F408080

General Info

Members Datasets Scaffolds Average Seq Length
325 200 288 804

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2545555834|2545676594
Length 896
Sequence SHMKKSMFIFSRMADSRSTAVVPTGCAAGRVGRAIDLEHDEPAAEARPALRRLTKGKRVASLPERAQVVIVGGGIVGCSVAYHLTLRGCTDVVLLERKQLTSGTTWHAAGLVGQLRATHNLTRLAQYTTELYATLEAQTGQATGFLQIGSLGLATNAERMEELRRGAAMARCFGLEVNVLTSDEARALWPLMAADDLVGAVHLPRDGQTNPIDTTQALAKGARMRGARIFENLAVDEIVVEGGRAVGVRTALGDIRAEAVVNCAGMWAHDLGARAGATVPLHAAEHFYVVTEPMPGLPPHLPVLRDADNCTYIKEDAGKLLVGWFEPVAKPWGMDGIPESFAFDSLPDDLEHIEPLLEAAVRRVPALGEAGIQLFFNGPESFTPDDRYLLGETAEVRGLFVAAGFNSIGIQSAGGAGKVLSDWIIDGHPPMDLWDVDIRRTLPFQRNRRYLRDRTVESLGLLYDMHWPFRQPTTARGVRRSTLHDRLAERGACFGEAAGWERPNWFAPEGEAAQYRYTFGRQNWFPHSAAEHRATREAVGLFDLSSFAKFVLDGADAEAALNRICANDIAIPVGQVVYTPWLNERGGIEADVTVTRESETRFLIVTAAATQARDFAWLTRNIPAEARATALDVTSAQAVLGIMGPRSRELLSLLTDADLSNAAFPFGTSRVVDLAYARVRASRITYVGELGWELFIPTEFAQGVFDALMAAGRDLGLRLAGYHALNSLRMEKGYRHWGHDITDEDTPLESGLSFAVAWDKNGGFIGREALLRRRDHVPSRRLVGIALESPDHLLYHNEPILRDGRIIGRVTSGMFGHTVGRALGLGYVATNGQALTAHRIEVDVAGERVPARLSLEPFYDPEDRRIQDLPAETELGRGPAITPSMPLPRQLRSETP

Samples

Sample ID Description Type Environment
1 2511231012 Pseudomonas sp. GM33 Isolate Nodule
2 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
3 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
4 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
5 2738543004 Pseudomonas sp. GV085 Isolate Unclassified
6 2756170246 Mesorhizobium loti DSM 2626 Isolate Nodule
7 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
8 2824773399 Bradyrhizobium sp. HAMBI 2130 Isolate Unclassified
9 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
10 2847670302 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 Isolate Nodule
11 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
12 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
13 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
14 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
15 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
16 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
17 2932784394 Bradyrhizobium sp. S3.2.12 Isolate Nodule
18 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
19 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule
20 2935864058 Bradyrhizobium sp. RT9a Isolate Nodule
21 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
22 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
23 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
24 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
25 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
26 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
27 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
28 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
29 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
30 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
62 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
63 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
67 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
70 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
78 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
79 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
80 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
81 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
82 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
83 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
112 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
113 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
116 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
117 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
122 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
123 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
124 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
133 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
134 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
135 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
136 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
139 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
140 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
141 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
142 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
143 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
146 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
147 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
153 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
154 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
176 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
177 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
189 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
190 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
196 641522639 Methylobacterium sp. 4-46 Isolate Nodule
197 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
198 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
199 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
200 8019775933 Pseudomonas sp. PvR083 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.62
Metatranscriptomes 0
Isolates 11.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.23
Nodule 8.92
Rhizoplane 1.54
Rhizosphere 80.31
Stem 0
Stem Tuber 0
Unclassified 8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10067942 3300005290 Bacteria 19831
2 Ga0070683_100000652 3300005329 Bacteria 25052
3 Ga0070670_100000048 3300005331 Bacteria 132947
4 Ga0070687_100018841 3300005343 Bacteria 3201
5 Ga0070673_100032470 3300005364 Bacteria 3932
6 Ga0070667_100000028 3300005367 Bacteria 180376
7 Ga0070667_100003382 3300005367 Bacteria 13604
8 Ga0070667_100016284 3300005367 Bacteria 6149
9 Ga0070708_100014313 3300005445 Bacteria 6523
10 Ga0070681_10025032 3300005458 Bacteria 6006
11 Ga0068867_100008312 3300005459 Bacteria 7327
12 Ga0068867_100008809 3300005459 Bacteria 7126
13 Ga0070707_100024875 3300005468 Bacteria 5675
14 Ga0070707_100056565 3300005468 Bacteria 3762
15 Ga0070684_100001124 3300005535 Bacteria 19191
16 Ga0070697_100025518 3300005536 Bacteria 4714
17 Ga0070696_100000305 3300005546 Bacteria 29758
18 Ga0070665_100006720 3300005548 Bacteria 11688
19 Ga0070665_100043264 3300005548 Bacteria 4526
20 Ga0068859_100038574 3300005617 Bacteria 4792
21 Ga0068861_100017620 3300005719 Bacteria 5075
22 Ga0068863_100041909 3300005841 Bacteria 4351
23 Ga0068863_100042780 3300005841 Bacteria 4303
24 Ga0068863_100098399 3300005841 Bacteria 2778
25 Ga0068858_100009218 3300005842 Bacteria 9425
26 Ga0068860_100000129 3300005843 Bacteria 122623
27 Ga0068860_100003641 3300005843 Bacteria 15853
28 Ga0081455_10002563 3300005937 Bacteria 21582
29 Ga0081455_10016510 3300005937 Bacteria 7124
30 Ga0081539_10000002 3300005985 Bacteria 601032
31 Ga0081539_10000539 3300005985 Bacteria 78266
32 Ga0070717_10006908 3300006028 Bacteria 8381
33 Ga0070717_10024315 3300006028 Bacteria 4808
34 Ga0075432_10001422 3300006058 Bacteria 7794
35 Ga0070716_100014442 3300006173 Bacteria 4044
36 Ga0070716_100024662 3300006173 Bacteria 3203
37 Ga0097621_100026123 3300006237 Bacteria 4577
38 Ga0075428_100017943 3300006844 Bacteria 7820
39 Ga0075428_100018083 3300006844 Bacteria 7789
40 Ga0075428_100030500 3300006844 Bacteria 5963
41 Ga0075430_100000047 3300006846 Bacteria 63972
42 Ga0075430_100000064 3300006846 Bacteria 57146
43 Ga0075430_100036454 3300006846 Bacteria 4170
44 Ga0075431_100000424 3300006847 Bacteria 34431
45 Ga0075431_100005104 3300006847 Bacteria 12912
46 Ga0075431_100007188 3300006847 Bacteria 11072
47 Ga0075431_100019658 3300006847 Bacteria 6891
48 Ga0075431_100076603 3300006847 Bacteria 3452
49 Ga0075433_10000033 3300006852 Bacteria 55337
50 Ga0075433_10005047 3300006852 Bacteria 10343
51 Ga0075433_10050039 3300006852 Bacteria 3637
52 Ga0075433_10062162 3300006852 Bacteria 3270
53 Ga0075433_10086719 3300006852 Bacteria 2764
54 Ga0075434_100003493 3300006871 Bacteria 14056
55 Ga0075434_100048729 3300006871 Bacteria 4204
56 Ga0075434_100077973 3300006871 Bacteria 3308
57 Ga0075429_100016365 3300006880 Bacteria 6427
58 Ga0075429_100022124 3300006880 Bacteria 5514
59 Ga0075429_100025240 3300006880 Bacteria 5159
60 Ga0075429_100031094 3300006880 Bacteria 4640
61 Ga0075429_100049590 3300006880 Bacteria 3651
62 Ga0068865_100002472 3300006881 Bacteria 10939
63 Ga0075436_100052350 3300006914 Bacteria 2818
64 Ga0097620_100038574 3300006931 Bacteria 4792
65 Ga0099794_10002885 3300007265 Bacteria 6456
66 Ga0099795_10000031 3300007788 Bacteria 38284
67 Ga0105244_10002538 3300009036 Bacteria 13711
68 Ga0105240_10008239 3300009093 Bacteria 14932
69 Ga0105240_10009415 3300009093 Bacteria 13827
70 Ga0105240_10025277 3300009093 Bacteria 7807
71 Ga0105240_10032071 3300009093 Bacteria 6804
72 Ga0111539_10000633 3300009094 Bacteria 45453
73 Ga0111539_10001744 3300009094 Bacteria 28885
74 Ga0111539_10130756 3300009094 Bacteria 2940
75 Ga0105245_10021622 3300009098 Bacteria 5645
76 Ga0105247_10001191 3300009101 Bacteria 19372
77 Ga0114129_10000037 3300009147 Bacteria 108744
78 Ga0114129_10000923 3300009147 Bacteria 38342
79 Ga0114129_10001512 3300009147 Bacteria 31448
80 Ga0114129_10002758 3300009147 Bacteria 24478
81 Ga0114129_10004455 3300009147 Bacteria 19767
82 Ga0114129_10024498 3300009147 Bacteria 8551
83 Ga0114129_10042533 3300009147 Bacteria 6397
84 Ga0114129_10132235 3300009147 Bacteria 3426
85 Ga0105243_10038422 3300009148 Bacteria 3728
86 Ga0099796_10000003 3300010159 Bacteria 81717
87 Ga0157371_10000862 3300013102 Bacteria 34564
88 Ga0157371_10001143 3300013102 Bacteria 28586
89 Ga0157374_10036557 3300013296 Bacteria 4499
90 Ga0157378_10004127 3300013297 Bacteria 12828
91 Ga0163163_10018337 3300014325 Bacteria 6549
92 Ga0163163_10093804 3300014325 Bacteria 3018
93 Ga0157379_10011751 3300014968 Bacteria 7645
94 Ga0157376_10005056 3300014969 Bacteria 9197
95 Ga0214544_1000012 3300021320 Bacteria 229808
96 Ga0214542_1000011 3300021321 Bacteria 238260
97 Ga0214543_1000004 3300021327 Bacteria 527190
98 Ga0213874_10005245 3300021377 Bacteria 3010
99 Ga0213876_10001244 3300021384 Bacteria 16091
100 Ga0213875_10001436 3300021388 Bacteria 15444
101 Ga0209455_1000693 3300025272 Bacteria 19857
102 Ga0207655_1000806 3300025728 Bacteria 34049
103 Ga0207684_10016108 3300025910 Bacteria 6422
104 Ga0207695_10037212 3300025913 Bacteria 5252
105 Ga0207695_10042885 3300025913 Bacteria 4826
106 Ga0207646_10023351 3300025922 Bacteria 5681
107 Ga0207646_10080040 3300025922 Bacteria 2921
108 Ga0207681_10009070 3300025923 Bacteria 6075
109 Ga0207650_10000187 3300025925 Bacteria 72348
110 Ga0207664_10013253 3300025929 Bacteria 5910
111 Ga0207664_10033131 3300025929 Bacteria 3967
112 Ga0207644_10025666 3300025931 Bacteria 4053
113 Ga0207706_10076472 3300025933 Bacteria 2944
114 Ga0207704_10001029 3300025938 Bacteria 12386
115 Ga0207665_10033391 3300025939 Bacteria 3410
116 Ga0207691_10025716 3300025940 Bacteria 5525
117 Ga0207689_10020410 3300025942 Bacteria 5576
118 Ga0207661_10000358 3300025944 Bacteria 29302
119 Ga0207658_10000718 3300025986 Bacteria 28639
120 Ga0207703_10023899 3300026035 Bacteria 4805
121 Ga0207702_10035675 3300026078 Bacteria 4158
122 Ga0207641_10003768 3300026088 Bacteria 13317
123 Ga0207648_10001906 3300026089 Bacteria 22796
124 Ga0207674_10095955 3300026116 Bacteria 2951
125 Ga0207675_100102404 3300026118 Bacteria 2698
126 Ga0207683_10025975 3300026121 Bacteria 5056
127 Ga0209179_1000014 3300027512 Bacteria 53305
128 Ga0207428_10000029 3300027907 Bacteria 241338
129 Ga0207428_10035112 3300027907 Bacteria 4101
130 Ga0268266_10000654 3300028379 Bacteria 46877
131 Ga0268266_10032386 3300028379 Unclassified 4441
132 Ga0268265_10040123 3300028380 Bacteria 3455
133 Ga0268264_10000196 3300028381 Bacteria 123687
134 Ga0265316_10025869 3300031344 Bacteria 4891
135 Ga0307509_10000036 3300031507 Bacteria 190164
136 Ga0265313_10002827 3300031595 Bacteria 14612
137 Ga0265342_10014702 3300031712 Bacteria 5186
138 Ga0316576_10004968 3300031727 Bacteria 8056
139 Ga0307516_10000033 3300031730 Bacteria 155697
140 Ga0307410_10051336 3300031852 Bacteria 2779
141 Ga0307409_100043048 3300031995 Bacteria 3386
142 Ga0307416_100000099 3300032002 Bacteria 54301
143 Ga0307415_100000074 3300032126 Bacteria 41368
144 Ga0316583_10002643 3300032133 Bacteria 6258
145 Ga0316583_10009041 3300032133 Bacteria 3592
146 Ga0316580_10000280 3300032139 Bacteria 10984
147 Ga0316582_0005632 3300036647 Bacteria 6479
148 Ga0316582_0055598 3300036647 Bacteria 2523
149 Ga0316584_0019118 3300036712 Bacteria 4949
150 Ga0373925_0000343 3300037068 Bacteria 48454
151 Ga0395899_0054576 3300037312 Bacteria 2957
152 Ga0395900_0001478 3300037418 Bacteria 28033
153 Ga0395900_0005185 3300037418 Bacteria 13681
154 Ga0395898_0013898 3300037466 Bacteria 8273
155 Ga0395898_0014038 3300037466 Bacteria 8231
156 Ga0395905_0061674 3300037471 Bacteria 3508
157 Ga0436364_0180103 3300037853 Bacteria 21328
158 Ga0436364_0586291 3300037853 Bacteria 97560
159 Ga0395901_0006599 3300038443 Bacteria 11729
160 Ga0395901_0075853 3300038443 Bacteria 3508
161 Ga0400483_282241 3300039062 Bacteria 2684
162 Ga0436365_0619646 3300039437 Bacteria 30514
163 Ga0436365_0761686 3300039437 Bacteria 12666
164 Ga0436365_1841312 3300039437 Bacteria 9531
165 Ga0436363_1233784 3300039450 Bacteria 3988
166 Ga0439466_0001070 3300041411 Bacteria 10568
167 Ga0439434_0000954 3300042435 Bacteria 8337
168 Ga0451576_0001229 3300045051 Bacteria 45387
169 Ga0495580_0003259 3300046472 Bacteria 13879
170 Ga0495584_0000990 3300046491 Bacteria 17819
171 Ga0495606_0000389 3300046507 Bacteria 74347
172 Ga0495666_0000960 3300046526 Bacteria 13595
173 Ga0495654_0000345 3300046530 Bacteria 40180
174 Ga0495609_0000048 3300046538 Bacteria 155900
175 Ga0495625_0002091 3300046660 Bacteria 22315
176 Ga0495671_0030574 3300046692 Bacteria 2757
177 Ga0495649_0000568 3300046694 Bacteria 31251
178 Ga0495660_0000287 3300046810 Bacteria 46709
179 Ga0496104_0022345 3300048907 Bacteria 5810
180 Ga0496104_0037507 3300048907 Bacteria 4533
181 Ga0496108_0008898 3300048911 Bacteria 8139
182 Ga0496114_0039077 3300048917 Bacteria 3927
183 Ga0496115_0044820 3300048918 Bacteria 3530
184 Ga0496116_0012581 3300048919 Bacteria 6901
185 Ga0496117_0000290 3300048920 Bacteria 90036
186 Ga0496117_0000933 3300048920 Bacteria 44787
187 Ga0496118_0000064 3300048921 Bacteria 212626
188 Ga0496118_0000999 3300048921 Bacteria 44116
189 Ga0496121_0001238 3300048924 Bacteria 44339
190 Ga0496121_0001337 3300048924 Bacteria 42201
191 Ga0496125_0000975 3300048928 Bacteria 44797
192 Ga0496125_0004753 3300048928 Bacteria 15477
193 Ga0495682_0000097 3300049460 Bacteria 77297
194 Ga0501031_0009201 3300049568 Bacteria 6424
195 Ga0501033_0045066 3300049570 Bacteria 3283
196 Ga0501034_0000139 3300049571 Bacteria 135587
197 Ga0501034_0000372 3300049571 Bacteria 76350
198 Ga0501036_0007828 3300049572 Bacteria 8743
199 Ga0501038_0003228 3300049574 Bacteria 15207
200 Ga0501038_0023573 3300049574 Bacteria 5500
201 Ga0501038_0052820 3300049574 Bacteria 3502
202 Ga0501039_0008220 3300049575 Bacteria 7954
203 Ga0501039_0015182 3300049575 Bacteria 5894
204 Ga0501039_0028469 3300049575 Bacteria 4302
205 Ga0501040_0000583 3300049576 Bacteria 22244
206 Ga0501040_0024584 3300049576 Bacteria 4043
207 Ga0501040_0040840 3300049576 Bacteria 3158
208 Ga0501041_0006757 3300049577 Bacteria 6721
209 Ga0501041_0023115 3300049577 Bacteria 3727
210 Ga0501042_0000004 3300049578 Bacteria 65867
211 Ga0501042_0007187 3300049578 Bacteria 7286
212 Ga0501042_0027053 3300049578 Bacteria 4032
213 Ga0501046_0001914 3300049580 Bacteria 19767
214 Ga0501048_0025203 3300049582 Bacteria 4335
215 Ga0501048_0034765 3300049582 Bacteria 3633
216 Ga0501068_0006104 3300049584 Bacteria 6626
217 Ga0501068_0009806 3300049584 Bacteria 5366
218 Ga0501068_0013034 3300049584 Bacteria 4726
219 Ga0501068_0026170 3300049584 Bacteria 3436
220 Ga0501070_0017522 3300049586 Bacteria 6013
221 Ga0501071_0001212 3300049587 Bacteria 14561
222 Ga0501072_0006707 3300049588 Bacteria 8751
223 Ga0501072_0007143 3300049588 Bacteria 8474
224 Ga0501072_0024375 3300049588 Bacteria 4705
225 Ga0501073_0005136 3300049589 Bacteria 9824
226 Ga0501075_0002100 3300049591 Bacteria 13183
227 Ga0501075_0005822 3300049591 Bacteria 8437
228 Ga0501075_0007879 3300049591 Bacteria 7395
229 Ga0501075_0012550 3300049591 Bacteria 6025
230 Ga0501076_0000047 3300049592 Bacteria 59013
231 Ga0501076_0000595 3300049592 Bacteria 23148
232 Ga0501076_0015354 3300049592 Bacteria 5787
233 Ga0501076_0022857 3300049592 Bacteria 4811
234 Ga0501076_0024110 3300049592 Bacteria 4699
235 Ga0501077_0000303 3300049593 Bacteria 29216
236 Ga0501079_0001668 3300049741 Bacteria 15777
237 Ga0501079_0003345 3300049741 Bacteria 11760
238 Ga0501079_0004724 3300049741 Bacteria 10085
239 Ga0501079_0041002 3300049741 Bacteria 3573
240 Ga0501080_0020318 3300049742 Bacteria 6146
241 Ga0501080_0026798 3300049742 Bacteria 5357
242 Ga0501080_0055237 3300049742 Bacteria 3699
243 Ga0501081_0000076 3300049743 Bacteria 38632
244 Ga0501081_0013659 3300049743 Bacteria 5339
245 Ga0501035_0001844 3300049822 Bacteria 21338
246 Ga0501045_0003578 3300049824 Bacteria 10671
247 Ga0501045_0011182 3300049824 Bacteria 6293
248 Ga0501045_0050442 3300049824 Bacteria 3037
249 nmdc:mga05p37_17321_c1 3300050507 Bacteria 8693
250 nmdc:mga05p37_18133_c1 3300050507 Bacteria 8505
251 nmdc:mga05p37_23333_c1 3300050507 Bacteria 7507
252 nmdc:mga05p37_34159_c1 3300050507 Bacteria 6228
253 nmdc:mga05p37_37434_c1 3300050507 Bacteria 5948
254 nmdc:mga05p37_4607_c1 3300050507 Bacteria 16120
255 nmdc:mga05p37_51421_c1 3300050507 Bacteria 5067
256 nmdc:mga05p37_65617_c1 3300050507 Bacteria 4465
257 nmdc:mga05p37_68313_c1 3300050507 Bacteria 4370
258 nmdc:mga05p37_696_c1 3300050507 Bacteria 37262
259 nmdc:mga09592_11177_c1 3300050508 Bacteria 7306
260 nmdc:mga09592_1582_c1 3300050508 Bacteria 18325
261 nmdc:mga09592_6558_c1 3300050508 Bacteria 9477
262 nmdc:mga09592_7004_c1 3300050508 Bacteria 9168
263 nmdc:mga0qj67_118_c1 3300050509 Bacteria 52561
264 nmdc:mga0qj67_203_c1 3300050509 Bacteria 40147
265 nmdc:mga0qj67_54173_c1 3300050509 Bacteria 3176
266 nmdc:mga0qj67_87132_c1 3300050509 Bacteria 2505
267 nmdc:mga06r32_3242_c1 3300050510 Bacteria 14554
268 nmdc:mga06r32_3252_c1 3300050510 Bacteria 14536
269 nmdc:mga08y16_1426_c1 3300050511 Bacteria 23980
270 nmdc:mga08y16_3211_c1 3300050511 Bacteria 16912
271 nmdc:mga0n895_18351_c1 3300050512 Bacteria 6470
272 nmdc:mga0n895_77_c1 3300050512 Bacteria 39554
273 nmdc:mga08x19_43626_c1 3300050514 Bacteria 2861
274 nmdc:mga08x19_469_c1 3300050514 Bacteria 27220
275 nmdc:mga0a205_2234_c1 3300050515 Bacteria 17049
276 Ga0500556_0001278 3300053104 Bacteria 11422
277 Ga0500568_0002116 3300053139 Bacteria 11995
278 Ga0500616_0009522 3300053153 Bacteria 5904
279 Ga0501084_0003317 3300054114 Bacteria 13016
280 Ga0501084_0050176 3300054114 Bacteria 3493
281 Ga0501084_0069460 3300054114 Bacteria 2950
282 Ga0501084_0072899 3300054114 Bacteria 2876
283 Ga0501082_0001193 3300060353 Bacteria 22862
284 Ga0501082_0051006 3300060353 Bacteria 3567
285 Ga0501082_0067654 3300060353 Bacteria 3076
286 Ga0530510_0000011 3300061734 Bacteria 125603
287 Ga0530510_0017799 3300061734 Bacteria 5038
288 Ga0530510_0040173 3300061734 Bacteria 3376

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046692 Ga0495671_0030574 Ga0495671_0030574_757_2745 656
2 3300050509 nmdc:mga0qj67_87132_c1 nmdc:mga0qj67_87132_c1_23_2065 679
3 3300049574 Ga0501038_0052820 Ga0501038_0052820_1317_3485 716
4 3300005364 Ga0070673_100032470 Ga0070673_1000324702 728
5 3300025942 Ga0207689_10020410 Ga0207689_100204104 728
6 3300039062 Ga0400483_282241 Ga0400483_282241_49_2298 729
7 3300009147 Ga0114129_10132235 Ga0114129_101322352 733
8 3300050508 nmdc:mga09592_11177_c1 nmdc:mga09592_11177_c1_4602_6806 733
9 3300005459 Ga0068867_100008312 Ga0068867_1000083125 753
10 3300005719 Ga0068861_100017620 Ga0068861_1000176202 753
11 3300006881 Ga0068865_100002472 Ga0068865_1000024721 753
12 3300025923 Ga0207681_10009070 Ga0207681_100090704 753
13 3300025938 Ga0207704_10001029 Ga0207704_100010295 753
14 3300028380 Ga0268265_10040123 Ga0268265_100401232 753
15 3300025940 Ga0207691_10025716 Ga0207691_100257163 759
16 3300037312 Ga0395899_0054576 Ga0395899_0054576_35_2347 761
17 3300036647 Ga0316582_0055598 Ga0316582_0055598_56_2380 764
18 3300037471 Ga0395905_0061674 Ga0395905_0061674_910_3351 767
19 3300038443 Ga0395901_0075853 Ga0395901_0075853_778_3219 767
20 3300005367 Ga0070667_100003382 Ga0070667_1000033824 774
21 3300009093 Ga0105240_10032071 Ga0105240_100320713 774
22 3300026121 Ga0207683_10025975 Ga0207683_100259753 781
23 3300049584 Ga0501068_0006104 Ga0501068_0006104_1917_4349 783
24 3300006871 Ga0075434_100048729 Ga0075434_1000487293 784
25 3300049568 Ga0501031_0009201 Ga0501031_0009201_762_3179 784
26 3300049571 Ga0501034_0000139 Ga0501034_0000139_121689_124103 784
27 3300049574 Ga0501038_0003228 Ga0501038_0003228_309_2726 784
28 3300049575 Ga0501039_0008220 Ga0501039_0008220_5187_7604 784
29 3300049576 Ga0501040_0000583 Ga0501040_0000583_12251_14668 784
30 3300049577 Ga0501041_0006757 Ga0501041_0006757_2880_5297 784
31 3300049578 Ga0501042_0000004 Ga0501042_0000004_49616_52033 784
32 3300049580 Ga0501046_0001914 Ga0501046_0001914_4828_7245 784
33 3300049582 Ga0501048_0025203 Ga0501048_0025203_1511_3928 784
34 3300049584 Ga0501068_0013034 Ga0501068_0013034_2019_4436 784
35 3300049587 Ga0501071_0001212 Ga0501071_0001212_4097_6514 784
36 3300049588 Ga0501072_0006707 Ga0501072_0006707_460_2877 784
37 3300049591 Ga0501075_0012550 Ga0501075_0012550_1843_4260 784
38 3300049592 Ga0501076_0000047 Ga0501076_0000047_26575_28992 784
39 3300049592 Ga0501076_0000595 Ga0501076_0000595_7014_9431 784
40 3300049593 Ga0501077_0000303 Ga0501077_0000303_19127_21544 784
41 3300049741 Ga0501079_0001668 Ga0501079_0001668_878_3295 784
42 3300049742 Ga0501080_0055237 Ga0501080_0055237_999_3416 784
43 3300049743 Ga0501081_0000076 Ga0501081_0000076_6195_8612 784
44 3300049822 Ga0501035_0001844 Ga0501035_0001844_14952_17369 784
45 3300049824 Ga0501045_0011182 Ga0501045_0011182_3838_6255 784
46 3300054114 Ga0501084_0003317 Ga0501084_0003317_9119_11536 784
47 3300061734 Ga0530510_0000011 Ga0530510_0000011_31588_34005 784
48 3300009147 Ga0114129_10004455 Ga0114129_1000445517 785
49 3300050507 nmdc:mga05p37_18133_c1 nmdc:mga05p37_18133_c1_1652_4093 785
50 3300050512 nmdc:mga0n895_18351_c1 nmdc:mga0n895_18351_c1_2555_4996 785
51 3300025939 Ga0207665_10033391 Ga0207665_100333912 788
52 3300031727 Ga0316576_10004968 Ga0316576_100049685 788
53 3300032139 Ga0316580_10000280 Ga0316580_100002804 788
54 3300036712 Ga0316584_0019118 Ga0316584_0019118_1720_4158 788
55 3300046472 Ga0495580_0003259 Ga0495580_0003259_3143_5557 788
56 3300006852 Ga0075433_10086719 Ga0075433_100867192 789
57 iso_pu_bacteria 2898795034 2898798000 789
58 3300006880 Ga0075429_100049590 Ga0075429_1000495902 791
59 3300031730 Ga0307516_10000033 Ga0307516_10000033115 791
60 3300042435 Ga0439434_0000954 Ga0439434_0000954_5105_7480 791
61 3300006173 Ga0070716_100024662 Ga0070716_1000246622 792
62 3300006844 Ga0075428_100018083 Ga0075428_1000180834 792
63 3300006880 Ga0075429_100031094 Ga0075429_1000310942 792
64 3300009147 Ga0114129_10000037 Ga0114129_100000375 792
65 3300050507 nmdc:mga05p37_4607_c1 nmdc:mga05p37_4607_c1_13156_15597 792
66 3300050508 nmdc:mga09592_6558_c1 nmdc:mga09592_6558_c1_2390_4831 792
67 3300061734 Ga0530510_0040173 Ga0530510_0040173_633_3062 792
68 3300049584 Ga0501068_0026170 Ga0501068_0026170_31_2469 793
69 iso_pu_bacteria 2840878972 2840883589 793
70 3300005536 Ga0070697_100025518 Ga0070697_1000255182 794
71 3300006871 Ga0075434_100077973 Ga0075434_1000779732 794
72 3300031852 Ga0307410_10051336 Ga0307410_100513362 794
73 3300031995 Ga0307409_100043048 Ga0307409_1000430482 794
74 3300032002 Ga0307416_100000099 Ga0307416_1000000999 794
75 3300032126 Ga0307415_100000074 Ga0307415_10000007417 794
76 3300036647 Ga0316582_0005632 Ga0316582_0005632_2093_4492 794
77 3300005445 Ga0070708_100014313 Ga0070708_1000143137 795
78 3300006880 Ga0075429_100025240 Ga0075429_1000252402 795
79 3300009147 Ga0114129_10024498 Ga0114129_100244985 795
80 3300037418 Ga0395900_0001478 Ga0395900_0001478_8188_10629 795
81 3300037466 Ga0395898_0014038 Ga0395898_0014038_1437_3878 795
82 3300050507 nmdc:mga05p37_17321_c1 nmdc:mga05p37_17321_c1_5784_8225 795
83 3300006844 Ga0075428_100017943 Ga0075428_1000179436 796
84 3300006846 Ga0075430_100036454 Ga0075430_1000364543 796
85 3300050509 nmdc:mga0qj67_54173_c1 nmdc:mga0qj67_54173_c1_408_2849 796
86 3300005548 Ga0070665_100043264 Ga0070665_1000432641 797
87 3300005841 Ga0068863_100041909 Ga0068863_1000419093 797
88 3300005842 Ga0068858_100009218 Ga0068858_1000092183 797
89 3300005843 Ga0068860_100000129 Ga0068860_10000012993 797
90 3300009094 Ga0111539_10000633 Ga0111539_100006338 797
91 3300026035 Ga0207703_10023899 Ga0207703_100238993 797
92 3300026088 Ga0207641_10003768 Ga0207641_1000376811 797
93 3300028379 Ga0268266_10000654 Ga0268266_1000065411 797
94 3300028381 Ga0268264_10000196 Ga0268264_1000019691 797
95 3300049588 Ga0501072_0024375 Ga0501072_0024375_1602_4040 797
96 3300049591 Ga0501075_0007879 Ga0501075_0007879_2231_4669 797
97 3300049592 Ga0501076_0022857 Ga0501076_0022857_2353_4791 797
98 3300049741 Ga0501079_0003345 Ga0501079_0003345_271_2709 797
99 3300049743 Ga0501081_0013659 Ga0501081_0013659_2196_4634 797
100 3300050511 nmdc:mga08y16_3211_c1 nmdc:mga08y16_3211_c1_95_2533 797
101 3300054114 Ga0501084_0069460 Ga0501084_0069460_69_2507 797
102 3300061734 Ga0530510_0017799 Ga0530510_0017799_1888_4326 797
103 3300005985 Ga0081539_10000002 Ga0081539_10000002278 798
104 3300006852 Ga0075433_10000033 Ga0075433_1000003322 798
105 3300006871 Ga0075434_100003493 Ga0075434_1000034936 798
106 3300009147 Ga0114129_10001512 Ga0114129_100015129 798
107 3300039437 Ga0436365_1841312 Ga0436365_1841312_2862_5309 798
108 3300049570 Ga0501033_0045066 Ga0501033_0045066_367_2805 798
109 3300049574 Ga0501038_0023573 Ga0501038_0023573_2715_5153 798
110 3300049578 Ga0501042_0007187 Ga0501042_0007187_2679_5117 798
111 3300049591 Ga0501075_0005822 Ga0501075_0005822_4873_7311 798
112 3300049741 Ga0501079_0004724 Ga0501079_0004724_2550_4988 798
113 3300049742 Ga0501080_0020318 Ga0501080_0020318_289_2727 798
114 3300050507 nmdc:mga05p37_696_c1 nmdc:mga05p37_696_c1_19818_22259 798
115 3300050512 nmdc:mga0n895_77_c1 nmdc:mga0n895_77_c1_3509_5950 798
116 3300050514 nmdc:mga08x19_469_c1 nmdc:mga08x19_469_c1_12112_14553 798
117 3300053104 Ga0500556_0001278 Ga0500556_0001278_6464_8878 798
118 3300060353 Ga0501082_0001193 Ga0501082_0001193_1813_4251 798
119 3300005367 Ga0070667_100000028 Ga0070667_100000028128 799
120 3300005617 Ga0068859_100038574 Ga0068859_1000385742 799
121 3300005841 Ga0068863_100098399 Ga0068863_1000983991 799
122 3300006931 Ga0097620_100038574 Ga0097620_1000385742 799
123 3300009093 Ga0105240_10008239 Ga0105240_100082393 799
124 3300009093 Ga0105240_10009415 Ga0105240_100094153 799
125 3300009093 Ga0105240_10025277 Ga0105240_100252775 799
126 3300009101 Ga0105247_10001191 Ga0105247_1000119115 799
127 3300014325 Ga0163163_10093804 Ga0163163_100938042 799
128 3300025913 Ga0207695_10042885 Ga0207695_100428853 799
129 3300025933 Ga0207706_10076472 Ga0207706_100764722 799
130 3300025986 Ga0207658_10000718 Ga0207658_1000071812 799
131 3300028379 Ga0268266_10032386 Ga0268266_100323862 799
132 3300037853 Ga0436364_0180103 Ga0436364_0180103_1389_3851 799
133 3300048919 Ga0496116_0012581 Ga0496116_0012581_1664_4081 799
134 3300048920 Ga0496117_0000290 Ga0496117_0000290_9036_11453 799
135 3300048921 Ga0496118_0000064 Ga0496118_0000064_131870_134287 799
136 3300048928 Ga0496125_0004753 Ga0496125_0004753_3315_5732 799
137 3300049572 Ga0501036_0007828 Ga0501036_0007828_952_3369 799
138 3300049575 Ga0501039_0015182 Ga0501039_0015182_2303_4720 799
139 3300049576 Ga0501040_0024584 Ga0501040_0024584_1463_3913 799
140 3300049578 Ga0501042_0027053 Ga0501042_0027053_448_2865 799
141 3300049584 Ga0501068_0009806 Ga0501068_0009806_1710_4148 799
142 3300049741 Ga0501079_0041002 Ga0501079_0041002_24_2474 799
143 iso_pu_bacteria 2824773399 2824781041 799
144 3300005468 Ga0070707_100056565 Ga0070707_1000565652 800
145 3300006028 Ga0070717_10006908 Ga0070717_100069086 800
146 3300006173 Ga0070716_100014442 Ga0070716_1000144422 800
147 3300025929 Ga0207664_10013253 Ga0207664_100132532 800
148 3300026078 Ga0207702_10035675 Ga0207702_100356752 800
149 3300026116 Ga0207674_10095955 Ga0207674_100959551 800
150 3300045051 Ga0451576_0001229 Ga0451576_0001229_40515_42959 800
151 3300049588 Ga0501072_0007143 Ga0501072_0007143_680_3097 800
152 3300005329 Ga0070683_100000652 Ga0070683_10000065213 801
153 3300005535 Ga0070684_100001124 Ga0070684_1000011245 801
154 3300025944 Ga0207661_10000358 Ga0207661_1000035829 801
155 3300031595 Ga0265313_10002827 Ga0265313_100028276 801
156 3300031712 Ga0265342_10014702 Ga0265342_100147024 801
157 3300032133 Ga0316583_10002643 Ga0316583_100026432 801
158 3300049589 Ga0501073_0005136 Ga0501073_0005136_5018_7519 801
159 3300007788 Ga0099795_10000031 Ga0099795_1000003128 802
160 3300010159 Ga0099796_10000003 Ga0099796_1000000312 802
161 3300027512 Ga0209179_1000014 Ga0209179_100001426 802
162 3300037068 Ga0373925_0000343 Ga0373925_0000343_19451_21874 802
163 3300046491 Ga0495584_0000990 Ga0495584_0000990_7997_10426 802
164 3300050507 nmdc:mga05p37_37434_c1 nmdc:mga05p37_37434_c1_3156_5564 802
165 3300005367 Ga0070667_100016284 Ga0070667_1000162841 803
166 3300005546 Ga0070696_100000305 Ga0070696_10000030517 803
167 3300005548 Ga0070665_100006720 Ga0070665_1000067204 803
168 3300005841 Ga0068863_100042780 Ga0068863_1000427802 803
169 3300005843 Ga0068860_100003641 Ga0068860_10000364111 803
170 3300006028 Ga0070717_10024315 Ga0070717_100243151 803
171 3300006237 Ga0097621_100026123 Ga0097621_1000261232 803
172 3300009098 Ga0105245_10021622 Ga0105245_100216224 803
173 3300013296 Ga0157374_10036557 Ga0157374_100365572 803
174 3300014325 Ga0163163_10018337 Ga0163163_100183374 803
175 3300014968 Ga0157379_10011751 Ga0157379_100117512 803
176 3300014969 Ga0157376_10005056 Ga0157376_100050567 803
177 3300025929 Ga0207664_10033131 Ga0207664_100331312 803
178 3300025931 Ga0207644_10025666 Ga0207644_100256661 803
179 3300031507 Ga0307509_10000036 Ga0307509_1000003635 803
180 3300048911 Ga0496108_0008898 Ga0496108_0008898_4895_7354 803
181 3300049575 Ga0501039_0028469 Ga0501039_0028469_327_2774 803
182 3300049592 Ga0501076_0024110 Ga0501076_0024110_1020_3461 803
183 3300049824 Ga0501045_0050442 Ga0501045_0050442_149_2590 803
184 3300054114 Ga0501084_0050176 Ga0501084_0050176_521_2932 803
185 3300013102 Ga0157371_10001143 Ga0157371_1000114322 805
186 3300039437 Ga0436365_0761686 Ga0436365_0761686_612_3068 805
187 3300053139 Ga0500568_0002116 Ga0500568_0002116_3048_5498 805
188 3300013102 Ga0157371_10000862 Ga0157371_100008627 806
189 3300006847 Ga0075431_100076603 Ga0075431_1000766031 807
190 3300021388 Ga0213875_10001436 Ga0213875_100014364 807
191 3300037853 Ga0436364_0586291 Ga0436364_0586291_80220_82643 807
192 iso_pu_bacteria 2883291878 2883295114 807
193 iso_pu_bacteria 2883354860 2883356414 807
194 3300006844 Ga0075428_100030500 Ga0075428_1000305001 808
195 3300006846 Ga0075430_100000047 Ga0075430_10000004743 808
196 3300006847 Ga0075431_100000424 Ga0075431_10000042413 808
197 3300006852 Ga0075433_10005047 Ga0075433_100050474 808
198 3300009094 Ga0111539_10130756 Ga0111539_101307562 808
199 3300021320 Ga0214544_1000012 Ga0214544_1000012206 808
200 3300021321 Ga0214542_1000011 Ga0214542_1000011198 808
201 3300021327 Ga0214543_1000004 Ga0214543_1000004302 808
202 3300050507 nmdc:mga05p37_34159_c1 nmdc:mga05p37_34159_c1_632_3073 808
203 3300050509 nmdc:mga0qj67_203_c1 nmdc:mga0qj67_203_c1_36983_39424 808
204 iso_pu_bacteria 2898795034 2898797572 808
205 iso_pu_bacteria 2902792274 2902796315 808
206 3300005468 Ga0070707_100024875 Ga0070707_1000248754 809
207 3300025922 Ga0207646_10023351 Ga0207646_100233512 809
208 iso_pu_bacteria 2643221627 2644155401 809
209 iso_pu_bacteria 2756170246 2756676640 809
210 iso_pu_bacteria 2847670302 2847670558 809
211 iso_pu_bacteria 2876392853 2876394316 809
212 iso_pu_bacteria 2904659560 2904661033 809
213 iso_pu_bacteria 2961114664 2961116107 809
214 iso_pu_bacteria 2968110612 2968112090 809
215 iso_pu_bacteria 8005430974 8005431753 809
216 3300005331 Ga0070670_100000048 Ga0070670_10000004835 810
217 3300025925 Ga0207650_10000187 Ga0207650_1000018732 810
218 iso_pu_bacteria 2513237092 2513627967 810
219 iso_pu_bacteria 2545555834 2545676594 810
220 iso_pu_bacteria 2824653114 2824658572 810
221 iso_pu_bacteria 2935819856 2935827802 810
222 iso_pu_bacteria 2935847175 2935855104 810
223 iso_pu_bacteria 2935864058 2935872493 810
224 iso_pu_bacteria 2935992306 2936001543 810
225 iso_pu_bacteria 2936055302 2936063809 810
226 iso_pu_bacteria 2941531003 2941537507 810
227 iso_pu_bacteria 641522639 641644031 810
228 iso_pu_bacteria 8006964411 8006971980 810
229 iso_pu_bacteria 2513237092 2513629354 811
230 iso_pu_bacteria 2932784394 2932792833 811
231 iso_pu_bacteria 2935819856 2935827805 811
232 iso_pu_bacteria 2935847175 2935855107 811
233 iso_pu_bacteria 2935959822 2935967425 811
234 iso_pu_bacteria 2936055302 2936063239 811
235 iso_pu_bacteria 8006964411 8006971996 811
236 iso_pu_bacteria 8019586578 8019593470 811
237 3300006847 Ga0075431_100019658 Ga0075431_1000196587 812
238 3300006880 Ga0075429_100016365 Ga0075429_1000163653 812
239 3300025272 Ga0209455_1000693 Ga0209455_100069313 812
240 3300050507 nmdc:mga05p37_51421_c1 nmdc:mga05p37_51421_c1_307_2745 812
241 iso_pu_bacteria 2511231012 2511303710 812
242 iso_pu_bacteria 2738543004 2739197256 812
243 iso_pu_bacteria 8019775933 8019781274 812
244 3300006846 Ga0075430_100000064 Ga0075430_10000006449 813
245 3300006852 Ga0075433_10062162 Ga0075433_100621623 813
246 3300021377 Ga0213874_10005245 Ga0213874_100052452 813
247 3300021384 Ga0213876_10001244 Ga0213876_100012443 813
248 3300031344 Ga0265316_10025869 Ga0265316_100258694 813
249 3300039437 Ga0436365_0619646 Ga0436365_0619646_2805_5285 813
250 3300048907 Ga0496104_0022345 Ga0496104_0022345_891_3365 813
251 3300048918 Ga0496115_0044820 Ga0496115_0044820_204_2678 813
252 3300049571 Ga0501034_0000372 Ga0501034_0000372_36703_39153 813
253 3300050507 nmdc:mga05p37_68313_c1 nmdc:mga05p37_68313_c1_896_3337 813
254 3300050508 nmdc:mga09592_7004_c1 nmdc:mga09592_7004_c1_609_3050 813
255 3300050509 nmdc:mga0qj67_118_c1 nmdc:mga0qj67_118_c1_5062_7503 813
256 3300050510 nmdc:mga06r32_3252_c1 nmdc:mga06r32_3252_c1_613_3054 813
257 3300054114 Ga0501084_0072899 Ga0501084_0072899_245_2686 813
258 3300005343 Ga0070687_100018841 Ga0070687_1000188412 814
259 3300005458 Ga0070681_10025032 Ga0070681_100250323 814
260 3300005459 Ga0068867_100008809 Ga0068867_1000088092 814
261 3300005937 Ga0081455_10002563 Ga0081455_100025633 814
262 3300006852 Ga0075433_10050039 Ga0075433_100500392 814
263 3300006880 Ga0075429_100022124 Ga0075429_1000221244 814
264 3300006914 Ga0075436_100052350 Ga0075436_1000523502 814
265 3300007265 Ga0099794_10002885 Ga0099794_100028853 814
266 3300009094 Ga0111539_10001744 Ga0111539_1000174424 814
267 3300009147 Ga0114129_10002758 Ga0114129_100027583 814
268 3300009148 Ga0105243_10038422 Ga0105243_100384222 814
269 3300013297 Ga0157378_10004127 Ga0157378_100041278 814
270 3300025910 Ga0207684_10016108 Ga0207684_100161082 814
271 3300025922 Ga0207646_10080040 Ga0207646_100800401 814
272 3300026089 Ga0207648_10001906 Ga0207648_100019067 814
273 3300026118 Ga0207675_100102404 Ga0207675_1001024041 814
274 3300027907 Ga0207428_10000029 Ga0207428_10000029177 814
275 3300039450 Ga0436363_1233784 Ga0436363_1233784_1207_3666 814
276 3300048907 Ga0496104_0037507 Ga0496104_0037507_1162_3609 814
277 3300048917 Ga0496114_0039077 Ga0496114_0039077_665_3112 814
278 3300049586 Ga0501070_0017522 Ga0501070_0017522_1873_4329 814
279 3300049742 Ga0501080_0026798 Ga0501080_0026798_2124_4580 814
280 3300050508 nmdc:mga09592_1582_c1 nmdc:mga09592_1582_c1_1057_3501 814
281 3300050511 nmdc:mga08y16_1426_c1 nmdc:mga08y16_1426_c1_11608_14052 814
282 3300050514 nmdc:mga08x19_43626_c1 nmdc:mga08x19_43626_c1_249_2693 814
283 3300050515 nmdc:mga0a205_2234_c1 nmdc:mga0a205_2234_c1_14134_16578 814
284 3300053153 Ga0500616_0009522 Ga0500616_0009522_2859_5309 814
285 3300060353 Ga0501082_0051006 Ga0501082_0051006_963_3419 814
286 3300005937 Ga0081455_10016510 Ga0081455_100165106 815
287 3300005985 Ga0081539_10000539 Ga0081539_1000053912 815
288 3300006847 Ga0075431_100005104 Ga0075431_10000510410 815
289 3300006847 Ga0075431_100007188 Ga0075431_1000071883 815
290 3300009147 Ga0114129_10000923 Ga0114129_1000092334 815
291 3300009147 Ga0114129_10042533 Ga0114129_100425337 815
292 3300025913 Ga0207695_10037212 Ga0207695_100372121 815
293 3300032133 Ga0316583_10009041 Ga0316583_100090411 815
294 3300037418 Ga0395900_0005185 Ga0395900_0005185_7844_10330 815
295 3300037466 Ga0395898_0013898 Ga0395898_0013898_3344_5830 815
296 3300038443 Ga0395901_0006599 Ga0395901_0006599_7917_10403 815
297 3300049576 Ga0501040_0040840 Ga0501040_0040840_450_2912 815
298 3300049577 Ga0501041_0023115 Ga0501041_0023115_1051_3513 815
299 3300049582 Ga0501048_0034765 Ga0501048_0034765_167_2629 815
300 3300049591 Ga0501075_0002100 Ga0501075_0002100_468_2930 815
301 3300049592 Ga0501076_0015354 Ga0501076_0015354_2676_5138 815
302 3300049824 Ga0501045_0003578 Ga0501045_0003578_5721_8183 815
303 3300050507 nmdc:mga05p37_23333_c1 nmdc:mga05p37_23333_c1_3753_6215 815
304 3300050507 nmdc:mga05p37_65617_c1 nmdc:mga05p37_65617_c1_1195_3654 815
305 3300050510 nmdc:mga06r32_3242_c1 nmdc:mga06r32_3242_c1_2335_4797 815
306 3300060353 Ga0501082_0067654 Ga0501082_0067654_156_2618 815
307 3300005290 Ga0065712_10067942 Ga0065712_100679425 816
308 3300006058 Ga0075432_10001422 Ga0075432_100014225 816
309 3300009036 Ga0105244_10002538 Ga0105244_1000253811 816
310 3300025728 Ga0207655_1000806 Ga0207655_100080613 816
311 3300027907 Ga0207428_10035112 Ga0207428_100351122 816
312 3300041411 Ga0439466_0001070 Ga0439466_0001070_5500_7950 816
313 3300046507 Ga0495606_0000389 Ga0495606_0000389_6832_9282 816
314 3300046526 Ga0495666_0000960 Ga0495666_0000960_9899_12349 816
315 3300046530 Ga0495654_0000345 Ga0495654_0000345_22779_25229 816
316 3300046538 Ga0495609_0000048 Ga0495609_0000048_38864_41350 816
317 3300046660 Ga0495625_0002091 Ga0495625_0002091_18740_21226 816
318 3300046694 Ga0495649_0000568 Ga0495649_0000568_13770_16220 816
319 3300046810 Ga0495660_0000287 Ga0495660_0000287_34935_37385 816
320 3300048920 Ga0496117_0000933 Ga0496117_0000933_30679_33129 816
321 3300048921 Ga0496118_0000999 Ga0496118_0000999_30008_32458 816
322 3300048924 Ga0496121_0001238 Ga0496121_0001238_30174_32624 816
323 3300048924 Ga0496121_0001337 Ga0496121_0001337_24780_27230 816
324 3300048928 Ga0496125_0000975 Ga0496125_0000975_11716_14166 816
325 3300049460 Ga0495682_0000097 Ga0495682_0000097_20608_23094 816

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01571

GCV_T

Aminomethyltransferase folate-binding domain

483

755

0.99

PF16350

FAO_M

FAD dependent oxidoreductase central domain

426

481

0.99

PF08669

GCV_T_C

Glycine cleavage T-protein C-terminal barrel domain

780

860

0.95

PF01266

DAO

FAD dependent oxidoreductase

67

423

0.92

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

70

134

0.85

PF00890

FAD_binding_2

FAD binding domain

67

288

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
1woo-assembly1.cif.gz_A crystal structure of t-protein of the glycine cleavage system 0.953 423 807
5l46-assembly1.cif.gz_A crystal structure of human dimethylglycine-dehydrogenase 0.9488 5 812
4paa-assembly2.cif.gz_B crystal structure of the mature form of rat dmgdh complexed with tetrahydrofolate 0.9476 5 815
5l46-assembly1.cif.gz_A crystal structure of human dimethylglycine-dehydrogenase 0.9465 5 812
4pab-assembly2.cif.gz_B crystal structure of the precursor form of rat dmgdh complexed with tetrahydrofolate 0.9461 5 815
ID Description Score Start End Superfamily
af_Q99LB7_820_902_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9545 721 799 2.40.30.110
4paaA04 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Aminomethyltransferase beta-barrel domains 0.9545 491 718 3.30.70.1400
af_A1ZAZ2_787_869_2.40.30.110 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Aminomethyltransferase beta-barrel domains 0.9529 721 799 2.40.30.110
4paaA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9527 5 412 3.50.50.60
1yx2B01 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9497 423 675 3.30.1360.120
ID Description Score Start End GO Terms
AF-A0A435LID8-F1-model_v4 deleted 0.9908 326 659
AF-A0A522R8C7-F1-model_v4 FAD-binding oxidoreductase 0.9875 5 154 GO:0005737
AF-A0A258CYY7-F1-model_v4 FAD-dependent oxidoreductase 0.9872 169 589
AF-A0A7C4XX63-F1-model_v4 FAD-dependent oxidoreductase 0.9871 2 816
AF-A0A0S7FJJ4-F1-model_v4 deleted 0.9862 4 238

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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