F407705

General Info

Members Datasets Scaffolds Average Seq Length
325 161 650 445

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100111442|Ga0070708_1001114421
Length 480
Sequence MKLKPANPFRNEQGALGIAPADGSSIARANKPWKVVIVGGGFGGLSAAKRLESSSVDVTLIDRRNYHLFQPLLYQVATGSLSPGEIAYPLRGVLSRQKNARVWLGTVADIDPDSKRVFLSDGAVIPYDSLVVAAGSETSYYGHNEWQKCAPGLKSIEEATAIRHKILYAFEVAERICDPVQRRAWLTFVIVGAGPTGVELSGAIAEIARQTLKKDFRSIHPDEAQIILLDGAPRILMPFAEDLSDKASRSLAKLGVQVNCGTMVKHVDEAGLTVESGQRTHSIVAKTVIWAGGITASPLGRILAGRTRVETDRGGRIKVKPDLTVPNYPDIYVIGDLAAAMDPNGKPLPGLAQVAMQGGTYAAKAILRKVKGQPQLRPFHYFDKGSLAVIGRAAAVADVFGLRISGFLAWIVWAFIHLMYLVTFQSRLLVFFQWAIQDLTFNRSARLITGAVPSDFNFNEELSELRTAPETKAAPTPTSV

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
52 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
72 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
96 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
97 3300028036 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
102 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
103 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
104 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
105 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
106 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
107 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
108 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
109 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
110 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
111 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
112 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
113 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
114 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
115 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
116 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
128 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
132 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
133 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
134 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
137 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
138 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
139 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
140 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
141 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
144 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
158 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
159 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
160 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
161 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.15
Metatranscriptomes 1.85
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4
Rhizosphere 88.92
Stem 0
Stem Tuber 0
Unclassified 11.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100111442 3300005445 Bacteria 2515
2 Ga0065715_10094781 3300005293 Bacteria 4242
3 Ga0070683_100084895 3300005329 Bacteria 2967
4 Ga0068869_100059780 3300005334 Bacteria 2791
5 Ga0070660_100047290 3300005339 Bacteria 3301
6 Ga0070660_100217522 3300005339 Bacteria 1552
7 Ga0070671_100013912 3300005355 Bacteria 6493
8 Ga0070659_100027871 3300005366 Bacteria 4356
9 Ga0070667_100000846 3300005367 Bacteria 28400
10 Ga0070709_10025821 3300005434 Bacteria 3473
11 Ga0070713_100004475 3300005436 Bacteria 9392
12 Ga0070713_100078947 3300005436 Bacteria 2803
13 Ga0070713_100207842 3300005436 Unclassified 1771
14 Ga0070710_10011061 3300005437 Bacteria 4448
15 Ga0070711_100001028 3300005439 Bacteria 14831
16 Ga0070711_100024199 3300005439 Bacteria 3958
17 Ga0070711_100026110 3300005439 Bacteria 3826
18 Ga0070711_100064215 3300005439 Bacteria 2565
19 Ga0070711_100094043 3300005439 Bacteria 2166
20 Ga0070705_100017211 3300005440 Bacteria 3770
21 Ga0070705_100019648 3300005440 Bacteria 3559
22 Ga0070694_100047305 3300005444 Bacteria 2891
23 Ga0070708_100000687 3300005445 Bacteria 25740
24 Ga0070708_100001048 3300005445 Bacteria 21050
25 Ga0070708_100010337 3300005445 Bacteria 7558
26 Ga0070708_100016424 3300005445 Bacteria 6142
27 Ga0070708_100041610 3300005445 Bacteria 4029
28 Ga0070708_100043323 3300005445 Bacteria 3954
29 Ga0070681_10015431 3300005458 Bacteria 7605
30 Ga0068867_100037006 3300005459 Bacteria 3546
31 Ga0070706_100028501 3300005467 Bacteria 5141
32 Ga0070707_100006919 3300005468 Bacteria 10509
33 Ga0070707_100010874 3300005468 Bacteria 8477
34 Ga0070707_100068081 3300005468 Bacteria 3425
35 Ga0070698_100004369 3300005471 Bacteria 15536
36 Ga0070698_100014120 3300005471 Bacteria 8445
37 Ga0070698_100032469 3300005471 Bacteria 5408
38 Ga0070698_100033308 3300005471 Bacteria 5337
39 Ga0070698_100036195 3300005471 Bacteria 5101
40 Ga0070699_100001205 3300005518 Bacteria 23901
41 Ga0070699_100030391 3300005518 Bacteria 4663
42 Ga0070699_100033109 3300005518 Bacteria 4465
43 Ga0070699_100042787 3300005518 Bacteria 3919
44 Ga0070679_100080361 3300005530 Unclassified 3249
45 Ga0070679_100251098 3300005530 Bacteria 1725
46 Ga0070697_100000634 3300005536 Bacteria 26650
47 Ga0070697_100003668 3300005536 Bacteria 11809
48 Ga0070697_100005588 3300005536 Bacteria 9692
49 Ga0070697_100009429 3300005536 Bacteria 7629
50 Ga0070697_100066876 3300005536 Bacteria 2938
51 Ga0070697_100069577 3300005536 Bacteria 2883
52 Ga0070697_100081625 3300005536 Bacteria 2664
53 Ga0070697_100159348 3300005536 Bacteria 1906
54 Ga0068853_100045667 3300005539 Bacteria 3753
55 Ga0070686_100026473 3300005544 Bacteria 3501
56 Ga0070695_100004105 3300005545 Bacteria 8515
57 Ga0070695_100013250 3300005545 Bacteria 4953
58 Ga0070695_100020087 3300005545 Bacteria 4075
59 Ga0070695_100022487 3300005545 Bacteria 3867
60 Ga0070696_100000745 3300005546 Bacteria 20783
61 Ga0070696_100012068 3300005546 Bacteria 5788
62 Ga0070696_100028673 3300005546 Bacteria 3799
63 Ga0070696_100237126 3300005546 Bacteria 1374
64 Ga0070693_100000089 3300005547 Bacteria 38952
65 Ga0070665_100015002 3300005548 Bacteria 7777
66 Ga0070704_100016945 3300005549 Bacteria 4619
67 Ga0070704_100030202 3300005549 Bacteria 3629
68 Ga0068855_100023599 3300005563 Bacteria 7367
69 Ga0068856_100001855 3300005614 Bacteria 22069
70 Ga0068856_100013168 3300005614 Bacteria 8011
71 Ga0068866_10008037 3300005718 Bacteria 4432
72 Ga0068863_100031054 3300005841 Bacteria 5101
73 Ga0068858_100116046 3300005842 Unclassified 2502
74 Ga0068862_100086652 3300005844 Bacteria 2723
75 Ga0081455_10087153 3300005937 Bacteria 2540
76 Ga0081539_10000021 3300005985 Bacteria 360643
77 Ga0070717_10088668 3300006028 Bacteria 2608
78 Ga0070715_10001454 3300006163 Bacteria 6869
79 Ga0070716_100000837 3300006173 Bacteria 13278
80 Ga0070716_100001243 3300006173 Bacteria 11234
81 Ga0070716_100001383 3300006173 Bacteria 10765
82 Ga0070716_100002633 3300006173 Bacteria 8296
83 Ga0070716_100003508 3300006173 Bacteria 7393
84 Ga0070716_100024763 3300006173 Bacteria 3196
85 Ga0070712_100011225 3300006175 Bacteria 5671
86 Ga0070712_100018529 3300006175 Unclassified 4525
87 Ga0070712_100022937 3300006175 Bacteria 4116
88 Ga0070712_100030733 3300006175 Bacteria 3614
89 Ga0070712_100046466 3300006175 Bacteria 3001
90 Ga0070712_100119635 3300006175 Bacteria 1980
91 Ga0070712_100169105 3300006175 Bacteria 1695
92 Ga0097621_100018037 3300006237 Bacteria 5380
93 Ga0097621_100026224 3300006237 Bacteria 4569
94 Ga0097621_100096941 3300006237 Bacteria 2475
95 Ga0068871_100002629 3300006358 Bacteria 12263
96 Ga0068871_100013726 3300006358 Bacteria 6022
97 Ga0068871_100044802 3300006358 Bacteria 3559
98 Ga0075428_100011707 3300006844 Bacteria 9764
99 Ga0075430_100103847 3300006846 Bacteria 2373
100 Ga0075431_100013084 3300006847 Bacteria 8380
101 Ga0075431_100034218 3300006847 Bacteria 5235
102 Ga0075431_100059788 3300006847 Bacteria 3932
103 Ga0075433_10018051 3300006852 Bacteria 5856
104 Ga0075434_100030659 3300006871 Bacteria 5296
105 Ga0075434_100043112 3300006871 Unclassified 4474
106 Ga0075434_100053884 3300006871 Unclassified 3996
107 Ga0075436_100004180 3300006914 Bacteria 9906
108 Ga0075436_100004537 3300006914 Bacteria 9518
109 Ga0075436_100020627 3300006914 Bacteria 4522
110 Ga0075436_100028758 3300006914 Bacteria 3823
111 Ga0075436_100083852 3300006914 Bacteria 2212
112 Ga0075435_100033519 3300007076 Bacteria 4062
113 Ga0075435_100077711 3300007076 Unclassified 2721
114 Ga0075435_100081436 3300007076 Bacteria 2659
115 Ga0075435_100083726 3300007076 Bacteria 2623
116 Ga0099794_10001073 3300007265 Bacteria 9347
117 Ga0099794_10001956 3300007265 Bacteria 7418
118 Ga0099794_10004399 3300007265 Bacteria 5527
119 Ga0099794_10005460 3300007265 Bacteria 5097
120 Ga0099794_10005981 3300007265 Bacteria 4911
121 Ga0099794_10006486 3300007265 Bacteria 4743
122 Ga0099794_10006547 3300007265 Bacteria 4728
123 Ga0099794_10007587 3300007265 Unclassified 4463
124 Ga0099794_10023626 3300007265 Unclassified 2814
125 Ga0099794_10033463 3300007265 Bacteria 2417
126 Ga0099794_10037940 3300007265 Bacteria 2282
127 Ga0099795_10000532 3300007788 Bacteria 7178
128 Ga0099795_10001955 3300007788 Unclassified 4689
129 Ga0099795_10043302 3300007788 Unclassified 1610
130 Ga0099795_10044313 3300007788 Bacteria 1595
131 Ga0105240_10008716 3300009093 Bacteria 14462
132 Ga0105245_10000076 3300009098 Bacteria 102308
133 Ga0105245_10027067 3300009098 Bacteria 5051
134 Ga0105245_10049563 3300009098 Bacteria 3761
135 Ga0105247_10039860 3300009101 Unclassified 2870
136 Ga0114129_10081432 3300009147 Bacteria 4500
137 Ga0114129_10100565 3300009147 Bacteria 4001
138 Ga0114129_10189151 3300009147 Bacteria 2796
139 Ga0105248_10001112 3300009177 Bacteria 29868
140 Ga0105237_10013575 3300009545 Bacteria 8534
141 Ga0105237_10216538 3300009545 Bacteria 1915
142 Ga0105238_10246891 3300009551 Bacteria 1763
143 Ga0099796_10000378 3300010159 Bacteria 7278
144 Ga0105239_10359695 3300010375 Bacteria 1644
145 Ga0157369_10001600 3300013105 Bacteria 27714
146 Ga0157369_10025132 3300013105 Bacteria 6614
147 Ga0157369_10088670 3300013105 Bacteria 3302
148 Ga0157369_10134063 3300013105 Bacteria 2623
149 Ga0157374_10002729 3300013296 Bacteria 14824
150 Ga0157374_10003794 3300013296 Bacteria 12717
151 Ga0157374_10222133 3300013296 Bacteria 1854
152 Ga0157378_10000402 3300013297 Bacteria 42627
153 Ga0157378_10013230 3300013297 Bacteria 7215
154 Ga0157372_10093663 3300013307 Bacteria 3419
155 Ga0157375_10097590 3300013308 Bacteria 3013
156 Ga0157379_10007220 3300014968 Bacteria 9613
157 Ga0157379_10037087 3300014968 Bacteria 4347
158 Ga0157376_10000004 3300014969 Bacteria 508493
159 Ga0157376_10007331 3300014969 Bacteria 7862
160 Ga0213872_10000725 3300021361 Bacteria 24616
161 Ga0213876_10029405 3300021384 Unclassified 2895
162 Ga0213876_10100452 3300021384 Bacteria 1533
163 Ga0213875_10000027 3300021388 Bacteria 190420
164 Ga0213875_10002961 3300021388 Bacteria 9899
165 Ga0213875_10009357 3300021388 Bacteria 4969
166 Ga0213875_10015103 3300021388 Bacteria 3760
167 Ga0213875_10046537 3300021388 Bacteria 2035
168 Ga0207685_10000190 3300025905 Bacteria 9392
169 Ga0207685_10009227 3300025905 Bacteria 2855
170 Ga0207699_10003104 3300025906 Bacteria 7891
171 Ga0207699_10014044 3300025906 Bacteria 4117
172 Ga0207645_10000285 3300025907 Bacteria 42153
173 Ga0207684_10001438 3300025910 Bacteria 25754
174 Ga0207684_10016801 3300025910 Bacteria 6283
175 Ga0207654_10017318 3300025911 Bacteria 3763
176 Ga0207707_10071487 3300025912 Unclassified 3024
177 Ga0207695_10032871 3300025913 Bacteria 5671
178 Ga0207671_10136688 3300025914 Unclassified 1885
179 Ga0207693_10003813 3300025915 Bacteria 12835
180 Ga0207693_10004466 3300025915 Bacteria 11826
181 Ga0207693_10068163 3300025915 Bacteria 2785
182 Ga0207693_10117640 3300025915 Bacteria 2087
183 Ga0207693_10159355 3300025915 Unclassified 1775
184 Ga0207663_10014380 3300025916 Bacteria 4329
185 Ga0207663_10028610 3300025916 Bacteria 3264
186 Ga0207663_10046324 3300025916 Bacteria 2679
187 Ga0207663_10070853 3300025916 Bacteria 2247
188 Ga0207657_10080702 3300025919 Bacteria 2734
189 Ga0207657_10144594 3300025919 Unclassified 1940
190 Ga0207646_10001829 3300025922 Bacteria 25690
191 Ga0207646_10002208 3300025922 Bacteria 23185
192 Ga0207646_10074974 3300025922 Bacteria 3022
193 Ga0207681_10150627 3300025923 Bacteria 1743
194 Ga0207687_10000104 3300025927 Bacteria 61420
195 Ga0207700_10012563 3300025928 Bacteria 5469
196 Ga0207700_10028699 3300025928 Bacteria 3917
197 Ga0207644_10026865 3300025931 Bacteria 3973
198 Ga0207665_10000103 3300025939 Bacteria 55197
199 Ga0207665_10002558 3300025939 Bacteria 12210
200 Ga0207665_10004040 3300025939 Bacteria 9790
201 Ga0207665_10004700 3300025939 Bacteria 9070
202 Ga0207665_10034976 3300025939 Bacteria 3333
203 Ga0207665_10043849 3300025939 Bacteria 2992
204 Ga0207665_10092594 3300025939 Bacteria 2097
205 Ga0207691_10090248 3300025940 Unclassified 2747
206 Ga0207689_10008848 3300025942 Bacteria 8742
207 Ga0207667_10021250 3300025949 Bacteria 7194
208 Ga0207667_10025590 3300025949 Bacteria 6456
209 Ga0207703_10030596 3300026035 Unclassified 4256
210 Ga0207702_10001949 3300026078 Bacteria 20122
211 Ga0207702_10051985 3300026078 Bacteria 3465
212 Ga0209588_1001427 3300027671 Bacteria 6247
213 Ga0209588_1003702 3300027671 Unclassified 4252
214 Ga0209588_1006537 3300027671 Unclassified 3392
215 Ga0209588_1008440 3300027671 Bacteria 3055
216 Ga0209588_1012873 3300027671 Unclassified 2545
217 Ga0265354_1000050 3300028016 Bacteria 19370
218 Ga0265356_1001501 3300028017 Bacteria 3416
219 Ga0265355_1000052 3300028036 Unclassified 3785
220 Ga0268266_10000366 3300028379 Bacteria 69519
221 Ga0268266_10048016 3300028379 Bacteria 3658
222 Ga0268265_10057790 3300028380 Bacteria 2959
223 Ga0268264_10048806 3300028381 Bacteria 3521
224 Ga0265338_10020367 3300028800 Bacteria 6982
225 Ga0265762_1007408 3300030760 Unclassified 1957
226 Ga0265762_1015273 3300030760 Unclassified 1390
227 Ga0265770_1000847 3300030878 Bacteria 4229
228 Ga0265765_1000839 3300030879 Unclassified 2650
229 Ga0265760_10001542 3300031090 Bacteria 6800
230 Ga0265760_10005050 3300031090 Bacteria 3776
231 Ga0316212_1002332 3300033547 Unclassified 2700
232 Ga0373926_0010756 3300035083 Bacteria 3071
233 Ga0373934_0011451 3300035086 Bacteria 3335
234 Ga0373953_0043623 3300035117 Unclassified 1791
235 Ga0373954_0006899 3300035118 Bacteria 4958
236 Ga0373956_0015107 3300035119 Bacteria 3229
237 Ga0373957_0018707 3300035120 Bacteria 2430
238 Ga0373946_0005481 3300035171 Bacteria 4578
239 Ga0373955_0023753 3300035172 Bacteria 3127
240 Ga0373931_0012703 3300035691 Bacteria 4086
241 Ga0373935_0018284 3300035692 Bacteria 4261
242 Ga0373935_0080329 3300035692 Bacteria 2118
243 Ga0373927_0003602 3300035695 Bacteria 11047
244 Ga0373927_0012841 3300035695 Bacteria 5569
245 Ga0373933_0000737 3300035724 Bacteria 20016
246 Ga0373947_0049711 3300035725 Bacteria 2519
247 Ga0373947_0122543 3300035725 Unclassified 1653
248 Ga0373937_0002826 3300036401 Bacteria 14510
249 Ga0373925_0009656 3300037068 Bacteria 7029
250 Ga0373925_0010331 3300037068 Bacteria 6773
251 Ga0373925_0076930 3300037068 Bacteria 2532
252 Ga0373925_0087084 3300037068 Unclassified 2384
253 Ga0395905_0202027 3300037471 Bacteria 1863
254 Ga0436364_0106138 3300037853 Bacteria 14484
255 Ga0436364_0281120 3300037853 Bacteria 7611
256 Ga0436364_0478514 3300037853 Bacteria 578677
257 Ga0436364_0613847 3300037853 Bacteria 10541
258 Ga0436364_0688515 3300037853 Unclassified 2009
259 Ga0436364_0695273 3300037853 Bacteria 4343
260 Ga0436364_0754760 3300037853 Bacteria 20544
261 Ga0436364_1368348 3300037853 Bacteria 5722
262 Ga0436364_1477153 3300037853 Bacteria 2017
263 Ga0395901_0215198 3300038443 Bacteria 2010
264 Ga0436365_0101032 3300039437 Bacteria 2771
265 Ga0436365_1295235 3300039437 Bacteria 5393
266 Ga0436365_1335820 3300039437 Bacteria 2481
267 Ga0436361_0815288 3300039447 Bacteria 63464
268 Ga0436363_0885577 3300039450 Bacteria 3528
269 Ga0436363_1352701 3300039450 Unclassified 2263
270 Ga0436363_1447159 3300039450 Unclassified 3081
271 Ga0451576_0196676 3300045051 Bacteria 2106
272 Ga0495651_0046517 3300046462 Unclassified 3358
273 Ga0495651_0169812 3300046462 Unclassified 1554
274 Ga0495580_0005084 3300046472 Bacteria 10959
275 Ga0495582_0000116 3300046473 Bacteria 42232
276 Ga0495582_0000244 3300046473 Bacteria 30302
277 Ga0495662_0014538 3300046476 Bacteria 3826
278 Ga0495594_0098893 3300046499 Bacteria 1640
279 Ga0495608_0029056 3300046511 Bacteria 3753
280 Ga0495628_0040476 3300046516 Bacteria 3724
281 Ga0495630_0070919 3300046517 Bacteria 2622
282 Ga0495666_0033989 3300046526 Bacteria 2489
283 Ga0495640_0004922 3300046533 Bacteria 10613
284 Ga0495586_0010945 3300046535 Bacteria 4820
285 Ga0495587_0001796 3300046536 Bacteria 14340
286 Ga0495587_0052956 3300046536 Bacteria 2394
287 Ga0495634_0022135 3300046642 Bacteria 4481
288 Ga0495658_0027032 3300046683 Bacteria 3082
289 Ga0495674_0026438 3300047319 Bacteria 5310
290 Ga0495614_0015239 3300048089 Bacteria 3353
291 Ga0496100_0205701 3300048903 Bacteria 1437
292 Ga0496101_0030802 3300048904 Bacteria 3766
293 Ga0496102_0006748 3300048905 Bacteria 9801
294 Ga0496102_0062909 3300048905 Bacteria 3398
295 Ga0496102_0228920 3300048905 Unclassified 1753
296 Ga0496103_0005406 3300048906 Bacteria 7645
297 Ga0496104_0187914 3300048907 Bacteria 1977
298 Ga0496106_0006353 3300048909 Bacteria 8754
299 Ga0496112_0032291 3300048915 Bacteria 5082
300 Ga0496114_0017337 3300048917 Bacteria 5812
301 Ga0496115_0006607 3300048918 Bacteria 8500
302 Ga0496115_0031552 3300048918 Bacteria 4176
303 Ga0496115_0111331 3300048918 Unclassified 2249
304 nmdc:mga05p37_5992_c1 3300050507 Bacteria 14311
305 nmdc:mga05p37_66583_c1 3300050507 Bacteria 4431
306 nmdc:mga05p37_77004_c1 3300050507 Bacteria 4106
307 nmdc:mga09592_64927_c1 3300050508 Bacteria 3091
308 nmdc:mga06r32_5415_c1 3300050510 Bacteria 11485
309 nmdc:mga0n895_21021_c1 3300050512 Bacteria 6098
310 nmdc:mga0n895_411649_c1 3300050512 Bacteria 1367
311 nmdc:mga0n895_4514_c1 3300050512 Bacteria 11448
312 nmdc:mga0n895_56474_c1 3300050512 Bacteria 3868
313 nmdc:mga0rr50_10745_c1 3300050513 Bacteria 5831
314 nmdc:mga0rr50_14752_c1 3300050513 Bacteria 5137
315 nmdc:mga0rr50_151546_c1 3300050513 Bacteria 1874
316 nmdc:mga0rr50_25669_c1 3300050513 Bacteria 4099
317 nmdc:mga0rr50_25714_c1 3300050513 Bacteria 4097
318 nmdc:mga0rr50_48125_c1 3300050513 Unclassified 3150
319 nmdc:mga08x19_24756_c1 3300050514 Bacteria 3734
320 nmdc:mga08x19_5061_c1 3300050514 Bacteria 7797
321 nmdc:mga08x19_8031_c1 3300050514 Bacteria 6272
322 nmdc:mga08x19_93_c1 3300050514 Bacteria 79849
323 nmdc:mga0a205_198571_c1 3300050515 Bacteria 1897
324 nmdc:mga0a205_27895_c1 3300050515 Bacteria 5394
325 Ga0501082_0000143 3300060353 Bacteria 59481
326 Ga0070708_100111442
327 Ga0065715_10094781
328 Ga0070683_100084895
329 Ga0068869_100059780
330 Ga0070660_100047290
331 Ga0070660_100217522
332 Ga0070671_100013912
333 Ga0070659_100027871
334 Ga0070667_100000846
335 Ga0070709_10025821
336 Ga0070713_100004475
337 Ga0070713_100078947
338 Ga0070713_100207842
339 Ga0070710_10011061
340 Ga0070711_100001028
341 Ga0070711_100024199
342 Ga0070711_100026110
343 Ga0070711_100064215
344 Ga0070711_100094043
345 Ga0070705_100017211
346 Ga0070705_100019648
347 Ga0070694_100047305
348 Ga0070708_100000687
349 Ga0070708_100001048
350 Ga0070708_100010337
351 Ga0070708_100016424
352 Ga0070708_100041610
353 Ga0070708_100043323
354 Ga0070681_10015431
355 Ga0068867_100037006
356 Ga0070706_100028501
357 Ga0070707_100006919
358 Ga0070707_100010874
359 Ga0070707_100068081
360 Ga0070698_100004369
361 Ga0070698_100014120
362 Ga0070698_100032469
363 Ga0070698_100033308
364 Ga0070698_100036195
365 Ga0070699_100001205
366 Ga0070699_100030391
367 Ga0070699_100033109
368 Ga0070699_100042787
369 Ga0070679_100080361
370 Ga0070679_100251098
371 Ga0070697_100000634
372 Ga0070697_100003668
373 Ga0070697_100005588
374 Ga0070697_100009429
375 Ga0070697_100066876
376 Ga0070697_100069577
377 Ga0070697_100081625
378 Ga0070697_100159348
379 Ga0068853_100045667
380 Ga0070686_100026473
381 Ga0070695_100004105
382 Ga0070695_100013250
383 Ga0070695_100020087
384 Ga0070695_100022487
385 Ga0070696_100000745
386 Ga0070696_100012068
387 Ga0070696_100028673
388 Ga0070696_100237126
389 Ga0070693_100000089
390 Ga0070665_100015002
391 Ga0070704_100016945
392 Ga0070704_100030202
393 Ga0068855_100023599
394 Ga0068856_100001855
395 Ga0068856_100013168
396 Ga0068866_10008037
397 Ga0068863_100031054
398 Ga0068858_100116046
399 Ga0068862_100086652
400 Ga0081455_10087153
401 Ga0081539_10000021
402 Ga0070717_10088668
403 Ga0070715_10001454
404 Ga0070716_100000837
405 Ga0070716_100001243
406 Ga0070716_100001383
407 Ga0070716_100002633
408 Ga0070716_100003508
409 Ga0070716_100024763
410 Ga0070712_100011225
411 Ga0070712_100018529
412 Ga0070712_100022937
413 Ga0070712_100030733
414 Ga0070712_100046466
415 Ga0070712_100119635
416 Ga0070712_100169105
417 Ga0097621_100018037
418 Ga0097621_100026224
419 Ga0097621_100096941
420 Ga0068871_100002629
421 Ga0068871_100013726
422 Ga0068871_100044802
423 Ga0075428_100011707
424 Ga0075430_100103847
425 Ga0075431_100013084
426 Ga0075431_100034218
427 Ga0075431_100059788
428 Ga0075433_10018051
429 Ga0075434_100030659
430 Ga0075434_100043112
431 Ga0075434_100053884
432 Ga0075436_100004180
433 Ga0075436_100004537
434 Ga0075436_100020627
435 Ga0075436_100028758
436 Ga0075436_100083852
437 Ga0075435_100033519
438 Ga0075435_100077711
439 Ga0075435_100081436
440 Ga0075435_100083726
441 Ga0099794_10001073
442 Ga0099794_10001956
443 Ga0099794_10004399
444 Ga0099794_10005460
445 Ga0099794_10005981
446 Ga0099794_10006486
447 Ga0099794_10006547
448 Ga0099794_10007587
449 Ga0099794_10023626
450 Ga0099794_10033463
451 Ga0099794_10037940
452 Ga0099795_10000532
453 Ga0099795_10001955
454 Ga0099795_10043302
455 Ga0099795_10044313
456 Ga0105240_10008716
457 Ga0105245_10000076
458 Ga0105245_10027067
459 Ga0105245_10049563
460 Ga0105247_10039860
461 Ga0114129_10081432
462 Ga0114129_10100565
463 Ga0114129_10189151
464 Ga0105248_10001112
465 Ga0105237_10013575
466 Ga0105237_10216538
467 Ga0105238_10246891
468 Ga0099796_10000378
469 Ga0105239_10359695
470 Ga0157369_10001600
471 Ga0157369_10025132
472 Ga0157369_10088670
473 Ga0157369_10134063
474 Ga0157374_10002729
475 Ga0157374_10003794
476 Ga0157374_10222133
477 Ga0157378_10000402
478 Ga0157378_10013230
479 Ga0157372_10093663
480 Ga0157375_10097590
481 Ga0157379_10007220
482 Ga0157379_10037087
483 Ga0157376_10000004
484 Ga0157376_10007331
485 Ga0213872_10000725
486 Ga0213876_10029405
487 Ga0213876_10100452
488 Ga0213875_10000027
489 Ga0213875_10002961
490 Ga0213875_10009357
491 Ga0213875_10015103
492 Ga0213875_10046537
493 Ga0207685_10000190
494 Ga0207685_10009227
495 Ga0207699_10003104
496 Ga0207699_10014044
497 Ga0207645_10000285
498 Ga0207684_10001438
499 Ga0207684_10016801
500 Ga0207654_10017318
501 Ga0207707_10071487
502 Ga0207695_10032871
503 Ga0207671_10136688
504 Ga0207693_10003813
505 Ga0207693_10004466
506 Ga0207693_10068163
507 Ga0207693_10117640
508 Ga0207693_10159355
509 Ga0207663_10014380
510 Ga0207663_10028610
511 Ga0207663_10046324
512 Ga0207663_10070853
513 Ga0207657_10080702
514 Ga0207657_10144594
515 Ga0207646_10001829
516 Ga0207646_10002208
517 Ga0207646_10074974
518 Ga0207681_10150627
519 Ga0207687_10000104
520 Ga0207700_10012563
521 Ga0207700_10028699
522 Ga0207644_10026865
523 Ga0207665_10000103
524 Ga0207665_10002558
525 Ga0207665_10004040
526 Ga0207665_10004700
527 Ga0207665_10034976
528 Ga0207665_10043849
529 Ga0207665_10092594
530 Ga0207691_10090248
531 Ga0207689_10008848
532 Ga0207667_10021250
533 Ga0207667_10025590
534 Ga0207703_10030596
535 Ga0207702_10001949
536 Ga0207702_10051985
537 Ga0209588_1001427
538 Ga0209588_1003702
539 Ga0209588_1006537
540 Ga0209588_1008440
541 Ga0209588_1012873
542 Ga0265354_1000050
543 Ga0265356_1001501
544 Ga0265355_1000052
545 Ga0268266_10000366
546 Ga0268266_10048016
547 Ga0268265_10057790
548 Ga0268264_10048806
549 Ga0265338_10020367
550 Ga0265762_1007408
551 Ga0265762_1015273
552 Ga0265770_1000847
553 Ga0265765_1000839
554 Ga0265760_10001542
555 Ga0265760_10005050
556 Ga0316212_1002332
557 Ga0373926_0010756
558 Ga0373934_0011451
559 Ga0373953_0043623
560 Ga0373954_0006899
561 Ga0373956_0015107
562 Ga0373957_0018707
563 Ga0373946_0005481
564 Ga0373955_0023753
565 Ga0373931_0012703
566 Ga0373935_0018284
567 Ga0373935_0080329
568 Ga0373927_0003602
569 Ga0373927_0012841
570 Ga0373933_0000737
571 Ga0373947_0049711
572 Ga0373947_0122543
573 Ga0373937_0002826
574 Ga0373925_0009656
575 Ga0373925_0010331
576 Ga0373925_0076930
577 Ga0373925_0087084
578 Ga0395905_0202027
579 Ga0436364_0106138
580 Ga0436364_0281120
581 Ga0436364_0478514
582 Ga0436364_0613847
583 Ga0436364_0688515
584 Ga0436364_0695273
585 Ga0436364_0754760
586 Ga0436364_1368348
587 Ga0436364_1477153
588 Ga0395901_0215198
589 Ga0436365_0101032
590 Ga0436365_1295235
591 Ga0436365_1335820
592 Ga0436361_0815288
593 Ga0436363_0885577
594 Ga0436363_1352701
595 Ga0436363_1447159
596 Ga0451576_0196676
597 Ga0495651_0046517
598 Ga0495651_0169812
599 Ga0495580_0005084
600 Ga0495582_0000116
601 Ga0495582_0000244
602 Ga0495662_0014538
603 Ga0495594_0098893
604 Ga0495608_0029056
605 Ga0495628_0040476
606 Ga0495630_0070919
607 Ga0495666_0033989
608 Ga0495640_0004922
609 Ga0495586_0010945
610 Ga0495587_0001796
611 Ga0495587_0052956
612 Ga0495634_0022135
613 Ga0495658_0027032
614 Ga0495674_0026438
615 Ga0495614_0015239
616 Ga0496100_0205701
617 Ga0496101_0030802
618 Ga0496102_0006748
619 Ga0496102_0062909
620 Ga0496102_0228920
621 Ga0496103_0005406
622 Ga0496104_0187914
623 Ga0496106_0006353
624 Ga0496112_0032291
625 Ga0496114_0017337
626 Ga0496115_0006607
627 Ga0496115_0031552
628 Ga0496115_0111331
629 nmdc:mga05p37_5992_c1
630 nmdc:mga05p37_66583_c1
631 nmdc:mga05p37_77004_c1
632 nmdc:mga09592_64927_c1
633 nmdc:mga06r32_5415_c1
634 nmdc:mga0n895_21021_c1
635 nmdc:mga0n895_411649_c1
636 nmdc:mga0n895_4514_c1
637 nmdc:mga0n895_56474_c1
638 nmdc:mga0rr50_10745_c1
639 nmdc:mga0rr50_14752_c1
640 nmdc:mga0rr50_151546_c1
641 nmdc:mga0rr50_25669_c1
642 nmdc:mga0rr50_25714_c1
643 nmdc:mga0rr50_48125_c1
644 nmdc:mga08x19_24756_c1
645 nmdc:mga08x19_5061_c1
646 nmdc:mga08x19_8031_c1
647 nmdc:mga08x19_93_c1
648 nmdc:mga0a205_198571_c1
649 nmdc:mga0a205_27895_c1
650 Ga0501082_0000143

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

37

67

0.97

PF22366

NDH2_C

NDH2 C-terminal domain

383

444

0.94

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

33

359

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nwz-assembly1.cif.gz_A structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.9266 8 409
5kmq-assembly1.cif.gz_B the structure of i379e variant of type ii nadh dehydrogenase from caldalkalibacillus thermarum 0.9233 8 407
5kmp-assembly1.cif.gz_A the structure of g164e variant of type ii nadh dehydrogenase from caldalkalibacillus thermarum 0.9227 8 396
4nwz-assembly1.cif.gz_A structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.9221 8 409
4nwz-assembly4.cif.gz_D-3 structure of bacterial type ii nadh dehydrogenase from caldalkalibacillus thermarum at 2.5a resolution 0.9209 10 408
ID Description Score Start End Superfamily
af_P95200_9_428_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9637 6 415 3.50.50.100
af_P95200_9_428_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9389 6 415 3.50.50.100
af_I1KF65_1_317_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9334 28 314 3.50.50.100
af_I1KLC9_45_406_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.9306 1 314 3.50.50.100
af_A0A1D6LPC7_212_432_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9261 131 314 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A4Y3WH61-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9894 37 269 GO:0003954
GO:0006116
AF-A0A534PGG8-F1-model_v4 FAD-binding protein 0.9885 8 89 GO:0003955
GO:0016020
GO:0019646
AF-A0A528LZ48-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9884 32 200 GO:0003954
GO:0006116
AF-A0A5C7WJZ4-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9854 1 206 GO:0003954
GO:0006116
AF-A0A2V9B3W3-F1-model_v4 NADH:ubiquinone reductase (non-electrogenic) (EC 1.6.5.9) 0.9846 120 338 GO:0003954
GO:0006116

Map