F408728

General Info

Members Datasets Scaffolds Average Seq Length
327 198 654 393

Family's Representative Sequence

Representative Sequence 3300006173|Ga0070716_100000015|Ga0070716_10000001552
Length 440
Sequence MPPSDFIVFGAPAIEQDEIDEVVRCLDSGWIGTGPRVARFEKEFAAYQQQPFAAAVSSCTAAMHLSVLAAGIGEGDEVITTPLTFCATVNAIVHAGATPVLADVDPRTMNIDPAEVEARITRNTKAILPVHFAGRPADMDALTDIAARHGLKLIEDCAHAIETEYHGRKAGAFGDFGCFSFYATKNVTTGEGGMILTRDEEDLARIKILALHGMSKDAWKRFSDEGYKHYFVVETGFKYNMMDLQAALGIHQLRRVESNWRRREKIWQQYNEAFADLPVTLPAEPEPDTRHAYHLYTILIDEALALVSRDEFLEAMTANEIGVGVHYLSVPEHPVYQDKFGWRPADYPNAMRIGRQTVSLPLSAKLTDAEVSRVIDAVRMVIRGKGKALKAKREMQRAESTKQDPAALPLPPGALRSGKEQGATTEERGACGQPLSALRT

Samples

Sample ID Description Type Environment
1 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
52 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
53 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
54 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
61 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
68 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
115 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
118 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
119 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
120 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
121 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
122 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
123 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
124 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
125 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
126 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
129 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
130 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
131 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
132 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
133 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
134 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
135 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
136 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
137 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
140 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
141 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
142 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
143 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
146 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
147 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
148 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
149 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
150 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
151 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
152 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
153 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
154 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
164 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
165 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
166 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
167 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
179 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
182 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
183 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
189 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
192 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
193 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
196 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
197 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
198 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.78
Metatranscriptomes 0.31
Isolates 0.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.45
Nodule 0
Rhizoplane 4.28
Rhizosphere 90.83
Stem 0
Stem Tuber 0
Unclassified 1.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070716_100000015 3300006173 Bacteria 92287
2 SwRhRL2b_contig_1410020 2162886007 Bacteria 14338
3 JGI24034J26672_10000009 3300002239 Bacteria 160533
4 JGI24034J26672_10000029 3300002239 Bacteria 101926
5 rootH1_10076510 3300003323 Bacteria 4209
6 Ga0065704_10070632 3300005289 Bacteria 18862
7 Ga0065715_10001437 3300005293 Bacteria 6686
8 Ga0065707_10092271 3300005295 Bacteria 3795
9 Ga0065707_10129531 3300005295 Archaea 1934
10 Ga0070683_100001079 3300005329 Bacteria 20507
11 Ga0070683_100011745 3300005329 Bacteria 7583
12 Ga0070670_100004826 3300005331 Bacteria 11329
13 Ga0070670_100040895 3300005331 Bacteria 3984
14 Ga0068869_100059232 3300005334 Bacteria 2803
15 Ga0070666_10005672 3300005335 Bacteria 7665
16 Ga0070680_100003417 3300005336 Bacteria 11847
17 Ga0070680_100024874 3300005336 Bacteria 4786
18 Ga0070680_100101546 3300005336 Bacteria 2388
19 Ga0070682_100000137 3300005337 Bacteria 59853
20 Ga0070682_100194870 3300005337 Bacteria 1425
21 Ga0070691_10040162 3300005341 Bacteria 2211
22 Ga0070669_100004944 3300005353 Bacteria 9631
23 Ga0070675_100195281 3300005354 Bacteria 1755
24 Ga0070659_100044862 3300005366 Bacteria 3462
25 Ga0070667_100058178 3300005367 Bacteria 3268
26 Ga0070667_100060278 3300005367 Bacteria 3211
27 Ga0070703_10000009 3300005406 Bacteria 96690
28 Ga0070714_100099160 3300005435 Bacteria 2563
29 Ga0070701_10053508 3300005438 Bacteria 2101
30 Ga0070700_100031841 3300005441 Unclassified 3164
31 Ga0070708_100026338 3300005445 Bacteria 4976
32 Ga0070708_100082664 3300005445 Bacteria 2909
33 Ga0070708_100101553 3300005445 Bacteria 2634
34 Ga0070663_100067409 3300005455 Bacteria 2596
35 Ga0070662_100150882 3300005457 Unclassified 1809
36 Ga0070681_10000686 3300005458 Bacteria 28039
37 Ga0070681_10000873 3300005458 Bacteria 25406
38 Ga0070681_10001507 3300005458 Bacteria 20623
39 Ga0070681_10004912 3300005458 Bacteria 12835
40 Ga0070681_10006564 3300005458 Bacteria 11326
41 Ga0070681_10165836 3300005458 Bacteria 2132
42 Ga0070706_100001103 3300005467 Bacteria 29219
43 Ga0070706_100013708 3300005467 Bacteria 7496
44 Ga0070706_100015537 3300005467 Bacteria 7032
45 Ga0070706_100027247 3300005467 Bacteria 5259
46 Ga0070706_100035400 3300005467 Bacteria 4611
47 Ga0070707_100000500 3300005468 Bacteria 38934
48 Ga0070707_100006221 3300005468 Bacteria 11114
49 Ga0070707_100011017 3300005468 Bacteria 8421
50 Ga0070698_100000634 3300005471 Bacteria 37860
51 Ga0070698_100003632 3300005471 Bacteria 16949
52 Ga0070698_100014959 3300005471 Bacteria 8203
53 Ga0070698_100040668 3300005471 Bacteria 4776
54 Ga0070698_100117103 3300005471 Bacteria 2626
55 Ga0070699_100027004 3300005518 Bacteria 4951
56 Ga0070699_100039537 3300005518 Bacteria 4083
57 Ga0070679_100001572 3300005530 Bacteria 20450
58 Ga0070679_100004495 3300005530 Bacteria 12887
59 Ga0070679_100028631 3300005530 Bacteria 5494
60 Ga0070679_100059486 3300005530 Bacteria 3808
61 Ga0070679_100067591 3300005530 Bacteria 3564
62 Ga0070684_100020050 3300005535 Bacteria 5543
63 Ga0070697_100001989 3300005536 Bacteria 15654
64 Ga0070697_100048524 3300005536 Bacteria 3443
65 Ga0070697_100070207 3300005536 Bacteria 2871
66 Ga0068853_100001316 3300005539 Bacteria 17845
67 Ga0068853_100004003 3300005539 Bacteria 11331
68 Ga0070695_100116610 3300005545 Bacteria 1821
69 Ga0070696_100010261 3300005546 Bacteria 6269
70 Ga0070696_100217071 3300005546 Bacteria 1433
71 Ga0070665_100001241 3300005548 Bacteria 30925
72 Ga0070665_100014387 3300005548 Bacteria 7940
73 Ga0070704_100046925 3300005549 Bacteria 3016
74 Ga0068855_100000985 3300005563 Bacteria 35490
75 Ga0068855_100009655 3300005563 Bacteria 11645
76 Ga0068855_100012335 3300005563 Bacteria 10323
77 Ga0068855_100502513 3300005563 Bacteria 1317
78 Ga0068854_100054041 3300005578 Bacteria 2887
79 Ga0070702_100111406 3300005615 Bacteria 1697
80 Ga0068852_100296570 3300005616 Bacteria 1563
81 Ga0068859_100007018 3300005617 Bacteria 11435
82 Ga0068859_100054972 3300005617 Bacteria 4005
83 Ga0068864_100000035 3300005618 Bacteria 195218
84 Ga0068864_100014241 3300005618 Bacteria 6604
85 Ga0068861_100128447 3300005719 Bacteria 2054
86 Ga0068858_100000085 3300005842 Bacteria 97757
87 Ga0068860_100069855 3300005843 Bacteria 3339
88 Ga0081455_10094822 3300005937 Unclassified 2410
89 Ga0081539_10057322 3300005985 Bacteria 2156
90 Ga0070717_10024773 3300006028 Bacteria 4768
91 Ga0075363_100002000 3300006048 Bacteria 8121
92 Ga0070715_10000037 3300006163 Bacteria 71762
93 Ga0070716_100008022 3300006173 Bacteria 5228
94 Ga0075366_10006953 3300006195 Bacteria 6230
95 Ga0075370_10016222 3300006353 Bacteria 4005
96 Ga0068871_100129689 3300006358 Bacteria 2137
97 Ga0075428_100175983 3300006844 Bacteria 2317
98 Ga0075431_100043212 3300006847 Bacteria 4651
99 Ga0075433_10093349 3300006852 Bacteria 2662
100 Ga0075433_10094020 3300006852 Bacteria 2653
101 Ga0075434_100015316 3300006871 Bacteria 7350
102 Ga0075434_100064681 3300006871 Bacteria 3642
103 Ga0075429_100180983 3300006880 Bacteria 1847
104 Ga0075436_100002203 3300006914 Bacteria 13455
105 Ga0075436_100057647 3300006914 Bacteria 2682
106 Ga0097620_100007018 3300006931 Bacteria 11435
107 Ga0097620_100054973 3300006931 Bacteria 4005
108 Ga0075435_100049111 3300007076 Bacteria 3392
109 Ga0099794_10029214 3300007265 Bacteria 2568
110 Ga0105240_10006419 3300009093 Bacteria 17284
111 Ga0105240_10006810 3300009093 Bacteria 16710
112 Ga0105240_10007909 3300009093 Bacteria 15336
113 Ga0105240_10070605 3300009093 Bacteria 4320
114 Ga0105240_10429335 3300009093 Bacteria 1483
115 Ga0111539_10003477 3300009094 Bacteria 20747
116 Ga0111539_10014536 3300009094 Bacteria 9830
117 Ga0111539_10151881 3300009094 Bacteria 2710
118 Ga0105245_10052546 3300009098 Bacteria 3654
119 Ga0105245_10102429 3300009098 Bacteria 2651
120 Ga0105247_10000039 3300009101 Bacteria 160675
121 Ga0114129_10209057 3300009147 Bacteria 2639
122 Ga0114129_10746657 3300009147 Bacteria 1253
123 Ga0105248_10033883 3300009177 Bacteria 5706
124 Ga0105238_10013467 3300009551 Bacteria 8255
125 Ga0105239_10002050 3300010375 Bacteria 26140
126 Ga0157373_10002134 3300013100 Bacteria 14972
127 Ga0157373_10023472 3300013100 Bacteria 4470
128 Ga0157370_10004883 3300013104 Bacteria 15211
129 Ga0157370_10008131 3300013104 Bacteria 11349
130 Ga0157370_10031304 3300013104 Bacteria 5206
131 Ga0157369_10013652 3300013105 Bacteria 9187
132 Ga0157374_10091931 3300013296 Bacteria 2894
133 Ga0163162_10025977 3300013306 Bacteria 5788
134 Ga0157372_10016031 3300013307 Bacteria 8037
135 Ga0157372_10020668 3300013307 Bacteria 7105
136 Ga0157372_10026533 3300013307 Bacteria 6304
137 Ga0157372_10034780 3300013307 Bacteria 5543
138 Ga0163163_10164348 3300014325 Bacteria 2265
139 Ga0157379_10031984 3300014968 Bacteria 4689
140 Ga0157379_10056591 3300014968 Bacteria 3503
141 Ga0157379_10086331 3300014968 Bacteria 2814
142 Ga0206353_11326887 3300020082 Bacteria 1915
143 Ga0213876_10070132 3300021384 Bacteria 1851
144 Ga0207672_1000093 3300025223 Bacteria 11911
145 Ga0207653_10000073 3300025885 Bacteria 74053
146 Ga0207710_10000001 3300025900 Bacteria 1797433
147 Ga0207685_10000035 3300025905 Bacteria 66046
148 Ga0207705_10003649 3300025909 Bacteria 11722
149 Ga0207705_10007314 3300025909 Bacteria 8120
150 Ga0207705_10192096 3300025909 Bacteria 1544
151 Ga0207684_10000984 3300025910 Bacteria 31972
152 Ga0207684_10001177 3300025910 Bacteria 29266
153 Ga0207684_10004677 3300025910 Bacteria 12853
154 Ga0207684_10009984 3300025910 Bacteria 8370
155 Ga0207684_10013782 3300025910 Bacteria 6983
156 Ga0207707_10000910 3300025912 Bacteria 28832
157 Ga0207707_10002092 3300025912 Bacteria 18057
158 Ga0207707_10009483 3300025912 Bacteria 8441
159 Ga0207707_10015600 3300025912 Bacteria 6618
160 Ga0207707_10019988 3300025912 Bacteria 5844
161 Ga0207707_10056478 3300025912 Bacteria 3415
162 Ga0207707_10296374 3300025912 Bacteria 1399
163 Ga0207695_10001165 3300025913 Bacteria 45468
164 Ga0207695_10003288 3300025913 Bacteria 22970
165 Ga0207695_10005934 3300025913 Bacteria 16007
166 Ga0207695_10011638 3300025913 Bacteria 10635
167 Ga0207695_10057003 3300025913 Bacteria 4062
168 Ga0207695_10115512 3300025913 Bacteria 2658
169 Ga0207663_10073036 3300025916 Bacteria 2219
170 Ga0207660_10002675 3300025917 Bacteria 11691
171 Ga0207660_10011312 3300025917 Bacteria 5804
172 Ga0207660_10024032 3300025917 Bacteria 4122
173 Ga0207660_10086425 3300025917 Bacteria 2315
174 Ga0207660_10107841 3300025917 Bacteria 2091
175 Ga0207657_10036401 3300025919 Bacteria 4405
176 Ga0207657_10144613 3300025919 Bacteria 1940
177 Ga0207649_10003089 3300025920 Bacteria 9139
178 Ga0207649_10093483 3300025920 Bacteria 1973
179 Ga0207652_10000714 3300025921 Bacteria 32283
180 Ga0207652_10003005 3300025921 Bacteria 14082
181 Ga0207652_10003171 3300025921 Bacteria 13693
182 Ga0207652_10017597 3300025921 Bacteria 5851
183 Ga0207652_10019737 3300025921 Bacteria 5546
184 Ga0207652_10050202 3300025921 Bacteria 3574
185 Ga0207652_10060040 3300025921 Bacteria 3280
186 Ga0207646_10000423 3300025922 Bacteria 56577
187 Ga0207646_10004689 3300025922 Bacteria 14732
188 Ga0207646_10011816 3300025922 Bacteria 8431
189 Ga0207646_10126712 3300025922 Bacteria 2296
190 Ga0207681_10011278 3300025923 Bacteria 5490
191 Ga0207694_10000394 3300025924 Bacteria 40768
192 Ga0207694_10026057 3300025924 Bacteria 4446
193 Ga0207650_10003282 3300025925 Bacteria 11144
194 Ga0207650_10008595 3300025925 Bacteria 6972
195 Ga0207690_10064857 3300025932 Bacteria 2495
196 Ga0207690_10161210 3300025932 Bacteria 1672
197 Ga0207670_10014124 3300025936 Bacteria 4730
198 Ga0207665_10000001 3300025939 Bacteria 279842
199 Ga0207665_10003960 3300025939 Bacteria 9908
200 Ga0207689_10076360 3300025942 Bacteria 2754
201 Ga0207661_10000634 3300025944 Bacteria 22605
202 Ga0207661_10083843 3300025944 Bacteria 2638
203 Ga0207667_10001035 3300025949 Bacteria 35410
204 Ga0207667_10001838 3300025949 Bacteria 26653
205 Ga0207667_10043882 3300025949 Bacteria 4742
206 Ga0207667_10050144 3300025949 Bacteria 4405
207 Ga0207640_10013080 3300025981 Bacteria 4746
208 Ga0207658_10051380 3300025986 Bacteria 3038
209 Ga0207703_10000024 3300026035 Bacteria 217968
210 Ga0207639_10000576 3300026041 Bacteria 25262
211 Ga0207639_10011848 3300026041 Bacteria 6063
212 Ga0207678_10099178 3300026067 Bacteria 2488
213 Ga0207708_10025928 3300026075 Bacteria 4434
214 Ga0207702_10039751 3300026078 Bacteria 3943
215 Ga0207676_10000026 3300026095 Bacteria 248593
216 Ga0207676_10010440 3300026095 Bacteria 6614
217 Ga0207428_10001510 3300027907 Bacteria 24335
218 Ga0268266_10000004 3300028379 Bacteria 1495817
219 Ga0268266_10001074 3300028379 Bacteria 34257
220 Ga0268266_10022831 3300028379 Bacteria 5326
221 Ga0268266_10066768 3300028379 Bacteria 3112
222 Ga0268264_10037571 3300028381 Bacteria 3993
223 Ga0268264_10164040 3300028381 Bacteria 2004
224 Ga0265319_1001974 3300028563 Bacteria 11574
225 Ga0265323_10036845 3300028653 Unclassified 1796
226 Ga0265324_10000077 3300029957 Bacteria 76391
227 Ga0265320_10000008 3300031240 Bacteria 296209
228 Ga0265339_10000044 3300031249 Bacteria 116396
229 Ga0265313_10004967 3300031595 Bacteria 9951
230 Ga0316575_10004720 3300031665 Bacteria 4804
231 Ga0373928_0007180 3300035084 Bacteria 2148
232 Ga0373932_0031038 3300035112 Bacteria 1486
233 Ga0395898_0013758 3300037466 Bacteria 8320
234 Ga0395905_0048936 3300037471 Bacteria 3961
235 Ga0400484_23183 3300038725 Bacteria 2639
236 Ga0436362_0438619 3300039453 Bacteria 2109
237 Ga0439436_0000101 3300041404 Bacteria 20278
238 Ga0439466_0002313 3300041411 Bacteria 7479
239 Ga0439465_0000076 3300041413 Bacteria 21471
240 Ga0439431_0034161 3300041997 Bacteria 1274
241 Ga0439433_0002293 3300041999 Bacteria 4047
242 Ga0439432_002217 3300042006 Bacteria 7332
243 Ga0439449_0000104 3300042007 Bacteria 27274
244 Ga0439462_0002306 3300042015 Bacteria 4418
245 Ga0451577_0000020 3300042876 Bacteria 477488
246 Ga0453683_0002303 3300044673 Bacteria 15017
247 Ga0466966_0044053 3300044684 Bacteria 2858
248 Ga0466963_0000334 3300044694 Bacteria 21414
249 Ga0453684_0000246 3300044712 Bacteria 233363
250 Ga0453684_0000683 3300044712 Bacteria 120997
251 Ga0453684_0001792 3300044712 Bacteria 57038
252 Ga0453684_0004811 3300044712 Bacteria 27778
253 Ga0453684_0019619 3300044712 Bacteria 10274
254 Ga0453684_0020729 3300044712 Bacteria 9891
255 Ga0466957_0005370 3300044842 Bacteria 7192
256 Ga0451576_0000962 3300045051 Bacteria 53878
257 Ga0451576_0274986 3300045051 Bacteria 1761
258 Ga0451576_0312142 3300045051 Bacteria 1645
259 Ga0466958_0000971 3300045836 Bacteria 12931
260 Ga0466967_0006731 3300045976 Bacteria 8178
261 Ga0495629_0244302 3300046459 Bacteria 1236
262 Ga0495638_0066103 3300046460 Bacteria 2223
263 Ga0495610_0056875 3300046512 Bacteria 1879
264 Ga0495643_0000279 3300046522 Bacteria 73281
265 Ga0495663_0001899 3300046525 Bacteria 6427
266 Ga0495598_0000169 3300046537 Bacteria 11196
267 Ga0495621_0000333 3300046539 Bacteria 11480
268 Ga0495636_0002015 3300047318 Bacteria 7785
269 Ga0496102_0001913 3300048905 Bacteria 17911
270 Ga0496104_0001146 3300048907 Bacteria 22682
271 Ga0496104_0047380 3300048907 Bacteria 4051
272 Ga0496105_0028431 3300048908 Bacteria 4571
273 Ga0496108_0001195 3300048911 Bacteria 20324
274 Ga0496108_0027790 3300048911 Bacteria 4676
275 Ga0496109_0010229 3300048912 Bacteria 8011
276 Ga0496110_0010515 3300048913 Bacteria 7533
277 Ga0496110_0049603 3300048913 Bacteria 3683
278 Ga0496111_0011186 3300048914 Bacteria 6040
279 Ga0496112_0002488 3300048915 Bacteria 14875
280 Ga0496112_0033782 3300048915 Bacteria 4974
281 Ga0496113_0003376 3300048916 Bacteria 9544
282 Ga0496113_0045256 3300048916 Bacteria 3263
283 Ga0496117_0002254 3300048920 Bacteria 24898
284 Ga0496118_0008357 3300048921 Bacteria 10712
285 Ga0496119_0004378 3300048922 Bacteria 14091
286 Ga0496120_0000101 3300048923 Bacteria 142982
287 Ga0496124_0000617 3300048927 Bacteria 59704
288 Ga0501047_0009826 3300049581 Bacteria 9041
289 Ga0501067_0004741 3300049583 Bacteria 7530
290 Ga0501068_0004419 3300049584 Bacteria 7647
291 Ga0501070_0068314 3300049586 Bacteria 2942
292 Ga0501072_0000001 3300049588 Bacteria 362697
293 Ga0501073_0048301 3300049589 Bacteria 2987
294 Ga0501074_0004863 3300049590 Bacteria 9635
295 Ga0501076_0005079 3300049592 Bacteria 9421
296 Ga0501077_0012116 3300049593 Bacteria 5399
297 Ga0501079_0032074 3300049741 Bacteria 4038
298 Ga0501080_0086399 3300049742 Bacteria 2914
299 Ga0501083_0021713 3300049744 Bacteria 4459
300 nmdc:mga03683_29752_c1 3300050489 Bacteria 2180
301 nmdc:mga0k408_15152_c1 3300050493 Bacteria 4261
302 nmdc:mga07m45_6298_c1 3300050496 Bacteria 5994
303 nmdc:mga05p37_1136_c1 3300050507 Bacteria 30577
304 nmdc:mga05p37_180641_c1 3300050507 Bacteria 2567
305 nmdc:mga09592_101584_c1 3300050508 Bacteria 2463
306 nmdc:mga08y16_182093_c1 3300050511 Bacteria 2181
307 nmdc:mga08y16_3763_c1 3300050511 Bacteria 15791
308 nmdc:mga0n895_12014_c1 3300050512 Bacteria 7750
309 nmdc:mga0n895_59377_c1 3300050512 Bacteria 3773
310 nmdc:mga0n895_80288_c1 3300050512 Bacteria 3250
311 nmdc:mga0rr50_239965_c1 3300050513 Bacteria 1502
312 nmdc:mga0rr50_43341_c1 3300050513 Bacteria 3292
313 nmdc:mga08x19_228006_c1 3300050514 Bacteria 1282
314 nmdc:mga08x19_38094_c1 3300050514 Bacteria 3053
315 nmdc:mga08x19_3959_c1 3300050514 Bacteria 8818
316 nmdc:mga0a205_111393_c1 3300050515 Bacteria 2636
317 nmdc:mga0a205_133442_c1 3300050515 Bacteria 2383
318 nmdc:mga0a205_99522_c1 3300050515 Bacteria 2806
319 Ga0500616_0093671 3300053153 Unclassified 1482
320 Ga0500636_0014909 3300053177 Bacteria 4577
321 Ga0501084_0000499 3300054114 Bacteria 30056
322 Ga0501084_0050115 3300054114 Bacteria 3495
323 Ga0501082_0151616 3300060353 Bacteria 2013
324 Ga0530510_0080165 3300061734 Bacteria 2375
325 2676475818 2675903058 Bacteria 6822861
326 2827630379 2827628540 Bacteria 6858585
327 2885192534 2885192300 Bacteria 5882526
328 Ga0070716_100000015
329 SwRhRL2b_contig_1410020
330 JGI24034J26672_10000009
331 JGI24034J26672_10000029
332 rootH1_10076510
333 Ga0065704_10070632
334 Ga0065715_10001437
335 Ga0065707_10092271
336 Ga0065707_10129531
337 Ga0070683_100001079
338 Ga0070683_100011745
339 Ga0070670_100004826
340 Ga0070670_100040895
341 Ga0068869_100059232
342 Ga0070666_10005672
343 Ga0070680_100003417
344 Ga0070680_100024874
345 Ga0070680_100101546
346 Ga0070682_100000137
347 Ga0070682_100194870
348 Ga0070691_10040162
349 Ga0070669_100004944
350 Ga0070675_100195281
351 Ga0070659_100044862
352 Ga0070667_100058178
353 Ga0070667_100060278
354 Ga0070703_10000009
355 Ga0070714_100099160
356 Ga0070701_10053508
357 Ga0070700_100031841
358 Ga0070708_100026338
359 Ga0070708_100082664
360 Ga0070708_100101553
361 Ga0070663_100067409
362 Ga0070662_100150882
363 Ga0070681_10000686
364 Ga0070681_10000873
365 Ga0070681_10001507
366 Ga0070681_10004912
367 Ga0070681_10006564
368 Ga0070681_10165836
369 Ga0070706_100001103
370 Ga0070706_100013708
371 Ga0070706_100015537
372 Ga0070706_100027247
373 Ga0070706_100035400
374 Ga0070707_100000500
375 Ga0070707_100006221
376 Ga0070707_100011017
377 Ga0070698_100000634
378 Ga0070698_100003632
379 Ga0070698_100014959
380 Ga0070698_100040668
381 Ga0070698_100117103
382 Ga0070699_100027004
383 Ga0070699_100039537
384 Ga0070679_100001572
385 Ga0070679_100004495
386 Ga0070679_100028631
387 Ga0070679_100059486
388 Ga0070679_100067591
389 Ga0070684_100020050
390 Ga0070697_100001989
391 Ga0070697_100048524
392 Ga0070697_100070207
393 Ga0068853_100001316
394 Ga0068853_100004003
395 Ga0070695_100116610
396 Ga0070696_100010261
397 Ga0070696_100217071
398 Ga0070665_100001241
399 Ga0070665_100014387
400 Ga0070704_100046925
401 Ga0068855_100000985
402 Ga0068855_100009655
403 Ga0068855_100012335
404 Ga0068855_100502513
405 Ga0068854_100054041
406 Ga0070702_100111406
407 Ga0068852_100296570
408 Ga0068859_100007018
409 Ga0068859_100054972
410 Ga0068864_100000035
411 Ga0068864_100014241
412 Ga0068861_100128447
413 Ga0068858_100000085
414 Ga0068860_100069855
415 Ga0081455_10094822
416 Ga0081539_10057322
417 Ga0070717_10024773
418 Ga0075363_100002000
419 Ga0070715_10000037
420 Ga0070716_100008022
421 Ga0075366_10006953
422 Ga0075370_10016222
423 Ga0068871_100129689
424 Ga0075428_100175983
425 Ga0075431_100043212
426 Ga0075433_10093349
427 Ga0075433_10094020
428 Ga0075434_100015316
429 Ga0075434_100064681
430 Ga0075429_100180983
431 Ga0075436_100002203
432 Ga0075436_100057647
433 Ga0097620_100007018
434 Ga0097620_100054973
435 Ga0075435_100049111
436 Ga0099794_10029214
437 Ga0105240_10006419
438 Ga0105240_10006810
439 Ga0105240_10007909
440 Ga0105240_10070605
441 Ga0105240_10429335
442 Ga0111539_10003477
443 Ga0111539_10014536
444 Ga0111539_10151881
445 Ga0105245_10052546
446 Ga0105245_10102429
447 Ga0105247_10000039
448 Ga0114129_10209057
449 Ga0114129_10746657
450 Ga0105248_10033883
451 Ga0105238_10013467
452 Ga0105239_10002050
453 Ga0157373_10002134
454 Ga0157373_10023472
455 Ga0157370_10004883
456 Ga0157370_10008131
457 Ga0157370_10031304
458 Ga0157369_10013652
459 Ga0157374_10091931
460 Ga0163162_10025977
461 Ga0157372_10016031
462 Ga0157372_10020668
463 Ga0157372_10026533
464 Ga0157372_10034780
465 Ga0163163_10164348
466 Ga0157379_10031984
467 Ga0157379_10056591
468 Ga0157379_10086331
469 Ga0206353_11326887
470 Ga0213876_10070132
471 Ga0207672_1000093
472 Ga0207653_10000073
473 Ga0207710_10000001
474 Ga0207685_10000035
475 Ga0207705_10003649
476 Ga0207705_10007314
477 Ga0207705_10192096
478 Ga0207684_10000984
479 Ga0207684_10001177
480 Ga0207684_10004677
481 Ga0207684_10009984
482 Ga0207684_10013782
483 Ga0207707_10000910
484 Ga0207707_10002092
485 Ga0207707_10009483
486 Ga0207707_10015600
487 Ga0207707_10019988
488 Ga0207707_10056478
489 Ga0207707_10296374
490 Ga0207695_10001165
491 Ga0207695_10003288
492 Ga0207695_10005934
493 Ga0207695_10011638
494 Ga0207695_10057003
495 Ga0207695_10115512
496 Ga0207663_10073036
497 Ga0207660_10002675
498 Ga0207660_10011312
499 Ga0207660_10024032
500 Ga0207660_10086425
501 Ga0207660_10107841
502 Ga0207657_10036401
503 Ga0207657_10144613
504 Ga0207649_10003089
505 Ga0207649_10093483
506 Ga0207652_10000714
507 Ga0207652_10003005
508 Ga0207652_10003171
509 Ga0207652_10017597
510 Ga0207652_10019737
511 Ga0207652_10050202
512 Ga0207652_10060040
513 Ga0207646_10000423
514 Ga0207646_10004689
515 Ga0207646_10011816
516 Ga0207646_10126712
517 Ga0207681_10011278
518 Ga0207694_10000394
519 Ga0207694_10026057
520 Ga0207650_10003282
521 Ga0207650_10008595
522 Ga0207690_10064857
523 Ga0207690_10161210
524 Ga0207670_10014124
525 Ga0207665_10000001
526 Ga0207665_10003960
527 Ga0207689_10076360
528 Ga0207661_10000634
529 Ga0207661_10083843
530 Ga0207667_10001035
531 Ga0207667_10001838
532 Ga0207667_10043882
533 Ga0207667_10050144
534 Ga0207640_10013080
535 Ga0207658_10051380
536 Ga0207703_10000024
537 Ga0207639_10000576
538 Ga0207639_10011848
539 Ga0207678_10099178
540 Ga0207708_10025928
541 Ga0207702_10039751
542 Ga0207676_10000026
543 Ga0207676_10010440
544 Ga0207428_10001510
545 Ga0268266_10000004
546 Ga0268266_10001074
547 Ga0268266_10022831
548 Ga0268266_10066768
549 Ga0268264_10037571
550 Ga0268264_10164040
551 Ga0265319_1001974
552 Ga0265323_10036845
553 Ga0265324_10000077
554 Ga0265320_10000008
555 Ga0265339_10000044
556 Ga0265313_10004967
557 Ga0316575_10004720
558 Ga0373928_0007180
559 Ga0373932_0031038
560 Ga0395898_0013758
561 Ga0395905_0048936
562 Ga0400484_23183
563 Ga0436362_0438619
564 Ga0439436_0000101
565 Ga0439466_0002313
566 Ga0439465_0000076
567 Ga0439431_0034161
568 Ga0439433_0002293
569 Ga0439432_002217
570 Ga0439449_0000104
571 Ga0439462_0002306
572 Ga0451577_0000020
573 Ga0453683_0002303
574 Ga0466966_0044053
575 Ga0466963_0000334
576 Ga0453684_0000246
577 Ga0453684_0000683
578 Ga0453684_0001792
579 Ga0453684_0004811
580 Ga0453684_0019619
581 Ga0453684_0020729
582 Ga0466957_0005370
583 Ga0451576_0000962
584 Ga0451576_0274986
585 Ga0451576_0312142
586 Ga0466958_0000971
587 Ga0466967_0006731
588 Ga0495629_0244302
589 Ga0495638_0066103
590 Ga0495610_0056875
591 Ga0495643_0000279
592 Ga0495663_0001899
593 Ga0495598_0000169
594 Ga0495621_0000333
595 Ga0495636_0002015
596 Ga0496102_0001913
597 Ga0496104_0001146
598 Ga0496104_0047380
599 Ga0496105_0028431
600 Ga0496108_0001195
601 Ga0496108_0027790
602 Ga0496109_0010229
603 Ga0496110_0010515
604 Ga0496110_0049603
605 Ga0496111_0011186
606 Ga0496112_0002488
607 Ga0496112_0033782
608 Ga0496113_0003376
609 Ga0496113_0045256
610 Ga0496117_0002254
611 Ga0496118_0008357
612 Ga0496119_0004378
613 Ga0496120_0000101
614 Ga0496124_0000617
615 Ga0501047_0009826
616 Ga0501067_0004741
617 Ga0501068_0004419
618 Ga0501070_0068314
619 Ga0501072_0000001
620 Ga0501073_0048301
621 Ga0501074_0004863
622 Ga0501076_0005079
623 Ga0501077_0012116
624 Ga0501079_0032074
625 Ga0501080_0086399
626 Ga0501083_0021713
627 nmdc:mga03683_29752_c1
628 nmdc:mga0k408_15152_c1
629 nmdc:mga07m45_6298_c1
630 nmdc:mga05p37_1136_c1
631 nmdc:mga05p37_180641_c1
632 nmdc:mga09592_101584_c1
633 nmdc:mga08y16_182093_c1
634 nmdc:mga08y16_3763_c1
635 nmdc:mga0n895_12014_c1
636 nmdc:mga0n895_59377_c1
637 nmdc:mga0n895_80288_c1
638 nmdc:mga0rr50_239965_c1
639 nmdc:mga0rr50_43341_c1
640 nmdc:mga08x19_228006_c1
641 nmdc:mga08x19_38094_c1
642 nmdc:mga08x19_3959_c1
643 nmdc:mga0a205_111393_c1
644 nmdc:mga0a205_133442_c1
645 nmdc:mga0a205_99522_c1
646 Ga0500616_0093671
647 Ga0500636_0014909
648 Ga0501084_0000499
649 Ga0501084_0050115
650 Ga0501082_0151616
651 Ga0530510_0080165
652 2676475818
653 2827630379
654 2885192534

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

12

379

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1mdo-assembly1.cif.gz_A crystal structure of arnb aminotransferase with pyridomine 5' phosphate 0.9715 6 386
8su6-assembly1.cif.gz_B crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form2) 0.9692 6 384
1mdo-assembly1.cif.gz_A crystal structure of arnb aminotransferase with pyridomine 5' phosphate 0.9689 6 386
8snj-assembly3.cif.gz_E crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form) 0.9675 6 384
1mdx-assembly1.cif.gz_A crystal structure of arnb transferase with pyridoxal 5' phosphate 0.9654 6 386
ID Description Score Start End Superfamily
3bn1B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9689 8 258 3.40.640.10
af_Q58466_2_255_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9689 5 257 3.40.640.10
4lc3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9636 5 257 3.40.640.10
4lc3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9559 5 257 3.40.640.10
af_Q58466_257_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9547 262 385 3.90.1150.10
ID Description Score Start End GO Terms
AF-X1L4U2-F1-model_v4 Aminotransferase class I/classII domain-containing protein 0.9918 121 202 GO:0000271
GO:0008483
GO:0030170
AF-A0A349NWH6-F1-model_v4 deleted 0.9888 78 202
AF-A0A3D4E1S7-F1-model_v4 deleted 0.9875 78 185
AF-X1S2V2-F1-model_v4 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.9854 78 218 GO:0000271
GO:0008483
GO:0030170
AF-A0A7C2G448-F1-model_v4 DegT/DnrJ/EryC1/StrS family aminotransferase 0.9825 80 196 GO:0000271
GO:0008483
GO:0030170

Map