F408402

General Info

Members Datasets Scaffolds Average Seq Length
326 178 652 175

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100936990|Ga0307409_1009369902
Length 198
Sequence MPEAGAPRLRSERRLSLCKGIFLLADIAGLERLIEPEVKHLGYDLVRVAMVGGTSDPTLQVMAERSDTRQLDIADCERISRRLSEMLDLADPIAGSYRLEVSSPGIDRPLTRLEDYKDWAGHEARIILAEPHDGRKNFSGTLQGVERQQVLVLTKDGEAHALPFSEIASAKLLLTDKLIAATAPLTTEGADIIETAEE

Samples

Sample ID Description Type Environment
1 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
76 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
131 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
132 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
133 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
134 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
135 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
136 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
137 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
138 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
139 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
142 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
143 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
162 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
163 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
164 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
165 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
174 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
175 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
176 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
177 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
178 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.16
Metatranscriptomes 0.61
Isolates 1.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 2.76
Rhizosphere 93.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307409_100936990 3300031995 Bacteria 881
2 JGI24740J21852_10010774 3300001979 Bacteria 3502
3 JGI24740J21852_10068122 3300001979 Bacteria 961
4 JGI24749J21850_1000060 3300002076 Bacteria 20078
5 JGI24751J29686_10000034 3300002459 Bacteria 86962
6 Ga0065707_10125895 3300005295 Bacteria 2014
7 Ga0070658_10301973 3300005327 Bacteria 1365
8 Ga0070658_10784877 3300005327 Bacteria 827
9 Ga0070683_100016190 3300005329 Bacteria 6568
10 Ga0070670_100000033 3300005331 Bacteria 158509
11 Ga0070670_100001163 3300005331 Bacteria 20894
12 Ga0068869_100190230 3300005334 Bacteria 1613
13 Ga0070666_10247290 3300005335 Bacteria 1262
14 Ga0070680_100000964 3300005336 Bacteria 20348
15 Ga0070680_100264205 3300005336 Bacteria 1456
16 Ga0070680_100297022 3300005336 Bacteria 1369
17 Ga0068868_100680229 3300005338 Bacteria 919
18 Ga0070660_100016556 3300005339 Bacteria 5352
19 Ga0070660_100128455 3300005339 Bacteria 2027
20 Ga0070660_100148540 3300005339 Bacteria 1884
21 Ga0070660_100336097 3300005339 Bacteria 1242
22 Ga0070660_100595176 3300005339 Bacteria 924
23 Ga0070661_100157299 3300005344 Bacteria 1720
24 Ga0070661_100338107 3300005344 Bacteria 1179
25 Ga0070692_10122323 3300005345 Bacteria 1453
26 Ga0070692_10136094 3300005345 Bacteria 1386
27 Ga0070692_10345678 3300005345 Bacteria 922
28 Ga0070692_10521582 3300005345 Bacteria 773
29 Ga0070668_100031491 3300005347 Bacteria 4036
30 Ga0070668_100522030 3300005347 Bacteria 1030
31 Ga0070669_100000005 3300005353 Bacteria 309134
32 Ga0070669_100145013 3300005353 Bacteria 1834
33 Ga0070671_100001688 3300005355 Bacteria 16743
34 Ga0070659_100015479 3300005366 Bacteria 5713
35 Ga0070659_100025286 3300005366 Bacteria 4558
36 Ga0070659_100187681 3300005366 Bacteria 1698
37 Ga0070659_100436082 3300005366 Bacteria 1109
38 Ga0070667_100000509 3300005367 Bacteria 39258
39 Ga0070667_100205027 3300005367 Bacteria 1750
40 Ga0070714_100502967 3300005435 Bacteria 1156
41 Ga0070694_100006272 3300005444 Bacteria 7215
42 Ga0070694_100417201 3300005444 Bacteria 1054
43 Ga0070663_100017321 3300005455 Bacteria 4701
44 Ga0070662_100005999 3300005457 Bacteria 7794
45 Ga0070662_100020667 3300005457 Bacteria 4488
46 Ga0070662_100116564 3300005457 Bacteria 2042
47 Ga0070681_10042602 3300005458 Bacteria 4548
48 Ga0070681_10532277 3300005458 Bacteria 1088
49 Ga0070679_100558474 3300005530 Bacteria 1088
50 Ga0070679_100966339 3300005530 Bacteria 795
51 Ga0070679_101063600 3300005530 Bacteria 754
52 Ga0070684_100006143 3300005535 Bacteria 9261
53 Ga0070684_101246602 3300005535 Bacteria 699
54 Ga0068853_100149358 3300005539 Bacteria 2102
55 Ga0068853_100913373 3300005539 Bacteria 843
56 Ga0070672_101031581 3300005543 Bacteria 730
57 Ga0070695_100012208 3300005545 Bacteria 5152
58 Ga0070696_100020847 3300005546 Bacteria 4441
59 Ga0070693_100123876 3300005547 Bacteria 1606
60 Ga0070693_100194215 3300005547 Bacteria 1315
61 Ga0070665_100008990 3300005548 Bacteria 10117
62 Ga0068855_100075334 3300005563 Bacteria 3918
63 Ga0068855_100077863 3300005563 Bacteria 3847
64 Ga0068855_100384370 3300005563 Bacteria 1541
65 Ga0068855_101384363 3300005563 Bacteria 725
66 Ga0070664_100058561 3300005564 Bacteria 3277
67 Ga0070664_100316282 3300005564 Bacteria 1414
68 Ga0070664_100972193 3300005564 Bacteria 797
69 Ga0068857_100158743 3300005577 Bacteria 2051
70 Ga0068857_100257683 3300005577 Bacteria 1600
71 Ga0068857_101346163 3300005577 Bacteria 694
72 Ga0068854_100141974 3300005578 Bacteria 1844
73 Ga0068854_100418515 3300005578 Bacteria 1112
74 Ga0068856_100395070 3300005614 Bacteria 1402
75 Ga0068852_100072877 3300005616 Bacteria 3020
76 Ga0068852_100357649 3300005616 Bacteria 1427
77 Ga0068852_100779383 3300005616 Bacteria 969
78 Ga0068852_101354488 3300005616 Bacteria 733
79 Ga0068859_100001213 3300005617 Bacteria 26290
80 Ga0068859_100570248 3300005617 Bacteria 1226
81 Ga0068859_101300026 3300005617 Bacteria 801
82 Ga0068864_100000042 3300005618 Bacteria 162930
83 Ga0068864_100001733 3300005618 Bacteria 17945
84 Ga0068864_100018547 3300005618 Bacteria 5816
85 Ga0068864_100888283 3300005618 Bacteria 880
86 Ga0068861_100272107 3300005719 Bacteria 1455
87 Ga0068863_100008862 3300005841 Bacteria 9823
88 Ga0068863_100020689 3300005841 Bacteria 6284
89 Ga0068863_100246920 3300005841 Bacteria 1723
90 Ga0068863_100346541 3300005841 Bacteria 1446
91 Ga0068858_100111694 3300005842 Bacteria 2552
92 Ga0068858_100216400 3300005842 Bacteria 1814
93 Ga0068858_101090817 3300005842 Bacteria 784
94 Ga0068860_100100372 3300005843 Bacteria 2761
95 Ga0068860_100171254 3300005843 Bacteria 2097
96 Ga0068862_100000005 3300005844 Bacteria 350713
97 Ga0075428_100101659 3300006844 Bacteria 3134
98 Ga0075433_10008969 3300006852 Bacteria 7985
99 Ga0075434_100274314 3300006871 Bacteria 1706
100 Ga0097620_100001213 3300006931 Bacteria 26290
101 Ga0097620_100570327 3300006931 Bacteria 1226
102 Ga0097620_101300031 3300006931 Bacteria 801
103 Ga0075435_100398318 3300007076 Bacteria 1184
104 Ga0105240_10011659 3300009093 Bacteria 12219
105 Ga0105240_10200962 3300009093 Bacteria 2336
106 Ga0105240_10878387 3300009093 Bacteria 966
107 Ga0111539_10226186 3300009094 Bacteria 2179
108 Ga0105245_10065862 3300009098 Bacteria 3277
109 Ga0105243_10116501 3300009148 Bacteria 2244
110 Ga0105243_10561032 3300009148 Bacteria 1093
111 Ga0105241_10591439 3300009174 Bacteria 1001
112 Ga0105248_10003466 3300009177 Bacteria 17517
113 Ga0105248_10003919 3300009177 Bacteria 16458
114 Ga0105248_10028504 3300009177 Bacteria 6221
115 Ga0105248_10049805 3300009177 Bacteria 4697
116 Ga0105248_10267144 3300009177 Bacteria 1926
117 Ga0105237_10002201 3300009545 Bacteria 24419
118 Ga0105238_10264916 3300009551 Bacteria 1698
119 Ga0105249_10052518 3300009553 Bacteria 3722
120 Ga0105249_10523023 3300009553 Bacteria 1234
121 Ga0105239_10000504 3300010375 Bacteria 56619
122 Ga0105246_10005685 3300011119 Bacteria 7609
123 Ga0157373_10060505 3300013100 Bacteria 2683
124 Ga0157373_10446569 3300013100 Bacteria 930
125 Ga0157371_10260126 3300013102 Bacteria 1251
126 Ga0157371_10313974 3300013102 Bacteria 1136
127 Ga0157371_10676977 3300013102 Bacteria 771
128 Ga0157371_10742630 3300013102 Bacteria 737
129 Ga0157370_10331267 3300013104 Bacteria 1404
130 Ga0157370_10835688 3300013104 Bacteria 837
131 Ga0157369_10062735 3300013105 Bacteria 4004
132 Ga0157369_10182746 3300013105 Bacteria 2206
133 Ga0157369_10515349 3300013105 Bacteria 1237
134 Ga0157369_10851457 3300013105 Bacteria 936
135 Ga0163162_10363858 3300013306 Bacteria 1579
136 Ga0157372_10091733 3300013307 Bacteria 3455
137 Ga0157372_10591681 3300013307 Bacteria 1293
138 Ga0157375_10452808 3300013308 Bacteria 1449
139 Ga0163163_10331230 3300014325 Bacteria 1577
140 Ga0157380_10000316 3300014326 Bacteria 29249
141 Ga0157377_10013269 3300014745 Bacteria 4167
142 Ga0157379_10194369 3300014968 Bacteria 1834
143 Ga0157379_10792095 3300014968 Bacteria 894
144 Ga0206354_10999548 3300020081 Bacteria 1412
145 Ga0206353_11350098 3300020082 Bacteria 1204
146 Ga0207710_10263382 3300025900 Bacteria 864
147 Ga0207680_10210509 3300025903 Bacteria 1329
148 Ga0207647_10001197 3300025904 Bacteria 19985
149 Ga0207705_10005573 3300025909 Bacteria 9408
150 Ga0207705_10008774 3300025909 Bacteria 7368
151 Ga0207705_10082609 3300025909 Bacteria 2343
152 Ga0207705_10191122 3300025909 Bacteria 1548
153 Ga0207705_10229548 3300025909 Bacteria 1411
154 Ga0207654_10565009 3300025911 Bacteria 809
155 Ga0207707_10066885 3300025912 Bacteria 3129
156 Ga0207707_10167286 3300025912 Bacteria 1921
157 Ga0207695_10014316 3300025913 Bacteria 9404
158 Ga0207671_10001006 3300025914 Bacteria 34514
159 Ga0207693_10549007 3300025915 Bacteria 901
160 Ga0207660_10000716 3300025917 Bacteria 22075
161 Ga0207660_10037476 3300025917 Bacteria 3379
162 Ga0207660_10083296 3300025917 Bacteria 2355
163 Ga0207657_10009514 3300025919 Bacteria 9759
164 Ga0207657_10070445 3300025919 Bacteria 2963
165 Ga0207657_10087762 3300025919 Bacteria 2602
166 Ga0207657_10200275 3300025919 Bacteria 1607
167 Ga0207649_10019831 3300025920 Bacteria 3848
168 Ga0207649_10416704 3300025920 Bacteria 1008
169 Ga0207652_10224613 3300025921 Bacteria 1692
170 Ga0207652_11071039 3300025921 Bacteria 706
171 Ga0207681_10000003 3300025923 Bacteria 713245
172 Ga0207681_10007427 3300025923 Bacteria 6712
173 Ga0207681_10114503 3300025923 Bacteria 1967
174 Ga0207650_10000012 3300025925 Bacteria 437889
175 Ga0207650_10007544 3300025925 Bacteria 7416
176 Ga0207650_10688685 3300025925 Bacteria 863
177 Ga0207687_10027561 3300025927 Bacteria 3813
178 Ga0207664_10437883 3300025929 Bacteria 1166
179 Ga0207644_10021739 3300025931 Bacteria 4374
180 Ga0207690_10014571 3300025932 Bacteria 4749
181 Ga0207690_10028676 3300025932 Bacteria 3529
182 Ga0207690_10049374 3300025932 Bacteria 2805
183 Ga0207690_10052538 3300025932 Bacteria 2730
184 Ga0207690_10081906 3300025932 Bacteria 2256
185 Ga0207706_10048958 3300025933 Bacteria 3736
186 Ga0207706_10194301 3300025933 Bacteria 1780
187 Ga0207706_10405269 3300025933 Bacteria 1182
188 Ga0207686_10100380 3300025934 Bacteria 1931
189 Ga0207709_10052793 3300025935 Bacteria 2498
190 Ga0207691_10042453 3300025940 Bacteria 4192
191 Ga0207691_10687467 3300025940 Bacteria 863
192 Ga0207711_10001841 3300025941 Bacteria 19341
193 Ga0207711_10011282 3300025941 Bacteria 7423
194 Ga0207711_10029608 3300025941 Bacteria 4620
195 Ga0207711_10052455 3300025941 Bacteria 3495
196 Ga0207689_10043595 3300025942 Bacteria 3709
197 Ga0207661_10064905 3300025944 Bacteria 2961
198 Ga0207667_10024604 3300025949 Bacteria 6607
199 Ga0207667_10226474 3300025949 Bacteria 1915
200 Ga0207667_10268121 3300025949 Bacteria 1745
201 Ga0207651_10172006 3300025960 Bacteria 1709
202 Ga0207712_10001096 3300025961 Bacteria 18922
203 Ga0207668_10156017 3300025972 Bacteria 1773
204 Ga0207640_10023010 3300025981 Bacteria 3740
205 Ga0207640_10025447 3300025981 Bacteria 3583
206 Ga0207640_10773752 3300025981 Bacteria 829
207 Ga0207640_10998261 3300025981 Bacteria 736
208 Ga0207658_10005307 3300025986 Bacteria 8864
209 Ga0207658_10067391 3300025986 Bacteria 2696
210 Ga0207677_10377291 3300026023 Bacteria 1196
211 Ga0207703_10031132 3300026035 Bacteria 4217
212 Ga0207703_10203718 3300026035 Bacteria 1760
213 Ga0207639_10022094 3300026041 Bacteria 4579
214 Ga0207639_10322215 3300026041 Bacteria 1372
215 Ga0207678_10005823 3300026067 Bacteria 10982
216 Ga0207678_10584128 3300026067 Bacteria 979
217 Ga0207641_10000779 3300026088 Bacteria 34088
218 Ga0207641_10012679 3300026088 Bacteria 6911
219 Ga0207641_10052296 3300026088 Bacteria 3459
220 Ga0207676_10000009 3300026095 Bacteria 545256
221 Ga0207676_10013612 3300026095 Bacteria 5839
222 Ga0207676_10038744 3300026095 Bacteria 3640
223 Ga0207674_10007396 3300026116 Bacteria 12796
224 Ga0207674_10064358 3300026116 Bacteria 3699
225 Ga0207674_10098627 3300026116 Bacteria 2905
226 Ga0207675_100001142 3300026118 Bacteria 26307
227 Ga0207675_100556359 3300026118 Bacteria 1147
228 Ga0207698_10087723 3300026142 Bacteria 2535
229 Ga0207698_10167392 3300026142 Bacteria 1931
230 Ga0207698_10189361 3300026142 Bacteria 1831
231 Ga0207698_10537733 3300026142 Bacteria 1143
232 Ga0207698_11015223 3300026142 Bacteria 841
233 Ga0268266_10000458 3300028379 Bacteria 59553
234 Ga0268265_10000001 3300028380 Bacteria 1230727
235 Ga0268264_10014274 3300028381 Bacteria 6531
236 Ga0268264_10073314 3300028381 Bacteria 2905
237 Ga0307406_10281448 3300031901 Bacteria 1269
238 Ga0307412_10213438 3300031911 Bacteria 1474
239 Ga0307416_100275988 3300032002 Bacteria 1654
240 Ga0307416_100427189 3300032002 Bacteria 1371
241 Ga0307415_100676196 3300032126 Bacteria 928
242 Ga0373962_0064840 3300035242 Bacteria 1080
243 Ga0395899_0029802 3300037312 Bacteria 4104
244 Ga0395899_0116642 3300037312 Bacteria 1915
245 Ga0395899_0121620 3300037312 Bacteria 1869
246 Ga0395899_0152480 3300037312 Bacteria 1637
247 Ga0395899_0229758 3300037312 Bacteria 1281
248 Ga0395899_0492588 3300037312 Bacteria 796
249 Ga0395900_0005504 3300037418 Bacteria 13256
250 Ga0395900_0066233 3300037418 Bacteria 3712
251 Ga0395900_0101157 3300037418 Bacteria 2960
252 Ga0395900_0115757 3300037418 Bacteria 2751
253 Ga0395900_0160135 3300037418 Bacteria 2296
254 Ga0395900_0232775 3300037418 Bacteria 1852
255 Ga0395900_0570391 3300037418 Bacteria 1074
256 Ga0395898_0359454 3300037466 Bacteria 1388
257 Ga0395905_0026283 3300037471 Bacteria 5489
258 Ga0395905_0084179 3300037471 Bacteria 2980
259 Ga0395905_0093228 3300037471 Bacteria 2824
260 Ga0395905_0228915 3300037471 Bacteria 1738
261 Ga0395905_0489619 3300037471 Bacteria 1129
262 Ga0395905_0848548 3300037471 Bacteria 816
263 Ga0395901_0001072 3300038443 Bacteria 29295
264 Ga0395901_0324838 3300038443 Bacteria 1591
265 Ga0395901_0428480 3300038443 Bacteria 1355
266 Ga0395901_0742799 3300038443 Bacteria 975
267 Ga0395901_0747363 3300038443 Bacteria 971
268 Ga0395901_1501154 3300038443 Bacteria 630
269 Ga0439461_0076655 3300041410 Bacteria 783
270 Ga0450917_003579 3300042120 Bacteria 1126
271 Ga0450890_010203 3300042127 Bacteria 1207
272 Ga0450889_001247 3300042144 Bacteria 2648
273 Ga0466972_0041449 3300044658 Bacteria 2242
274 Ga0466961_0735426 3300044693 Bacteria 590
275 Ga0466963_0016430 3300044694 Bacteria 4602
276 Ga0466963_0082619 3300044694 Bacteria 2178
277 Ga0466968_0014821 3300044735 Bacteria 3084
278 Ga0466957_0061544 3300044842 Bacteria 2304
279 Ga0466957_0424925 3300044842 Bacteria 912
280 Ga0466958_0247573 3300045836 Bacteria 1139
281 Ga0466967_0074333 3300045976 Bacteria 3052
282 Ga0466967_0079714 3300045976 Bacteria 2952
283 Ga0466967_0096896 3300045976 Bacteria 2691
284 Ga0466967_0446252 3300045976 Bacteria 1264
285 Ga0466967_0473414 3300045976 Bacteria 1226
286 Ga0466967_1591856 3300045976 Bacteria 651
287 Ga0495642_0131332 3300046528 Bacteria 1078
288 Ga0495669_0285222 3300046684 Bacteria 795
289 Ga0495672_0442932 3300047320 Bacteria 587
290 Ga0495686_0000632 3300047472 Bacteria 48487
291 Ga0496100_0059649 3300048903 Bacteria 2508
292 Ga0496106_0027899 3300048909 Bacteria 4203
293 Ga0496107_0002482 3300048910 Bacteria 11974
294 Ga0496108_0176151 3300048911 Bacteria 1851
295 Ga0496109_0015589 3300048912 Bacteria 6628
296 Ga0496110_0059637 3300048913 Bacteria 3364
297 Ga0496111_0007841 3300048914 Bacteria 7032
298 Ga0496112_0050142 3300048915 Bacteria 4092
299 Ga0496113_0195345 3300048916 Bacteria 1607
300 Ga0496117_0073562 3300048920 Bacteria 2279
301 Ga0496118_0104798 3300048921 Bacteria 1897
302 Ga0496118_0139958 3300048921 Bacteria 1536
303 Ga0496121_0005099 3300048924 Bacteria 17122
304 Ga0496125_0171287 3300048928 Bacteria 1459
305 Ga0496126_0190868 3300048929 Bacteria 1735
306 Ga0501043_0126115 3300049579 Bacteria 2007
307 Ga0501047_0054401 3300049581 Bacteria 3871
308 Ga0501047_0781467 3300049581 Bacteria 770
309 Ga0501068_0359624 3300049584 Bacteria 936
310 Ga0501070_0265251 3300049586 Bacteria 1403
311 Ga0501073_0468837 3300049589 Bacteria 871
312 Ga0501208_030933 3300049655 Bacteria 944
313 Ga0501249_001658 3300049679 Bacteria 4543
314 Ga0501080_0493784 3300049742 Bacteria 1094
315 Ga0501044_0221587 3300049823 Bacteria 1842
316 nmdc:mga05p37_508118_c1 3300050507 Bacteria 1381
317 nmdc:mga09592_614567_c1 3300050508 Bacteria 930
318 nmdc:mga08y16_191917_c1 3300050511 Bacteria 2119
319 nmdc:mga0rr50_94921_c1 3300050513 Bacteria 2330
320 nmdc:mga0a205_220990_c1 3300050515 Bacteria 1780
321 Ga0500559_0274935 3300053136 Bacteria 792
322 Ga0466962_0168405 3300061719 Bacteria 1066
323 2643728042 2643221541 Bacteria 5498788
324 2644039226 2643221605 Bacteria 4772303
325 2644043008 2643221606 Bacteria 5588032
326 2644395561 2643221671 Bacteria 5496681
327 Ga0307409_100936990
328 JGI24740J21852_10010774
329 JGI24740J21852_10068122
330 JGI24749J21850_1000060
331 JGI24751J29686_10000034
332 Ga0065707_10125895
333 Ga0070658_10301973
334 Ga0070658_10784877
335 Ga0070683_100016190
336 Ga0070670_100000033
337 Ga0070670_100001163
338 Ga0068869_100190230
339 Ga0070666_10247290
340 Ga0070680_100000964
341 Ga0070680_100264205
342 Ga0070680_100297022
343 Ga0068868_100680229
344 Ga0070660_100016556
345 Ga0070660_100128455
346 Ga0070660_100148540
347 Ga0070660_100336097
348 Ga0070660_100595176
349 Ga0070661_100157299
350 Ga0070661_100338107
351 Ga0070692_10122323
352 Ga0070692_10136094
353 Ga0070692_10345678
354 Ga0070692_10521582
355 Ga0070668_100031491
356 Ga0070668_100522030
357 Ga0070669_100000005
358 Ga0070669_100145013
359 Ga0070671_100001688
360 Ga0070659_100015479
361 Ga0070659_100025286
362 Ga0070659_100187681
363 Ga0070659_100436082
364 Ga0070667_100000509
365 Ga0070667_100205027
366 Ga0070714_100502967
367 Ga0070694_100006272
368 Ga0070694_100417201
369 Ga0070663_100017321
370 Ga0070662_100005999
371 Ga0070662_100020667
372 Ga0070662_100116564
373 Ga0070681_10042602
374 Ga0070681_10532277
375 Ga0070679_100558474
376 Ga0070679_100966339
377 Ga0070679_101063600
378 Ga0070684_100006143
379 Ga0070684_101246602
380 Ga0068853_100149358
381 Ga0068853_100913373
382 Ga0070672_101031581
383 Ga0070695_100012208
384 Ga0070696_100020847
385 Ga0070693_100123876
386 Ga0070693_100194215
387 Ga0070665_100008990
388 Ga0068855_100075334
389 Ga0068855_100077863
390 Ga0068855_100384370
391 Ga0068855_101384363
392 Ga0070664_100058561
393 Ga0070664_100316282
394 Ga0070664_100972193
395 Ga0068857_100158743
396 Ga0068857_100257683
397 Ga0068857_101346163
398 Ga0068854_100141974
399 Ga0068854_100418515
400 Ga0068856_100395070
401 Ga0068852_100072877
402 Ga0068852_100357649
403 Ga0068852_100779383
404 Ga0068852_101354488
405 Ga0068859_100001213
406 Ga0068859_100570248
407 Ga0068859_101300026
408 Ga0068864_100000042
409 Ga0068864_100001733
410 Ga0068864_100018547
411 Ga0068864_100888283
412 Ga0068861_100272107
413 Ga0068863_100008862
414 Ga0068863_100020689
415 Ga0068863_100246920
416 Ga0068863_100346541
417 Ga0068858_100111694
418 Ga0068858_100216400
419 Ga0068858_101090817
420 Ga0068860_100100372
421 Ga0068860_100171254
422 Ga0068862_100000005
423 Ga0075428_100101659
424 Ga0075433_10008969
425 Ga0075434_100274314
426 Ga0097620_100001213
427 Ga0097620_100570327
428 Ga0097620_101300031
429 Ga0075435_100398318
430 Ga0105240_10011659
431 Ga0105240_10200962
432 Ga0105240_10878387
433 Ga0111539_10226186
434 Ga0105245_10065862
435 Ga0105243_10116501
436 Ga0105243_10561032
437 Ga0105241_10591439
438 Ga0105248_10003466
439 Ga0105248_10003919
440 Ga0105248_10028504
441 Ga0105248_10049805
442 Ga0105248_10267144
443 Ga0105237_10002201
444 Ga0105238_10264916
445 Ga0105249_10052518
446 Ga0105249_10523023
447 Ga0105239_10000504
448 Ga0105246_10005685
449 Ga0157373_10060505
450 Ga0157373_10446569
451 Ga0157371_10260126
452 Ga0157371_10313974
453 Ga0157371_10676977
454 Ga0157371_10742630
455 Ga0157370_10331267
456 Ga0157370_10835688
457 Ga0157369_10062735
458 Ga0157369_10182746
459 Ga0157369_10515349
460 Ga0157369_10851457
461 Ga0163162_10363858
462 Ga0157372_10091733
463 Ga0157372_10591681
464 Ga0157375_10452808
465 Ga0163163_10331230
466 Ga0157380_10000316
467 Ga0157377_10013269
468 Ga0157379_10194369
469 Ga0157379_10792095
470 Ga0206354_10999548
471 Ga0206353_11350098
472 Ga0207710_10263382
473 Ga0207680_10210509
474 Ga0207647_10001197
475 Ga0207705_10005573
476 Ga0207705_10008774
477 Ga0207705_10082609
478 Ga0207705_10191122
479 Ga0207705_10229548
480 Ga0207654_10565009
481 Ga0207707_10066885
482 Ga0207707_10167286
483 Ga0207695_10014316
484 Ga0207671_10001006
485 Ga0207693_10549007
486 Ga0207660_10000716
487 Ga0207660_10037476
488 Ga0207660_10083296
489 Ga0207657_10009514
490 Ga0207657_10070445
491 Ga0207657_10087762
492 Ga0207657_10200275
493 Ga0207649_10019831
494 Ga0207649_10416704
495 Ga0207652_10224613
496 Ga0207652_11071039
497 Ga0207681_10000003
498 Ga0207681_10007427
499 Ga0207681_10114503
500 Ga0207650_10000012
501 Ga0207650_10007544
502 Ga0207650_10688685
503 Ga0207687_10027561
504 Ga0207664_10437883
505 Ga0207644_10021739
506 Ga0207690_10014571
507 Ga0207690_10028676
508 Ga0207690_10049374
509 Ga0207690_10052538
510 Ga0207690_10081906
511 Ga0207706_10048958
512 Ga0207706_10194301
513 Ga0207706_10405269
514 Ga0207686_10100380
515 Ga0207709_10052793
516 Ga0207691_10042453
517 Ga0207691_10687467
518 Ga0207711_10001841
519 Ga0207711_10011282
520 Ga0207711_10029608
521 Ga0207711_10052455
522 Ga0207689_10043595
523 Ga0207661_10064905
524 Ga0207667_10024604
525 Ga0207667_10226474
526 Ga0207667_10268121
527 Ga0207651_10172006
528 Ga0207712_10001096
529 Ga0207668_10156017
530 Ga0207640_10023010
531 Ga0207640_10025447
532 Ga0207640_10773752
533 Ga0207640_10998261
534 Ga0207658_10005307
535 Ga0207658_10067391
536 Ga0207677_10377291
537 Ga0207703_10031132
538 Ga0207703_10203718
539 Ga0207639_10022094
540 Ga0207639_10322215
541 Ga0207678_10005823
542 Ga0207678_10584128
543 Ga0207641_10000779
544 Ga0207641_10012679
545 Ga0207641_10052296
546 Ga0207676_10000009
547 Ga0207676_10013612
548 Ga0207676_10038744
549 Ga0207674_10007396
550 Ga0207674_10064358
551 Ga0207674_10098627
552 Ga0207675_100001142
553 Ga0207675_100556359
554 Ga0207698_10087723
555 Ga0207698_10167392
556 Ga0207698_10189361
557 Ga0207698_10537733
558 Ga0207698_11015223
559 Ga0268266_10000458
560 Ga0268265_10000001
561 Ga0268264_10014274
562 Ga0268264_10073314
563 Ga0307406_10281448
564 Ga0307412_10213438
565 Ga0307416_100275988
566 Ga0307416_100427189
567 Ga0307415_100676196
568 Ga0373962_0064840
569 Ga0395899_0029802
570 Ga0395899_0116642
571 Ga0395899_0121620
572 Ga0395899_0152480
573 Ga0395899_0229758
574 Ga0395899_0492588
575 Ga0395900_0005504
576 Ga0395900_0066233
577 Ga0395900_0101157
578 Ga0395900_0115757
579 Ga0395900_0160135
580 Ga0395900_0232775
581 Ga0395900_0570391
582 Ga0395898_0359454
583 Ga0395905_0026283
584 Ga0395905_0084179
585 Ga0395905_0093228
586 Ga0395905_0228915
587 Ga0395905_0489619
588 Ga0395905_0848548
589 Ga0395901_0001072
590 Ga0395901_0324838
591 Ga0395901_0428480
592 Ga0395901_0742799
593 Ga0395901_0747363
594 Ga0395901_1501154
595 Ga0439461_0076655
596 Ga0450917_003579
597 Ga0450890_010203
598 Ga0450889_001247
599 Ga0466972_0041449
600 Ga0466961_0735426
601 Ga0466963_0016430
602 Ga0466963_0082619
603 Ga0466968_0014821
604 Ga0466957_0061544
605 Ga0466957_0424925
606 Ga0466958_0247573
607 Ga0466967_0074333
608 Ga0466967_0079714
609 Ga0466967_0096896
610 Ga0466967_0446252
611 Ga0466967_0473414
612 Ga0466967_1591856
613 Ga0495642_0131332
614 Ga0495669_0285222
615 Ga0495672_0442932
616 Ga0495686_0000632
617 Ga0496100_0059649
618 Ga0496106_0027899
619 Ga0496107_0002482
620 Ga0496108_0176151
621 Ga0496109_0015589
622 Ga0496110_0059637
623 Ga0496111_0007841
624 Ga0496112_0050142
625 Ga0496113_0195345
626 Ga0496117_0073562
627 Ga0496118_0104798
628 Ga0496118_0139958
629 Ga0496121_0005099
630 Ga0496125_0171287
631 Ga0496126_0190868
632 Ga0501043_0126115
633 Ga0501047_0054401
634 Ga0501047_0781467
635 Ga0501068_0359624
636 Ga0501070_0265251
637 Ga0501073_0468837
638 Ga0501208_030933
639 Ga0501249_001658
640 Ga0501080_0493784
641 Ga0501044_0221587
642 nmdc:mga05p37_508118_c1
643 nmdc:mga09592_614567_c1
644 nmdc:mga08y16_191917_c1
645 nmdc:mga0rr50_94921_c1
646 nmdc:mga0a205_220990_c1
647 Ga0500559_0274935
648 Ga0466962_0168405
649 2643728042
650 2644039226
651 2644043008
652 2644395561

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02576

RimP_N

RimP N-terminal domain

33

107

0.98

PF17384

DUF150_C

RimP C-terminal SH3 domain

110

176

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2x4j-assembly1.cif.gz_A crystal structure of orf137 from pyrobaculum spherical virus 0.8601 97 151
7nav-assembly1.cif.gz_X bacterial 30s ribosomal subunit assembly complex state d (consensus refinement) 0.8454 4 152
5aji-assembly1.cif.gz_E mscs d67r1 high resolution 0.8346 97 140
8ddj-assembly1.cif.gz_A open mscs in pc14.1 nanodiscs 0.8209 97 140
7raz-assembly1.cif.gz_D small conductance mechanosensitive channel mscs 0.8201 97 140
ID Description Score Start End Superfamily
af_P0A8A8_87_147_2.30.30.180 Mainly Beta;Roll;SH3 type barrels.;Ribosome maturation factor RimP, C-terminal domain 0.9747 89 150 2.30.30.180
af_P0A8A8_87_147_2.30.30.180 Mainly Beta;Roll;SH3 type barrels.;Ribosome maturation factor RimP, C-terminal domain 0.9593 89 150 2.30.30.180
af_P0A8A8_1_79_3.30.300.70 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;RimP-like superfamily, N-terminal 0.9427 1 81 3.30.300.70
af_Q2G2D3_1_80_3.30.300.70 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;RimP-like superfamily, N-terminal 0.9309 1 81 3.30.300.70
af_P0A8A8_1_79_3.30.300.70 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;RimP-like superfamily, N-terminal 0.9199 1 81 3.30.300.70
ID Description Score Start End GO Terms
AF-A0A2G2GL65-F1-model_v4 Ribosome maturation factor RimP 0.9707 4 159 GO:0000028
GO:0005829
GO:0006412
AF-A0A6G7ZM51-F1-model_v4 Ribosome maturation factor RimP 0.9692 1 175 GO:0000028
GO:0005829
GO:0006412
AF-A0A6G7ZM51-F1-model_v4 Ribosome maturation factor RimP 0.9638 1 175 GO:0000028
GO:0005829
GO:0006412
AF-A0A6B1F3X5-F1-model_v4 Ribosome maturation factor RimP 0.9617 5 159 GO:0000028
GO:0005829
GO:0006412
AF-A0A4S2HAR4-F1-model_v4 Ribosome maturation factor RimP 0.9605 1 159 GO:0000028
GO:0005829
GO:0006412

Map