F407743

General Info

Members Datasets Scaffolds Average Seq Length
325 178 650 390

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10072037|Ga0081455_100720372
Length 440
Sequence MTTDETKGSWKRCTNFSASGHVMNTDETKATTADTTQTPAVSPGETAQGDSVVAPLSAGGPLSAGRPPGGRARVAFVGLAAAALVLGVVIYAGIRSRVTANATLTRATEQSAIPTVDVVHPTADASTAEIVLPGNTQAFTNAPIYARTSGYLKRWYFDIGAHVKKGQLLAEIESPEVDQQLQQARADLNTAQANFDLAKITADRWQALLKTNSVSQQETDQAVGNYHALQATLDSQAANVRRLEQLQSFEKIYAPFDGVITARNTDVGALINAGASTPGQGLFTLAAIDKLRVYVTIPEVYARAARPGAPASLLLDAFPGEVFHGTLVRQANAIDPTSRTLLVEVDVDNAKGQLMPGAYVSVHLTLPDSVHAVTIPANTLLFRKEGLRVGVVRQGKAELVPVTIGRDYGAAVQVVEGLQPTDAVILNPADSLITGTPVKV

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
59 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
76 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
77 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
78 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
115 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
117 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
122 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
123 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
124 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
125 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
126 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
132 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
133 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
134 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
135 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
136 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
140 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
153 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
168 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
171 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
174 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
175 2849560528 Caulobacter zeae 410 Isolate Unclassified
176 2851153111 Caulobacter radicis 736 Isolate Unclassified
177 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
178 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.23
Metatranscriptomes 0.92
Isolates 1.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.85
Nodule 0
Rhizoplane 4.62
Rhizosphere 87.38
Stem 0
Stem Tuber 0
Unclassified 2.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10072037 3300005937 Bacteria 2863
2 JGI25406J46586_10040044 3300003203 Bacteria 1665
3 Ga0065704_10012019 3300005289 Bacteria 3783
4 Ga0065712_10078440 3300005290 Bacteria 3336
5 Ga0065715_10011047 3300005293 Bacteria 4024
6 Ga0070676_10009622 3300005328 Bacteria 5224
7 Ga0070683_100000007 3300005329 Bacteria 342155
8 Ga0070666_10049845 3300005335 Bacteria 2816
9 Ga0070680_100006546 3300005336 Bacteria 8861
10 Ga0068868_100031275 3300005338 Bacteria 4087
11 Ga0070668_100016166 3300005347 Bacteria 5583
12 Ga0070668_100080242 3300005347 Bacteria 2556
13 Ga0070675_100072493 3300005354 Bacteria 2859
14 Ga0070675_100094083 3300005354 Bacteria 2514
15 Ga0070671_100086885 3300005355 Bacteria 2617
16 Ga0070674_100019247 3300005356 Bacteria 4334
17 Ga0070673_100058915 3300005364 Bacteria 3038
18 Ga0070667_100105007 3300005367 Bacteria 2444
19 Ga0070709_10008108 3300005434 Bacteria 5765
20 Ga0070714_100123607 3300005435 Bacteria 2304
21 Ga0070713_100035347 3300005436 Bacteria 4022
22 Ga0070713_100068116 3300005436 Bacteria 2999
23 Ga0070713_100271126 3300005436 Bacteria 1554
24 Ga0070713_100285390 3300005436 Bacteria 1516
25 Ga0070710_10098983 3300005437 Bacteria 1733
26 Ga0070711_100052133 3300005439 Bacteria 2814
27 Ga0070711_100211830 3300005439 Bacteria 1501
28 Ga0070694_100095218 3300005444 Bacteria 2096
29 Ga0070708_100043279 3300005445 Bacteria 3956
30 Ga0070708_100057273 3300005445 Bacteria 3469
31 Ga0070708_100085131 3300005445 Bacteria 2869
32 Ga0070708_100135116 3300005445 Bacteria 2284
33 Ga0070708_100233551 3300005445 Bacteria 1726
34 Ga0070708_100313201 3300005445 Unclassified 1478
35 Ga0070663_100012781 3300005455 Bacteria 5324
36 Ga0070662_100139681 3300005457 Bacteria 1876
37 Ga0070681_10005778 3300005458 Bacteria 11966
38 Ga0070681_10021791 3300005458 Bacteria 6425
39 Ga0070681_10163971 3300005458 Bacteria 2146
40 Ga0070706_100011483 3300005467 Bacteria 8233
41 Ga0070706_100018964 3300005467 Bacteria 6345
42 Ga0070706_100041137 3300005467 Bacteria 4267
43 Ga0070707_100021000 3300005468 Bacteria 6166
44 Ga0070707_100063237 3300005468 Bacteria 3552
45 Ga0070707_100124092 3300005468 Bacteria 2508
46 Ga0070707_100203583 3300005468 Bacteria 1929
47 Ga0070698_100000582 3300005471 Bacteria 39263
48 Ga0070698_100004462 3300005471 Bacteria 15384
49 Ga0070698_100005433 3300005471 Bacteria 13913
50 Ga0070698_100007820 3300005471 Bacteria 11573
51 Ga0070698_100237164 3300005471 Bacteria 1757
52 Ga0070698_100286763 3300005471 Bacteria 1578
53 Ga0070699_100025812 3300005518 Bacteria 5064
54 Ga0070699_100052513 3300005518 Bacteria 3527
55 Ga0070699_100134979 3300005518 Bacteria 2177
56 Ga0070679_100010934 3300005530 Bacteria 8625
57 Ga0070679_100134101 3300005530 Bacteria 2457
58 Ga0070684_100000028 3300005535 Bacteria 117820
59 Ga0070697_100000963 3300005536 Bacteria 21731
60 Ga0070697_100009930 3300005536 Bacteria 7425
61 Ga0070697_100068264 3300005536 Unclassified 2910
62 Ga0070697_100100362 3300005536 Bacteria 2404
63 Ga0070672_100078973 3300005543 Bacteria 2633
64 Ga0070695_100118011 3300005545 Bacteria 1811
65 Ga0070696_100027071 3300005546 Bacteria 3904
66 Ga0070696_100122901 3300005546 Bacteria 1880
67 Ga0068855_100006386 3300005563 Bacteria 14366
68 Ga0068856_100151622 3300005614 Bacteria 2327
69 Ga0068852_100040041 3300005616 Bacteria 3951
70 Ga0068866_10008266 3300005718 Bacteria 4378
71 Ga0081455_10003647 3300005937 Bacteria 17634
72 Ga0081455_10061402 3300005937 Bacteria 3163
73 Ga0081538_10023500 3300005981 Bacteria 4429
74 Ga0081540_1011758 3300005983 Bacteria 5823
75 Ga0081539_10003615 3300005985 Bacteria 18680
76 Ga0070717_10010150 3300006028 Bacteria 7091
77 Ga0070717_10111643 3300006028 Bacteria 2333
78 Ga0070715_10004160 3300006163 Bacteria 4709
79 Ga0070715_10016752 3300006163 Bacteria 2760
80 Ga0070716_100081986 3300006173 Bacteria 1928
81 Ga0070712_100142970 3300006175 Bacteria 1828
82 Ga0075369_10006810 3300006186 Bacteria 4337
83 Ga0075428_100055619 3300006844 Bacteria 4335
84 Ga0075428_100227867 3300006844 Bacteria 2011
85 Ga0075428_100348327 3300006844 Bacteria 1590
86 Ga0075430_100000103 3300006846 Bacteria 51038
87 Ga0075430_100005479 3300006846 Bacteria 10719
88 Ga0075431_100014803 3300006847 Bacteria 7897
89 Ga0075431_100226621 3300006847 Bacteria 1905
90 Ga0075431_100349802 3300006847 Bacteria 1486
91 Ga0075433_10001135 3300006852 Bacteria 19279
92 Ga0075433_10025973 3300006852 Bacteria 4954
93 Ga0075433_10269571 3300006852 Unclassified 1509
94 Ga0075433_10284722 3300006852 Bacteria 1464
95 Ga0075434_100002186 3300006871 Bacteria 17048
96 Ga0075434_100003816 3300006871 Bacteria 13474
97 Ga0075434_100015295 3300006871 Bacteria 7353
98 Ga0075434_100023791 3300006871 Bacteria 5977
99 Ga0075434_100032922 3300006871 Bacteria 5112
100 Ga0075434_100076527 3300006871 Bacteria 3342
101 Ga0075434_100129462 3300006871 Bacteria 2542
102 Ga0075434_100232999 3300006871 Bacteria 1861
103 Ga0075429_100006406 3300006880 Bacteria 10190
104 Ga0075429_100083083 3300006880 Bacteria 2792
105 Ga0075429_100110473 3300006880 Bacteria 2403
106 Ga0068865_100058986 3300006881 Bacteria 2683
107 Ga0075436_100006398 3300006914 Bacteria 8073
108 Ga0075435_100023544 3300007076 Bacteria 4765
109 Ga0075435_100034336 3300007076 Bacteria 4018
110 Ga0075435_100096625 3300007076 Bacteria 2444
111 Ga0075435_100132878 3300007076 Bacteria 2083
112 Ga0099794_10003280 3300007265 Bacteria 6145
113 Ga0099794_10007566 3300007265 Bacteria 4468
114 Ga0099794_10010415 3300007265 Bacteria 3948
115 Ga0099794_10016110 3300007265 Bacteria 3310
116 Ga0099794_10022385 3300007265 Bacteria 2881
117 Ga0099794_10051840 3300007265 Bacteria 1977
118 Ga0099795_10023014 3300007788 Bacteria 2063
119 Ga0099795_10036571 3300007788 Bacteria 1724
120 Ga0099795_10051368 3300007788 Bacteria 1503
121 Ga0105240_10008681 3300009093 Bacteria 14508
122 Ga0114129_10005794 3300009147 Bacteria 17494
123 Ga0114129_10006910 3300009147 Bacteria 16145
124 Ga0114129_10009254 3300009147 Bacteria 14047
125 Ga0114129_10033021 3300009147 Bacteria 7313
126 Ga0114129_10077216 3300009147 Bacteria 4633
127 Ga0114129_10376544 3300009147 Bacteria 1876
128 Ga0105248_10278602 3300009177 Bacteria 1883
129 Ga0099796_10019727 3300010159 Bacteria 2049
130 Ga0105239_10259810 3300010375 Bacteria 1951
131 Ga0157370_10002176 3300013104 Bacteria 23917
132 Ga0157370_10309194 3300013104 Bacteria 1458
133 Ga0157369_10222767 3300013105 Bacteria 1974
134 Ga0157369_10230620 3300013105 Bacteria 1936
135 Ga0157374_10029976 3300013296 Bacteria 4936
136 Ga0157374_10092949 3300013296 Bacteria 2879
137 Ga0163162_10135274 3300013306 Bacteria 2575
138 Ga0157372_10178262 3300013307 Bacteria 2460
139 Ga0157372_10435980 3300013307 Bacteria 1527
140 Ga0157375_10115269 3300013308 Bacteria 2790
141 Ga0157375_10461332 3300013308 Bacteria 1436
142 Ga0163163_10056779 3300014325 Bacteria 3869
143 Ga0157380_10314558 3300014326 Bacteria 1449
144 Ga0157379_10005153 3300014968 Bacteria 11220
145 Ga0163161_10018241 3300017792 Bacteria 4918
146 Ga0213872_10000207 3300021361 Bacteria 52310
147 Ga0213872_10000879 3300021361 Bacteria 21736
148 Ga0213872_10044078 3300021361 Bacteria 2031
149 Ga0213872_10067075 3300021361 Bacteria 1620
150 Ga0213876_10001126 3300021384 Bacteria 17044
151 Ga0213875_10002006 3300021388 Bacteria 12564
152 Ga0213875_10006009 3300021388 Bacteria 6428
153 Ga0228598_1000135 3300024227 Bacteria 12495
154 Ga0207426_1026968 3300025302 Bacteria 1919
155 Ga0207697_10001693 3300025315 Bacteria 11873
156 Ga0207692_10050177 3300025898 Bacteria 2109
157 Ga0207692_10139980 3300025898 Bacteria 1376
158 Ga0207642_10028576 3300025899 Bacteria 2298
159 Ga0207688_10007881 3300025901 Bacteria 5796
160 Ga0207647_10000520 3300025904 Bacteria 30739
161 Ga0207699_10038079 3300025906 Bacteria 2753
162 Ga0207645_10003509 3300025907 Bacteria 11865
163 Ga0207684_10005894 3300025910 Bacteria 11223
164 Ga0207684_10015979 3300025910 Bacteria 6449
165 Ga0207684_10020180 3300025910 Bacteria 5691
166 Ga0207684_10048648 3300025910 Bacteria 3596
167 Ga0207707_10010333 3300025912 Bacteria 8099
168 Ga0207707_10087774 3300025912 Bacteria 2717
169 Ga0207695_10015604 3300025913 Bacteria 8935
170 Ga0207693_10017259 3300025915 Bacteria 5756
171 Ga0207693_10138947 3300025915 Bacteria 1911
172 Ga0207693_10145019 3300025915 Bacteria 1867
173 Ga0207663_10008493 3300025916 Bacteria 5373
174 Ga0207663_10187843 3300025916 Bacteria 1481
175 Ga0207660_10004413 3300025917 Bacteria 9167
176 Ga0207652_10015154 3300025921 Bacteria 6255
177 Ga0207646_10039451 3300025922 Bacteria 4251
178 Ga0207646_10040988 3300025922 Bacteria 4163
179 Ga0207646_10122070 3300025922 Bacteria 2341
180 Ga0207646_10182012 3300025922 Bacteria 1898
181 Ga0207646_10187398 3300025922 Bacteria 1869
182 Ga0207650_10103183 3300025925 Bacteria 2198
183 Ga0207659_10034348 3300025926 Bacteria 3496
184 Ga0207700_10030122 3300025928 Bacteria 3839
185 Ga0207700_10030864 3300025928 Bacteria 3801
186 Ga0207700_10150520 3300025928 Bacteria 1922
187 Ga0207664_10111937 3300025929 Bacteria 2272
188 Ga0207644_10166731 3300025931 Bacteria 1716
189 Ga0207706_10026820 3300025933 Bacteria 5157
190 Ga0207669_10028918 3300025937 Bacteria 3056
191 Ga0207665_10007568 3300025939 Bacteria 7175
192 Ga0207665_10018221 3300025939 Bacteria 4614
193 Ga0207665_10023304 3300025939 Bacteria 4078
194 Ga0207665_10073843 3300025939 Bacteria 2333
195 Ga0207691_10004699 3300025940 Bacteria 13223
196 Ga0207691_10091191 3300025940 Bacteria 2731
197 Ga0207661_10000010 3300025944 Bacteria 375338
198 Ga0207667_10008451 3300025949 Bacteria 12228
199 Ga0207651_10009930 3300025960 Bacteria 5243
200 Ga0207668_10060197 3300025972 Bacteria 2664
201 Ga0207668_10091112 3300025972 Bacteria 2240
202 Ga0207678_10015411 3300026067 Bacteria 6722
203 Ga0207702_10121427 3300026078 Bacteria 2339
204 Ga0207698_10027242 3300026142 Bacteria 4054
205 Ga0209588_1005221 3300027671 Bacteria 3708
206 Ga0209588_1019871 3300027671 Unclassified 2100
207 Ga0265354_1003437 3300028016 Bacteria 1774
208 Ga0268266_10236368 3300028379 Bacteria 1685
209 Ga0265338_10022194 3300028800 Bacteria 6582
210 Ga0265338_10068909 3300028800 Bacteria 3044
211 Ga0265770_1001005 3300030878 Bacteria 3906
212 Ga0265760_10000182 3300031090 Bacteria 16421
213 Ga0265760_10001689 3300031090 Bacteria 6489
214 Ga0265325_10005178 3300031241 Bacteria 8102
215 Ga0307513_10213861 3300031456 Bacteria 1756
216 Ga0265313_10032505 3300031595 Unclassified 2663
217 Ga0265314_10161939 3300031711 Bacteria 1360
218 Ga0265342_10043108 3300031712 Bacteria 2724
219 Ga0373936_0021394 3300035113 Bacteria 2515
220 Ga0373943_0067492 3300035170 Bacteria 1804
221 Ga0373931_0040252 3300035691 Bacteria 2452
222 Ga0373927_0070863 3300035695 Bacteria 2256
223 Ga0373933_0009607 3300035724 Bacteria 5284
224 Ga0373937_0075111 3300036401 Bacteria 3120
225 Ga0373937_0243374 3300036401 Bacteria 1695
226 Ga0373925_0079290 3300037068 Bacteria 2495
227 Ga0373925_0087961 3300037068 Bacteria 2372
228 Ga0436364_0158821 3300037853 Bacteria 21611
229 Ga0436364_0183741 3300037853 Bacteria 2981
230 Ga0436364_0687600 3300037853 Bacteria 16506
231 Ga0436364_1051229 3300037853 Bacteria 2467
232 Ga0436364_1298494 3300037853 Bacteria 2979
233 Ga0436365_0018457 3300039437 Bacteria 17912
234 Ga0436365_0040951 3300039437 Bacteria 6870
235 Ga0436365_0629243 3300039437 Bacteria 13018
236 Ga0436365_1238967 3300039437 Bacteria 4547
237 Ga0436365_1872722 3300039437 Bacteria 1687
238 Ga0436360_0327470 3300039438 Bacteria 2243
239 Ga0436360_0706363 3300039438 Bacteria 3002
240 Ga0436360_1110189 3300039438 Bacteria 6473
241 Ga0436361_0064003 3300039447 Unclassified 1932
242 Ga0436361_0074086 3300039447 Bacteria 2142
243 Ga0436361_0213477 3300039447 Bacteria 6056
244 Ga0436361_0537861 3300039447 Bacteria 9357
245 Ga0436361_1006416 3300039447 Bacteria 3885
246 Ga0436361_1052449 3300039447 Bacteria 57332
247 Ga0436361_1072884 3300039447 Bacteria 14490
248 Ga0436362_0093870 3300039453 Bacteria 3480
249 Ga0436362_0133795 3300039453 Bacteria 1529
250 Ga0495580_0038021 3300046472 Bacteria 3450
251 Ga0495582_0037140 3300046473 Bacteria 2680
252 Ga0495642_0046380 3300046528 Bacteria 1778
253 Ga0495668_0000200 3300046616 Bacteria 88508
254 Ga0495625_0182797 3300046660 Bacteria 1393
255 Ga0495669_0048980 3300046684 Bacteria 1891
256 Ga0495680_0122581 3300047322 Bacteria 1918
257 Ga0495686_0000031 3300047472 Bacteria 350171
258 Ga0495686_0012923 3300047472 Bacteria 5822
259 Ga0495686_0069049 3300047472 Bacteria 2179
260 Ga0495686_0071779 3300047472 Bacteria 2130
261 Ga0495602_0243845 3300048088 Unclassified 1343
262 Ga0496100_0004064 3300048903 Bacteria 7714
263 Ga0496101_0006160 3300048904 Bacteria 7705
264 Ga0496102_0017175 3300048905 Bacteria 6336
265 Ga0496103_0010131 3300048906 Bacteria 5574
266 Ga0496104_0000068 3300048907 Bacteria 107801
267 Ga0496104_0084748 3300048907 Bacteria 3024
268 Ga0496106_0007251 3300048909 Bacteria 8188
269 Ga0496107_0051037 3300048910 Bacteria 2982
270 Ga0496109_0121687 3300048912 Bacteria 2432
271 Ga0496109_0502736 3300048912 Unclassified 1144
272 Ga0496111_0053902 3300048914 Bacteria 2906
273 Ga0496112_0031173 3300048915 Bacteria 5168
274 Ga0496113_0055152 3300048916 Bacteria 2978
275 Ga0496115_0009806 3300048918 Bacteria 7131
276 Ga0496115_0114688 3300048918 Bacteria 2215
277 Ga0496124_0146650 3300048927 Bacteria 1856
278 Ga0496126_0000702 3300048929 Bacteria 61188
279 Ga0496126_0029569 3300048929 Bacteria 5204
280 Ga0501047_0027301 3300049581 Bacteria 5499
281 Ga0501070_0076184 3300049586 Bacteria 2777
282 Ga0501044_0011831 3300049823 Bacteria 9455
283 Ga0501044_0103826 3300049823 Bacteria 2857
284 nmdc:mga05p37_115005_c1 3300050507 Bacteria 3307
285 nmdc:mga05p37_185465_c1 3300050507 Bacteria 2530
286 nmdc:mga05p37_25951_c1 3300050507 Bacteria 7125
287 nmdc:mga05p37_31169_c1 3300050507 Bacteria 6513
288 nmdc:mga05p37_62739_c1 3300050507 Bacteria 4574
289 nmdc:mga05p37_70689_c1 3300050507 Bacteria 4293
290 nmdc:mga09592_18516_c1 3300050508 Bacteria 5712
291 nmdc:mga09592_25712_c1 3300050508 Bacteria 4874
292 nmdc:mga09592_87449_c1 3300050508 Bacteria 2661
293 nmdc:mga09592_9477_c1 3300050508 Bacteria 7914
294 nmdc:mga0qj67_222665_c1 3300050509 Bacteria 1532
295 nmdc:mga0qj67_23013_c1 3300050509 Bacteria 4789
296 nmdc:mga06r32_135081_c1 3300050510 Bacteria 2441
297 nmdc:mga06r32_13912_c1 3300050510 Bacteria 7300
298 nmdc:mga06r32_248155_c1 3300050510 Bacteria 1768
299 nmdc:mga06r32_36762_c1 3300050510 Bacteria 4630
300 nmdc:mga06r32_38470_c1 3300050510 Bacteria 4533
301 nmdc:mga06r32_66544_c1 3300050510 Bacteria 3477
302 nmdc:mga0n895_18328_c1 3300050512 Bacteria 6475
303 nmdc:mga0n895_21514_c1 3300050512 Bacteria 6034
304 nmdc:mga0n895_25328_c1 3300050512 Bacteria 5604
305 nmdc:mga0n895_48437_c1 3300050512 Bacteria 4160
306 nmdc:mga0rr50_106555_c1 3300050513 Bacteria 2212
307 nmdc:mga0rr50_119787_c1 3300050513 Bacteria 2093
308 nmdc:mga0rr50_19223_c1 3300050513 Bacteria 4605
309 nmdc:mga0rr50_32099_c1 3300050513 Bacteria 2886
310 nmdc:mga08x19_104813_c1 3300050514 Bacteria 1880
311 nmdc:mga0a205_11074_c1 3300050515 Bacteria 8298
312 nmdc:mga0a205_44284_c1 3300050515 Bacteria 4289
313 nmdc:mga0a205_50805_c1 3300050515 Bacteria 4003
314 nmdc:mga0a205_925_c1 3300050515 Bacteria 24214
315 nmdc:mga0sz30_13456_c1 3300050516 Bacteria 3204
316 Ga0500555_004315 3300053103 Bacteria 4043
317 Ga0500616_0000505 3300053153 Bacteria 49872
318 Ga0500645_000455 3300053730 Bacteria 28079
319 Ga0501082_0001959 3300060353 Bacteria 18122
320 2792460121 2791355048 Bacteria 5832535
321 2843746688 2843744320 Bacteria 5659202
322 2849563802 2849560528 Bacteria 5393480
323 2851157430 2851153111 Bacteria 5542585
324 2884962071 2884960567 Bacteria 5437054
325 2898331432 2898329390 Bacteria 5168154
326 Ga0081455_10072037
327 JGI25406J46586_10040044
328 Ga0065704_10012019
329 Ga0065712_10078440
330 Ga0065715_10011047
331 Ga0070676_10009622
332 Ga0070683_100000007
333 Ga0070666_10049845
334 Ga0070680_100006546
335 Ga0068868_100031275
336 Ga0070668_100016166
337 Ga0070668_100080242
338 Ga0070675_100072493
339 Ga0070675_100094083
340 Ga0070671_100086885
341 Ga0070674_100019247
342 Ga0070673_100058915
343 Ga0070667_100105007
344 Ga0070709_10008108
345 Ga0070714_100123607
346 Ga0070713_100035347
347 Ga0070713_100068116
348 Ga0070713_100271126
349 Ga0070713_100285390
350 Ga0070710_10098983
351 Ga0070711_100052133
352 Ga0070711_100211830
353 Ga0070694_100095218
354 Ga0070708_100043279
355 Ga0070708_100057273
356 Ga0070708_100085131
357 Ga0070708_100135116
358 Ga0070708_100233551
359 Ga0070708_100313201
360 Ga0070663_100012781
361 Ga0070662_100139681
362 Ga0070681_10005778
363 Ga0070681_10021791
364 Ga0070681_10163971
365 Ga0070706_100011483
366 Ga0070706_100018964
367 Ga0070706_100041137
368 Ga0070707_100021000
369 Ga0070707_100063237
370 Ga0070707_100124092
371 Ga0070707_100203583
372 Ga0070698_100000582
373 Ga0070698_100004462
374 Ga0070698_100005433
375 Ga0070698_100007820
376 Ga0070698_100237164
377 Ga0070698_100286763
378 Ga0070699_100025812
379 Ga0070699_100052513
380 Ga0070699_100134979
381 Ga0070679_100010934
382 Ga0070679_100134101
383 Ga0070684_100000028
384 Ga0070697_100000963
385 Ga0070697_100009930
386 Ga0070697_100068264
387 Ga0070697_100100362
388 Ga0070672_100078973
389 Ga0070695_100118011
390 Ga0070696_100027071
391 Ga0070696_100122901
392 Ga0068855_100006386
393 Ga0068856_100151622
394 Ga0068852_100040041
395 Ga0068866_10008266
396 Ga0081455_10003647
397 Ga0081455_10061402
398 Ga0081538_10023500
399 Ga0081540_1011758
400 Ga0081539_10003615
401 Ga0070717_10010150
402 Ga0070717_10111643
403 Ga0070715_10004160
404 Ga0070715_10016752
405 Ga0070716_100081986
406 Ga0070712_100142970
407 Ga0075369_10006810
408 Ga0075428_100055619
409 Ga0075428_100227867
410 Ga0075428_100348327
411 Ga0075430_100000103
412 Ga0075430_100005479
413 Ga0075431_100014803
414 Ga0075431_100226621
415 Ga0075431_100349802
416 Ga0075433_10001135
417 Ga0075433_10025973
418 Ga0075433_10269571
419 Ga0075433_10284722
420 Ga0075434_100002186
421 Ga0075434_100003816
422 Ga0075434_100015295
423 Ga0075434_100023791
424 Ga0075434_100032922
425 Ga0075434_100076527
426 Ga0075434_100129462
427 Ga0075434_100232999
428 Ga0075429_100006406
429 Ga0075429_100083083
430 Ga0075429_100110473
431 Ga0068865_100058986
432 Ga0075436_100006398
433 Ga0075435_100023544
434 Ga0075435_100034336
435 Ga0075435_100096625
436 Ga0075435_100132878
437 Ga0099794_10003280
438 Ga0099794_10007566
439 Ga0099794_10010415
440 Ga0099794_10016110
441 Ga0099794_10022385
442 Ga0099794_10051840
443 Ga0099795_10023014
444 Ga0099795_10036571
445 Ga0099795_10051368
446 Ga0105240_10008681
447 Ga0114129_10005794
448 Ga0114129_10006910
449 Ga0114129_10009254
450 Ga0114129_10033021
451 Ga0114129_10077216
452 Ga0114129_10376544
453 Ga0105248_10278602
454 Ga0099796_10019727
455 Ga0105239_10259810
456 Ga0157370_10002176
457 Ga0157370_10309194
458 Ga0157369_10222767
459 Ga0157369_10230620
460 Ga0157374_10029976
461 Ga0157374_10092949
462 Ga0163162_10135274
463 Ga0157372_10178262
464 Ga0157372_10435980
465 Ga0157375_10115269
466 Ga0157375_10461332
467 Ga0163163_10056779
468 Ga0157380_10314558
469 Ga0157379_10005153
470 Ga0163161_10018241
471 Ga0213872_10000207
472 Ga0213872_10000879
473 Ga0213872_10044078
474 Ga0213872_10067075
475 Ga0213876_10001126
476 Ga0213875_10002006
477 Ga0213875_10006009
478 Ga0228598_1000135
479 Ga0207426_1026968
480 Ga0207697_10001693
481 Ga0207692_10050177
482 Ga0207692_10139980
483 Ga0207642_10028576
484 Ga0207688_10007881
485 Ga0207647_10000520
486 Ga0207699_10038079
487 Ga0207645_10003509
488 Ga0207684_10005894
489 Ga0207684_10015979
490 Ga0207684_10020180
491 Ga0207684_10048648
492 Ga0207707_10010333
493 Ga0207707_10087774
494 Ga0207695_10015604
495 Ga0207693_10017259
496 Ga0207693_10138947
497 Ga0207693_10145019
498 Ga0207663_10008493
499 Ga0207663_10187843
500 Ga0207660_10004413
501 Ga0207652_10015154
502 Ga0207646_10039451
503 Ga0207646_10040988
504 Ga0207646_10122070
505 Ga0207646_10182012
506 Ga0207646_10187398
507 Ga0207650_10103183
508 Ga0207659_10034348
509 Ga0207700_10030122
510 Ga0207700_10030864
511 Ga0207700_10150520
512 Ga0207664_10111937
513 Ga0207644_10166731
514 Ga0207706_10026820
515 Ga0207669_10028918
516 Ga0207665_10007568
517 Ga0207665_10018221
518 Ga0207665_10023304
519 Ga0207665_10073843
520 Ga0207691_10004699
521 Ga0207691_10091191
522 Ga0207661_10000010
523 Ga0207667_10008451
524 Ga0207651_10009930
525 Ga0207668_10060197
526 Ga0207668_10091112
527 Ga0207678_10015411
528 Ga0207702_10121427
529 Ga0207698_10027242
530 Ga0209588_1005221
531 Ga0209588_1019871
532 Ga0265354_1003437
533 Ga0268266_10236368
534 Ga0265338_10022194
535 Ga0265338_10068909
536 Ga0265770_1001005
537 Ga0265760_10000182
538 Ga0265760_10001689
539 Ga0265325_10005178
540 Ga0307513_10213861
541 Ga0265313_10032505
542 Ga0265314_10161939
543 Ga0265342_10043108
544 Ga0373936_0021394
545 Ga0373943_0067492
546 Ga0373931_0040252
547 Ga0373927_0070863
548 Ga0373933_0009607
549 Ga0373937_0075111
550 Ga0373937_0243374
551 Ga0373925_0079290
552 Ga0373925_0087961
553 Ga0436364_0158821
554 Ga0436364_0183741
555 Ga0436364_0687600
556 Ga0436364_1051229
557 Ga0436364_1298494
558 Ga0436365_0018457
559 Ga0436365_0040951
560 Ga0436365_0629243
561 Ga0436365_1238967
562 Ga0436365_1872722
563 Ga0436360_0327470
564 Ga0436360_0706363
565 Ga0436360_1110189
566 Ga0436361_0064003
567 Ga0436361_0074086
568 Ga0436361_0213477
569 Ga0436361_0537861
570 Ga0436361_1006416
571 Ga0436361_1052449
572 Ga0436361_1072884
573 Ga0436362_0093870
574 Ga0436362_0133795
575 Ga0495580_0038021
576 Ga0495582_0037140
577 Ga0495642_0046380
578 Ga0495668_0000200
579 Ga0495625_0182797
580 Ga0495669_0048980
581 Ga0495680_0122581
582 Ga0495686_0000031
583 Ga0495686_0012923
584 Ga0495686_0069049
585 Ga0495686_0071779
586 Ga0495602_0243845
587 Ga0496100_0004064
588 Ga0496101_0006160
589 Ga0496102_0017175
590 Ga0496103_0010131
591 Ga0496104_0000068
592 Ga0496104_0084748
593 Ga0496106_0007251
594 Ga0496107_0051037
595 Ga0496109_0121687
596 Ga0496109_0502736
597 Ga0496111_0053902
598 Ga0496112_0031173
599 Ga0496113_0055152
600 Ga0496115_0009806
601 Ga0496115_0114688
602 Ga0496124_0146650
603 Ga0496126_0000702
604 Ga0496126_0029569
605 Ga0501047_0027301
606 Ga0501070_0076184
607 Ga0501044_0011831
608 Ga0501044_0103826
609 nmdc:mga05p37_115005_c1
610 nmdc:mga05p37_185465_c1
611 nmdc:mga05p37_25951_c1
612 nmdc:mga05p37_31169_c1
613 nmdc:mga05p37_62739_c1
614 nmdc:mga05p37_70689_c1
615 nmdc:mga09592_18516_c1
616 nmdc:mga09592_25712_c1
617 nmdc:mga09592_87449_c1
618 nmdc:mga09592_9477_c1
619 nmdc:mga0qj67_222665_c1
620 nmdc:mga0qj67_23013_c1
621 nmdc:mga06r32_135081_c1
622 nmdc:mga06r32_13912_c1
623 nmdc:mga06r32_248155_c1
624 nmdc:mga06r32_36762_c1
625 nmdc:mga06r32_38470_c1
626 nmdc:mga06r32_66544_c1
627 nmdc:mga0n895_18328_c1
628 nmdc:mga0n895_21514_c1
629 nmdc:mga0n895_25328_c1
630 nmdc:mga0n895_48437_c1
631 nmdc:mga0rr50_106555_c1
632 nmdc:mga0rr50_119787_c1
633 nmdc:mga0rr50_19223_c1
634 nmdc:mga0rr50_32099_c1
635 nmdc:mga08x19_104813_c1
636 nmdc:mga0a205_11074_c1
637 nmdc:mga0a205_44284_c1
638 nmdc:mga0a205_50805_c1
639 nmdc:mga0a205_925_c1
640 nmdc:mga0sz30_13456_c1
641 Ga0500555_004315
642 Ga0500616_0000505
643 Ga0500645_000455
644 Ga0501082_0001959
645 2792460121
646 2843746688
647 2849563802
648 2851157430
649 2884962071
650 2898331432

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13437

HlyD_3

HlyD family secretion protein

251

357

0.96

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

140

189

0.95

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

135

360

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gu9-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138i mutant 0.9164 90 221
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.9083 87 221
7ybu-assembly1.cif.gz_A human propionyl-coenzyme a carboxylase 0.903 87 221
4qsh-assembly1.cif.gz_D crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8972 90 222
4qsh-assembly1.cif.gz_B crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.8972 90 222
ID Description Score Start End Superfamily
4l8jA03 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9434 87 223 2.40.50.100
4tkoB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9317 87 221 2.40.50.100
3fppB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9271 87 223 2.40.50.100
1vf7H02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9065 87 221 2.40.50.100
af_P96890_525_598_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9049 90 219 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A1H3LWH9-F1-model_v4 HlyD family secretion protein 0.8909 308 378
AF-A0A537PMH6-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.8795 300 368
AF-A0A257TBJ2-F1-model_v4 Efflux transporter periplasmic adaptor subunit 0.857 304 381
AF-A0A2S0VSU0-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.8468 76 299 GO:0015562
GO:1990281
AF-A0A845GGB8-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.834 78 304 GO:0015562
GO:1990281

Map