F407882

General Info

Members Datasets Scaffolds Average Seq Length
325 180 651 451

Family's Representative Sequence

Representative Sequence 3300026095|Ga0207676_10145190|Ga0207676_101451902
Length 438
Sequence MGNRNVNRRNFLRTTSATLALSALKVNGVSASYKPPTRKVALIGTGWYGKSDLFRLMQVASVEVVALCDVDKHQLQHAADIVAQKQNNKQPKLYTDYRKLLDEQKPEIVLVGTPDHWHALIAIEAIKLGAHVYVQKPISVDVIEGEAMVAAARKYNRVVQVGTQRRSTPHLVDAKKNIIDAGLLGKVAHVEMCPDFFDYDMWTGPAPLRPYDGLPHVRWWRAFMEYGNGIMGDMCIHMFDAVRWMLRLGWPKRISSTGGIYVDKNGKSNITDTQSALFEYDSLNCVWQHRTWGTPADPEYPWSFKIYGEKGTLCASTMEYDFIPEGKGDKIHKDVVYEKEKYPEDLKEPDIELNAAPATRAHMLDFLDAIDKNTKPVATIEEGHISTASCIIANLSMKLGRPLSYDPLKREISGDAEATKLLQREYRQPWVHPHPDNV

Samples

Sample ID Description Type Environment
1 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
46 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
47 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
48 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
49 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
50 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
83 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
120 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
127 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
128 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
129 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
132 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
136 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
137 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
147 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
148 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
149 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
150 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
151 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
152 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
153 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
154 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
155 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
156 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
157 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
158 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
159 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
172 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
173 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
174 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
175 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
176 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
177 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
178 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
179 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
180 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.92
Metatranscriptomes 0
Isolates 3.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.23
Nodule 0
Rhizoplane 1.85
Rhizosphere 91.08
Stem 0
Stem Tuber 0
Unclassified 8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207676_10145190 3300026095 Bacteria 2037
2 rootH1_10000580 3300003316 Bacteria 11589
3 rootH1_10000580 3300003323 Bacteria 29296
4 rootL2_10084027 3300003322 Bacteria 3979
5 rootH1_10165135 3300003323 Bacteria 3654
6 JGI25160J50197_1006192 3300003354 Bacteria 4869
7 Ga0065165_1000285 3300005262 Bacteria 86006
8 Ga0065712_10007417 3300005290 Bacteria 3378
9 Ga0070683_100131274 3300005329 Bacteria 2370
10 Ga0070690_100017118 3300005330 Unclassified 4352
11 Ga0070670_100134768 3300005331 Bacteria 2134
12 Ga0068869_100007362 3300005334 Bacteria 7026
13 Ga0068869_100009352 3300005334 Bacteria 6357
14 Ga0068869_100023860 3300005334 Unclassified 4233
15 Ga0068869_100030358 3300005334 Bacteria 3794
16 Ga0068869_100146311 3300005334 Bacteria 1829
17 Ga0068869_100192434 3300005334 Bacteria 1605
18 Ga0070666_10000152 3300005335 Bacteria 47539
19 Ga0070666_10096196 3300005335 Bacteria 2038
20 Ga0070682_100028480 3300005337 Bacteria 3360
21 Ga0068868_100001980 3300005338 Bacteria 14067
22 Ga0068868_100049123 3300005338 Unclassified 3311
23 Ga0070689_100002006 3300005340 Bacteria 13197
24 Ga0070689_100006486 3300005340 Bacteria 8104
25 Ga0070689_100025725 3300005340 Unclassified 4424
26 Ga0070687_100041346 3300005343 Bacteria 2329
27 Ga0070661_100000277 3300005344 Bacteria 41446
28 Ga0070661_100004639 3300005344 Bacteria 9461
29 Ga0070668_100029233 3300005347 Bacteria 4184
30 Ga0070668_100036300 3300005347 Bacteria 3761
31 Ga0070668_100072481 3300005347 Bacteria 2684
32 Ga0070669_100001419 3300005353 Bacteria 17324
33 Ga0070675_100058550 3300005354 Bacteria 3178
34 Ga0070675_100080281 3300005354 Bacteria 2719
35 Ga0070675_100116068 3300005354 Bacteria 2270
36 Ga0070675_100129126 3300005354 Bacteria 2152
37 Ga0070671_100015227 3300005355 Bacteria 6211
38 Ga0070671_100109010 3300005355 Bacteria 2325
39 Ga0070671_100183808 3300005355 Bacteria 1770
40 Ga0070673_100053481 3300005364 Bacteria 3172
41 Ga0070673_100103283 3300005364 Bacteria 2351
42 Ga0070673_100175140 3300005364 Unclassified 1833
43 Ga0070688_100027616 3300005365 Bacteria 3380
44 Ga0070688_100034065 3300005365 Bacteria 3081
45 Ga0070688_100096441 3300005365 Bacteria 1942
46 Ga0070667_100022033 3300005367 Bacteria 5287
47 Ga0070667_100044149 3300005367 Bacteria 3742
48 Ga0070667_100076068 3300005367 Bacteria 2866
49 Ga0070667_100129542 3300005367 Unclassified 2201
50 Ga0070662_100071161 3300005457 Bacteria 2564
51 Ga0070662_100107683 3300005457 Unclassified 2119
52 Ga0070685_10021061 3300005466 Bacteria 3539
53 Ga0070685_10026283 3300005466 Bacteria 3208
54 Ga0070707_100000154 3300005468 Bacteria 66616
55 Ga0070698_100007300 3300005471 Bacteria 11966
56 Ga0070698_100061398 3300005471 Bacteria 3793
57 Ga0070699_100058001 3300005518 Bacteria 3353
58 Ga0070684_100015179 3300005535 Bacteria 6264
59 Ga0070672_100032424 3300005543 Bacteria 3942
60 Ga0070665_100082707 3300005548 Bacteria 3216
61 Ga0070665_100134954 3300005548 Bacteria 2470
62 Ga0070664_100006492 3300005564 Bacteria 9428
63 Ga0070664_100032734 3300005564 Bacteria 4349
64 Ga0070664_100078605 3300005564 Unclassified 2838
65 Ga0070664_100148708 3300005564 Bacteria 2067
66 Ga0068854_100085215 3300005578 Unclassified 2340
67 Ga0068859_100000026 3300005617 Bacteria 188742
68 Ga0068859_100018659 3300005617 Bacteria 6973
69 Ga0068859_100072938 3300005617 Bacteria 3470
70 Ga0068859_100288984 3300005617 Bacteria 1732
71 Ga0068864_100004790 3300005618 Bacteria 11085
72 Ga0068864_100087633 3300005618 Bacteria 2741
73 Ga0068861_100014069 3300005719 Bacteria 5611
74 Ga0068861_100054506 3300005719 Bacteria 3046
75 Ga0068851_10026448 3300005834 Bacteria 2851
76 Ga0068870_10016172 3300005840 Bacteria 3558
77 Ga0068863_100000546 3300005841 Bacteria 38297
78 Ga0068863_100000852 3300005841 Bacteria 30432
79 Ga0068863_100185646 3300005841 Bacteria 1997
80 Ga0068858_100012209 3300005842 Bacteria 8098
81 Ga0068858_100149651 3300005842 Bacteria 2194
82 Ga0068860_100004157 3300005843 Bacteria 14834
83 Ga0068860_100018607 3300005843 Bacteria 6757
84 Ga0068860_100020258 3300005843 Bacteria 6444
85 Ga0068860_100051223 3300005843 Bacteria 3928
86 Ga0068860_100074668 3300005843 Bacteria 3224
87 Ga0068862_100070414 3300005844 Bacteria 3019
88 Ga0068862_100175371 3300005844 Bacteria 1921
89 Ga0081539_10005400 3300005985 Bacteria 13074
90 Ga0075365_10073502 3300006038 Bacteria 2304
91 Ga0075368_10011089 3300006042 Bacteria 3275
92 Ga0075363_100001450 3300006048 Bacteria 8989
93 Ga0075364_10018342 3300006051 Bacteria 4379
94 Ga0075362_10060419 3300006177 Bacteria 1713
95 Ga0075367_10001462 3300006178 Bacteria 10188
96 Ga0075366_10000463 3300006195 Bacteria 18923
97 Ga0097621_100105448 3300006237 Bacteria 2377
98 Ga0097621_100114957 3300006237 Unclassified 2277
99 Ga0075428_100012909 3300006844 Bacteria 9293
100 Ga0075428_100054112 3300006844 Bacteria 4398
101 Ga0075430_100093454 3300006846 Bacteria 2514
102 Ga0075431_100042795 3300006847 Bacteria 4672
103 Ga0075433_10076569 3300006852 Bacteria 2946
104 Ga0075429_100016453 3300006880 Bacteria 6409
105 Ga0068865_100018429 3300006881 Bacteria 4504
106 Ga0097620_100000026 3300006931 Bacteria 188742
107 Ga0097620_100018659 3300006931 Bacteria 6973
108 Ga0097620_100072933 3300006931 Bacteria 3470
109 Ga0097620_100288980 3300006931 Bacteria 1732
110 Ga0075435_100020617 3300007076 Bacteria 5056
111 Ga0105240_10003532 3300009093 Bacteria 24250
112 Ga0105240_10017724 3300009093 Bacteria 9589
113 Ga0111539_10000194 3300009094 Bacteria 71319
114 Ga0111539_10007515 3300009094 Bacteria 13941
115 Ga0111539_10019515 3300009094 Bacteria 8364
116 Ga0114129_10212992 3300009147 Bacteria 2611
117 Ga0114129_10445649 3300009147 Bacteria 1699
118 Ga0105241_10005800 3300009174 Bacteria 9117
119 Ga0105241_10092357 3300009174 Unclassified 2390
120 Ga0105241_10099169 3300009174 Bacteria 2313
121 Ga0105242_10006627 3300009176 Bacteria 8928
122 Ga0105242_10058769 3300009176 Bacteria 3154
123 Ga0105242_10067649 3300009176 Bacteria 2954
124 Ga0105237_10001479 3300009545 Bacteria 30952
125 Ga0105237_10028997 3300009545 Bacteria 5629
126 Ga0105249_10000998 3300009553 Bacteria 25094
127 Ga0105249_10002465 3300009553 Bacteria 16041
128 Ga0105249_10004058 3300009553 Bacteria 12626
129 Ga0105249_10008993 3300009553 Bacteria 8727
130 Ga0105249_10023036 3300009553 Bacteria 5583
131 Ga0105239_10026401 3300010375 Bacteria 6391
132 Ga0105239_10090167 3300010375 Bacteria 3382
133 Ga0105246_10031769 3300011119 Bacteria 3496
134 Ga0105246_10076311 3300011119 Unclassified 2375
135 Ga0157370_10133192 3300013104 Bacteria 2318
136 Ga0157374_10003037 3300013296 Bacteria 14072
137 Ga0157374_10010596 3300013296 Bacteria 7935
138 Ga0157378_10003686 3300013297 Bacteria 13582
139 Ga0157378_10040502 3300013297 Unclassified 4131
140 Ga0163162_10000098 3300013306 Bacteria 78708
141 Ga0163162_10000254 3300013306 Bacteria 48422
142 Ga0163162_10003821 3300013306 Bacteria 14434
143 Ga0163162_10022108 3300013306 Bacteria 6268
144 Ga0163162_10061372 3300013306 Bacteria 3797
145 Ga0157372_10043147 3300013307 Bacteria 4992
146 Ga0157372_10122161 3300013307 Bacteria 2993
147 Ga0157372_10239249 3300013307 Unclassified 2106
148 Ga0157375_10010252 3300013308 Bacteria 8244
149 Ga0157375_10029419 3300013308 Bacteria 5166
150 Ga0157375_10029788 3300013308 Bacteria 5138
151 Ga0157375_10045873 3300013308 Unclassified 4256
152 Ga0157375_10052195 3300013308 Bacteria 4018
153 Ga0157375_10100837 3300013308 Bacteria 2969
154 Ga0163163_10000348 3300014325 Bacteria 44508
155 Ga0163163_10042209 3300014325 Unclassified 4466
156 Ga0157380_10004511 3300014326 Bacteria 9656
157 Ga0157380_10004982 3300014326 Bacteria 9250
158 Ga0157380_10066853 3300014326 Bacteria 2893
159 Ga0157380_10129844 3300014326 Bacteria 2148
160 Ga0157380_10144368 3300014326 Bacteria 2049
161 Ga0157377_10005679 3300014745 Bacteria 5880
162 Ga0157377_10013304 3300014745 Bacteria 4163
163 Ga0157379_10066138 3300014968 Unclassified 3231
164 Ga0157376_10001745 3300014969 Bacteria 14468
165 Ga0157376_10005930 3300014969 Bacteria 8579
166 Ga0157376_10125789 3300014969 Bacteria 2280
167 Ga0163161_10003647 3300017792 Bacteria 10799
168 Ga0209436_101904 3300025208 Bacteria 6729
169 Ga0209130_1001441 3300025284 Bacteria 15752
170 Ga0209676_1000348 3300025292 Bacteria 87619
171 Ga0207426_1000002 3300025302 Bacteria 1249660
172 Ga0207426_1000135 3300025302 Bacteria 202216
173 Ga0207642_10050463 3300025899 Bacteria 1877
174 Ga0207688_10013052 3300025901 Bacteria 4517
175 Ga0207680_10000200 3300025903 Bacteria 28917
176 Ga0207680_10062541 3300025903 Bacteria 2275
177 Ga0207647_10032023 3300025904 Bacteria 3381
178 Ga0207643_10056949 3300025908 Bacteria 2224
179 Ga0207643_10071038 3300025908 Bacteria 2003
180 Ga0207654_10020948 3300025911 Bacteria 3472
181 Ga0207654_10105001 3300025911 Unclassified 1747
182 Ga0207695_10000585 3300025913 Bacteria 73614
183 Ga0207695_10070204 3300025913 Bacteria 3582
184 Ga0207671_10001207 3300025914 Bacteria 30708
185 Ga0207671_10062200 3300025914 Bacteria 2772
186 Ga0207671_10181127 3300025914 Bacteria 1640
187 Ga0207662_10000697 3300025918 Bacteria 15325
188 Ga0207681_10016487 3300025923 Bacteria 4623
189 Ga0207681_10089065 3300025923 Bacteria 2199
190 Ga0207650_10035910 3300025925 Bacteria 3603
191 Ga0207650_10070822 3300025925 Bacteria 2622
192 Ga0207644_10026203 3300025931 Bacteria 4015
193 Ga0207644_10049891 3300025931 Bacteria 2998
194 Ga0207706_10006070 3300025933 Bacteria 11226
195 Ga0207706_10034838 3300025933 Bacteria 4478
196 Ga0207706_10046332 3300025933 Bacteria 3850
197 Ga0207706_10092667 3300025933 Bacteria 2657
198 Ga0207670_10004033 3300025936 Bacteria 7851
199 Ga0207704_10102679 3300025938 Bacteria 1910
200 Ga0207691_10029610 3300025940 Bacteria 5121
201 Ga0207691_10034370 3300025940 Bacteria 4714
202 Ga0207691_10097250 3300025940 Bacteria 2631
203 Ga0207711_10108974 3300025941 Bacteria 2460
204 Ga0207689_10000918 3300025942 Bacteria 28286
205 Ga0207689_10001574 3300025942 Bacteria 21618
206 Ga0207689_10006835 3300025942 Bacteria 10032
207 Ga0207689_10014713 3300025942 Bacteria 6644
208 Ga0207689_10074045 3300025942 Unclassified 2798
209 Ga0207689_10132457 3300025942 Bacteria 2052
210 Ga0207661_10009475 3300025944 Bacteria 6985
211 Ga0207661_10013205 3300025944 Bacteria 6031
212 Ga0207661_10041635 3300025944 Bacteria 3617
213 Ga0207661_10048607 3300025944 Bacteria 3373
214 Ga0207679_10002203 3300025945 Bacteria 12041
215 Ga0207679_10004899 3300025945 Bacteria 8345
216 Ga0207679_10041791 3300025945 Bacteria 3290
217 Ga0207679_10081784 3300025945 Unclassified 2471
218 Ga0207651_10012179 3300025960 Bacteria 4853
219 Ga0207651_10079928 3300025960 Bacteria 2351
220 Ga0207651_10131173 3300025960 Unclassified 1919
221 Ga0207712_10000871 3300025961 Bacteria 21972
222 Ga0207712_10021610 3300025961 Bacteria 4225
223 Ga0207712_10023162 3300025961 Bacteria 4096
224 Ga0207712_10135690 3300025961 Bacteria 1881
225 Ga0207668_10119338 3300025972 Bacteria 1994
226 Ga0207658_10032018 3300025986 Bacteria 3739
227 Ga0207658_10045380 3300025986 Bacteria 3203
228 Ga0207677_10004257 3300026023 Bacteria 7653
229 Ga0207677_10057412 3300026023 Bacteria 2673
230 Ga0207677_10113427 3300026023 Unclassified 2023
231 Ga0207703_10095848 3300026035 Bacteria 2504
232 Ga0207703_10114369 3300026035 Bacteria 2307
233 Ga0207678_10044595 3300026067 Bacteria 3835
234 Ga0207708_10083327 3300026075 Bacteria 2458
235 Ga0207708_10157789 3300026075 Bacteria 1790
236 Ga0207641_10000215 3300026088 Bacteria 74812
237 Ga0207641_10000539 3300026088 Bacteria 42499
238 Ga0207641_10291980 3300026088 Bacteria 1537
239 Ga0207648_10050593 3300026089 Unclassified 3633
240 Ga0207676_10001245 3300026095 Bacteria 18955
241 Ga0207676_10066289 3300026095 Bacteria 2879
242 Ga0207676_10087213 3300026095 Bacteria 2552
243 Ga0207674_10032479 3300026116 Bacteria 5475
244 Ga0207674_10039335 3300026116 Bacteria 4903
245 Ga0207675_100003606 3300026118 Bacteria 15086
246 Ga0207675_100031437 3300026118 Bacteria 4945
247 Ga0207698_10020896 3300026142 Bacteria 4517
248 Ga0207428_10000365 3300027907 Bacteria 58330
249 Ga0268266_10076989 3300028379 Bacteria 2900
250 Ga0268265_10037786 3300028380 Bacteria 3546
251 Ga0268265_10076557 3300028380 Bacteria 2625
252 Ga0268264_10000801 3300028381 Bacteria 33940
253 Ga0268264_10013359 3300028381 Bacteria 6757
254 Ga0268264_10014368 3300028381 Bacteria 6509
255 Ga0268264_10043845 3300028381 Bacteria 3708
256 Ga0307405_10005559 3300031731 Bacteria 6092
257 Ga0307413_10027728 3300031824 Bacteria 3144
258 Ga0307416_100002812 3300032002 Bacteria 10117
259 Ga0307414_10000069 3300032004 Bacteria 98243
260 Ga0307415_100011464 3300032126 Bacteria 5075
261 Ga0373947_0169826 3300035725 Bacteria 1415
262 Ga0439441_005197 3300042001 Bacteria 2009
263 Ga0451577_0050065 3300042876 Bacteria 3729
264 Ga0451577_0146095 3300042876 Bacteria 2126
265 Ga0466972_0003123 3300044658 Bacteria 8223
266 Ga0453683_0104258 3300044673 Bacteria 1781
267 Ga0453684_0000010 3300044712 Bacteria 1133422
268 Ga0453684_0002756 3300044712 Bacteria 41615
269 Ga0453684_0006867 3300044712 Bacteria 21373
270 Ga0453684_0225114 3300044712 Bacteria 2170
271 Ga0451576_0027772 3300045051 Bacteria 6075
272 Ga0495653_0119320 3300046463 Unclassified 1883
273 Ga0495643_0042837 3300046522 Unclassified 2465
274 Ga0495586_0003088 3300046535 Bacteria 8974
275 Ga0495634_0054073 3300046642 Bacteria 2688
276 Ga0495634_0134494 3300046642 Bacteria 1574
277 Ga0495672_0110205 3300047320 Bacteria 1478
278 Ga0496104_0006320 3300048907 Bacteria 10421
279 Ga0496109_0291247 3300048912 Bacteria 1539
280 Ga0496110_0059631 3300048913 Bacteria 3365
281 Ga0496110_0104385 3300048913 Bacteria 2542
282 Ga0496111_0100108 3300048914 Bacteria 2129
283 Ga0496115_0020562 3300048918 Bacteria 5093
284 Ga0501047_0046710 3300049581 Bacteria 4185
285 Ga0501070_0097681 3300049586 Bacteria 2429
286 Ga0501201_000099 3300049651 Bacteria 6750
287 Ga0501206_003421 3300049653 Bacteria 2015
288 Ga0501207_000306 3300049654 Bacteria 5220
289 Ga0501217_008421 3300049661 Bacteria 2228
290 Ga0501223_000526 3300049663 Bacteria 9210
291 Ga0501235_006647 3300049669 Bacteria 2518
292 Ga0501243_000376 3300049675 Bacteria 5861
293 Ga0501252_000154 3300049682 Bacteria 4252
294 Ga0501259_000290 3300049688 Bacteria 7926
295 Ga0501261_004513 3300049690 Bacteria 1726
296 Ga0501225_0001751 3300049705 Bacteria 6805
297 Ga0501234_004751 3300049707 Bacteria 2130
298 Ga0501245_000337 3300049708 Bacteria 5599
299 Ga0501080_0138140 3300049742 Bacteria 2254
300 Ga0501035_0082326 3300049822 Bacteria 2840
301 Ga0501035_0237764 3300049822 Bacteria 1550
302 Ga0501044_0000597 3300049823 Bacteria 43761
303 Ga0501044_0001053 3300049823 Bacteria 33150
304 Ga0501044_0084464 3300049823 Bacteria 3209
305 nmdc:mga03683_26006_c1 3300050489 Bacteria 2305
306 nmdc:mga0yw44_2568_c1 3300050492 Bacteria 7797
307 nmdc:mga0k408_881_c1 3300050493 Bacteria 16475
308 nmdc:mga05p37_370991_c1 3300050507 Bacteria 1679
309 nmdc:mga06r32_46401_c1 3300050510 Bacteria 4145
310 nmdc:mga08y16_102650_c1 3300050511 Bacteria 2977
311 nmdc:mga08y16_134801_c1 3300050511 Unclassified 2566
312 nmdc:mga08y16_146702_c1 3300050511 Bacteria 2453
313 nmdc:mga08y16_782_c1 3300050511 Bacteria 30382
314 nmdc:mga08y16_79140_c1 3300050511 Bacteria 3426
315 nmdc:mga0rr50_139663_c1 3300050513 Bacteria 1948
316 nmdc:mga0a205_54925_c1 3300050515 Bacteria 3846
317 2522547752 2522125168 Bacteria 7376607
318 2819678420 2818991460 Bacteria 7595395
319 2889420116 2889415604 Bacteria 8048700
320 2896089170 2896085136 Bacteria 6129793
321 2910248658 2910245624 Bacteria 6935613
322 2911143122 2911138879 Bacteria 5811561
323 2919696147 2919692658 Bacteria 5943958
324 2929180855 2929177148 Bacteria 7883697
325 2945983255 2945977869 Bacteria 7777518
326 2946017355 2946013367 Bacteria 7766675
327 Ga0207676_10145190
328 rootH1_10000580
329 rootL2_10084027
330 rootH1_10165135
331 JGI25160J50197_1006192
332 Ga0065165_1000285
333 Ga0065712_10007417
334 Ga0070683_100131274
335 Ga0070690_100017118
336 Ga0070670_100134768
337 Ga0068869_100007362
338 Ga0068869_100009352
339 Ga0068869_100023860
340 Ga0068869_100030358
341 Ga0068869_100146311
342 Ga0068869_100192434
343 Ga0070666_10000152
344 Ga0070666_10096196
345 Ga0070682_100028480
346 Ga0068868_100001980
347 Ga0068868_100049123
348 Ga0070689_100002006
349 Ga0070689_100006486
350 Ga0070689_100025725
351 Ga0070687_100041346
352 Ga0070661_100000277
353 Ga0070661_100004639
354 Ga0070668_100029233
355 Ga0070668_100036300
356 Ga0070668_100072481
357 Ga0070669_100001419
358 Ga0070675_100058550
359 Ga0070675_100080281
360 Ga0070675_100116068
361 Ga0070675_100129126
362 Ga0070671_100015227
363 Ga0070671_100109010
364 Ga0070671_100183808
365 Ga0070673_100053481
366 Ga0070673_100103283
367 Ga0070673_100175140
368 Ga0070688_100027616
369 Ga0070688_100034065
370 Ga0070688_100096441
371 Ga0070667_100022033
372 Ga0070667_100044149
373 Ga0070667_100076068
374 Ga0070667_100129542
375 Ga0070662_100071161
376 Ga0070662_100107683
377 Ga0070685_10021061
378 Ga0070685_10026283
379 Ga0070707_100000154
380 Ga0070698_100007300
381 Ga0070698_100061398
382 Ga0070699_100058001
383 Ga0070684_100015179
384 Ga0070672_100032424
385 Ga0070665_100082707
386 Ga0070665_100134954
387 Ga0070664_100006492
388 Ga0070664_100032734
389 Ga0070664_100078605
390 Ga0070664_100148708
391 Ga0068854_100085215
392 Ga0068859_100000026
393 Ga0068859_100018659
394 Ga0068859_100072938
395 Ga0068859_100288984
396 Ga0068864_100004790
397 Ga0068864_100087633
398 Ga0068861_100014069
399 Ga0068861_100054506
400 Ga0068851_10026448
401 Ga0068870_10016172
402 Ga0068863_100000546
403 Ga0068863_100000852
404 Ga0068863_100185646
405 Ga0068858_100012209
406 Ga0068858_100149651
407 Ga0068860_100004157
408 Ga0068860_100018607
409 Ga0068860_100020258
410 Ga0068860_100051223
411 Ga0068860_100074668
412 Ga0068862_100070414
413 Ga0068862_100175371
414 Ga0081539_10005400
415 Ga0075365_10073502
416 Ga0075368_10011089
417 Ga0075363_100001450
418 Ga0075364_10018342
419 Ga0075362_10060419
420 Ga0075367_10001462
421 Ga0075366_10000463
422 Ga0097621_100105448
423 Ga0097621_100114957
424 Ga0075428_100012909
425 Ga0075428_100054112
426 Ga0075430_100093454
427 Ga0075431_100042795
428 Ga0075433_10076569
429 Ga0075429_100016453
430 Ga0068865_100018429
431 Ga0097620_100000026
432 Ga0097620_100018659
433 Ga0097620_100072933
434 Ga0097620_100288980
435 Ga0075435_100020617
436 Ga0105240_10003532
437 Ga0105240_10017724
438 Ga0111539_10000194
439 Ga0111539_10007515
440 Ga0111539_10019515
441 Ga0114129_10212992
442 Ga0114129_10445649
443 Ga0105241_10005800
444 Ga0105241_10092357
445 Ga0105241_10099169
446 Ga0105242_10006627
447 Ga0105242_10058769
448 Ga0105242_10067649
449 Ga0105237_10001479
450 Ga0105237_10028997
451 Ga0105249_10000998
452 Ga0105249_10002465
453 Ga0105249_10004058
454 Ga0105249_10008993
455 Ga0105249_10023036
456 Ga0105239_10026401
457 Ga0105239_10090167
458 Ga0105246_10031769
459 Ga0105246_10076311
460 Ga0157370_10133192
461 Ga0157374_10003037
462 Ga0157374_10010596
463 Ga0157378_10003686
464 Ga0157378_10040502
465 Ga0163162_10000098
466 Ga0163162_10000254
467 Ga0163162_10003821
468 Ga0163162_10022108
469 Ga0163162_10061372
470 Ga0157372_10043147
471 Ga0157372_10122161
472 Ga0157372_10239249
473 Ga0157375_10010252
474 Ga0157375_10029419
475 Ga0157375_10029788
476 Ga0157375_10045873
477 Ga0157375_10052195
478 Ga0157375_10100837
479 Ga0163163_10000348
480 Ga0163163_10042209
481 Ga0157380_10004511
482 Ga0157380_10004982
483 Ga0157380_10066853
484 Ga0157380_10129844
485 Ga0157380_10144368
486 Ga0157377_10005679
487 Ga0157377_10013304
488 Ga0157379_10066138
489 Ga0157376_10001745
490 Ga0157376_10005930
491 Ga0157376_10125789
492 Ga0163161_10003647
493 Ga0209436_101904
494 Ga0209130_1001441
495 Ga0209676_1000348
496 Ga0207426_1000002
497 Ga0207426_1000135
498 Ga0207642_10050463
499 Ga0207688_10013052
500 Ga0207680_10000200
501 Ga0207680_10062541
502 Ga0207647_10032023
503 Ga0207643_10056949
504 Ga0207643_10071038
505 Ga0207654_10020948
506 Ga0207654_10105001
507 Ga0207695_10000585
508 Ga0207695_10070204
509 Ga0207671_10001207
510 Ga0207671_10062200
511 Ga0207671_10181127
512 Ga0207662_10000697
513 Ga0207681_10016487
514 Ga0207681_10089065
515 Ga0207650_10035910
516 Ga0207650_10070822
517 Ga0207644_10026203
518 Ga0207644_10049891
519 Ga0207706_10006070
520 Ga0207706_10034838
521 Ga0207706_10046332
522 Ga0207706_10092667
523 Ga0207670_10004033
524 Ga0207704_10102679
525 Ga0207691_10029610
526 Ga0207691_10034370
527 Ga0207691_10097250
528 Ga0207711_10108974
529 Ga0207689_10000918
530 Ga0207689_10001574
531 Ga0207689_10006835
532 Ga0207689_10014713
533 Ga0207689_10074045
534 Ga0207689_10132457
535 Ga0207661_10009475
536 Ga0207661_10013205
537 Ga0207661_10041635
538 Ga0207661_10048607
539 Ga0207679_10002203
540 Ga0207679_10004899
541 Ga0207679_10041791
542 Ga0207679_10081784
543 Ga0207651_10012179
544 Ga0207651_10079928
545 Ga0207651_10131173
546 Ga0207712_10000871
547 Ga0207712_10021610
548 Ga0207712_10023162
549 Ga0207712_10135690
550 Ga0207668_10119338
551 Ga0207658_10032018
552 Ga0207658_10045380
553 Ga0207677_10004257
554 Ga0207677_10057412
555 Ga0207677_10113427
556 Ga0207703_10095848
557 Ga0207703_10114369
558 Ga0207678_10044595
559 Ga0207708_10083327
560 Ga0207708_10157789
561 Ga0207641_10000215
562 Ga0207641_10000539
563 Ga0207641_10291980
564 Ga0207648_10050593
565 Ga0207676_10001245
566 Ga0207676_10066289
567 Ga0207676_10087213
568 Ga0207674_10032479
569 Ga0207674_10039335
570 Ga0207675_100003606
571 Ga0207675_100031437
572 Ga0207698_10020896
573 Ga0207428_10000365
574 Ga0268266_10076989
575 Ga0268265_10037786
576 Ga0268265_10076557
577 Ga0268264_10000801
578 Ga0268264_10013359
579 Ga0268264_10014368
580 Ga0268264_10043845
581 Ga0307405_10005559
582 Ga0307413_10027728
583 Ga0307416_100002812
584 Ga0307414_10000069
585 Ga0307415_100011464
586 Ga0373947_0169826
587 Ga0439441_005197
588 Ga0451577_0050065
589 Ga0451577_0146095
590 Ga0466972_0003123
591 Ga0453683_0104258
592 Ga0453684_0000010
593 Ga0453684_0002756
594 Ga0453684_0006867
595 Ga0453684_0225114
596 Ga0451576_0027772
597 Ga0495653_0119320
598 Ga0495643_0042837
599 Ga0495586_0003088
600 Ga0495634_0054073
601 Ga0495634_0134494
602 Ga0495672_0110205
603 Ga0496104_0006320
604 Ga0496109_0291247
605 Ga0496110_0059631
606 Ga0496110_0104385
607 Ga0496111_0100108
608 Ga0496115_0020562
609 Ga0501047_0046710
610 Ga0501070_0097681
611 Ga0501201_000099
612 Ga0501206_003421
613 Ga0501207_000306
614 Ga0501217_008421
615 Ga0501223_000526
616 Ga0501235_006647
617 Ga0501243_000376
618 Ga0501252_000154
619 Ga0501259_000290
620 Ga0501261_004513
621 Ga0501225_0001751
622 Ga0501234_004751
623 Ga0501245_000337
624 Ga0501080_0138140
625 Ga0501035_0082326
626 Ga0501035_0237764
627 Ga0501044_0000597
628 Ga0501044_0001053
629 Ga0501044_0084464
630 nmdc:mga03683_26006_c1
631 nmdc:mga0yw44_2568_c1
632 nmdc:mga0k408_881_c1
633 nmdc:mga05p37_370991_c1
634 nmdc:mga06r32_46401_c1
635 nmdc:mga08y16_102650_c1
636 nmdc:mga08y16_134801_c1
637 nmdc:mga08y16_146702_c1
638 nmdc:mga08y16_782_c1
639 nmdc:mga08y16_79140_c1
640 nmdc:mga0rr50_139663_c1
641 nmdc:mga0a205_54925_c1
642 2522547752
643 2819678420
644 2889420116
645 2896089170
646 2910248658
647 2911143122
648 2919696147
649 2929180855
650 2945983255
651 2946017355

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

38

163

0.93

PF19051

GFO_IDH_MocA_C2

Oxidoreductase family, C-terminal alpha/beta domain

182

273

0.92

PF19051

GFO_IDH_MocA_C2

Oxidoreductase family, C-terminal alpha/beta domain

318

432

0.87

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

172

314

0.84

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

176

405

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8642 36 423
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.862 36 416
3q2k-assembly1.cif.gz_E crystal structure of the wlba dehydrogenase from bordetella pertussis in complex with nadh and udp-glcnaca 0.8566 36 423
2glx-assembly1.cif.gz_A crystal structure analysis of bacterial 1,5-af reductase 0.8551 39 419
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8485 36 416
ID Description Score Start End Superfamily
af_P77503_5_146_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.896 35 179 3.40.50.720
af_P77503_10_129_3.30.360.10 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.8951 39 162 3.30.360.10
3moiA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8923 36 163 3.40.50.720
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8893 39 163 3.40.50.720
af_P42599_1_134_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8885 38 168 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2M6GIS5-F1-model_v4 Oxidoreductase 0.9914 57 455 GO:0000166
GO:0016491
AF-A0A2M6GIS5-F1-model_v4 Oxidoreductase 0.9865 57 455 GO:0000166
GO:0016491
AF-A0A3M1TXA8-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9433 32 450 GO:0000166
AF-A0A142WSD2-F1-model_v4 Inositol 2-dehydrogenase (EC 1.1.1.18) 0.9278 35 421 GO:0000166
GO:0050112
AF-A0A3C0AG81-F1-model_v4 Dehydrogenase 0.9272 99 451 GO:0000166

Map