393 Ga0213872_10157624
394 Ga0209758_1002546
395 Ga0207692_10140579
396 Ga0207705_10507402
397 Ga0207707_10001959
398 Ga0207695_10048122
399 Ga0207693_10031724
400 Ga0207663_10134503
401 Ga0207660_10003702
402 Ga0207660_10090901
403 Ga0207657_10003938
404 Ga0207657_10330836
405 Ga0207649_10027984
406 Ga0207652_10005955
407 Ga0207694_10030464
408 Ga0207690_10208041
409 Ga0207670_10072000
410 Ga0207665_10058562
411 Ga0207661_10852289
412 Ga0207667_10014216
413 Ga0207640_10011259
414 Ga0207677_11606100
415 Ga0207639_10016574
416 Ga0207639_10138470
417 Ga0207702_10000598
418 Ga0207702_10240232
419 Ga0207674_10039718
420 Ga0207698_10168227
421 Ga0209179_1005030
422 Ga0268266_11199747
423 Ga0265330_10013121
424 Ga0265330_10121616
425 Ga0265330_10144781
426 Ga0265332_10002279
427 Ga0265332_10120997
428 Ga0265328_10197684
429 Ga0265328_10238722
430 Ga0265325_10003166
431 Ga0265340_10001325
432 Ga0265339_10181410
433 Ga0265339_10356536
434 Ga0265331_10093432
435 Ga0265316_10294466
436 Ga0265313_10197500
437 Ga0307508_10244074
438 Ga0265314_10029150
439 Ga0265342_10085336
440 Ga0265342_10113776
441 Ga0265342_10402198
442 Ga0307516_10009179
443 Ga0373934_0002972
444 Ga0373934_0055416
445 Ga0373934_0321332
446 Ga0373944_0003971
447 Ga0373923_0000233
448 Ga0373923_0005658
449 Ga0373923_0039458
450 Ga0373936_0001469
451 Ga0373936_0117284
452 Ga0373936_0357603
453 Ga0373945_0002037
454 Ga0373953_0000315
455 Ga0373953_0008225
456 Ga0373954_0000544
457 Ga0373954_0004902
458 Ga0373954_0046849
459 Ga0373956_0001464
460 Ga0373956_0062546
461 Ga0373957_0000132
462 Ga0373957_0028311
463 Ga0373957_0036597
464 Ga0373943_0001467
465 Ga0373955_0001029
466 Ga0373955_0013026
467 Ga0373924_0002229
468 Ga0373924_0011711
469 Ga0373924_0014344
470 Ga0373931_0674724
471 Ga0373935_0004769
472 Ga0373927_0001771
473 Ga0373927_0040695
474 Ga0373933_0000915
475 Ga0373933_0004346
476 Ga0373933_0022318
477 Ga0373933_0050022
478 Ga0373947_0011828
479 Ga0373947_0600075
480 Ga0373937_0022362
481 Ga0373937_0072627
482 Ga0373925_0082677
483 Ga0373925_0111509
484 Ga0436360_0774012
485 Ga0436361_0635446
486 Ga0495592_0002799
487 Ga0495592_0167217
488 Ga0495592_0178975
489 Ga0495603_0001520
490 Ga0495629_0001273
491 Ga0495629_0083952
492 Ga0495641_0008010
493 Ga0495651_0001500
494 Ga0495651_0032471
495 Ga0495651_0062204
496 Ga0495653_0007568
497 Ga0495653_0125172
498 Ga0495580_0003905
499 Ga0495582_0001297
500 Ga0495605_0129493
501 Ga0495639_0002755
502 Ga0495662_0285992
503 Ga0495664_0011287
504 Ga0495664_0056481
505 Ga0495584_0005618
506 Ga0495585_0006845
507 Ga0495594_0031760
508 Ga0495607_0026167
509 Ga0495583_0350245
510 Ga0495606_0003013
511 Ga0495608_0001214
512 Ga0495608_0026708
513 Ga0495608_0137529
514 Ga0495618_0030915
515 Ga0495618_0055718
516 Ga0495618_0064780
517 Ga0495628_0022913
518 Ga0495630_0020908
519 Ga0495631_0419598
520 Ga0495637_0370440
521 Ga0495644_0002157
522 Ga0495648_0190572
523 Ga0495666_0076943
524 Ga0495652_0003248
525 Ga0495652_0102064
526 Ga0495652_0289974
527 Ga0495665_0003475
528 Ga0495640_0010798
529 Ga0495640_0036276
530 Ga0495586_0049979
531 Ga0495587_0038358
532 Ga0495587_0047714
533 Ga0495609_0260276
534 Ga0495621_0091624
535 Ga0495645_0013653
536 Ga0495645_0167290
537 Ga0495633_0011218
538 Ga0495667_0000340
539 Ga0495667_0002885
540 Ga0495667_0021465
541 Ga0495656_0014672
542 Ga0495634_0003624
543 Ga0495634_0038378
544 Ga0495634_0041372
545 Ga0495611_0015431
546 Ga0495635_0000220
547 Ga0495635_0001534
548 Ga0495635_0091250
549 Ga0495659_0005361
550 Ga0495661_0043091
551 Ga0495657_0007062
552 Ga0495657_0051230
553 Ga0495599_0004396
554 Ga0495599_0031445
555 Ga0495623_0040283
556 Ga0495623_0071840
557 Ga0495646_0026782
558 Ga0495646_0145163
559 Ga0495647_0000331
560 Ga0495658_0003454
561 Ga0495658_0040893
562 Ga0495613_0006218
563 Ga0495613_0024162
564 Ga0495613_0598704
565 Ga0495624_0007403
566 Ga0495670_0003105
567 Ga0495589_0069524
568 Ga0495600_0000811
569 Ga0495600_0019043
570 Ga0495581_0001710
571 Ga0495604_0000980
572 Ga0495604_0135453
573 Ga0495674_0014594
574 Ga0495674_0016715
575 Ga0495674_0041687
576 Ga0495672_0037759
577 Ga0495672_0053511
578 Ga0495676_0011536
579 Ga0495680_0001491
580 Ga0495680_0003737
581 Ga0495675_0039158
582 Ga0495675_0091328
583 Ga0495675_0245237
584 Ga0495684_0000133
585 Ga0495684_0000711
586 Ga0495593_0000309
587 Ga0495593_0001898
588 Ga0495602_0006150
589 Ga0495602_0130307
590 Ga0495602_0317808
591 Ga0495614_0005239
592 Ga0496100_0050556
593 Ga0496100_0051961
594 Ga0496101_0075387
595 Ga0496101_0264739
596 Ga0496101_0422614
597 Ga0496102_0011382
598 Ga0496104_0001919
599 Ga0496105_0037424
600 Ga0496105_0349556
601 Ga0496106_0004282
602 Ga0496107_0049340
603 Ga0496108_0000442
604 Ga0496108_0029184
605 Ga0496109_0000904
606 Ga0496109_0179326
607 Ga0496110_0004772
608 Ga0496110_0108266
609 Ga0496110_0466019
610 Ga0496111_0332788
611 Ga0496112_0000051
612 Ga0496112_0004605
613 Ga0496112_0189409
614 Ga0496112_0460043
615 Ga0496113_0026376
616 Ga0496113_0272140
617 Ga0496113_0688906
618 Ga0496114_0394244
619 Ga0496115_0014423
620 Ga0496115_0099839
621 Ga0496115_0313189
622 Ga0496118_0168157
623 Ga0496119_0079376
624 Ga0496121_0007720
625 Ga0501067_0319875
626 Ga0501069_0140809
627 nmdc:mga03683_40913_c1
628 nmdc:mga0k408_159307_c1
629 nmdc:mga0k408_381874_c1
630 nmdc:mga04h51_357411_c1
631 nmdc:mga07m45_186849_c1
632 nmdc:mga0n895_1357538_c1
633 Ga0495601_0010269
634 Ga0495601_0166472
635 Ga0495601_0341958
636 Ga0495612_0044798
637 Ga0495612_0101125
638 Ga0495595_0002222
639 Ga0495595_0004894
640 Ga0495595_0025907
641 Ga0495619_0000997
642 Ga0495619_0006451
643 Ga0495619_0020200
644 Ga0500651_0003688
645 Ga0500566_0150560
646 Ga0500595_011877
647 Ga0500595_021554
648 Ga0500642_0011132
649 Ga0500559_0001674
650 Ga0500604_0168833
651 Ga0500627_0017905
652 2513698134
653 2728749268
654 2874608594

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07475

Hpr_kinase_C

HPr Serine kinase C-terminal domain

9

167

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x8a-assembly1.cif.gz_B crystal structure of atp bound thymidylate kinase from thermus thermophilus hb8 0.8907 23 45
5xal-assembly1.cif.gz_A y99f mutant of thermus thermophilus hb8 thymidylate kinase 0.8824 23 45
5x8k-assembly1.cif.gz_A v158t mutant of thermus thermophilus hb8 thymidylate kinase 0.8796 23 45
5x8v-assembly1.cif.gz_A y92h mutant of thermus thermophilus hb8 thymidylate kinase 0.8678 23 45
5x7j-assembly1.cif.gz_A crystal structure of thymidylate kinase from thermus thermophilus hb8 0.8582 23 45
ID Description Score Start End Superfamily
af_Q10DY0_3_261_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8285 21 48 3.40.50.300
af_Q8IDK1_6_231_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8171 23 46 3.40.50.300
af_P96394_152_310_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8131 21 43 3.40.50.300
3tqfB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.784 6 148 3.40.50.300
4loaA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7796 21 40 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A329P438-F1-model_v4 deleted 0.9696 7 102
AF-A0A258WTP8-F1-model_v4 Serine kinase 0.9517 7 103 GO:0000155
GO:0005524
GO:0006109
AF-A0A439KNG7-F1-model_v4 HPr kinase/phosphorylase 0.9494 7 103 GO:0000155
GO:0005524
GO:0006109
AF-A0A7W6SQG8-F1-model_v4 Serine kinase of HPr protein (Carbohydrate metabolism regulator) 0.9286 9 147 GO:0000155
GO:0005524
GO:0006109
AF-A0A2S6TDW7-F1-model_v4 HPr kinase/phosphorylase (EC 2.7.11.-) 0.925 7 111 GO:0000155
GO:0005524
GO:0006109

Map