F407678

General Info

Members Datasets Scaffolds Average Seq Length
325 183 650 464

Family's Representative Sequence

Representative Sequence 3300005343|Ga0070687_100005654|Ga0070687_1000056542
Length 485
Sequence MPSMTGIRTSTASADAASGGGAPGRPRIGLLGIMQELYDEMLPGITERQAGYARDVGEALSATVDVQVAEPARNRADVEQRVAEFEAAGVDGLLVVMLTYGPGMRVARALGGTRLPVCLANIQPVPQVTDAWDMADLTYNQGVHGAQDTANAMVRAGVRFHVVTDDWQADSFREAVGRWASAARAVTAWRSLKVAVFGYGMNEMGDIKVDETALLRTLGPQVHYVAPGLLYREVQAVSRDAIDAEIAEEDERFEIDPALSTEEREDHIRMQIALEKILRERGYGAYSTHFDAIADDGRFARLPMAAASTLMARGFGFAGEGDALTAALVAAGHKLLPDAHFTEMYAMDFPTDSILMSHMGEGNWRVARTDRKPRLIKRPLGIGGLADPPTILFQYQPGPATLATVFSLGGDRFRMLVSEGEVLDTEELPSLEMPYGHFRPDTGVRACLDAWLRLGGPHHQVMHLGRHLDRWRIFCELTGIELEVI

Samples

Sample ID Description Type Environment
1 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
55 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
85 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
86 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
87 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
88 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
89 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
92 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
93 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
94 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
107 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
108 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
109 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
112 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
118 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
121 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
128 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
129 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
130 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
131 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
135 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
136 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
137 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
140 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
141 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
142 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
143 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
144 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
145 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
148 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
149 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
156 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
157 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
158 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
159 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
162 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
177 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
178 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
179 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
180 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
181 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
182 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
183 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.77
Metatranscriptomes 0
Isolates 1.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12
Rhizosphere 80.92
Stem 0
Stem Tuber 0
Unclassified 0.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070687_100005654 3300005343 Bacteria 5071
2 Ga0070683_100042398 3300005329 Bacteria 4190
3 Ga0070682_100085980 3300005337 Bacteria 2047
4 Ga0070674_100047149 3300005356 Bacteria 2951
5 Ga0070688_100141409 3300005365 Bacteria 1635
6 Ga0070659_100156418 3300005366 Bacteria 1862
7 Ga0070709_10044356 3300005434 Bacteria 2753
8 Ga0070714_100116206 3300005435 Bacteria 2375
9 Ga0070713_100043802 3300005436 Bacteria 3661
10 Ga0070713_100112772 3300005436 Bacteria 2373
11 Ga0070710_10032478 3300005437 Bacteria 2828
12 Ga0070701_10026580 3300005438 Bacteria 2824
13 Ga0070711_100060333 3300005439 Bacteria 2636
14 Ga0070711_100061395 3300005439 Bacteria 2616
15 Ga0070706_100107696 3300005467 Bacteria 2593
16 Ga0070707_100033831 3300005468 Bacteria 4873
17 Ga0070698_100001247 3300005471 Bacteria 28403
18 Ga0070699_100031330 3300005518 Bacteria 4590
19 Ga0070684_100090556 3300005535 Bacteria 2720
20 Ga0070684_100230396 3300005535 Bacteria 1691
21 Ga0068853_100125360 3300005539 Bacteria 2294
22 Ga0070664_100020330 3300005564 Bacteria 5466
23 Ga0068857_100073983 3300005577 Bacteria 3036
24 Ga0068854_100044964 3300005578 Bacteria 3137
25 Ga0068856_100063343 3300005614 Bacteria 3653
26 Ga0068856_100074947 3300005614 Bacteria 3351
27 Ga0068856_100238462 3300005614 Bacteria 1834
28 Ga0070702_100061581 3300005615 Bacteria 2185
29 Ga0068864_100021452 3300005618 Bacteria 5412
30 Ga0068864_100076882 3300005618 Bacteria 2918
31 Ga0068864_100093664 3300005618 Bacteria 2654
32 Ga0068866_10059478 3300005718 Bacteria 1977
33 Ga0068866_10070681 3300005718 Bacteria 1843
34 Ga0068870_10059396 3300005840 Bacteria 2050
35 Ga0081455_10008755 3300005937 Bacteria 10476
36 Ga0081455_10024931 3300005937 Bacteria 5528
37 Ga0081538_10019183 3300005981 Bacteria 5097
38 Ga0081538_10025888 3300005981 Bacteria 4122
39 Ga0081538_10035797 3300005981 Bacteria 3254
40 Ga0081539_10021762 3300005985 Bacteria 4269
41 Ga0070717_10019203 3300006028 Bacteria 5357
42 Ga0070715_10000544 3300006163 Bacteria 9908
43 Ga0070715_10019144 3300006163 Bacteria 2620
44 Ga0070715_10049688 3300006163 Bacteria 1798
45 Ga0070716_100103101 3300006173 Bacteria 1753
46 Ga0070712_100056342 3300006175 Bacteria 2757
47 Ga0097621_100118988 3300006237 Bacteria 2239
48 Ga0075428_100000121 3300006844 Bacteria 67666
49 Ga0075428_100017927 3300006844 Bacteria 7824
50 Ga0075430_100002428 3300006846 Bacteria 15512
51 Ga0075430_100087593 3300006846 Bacteria 2606
52 Ga0075431_100018551 3300006847 Bacteria 7087
53 Ga0075429_100008977 3300006880 Bacteria 8683
54 Ga0111539_10058116 3300009094 Bacteria 4590
55 Ga0105245_10003765 3300009098 Bacteria 13499
56 Ga0105245_10007230 3300009098 Bacteria 9728
57 Ga0114129_10005153 3300009147 Bacteria 18399
58 Ga0105243_10002045 3300009148 Bacteria 17094
59 Ga0105243_10004123 3300009148 Bacteria 11554
60 Ga0105242_10054369 3300009176 Bacteria 3272
61 Ga0105237_10176210 3300009545 Bacteria 2138
62 Ga0105249_10223374 3300009553 Bacteria 1854
63 Ga0157369_10110987 3300013105 Bacteria 2915
64 Ga0157374_10026734 3300013296 Bacteria 5196
65 Ga0163162_10125249 3300013306 Bacteria 2675
66 Ga0163163_10068381 3300014325 Bacteria 3534
67 Ga0163163_10089462 3300014325 Bacteria 3091
68 Ga0163163_10121643 3300014325 Bacteria 2644
69 Ga0157380_10007189 3300014326 Bacteria 7889
70 Ga0157380_10111409 3300014326 Bacteria 2300
71 Ga0157379_10012009 3300014968 Bacteria 7565
72 Ga0157379_10033841 3300014968 Bacteria 4557
73 Ga0157376_10009117 3300014969 Bacteria 7193
74 Ga0213876_10042408 3300021384 Bacteria 2404
75 Ga0213875_10002644 3300021388 Bacteria 10597
76 Ga0213875_10023361 3300021388 Bacteria 2953
77 Ga0213875_10033609 3300021388 Bacteria 2423
78 Ga0207692_10001157 3300025898 Bacteria 9740
79 Ga0207692_10005655 3300025898 Bacteria 5019
80 Ga0207692_10035711 3300025898 Bacteria 2417
81 Ga0207685_10015072 3300025905 Bacteria 2440
82 Ga0207699_10003373 3300025906 Bacteria 7615
83 Ga0207699_10005232 3300025906 Bacteria 6209
84 Ga0207699_10076700 3300025906 Bacteria 2060
85 Ga0207684_10008075 3300025910 Bacteria 9389
86 Ga0207684_10039723 3300025910 Bacteria 3990
87 Ga0207693_10009627 3300025915 Bacteria 7867
88 Ga0207693_10012679 3300025915 Bacteria 6807
89 Ga0207693_10057772 3300025915 Bacteria 3040
90 Ga0207693_10059586 3300025915 Bacteria 2990
91 Ga0207663_10011215 3300025916 Bacteria 4805
92 Ga0207663_10015203 3300025916 Bacteria 4239
93 Ga0207660_10210687 3300025917 Bacteria 1522
94 Ga0207646_10000511 3300025922 Bacteria 51827
95 Ga0207646_10014472 3300025922 Bacteria 7491
96 Ga0207687_10220202 3300025927 Bacteria 1494
97 Ga0207700_10002282 3300025928 Bacteria 11008
98 Ga0207700_10025382 3300025928 Bacteria 4113
99 Ga0207700_10059823 3300025928 Bacteria 2882
100 Ga0207664_10004113 3300025929 Bacteria 9823
101 Ga0207664_10005852 3300025929 Bacteria 8410
102 Ga0207664_10104311 3300025929 Bacteria 2347
103 Ga0207664_10159594 3300025929 Bacteria 1922
104 Ga0207665_10002597 3300025939 Bacteria 12146
105 Ga0207665_10015147 3300025939 Bacteria 5064
106 Ga0207661_10073645 3300025944 Bacteria 2798
107 Ga0207679_10036075 3300025945 Bacteria 3504
108 Ga0207679_10049057 3300025945 Bacteria 3078
109 Ga0207703_10202787 3300026035 Bacteria 1763
110 Ga0207678_10202526 3300026067 Bacteria 1697
111 Ga0207702_10048861 3300026078 Bacteria 3568
112 Ga0207676_10063516 3300026095 Bacteria 2933
113 Ga0207674_10103183 3300026116 Bacteria 2831
114 Ga0207674_10179945 3300026116 Bacteria 2066
115 Ga0207675_100168938 3300026118 Bacteria 2090
116 Ga0207683_10015770 3300026121 Bacteria 6431
117 Ga0207683_10141452 3300026121 Bacteria 2168
118 Ga0207428_10030935 3300027907 Bacteria 4422
119 Ga0268264_10065504 3300028381 Bacteria 3061
120 Ga0307515_10043688 3300028794 Bacteria 6956
121 Ga0265338_10011383 3300028800 Bacteria 10285
122 Ga0265316_10000944 3300031344 Bacteria 31683
123 Ga0307408_100193428 3300031548 Bacteria 1641
124 Ga0307406_10137386 3300031901 Bacteria 1725
125 Ga0307409_100166240 3300031995 Bacteria 1936
126 Ga0373938_0014001 3300034957 Bacteria 1532
127 Ga0373944_0030858 3300035089 Bacteria 1609
128 Ga0373932_0008216 3300035112 Bacteria 2493
129 Ga0373941_0011068 3300035115 Bacteria 2323
130 Ga0373953_0026517 3300035117 Bacteria 2220
131 Ga0373954_0027222 3300035118 Bacteria 2623
132 Ga0373956_0002604 3300035119 Bacteria 7313
133 Ga0373957_0010593 3300035120 Bacteria 3053
134 Ga0373955_0071963 3300035172 Bacteria 1935
135 Ga0373942_0010198 3300035207 Bacteria 2207
136 Ga0373924_0038426 3300035410 Bacteria 1952
137 Ga0373933_0004771 3300035724 Bacteria 7410
138 Ga0373937_0004966 3300036401 Bacteria 11311
139 Ga0373937_0007368 3300036401 Bacteria 9523
140 Ga0373937_0022216 3300036401 Bacteria 5701
141 Ga0373925_0024177 3300037068 Bacteria 4434
142 Ga0373925_0190861 3300037068 Bacteria 1625
143 Ga0395898_0010678 3300037466 Bacteria 9596
144 Ga0395898_0042734 3300037466 Bacteria 4470
145 Ga0395898_0282955 3300037466 Bacteria 1582
146 Ga0436364_0395778 3300037853 Bacteria 30492
147 Ga0436364_0408115 3300037853 Bacteria 4138
148 Ga0436364_0534684 3300037853 Bacteria 41240
149 Ga0436364_0538583 3300037853 Bacteria 7393
150 Ga0436364_0563740 3300037853 Bacteria 11032
151 Ga0436364_0923878 3300037853 Bacteria 7239
152 Ga0395901_0024749 3300038443 Bacteria 6164
153 Ga0395901_0045386 3300038443 Bacteria 4560
154 Ga0395901_0152702 3300038443 Bacteria 2426
155 Ga0436365_0049077 3300039437 Bacteria 1594
156 Ga0436365_0226253 3300039437 Bacteria 24079
157 Ga0436365_0372186 3300039437 Bacteria 2405
158 Ga0436365_0710011 3300039437 Bacteria 10395
159 Ga0436365_1187662 3300039437 Bacteria 5936
160 Ga0436363_0023265 3300039450 Bacteria 1441
161 Ga0436363_0080092 3300039450 Bacteria 7699
162 Ga0436363_0512974 3300039450 Bacteria 7243
163 Ga0436362_0167268 3300039453 Bacteria 1605
164 Ga0436362_0482592 3300039453 Bacteria 3231
165 Ga0436362_0944285 3300039453 Bacteria 6871
166 Ga0453683_0015846 3300044673 Unclassified 4873
167 Ga0466961_0032353 3300044693 Bacteria 3360
168 Ga0466963_0001534 3300044694 Bacteria 12523
169 Ga0466963_0001651 3300044694 Bacteria 12159
170 Ga0466963_0025545 3300044694 Bacteria 3768
171 Ga0466963_0044658 3300044694 Bacteria 2917
172 Ga0466963_0108368 3300044694 Bacteria 1905
173 Ga0453684_0007243 3300044712 Bacteria 20541
174 Ga0466971_0023358 3300044719 Bacteria 2756
175 Ga0466970_0020600 3300044765 Bacteria 3429
176 Ga0466957_0044859 3300044842 Bacteria 2680
177 Ga0466959_0008201 3300045049 Bacteria 7372
178 Ga0466959_0009366 3300045049 Bacteria 6961
179 Ga0466959_0037340 3300045049 Bacteria 3589
180 Ga0466959_0049382 3300045049 Bacteria 3091
181 Ga0466959_0085701 3300045049 Bacteria 2267
182 Ga0466958_0003850 3300045836 Bacteria 7847
183 Ga0466958_0008657 3300045836 Bacteria 5651
184 Ga0466958_0023625 3300045836 Bacteria 3611
185 Ga0466958_0029003 3300045836 Bacteria 3283
186 Ga0466967_0001114 3300045976 Bacteria 14905
187 Ga0466967_0015634 3300045976 Bacteria 5955
188 Ga0466967_0029999 3300045976 Bacteria 4559
189 Ga0466967_0135777 3300045976 Bacteria 2287
190 Ga0466967_0197218 3300045976 Bacteria 1905
191 Ga0495592_0009299 3300046454 Bacteria 7391
192 Ga0495592_0025606 3300046454 Bacteria 4477
193 Ga0495592_0081977 3300046454 Bacteria 2332
194 Ga0495603_0010756 3300046455 Bacteria 5549
195 Ga0495603_0055246 3300046455 Bacteria 2353
196 Ga0495651_0002652 3300046462 Bacteria 13869
197 Ga0495651_0038658 3300046462 Bacteria 3716
198 Ga0495653_0013390 3300046463 Bacteria 6685
199 Ga0495653_0033705 3300046463 Bacteria 4054
200 Ga0495582_0121217 3300046473 Bacteria 1473
201 Ga0495664_0027065 3300046477 Bacteria 3342
202 Ga0495664_0081878 3300046477 Unclassified 1935
203 Ga0495584_0056001 3300046491 Bacteria 1984
204 Ga0495596_0017284 3300046500 Bacteria 2990
205 Ga0495608_0030138 3300046511 Bacteria 3675
206 Ga0495608_0047334 3300046511 Bacteria 2859
207 Ga0495618_0008511 3300046514 Bacteria 6203
208 Ga0495618_0008607 3300046514 Bacteria 6164
209 Ga0495628_0010884 3300046516 Bacteria 7699
210 Ga0495628_0210352 3300046516 Bacteria 1463
211 Ga0495630_0005980 3300046517 Bacteria 8602
212 Ga0495630_0189470 3300046517 Bacteria 1569
213 Ga0495652_0004945 3300046529 Bacteria 12632
214 Ga0495652_0044367 3300046529 Bacteria 3829
215 Ga0495665_0033288 3300046531 Bacteria 2757
216 Ga0495640_0006963 3300046533 Bacteria 8902
217 Ga0495640_0034647 3300046533 Bacteria 3577
218 Ga0495640_0049177 3300046533 Bacteria 2909
219 Ga0495586_0094634 3300046535 Bacteria 1653
220 Ga0495587_0062464 3300046536 Bacteria 2180
221 Ga0495645_0087805 3300046543 Bacteria 2224
222 Ga0495667_0000485 3300046559 Bacteria 25334
223 Ga0495667_0004404 3300046559 Bacteria 9497
224 Ga0495667_0025143 3300046559 Bacteria 4014
225 Ga0495667_0137067 3300046559 Bacteria 1578
226 Ga0495634_0015251 3300046642 Bacteria 5526
227 Ga0495634_0055817 3300046642 Bacteria 2640
228 Ga0495635_0005844 3300046663 Bacteria 8574
229 Ga0495635_0031621 3300046663 Bacteria 3673
230 Ga0495657_0003716 3300046675 Bacteria 12354
231 Ga0495657_0028202 3300046675 Bacteria 3952
232 Ga0495657_0050128 3300046675 Bacteria 2808
233 Ga0495599_0015941 3300046678 Bacteria 4664
234 Ga0495599_0072793 3300046678 Unclassified 2145
235 Ga0495623_0095138 3300046679 Bacteria 1821
236 Ga0495613_0036096 3300046689 Bacteria 3665
237 Ga0495613_0054728 3300046689 Bacteria 2933
238 Ga0495600_0006483 3300046809 Bacteria 7123
239 Ga0495600_0023726 3300046809 Bacteria 3946
240 Ga0495600_0074777 3300046809 Bacteria 2212
241 Ga0495581_0026320 3300047315 Bacteria 3373
242 Ga0495604_0013060 3300047317 Bacteria 6617
243 Ga0495604_0013654 3300047317 Bacteria 6477
244 Ga0495604_0017298 3300047317 Bacteria 5769
245 Ga0495604_0046494 3300047317 Bacteria 3383
246 Ga0495674_0007027 3300047319 Bacteria 10770
247 Ga0495674_0158549 3300047319 Bacteria 1894
248 Ga0495676_0171728 3300047321 Bacteria 1525
249 Ga0495680_0001410 3300047322 Bacteria 25933
250 Ga0495680_0006295 3300047322 Bacteria 11056
251 Ga0495680_0025918 3300047322 Bacteria 4845
252 Ga0495675_0005280 3300047444 Bacteria 7868
253 Ga0495675_0006707 3300047444 Bacteria 7055
254 Ga0495684_0014715 3300047471 Bacteria 6023
255 Ga0495684_0118358 3300047471 Bacteria 1996
256 Ga0495602_0019551 3300048088 Bacteria 6719
257 Ga0495602_0122875 3300048088 Bacteria 2085
258 Ga0495602_0138418 3300048088 Bacteria 1930
259 Ga0496100_0014597 3300048903 Bacteria 4565
260 Ga0496100_0023136 3300048903 Bacteria 3770
261 Ga0496100_0056259 3300048903 Bacteria 2573
262 Ga0496100_0081884 3300048903 Bacteria 2181
263 Ga0496101_0167175 3300048904 Bacteria 1689
264 Ga0496102_0200617 3300048905 Bacteria 1880
265 Ga0496103_0059062 3300048906 Bacteria 2383
266 Ga0496104_0001684 3300048907 Bacteria 19097
267 Ga0496104_0003731 3300048907 Bacteria 13158
268 Ga0496104_0020592 3300048907 Bacteria 6047
269 Ga0496104_0040555 3300048907 Bacteria 4364
270 Ga0496104_0054839 3300048907 Bacteria 3768
271 Ga0496105_0028585 3300048908 Bacteria 4559
272 Ga0496105_0030991 3300048908 Bacteria 4384
273 Ga0496105_0095556 3300048908 Bacteria 2455
274 Ga0496105_0225305 3300048908 Bacteria 1525
275 Ga0496106_0035899 3300048909 Bacteria 3708
276 Ga0496106_0053038 3300048909 Bacteria 3061
277 Ga0496106_0057691 3300048909 Bacteria 2936
278 Ga0496107_0089436 3300048910 Bacteria 2248
279 Ga0496108_0002572 3300048911 Bacteria 14535
280 Ga0496108_0014511 3300048911 Bacteria 6432
281 Ga0496109_0005577 3300048912 Bacteria 10536
282 Ga0496109_0215082 3300048912 Bacteria 1807
283 Ga0496110_0003891 3300048913 Bacteria 11491
284 Ga0496110_0018284 3300048913 Bacteria 5876
285 Ga0496110_0033361 3300048913 Bacteria 4453
286 Ga0496110_0123471 3300048913 Bacteria 2335
287 Ga0496111_0010591 3300048914 Bacteria 6195
288 Ga0496111_0028242 3300048914 Bacteria 3975
289 Ga0496112_0000184 3300048915 Bacteria 40185
290 Ga0496112_0004270 3300048915 Bacteria 12063
291 Ga0496112_0024424 3300048915 Bacteria 5787
292 Ga0496112_0037165 3300048915 Bacteria 4753
293 Ga0496113_0113647 3300048916 Bacteria 2110
294 Ga0496114_0058365 3300048917 Bacteria 3222
295 Ga0496114_0170890 3300048917 Bacteria 1894
296 Ga0496115_0025478 3300048918 Bacteria 4605
297 Ga0496115_0152288 3300048918 Bacteria 1910
298 Ga0501039_0005264 3300049575 Bacteria 9798
299 Ga0501041_0012272 3300049577 Bacteria 5076
300 Ga0501042_0036663 3300049578 Bacteria 3479
301 Ga0501042_0167312 3300049578 Bacteria 1586
302 Ga0501048_0056417 3300049582 Bacteria 2787
303 Ga0501071_0034523 3300049587 Bacteria 3601
304 Ga0501072_0081967 3300049588 Bacteria 2557
305 nmdc:mga09592_14241_c1 3300050508 Bacteria 6493
306 nmdc:mga0qj67_11974_c1 3300050509 Bacteria 6517
307 nmdc:mga0qj67_206553_c1 3300050509 Bacteria 1595
308 nmdc:mga0qj67_5644_c1 3300050509 Bacteria 9150
309 nmdc:mga06r32_188595_c1 3300050510 Bacteria 2049
310 nmdc:mga06r32_9976_c1 3300050510 Bacteria 8568
311 nmdc:mga08y16_164672_c1 3300050511 Bacteria 2303
312 nmdc:mga08y16_20148_c1 3300050511 Bacteria 7039
313 nmdc:mga0n895_120160_c1 3300050512 Bacteria 2649
314 Ga0495601_0055766 3300053077 Bacteria 2502
315 Ga0495595_0002522 3300053084 Bacteria 7187
316 Ga0495619_0019759 3300053085 Bacteria 4286
317 Ga0495619_0023380 3300053085 Bacteria 3962
318 Ga0495619_0027491 3300053085 Bacteria 3664
319 Ga0466962_0008941 3300061719 Bacteria 4799
320 Ga0466962_0024142 3300061719 Bacteria 2921
321 Ga0530510_0051071 3300061734 Bacteria 2987
322 2523467384 2523231067 Bacteria 5230452
323 2739347822 2738543031 Bacteria 5769731
324 2861524980 2861520306 Bacteria 8348283
325 8056066093 8056060235 Bacteria 7259403
326 Ga0070687_100005654
327 Ga0070683_100042398
328 Ga0070682_100085980
329 Ga0070674_100047149
330 Ga0070688_100141409
331 Ga0070659_100156418
332 Ga0070709_10044356
333 Ga0070714_100116206
334 Ga0070713_100043802
335 Ga0070713_100112772
336 Ga0070710_10032478
337 Ga0070701_10026580
338 Ga0070711_100060333
339 Ga0070711_100061395
340 Ga0070706_100107696
341 Ga0070707_100033831
342 Ga0070698_100001247
343 Ga0070699_100031330
344 Ga0070684_100090556
345 Ga0070684_100230396
346 Ga0068853_100125360
347 Ga0070664_100020330
348 Ga0068857_100073983
349 Ga0068854_100044964
350 Ga0068856_100063343
351 Ga0068856_100074947
352 Ga0068856_100238462
353 Ga0070702_100061581
354 Ga0068864_100021452
355 Ga0068864_100076882
356 Ga0068864_100093664
357 Ga0068866_10059478
358 Ga0068866_10070681
359 Ga0068870_10059396
360 Ga0081455_10008755
361 Ga0081455_10024931
362 Ga0081538_10019183
363 Ga0081538_10025888
364 Ga0081538_10035797
365 Ga0081539_10021762
366 Ga0070717_10019203
367 Ga0070715_10000544
368 Ga0070715_10019144
369 Ga0070715_10049688
370 Ga0070716_100103101
371 Ga0070712_100056342
372 Ga0097621_100118988
373 Ga0075428_100000121
374 Ga0075428_100017927
375 Ga0075430_100002428
376 Ga0075430_100087593
377 Ga0075431_100018551
378 Ga0075429_100008977
379 Ga0111539_10058116
380 Ga0105245_10003765
381 Ga0105245_10007230
382 Ga0114129_10005153
383 Ga0105243_10002045
384 Ga0105243_10004123
385 Ga0105242_10054369
386 Ga0105237_10176210
387 Ga0105249_10223374
388 Ga0157369_10110987
389 Ga0157374_10026734
390 Ga0163162_10125249
391 Ga0163163_10068381
392 Ga0163163_10089462
393 Ga0163163_10121643
394 Ga0157380_10007189
395 Ga0157380_10111409
396 Ga0157379_10012009
397 Ga0157379_10033841
398 Ga0157376_10009117
399 Ga0213876_10042408
400 Ga0213875_10002644
401 Ga0213875_10023361
402 Ga0213875_10033609
403 Ga0207692_10001157
404 Ga0207692_10005655
405 Ga0207692_10035711
406 Ga0207685_10015072
407 Ga0207699_10003373
408 Ga0207699_10005232
409 Ga0207699_10076700
410 Ga0207684_10008075
411 Ga0207684_10039723
412 Ga0207693_10009627
413 Ga0207693_10012679
414 Ga0207693_10057772
415 Ga0207693_10059586
416 Ga0207663_10011215
417 Ga0207663_10015203
418 Ga0207660_10210687
419 Ga0207646_10000511
420 Ga0207646_10014472
421 Ga0207687_10220202
422 Ga0207700_10002282
423 Ga0207700_10025382
424 Ga0207700_10059823
425 Ga0207664_10004113
426 Ga0207664_10005852
427 Ga0207664_10104311
428 Ga0207664_10159594
429 Ga0207665_10002597
430 Ga0207665_10015147
431 Ga0207661_10073645
432 Ga0207679_10036075
433 Ga0207679_10049057
434 Ga0207703_10202787
435 Ga0207678_10202526
436 Ga0207702_10048861
437 Ga0207676_10063516
438 Ga0207674_10103183
439 Ga0207674_10179945
440 Ga0207675_100168938
441 Ga0207683_10015770
442 Ga0207683_10141452
443 Ga0207428_10030935
444 Ga0268264_10065504
445 Ga0307515_10043688
446 Ga0265338_10011383
447 Ga0265316_10000944
448 Ga0307408_100193428
449 Ga0307406_10137386
450 Ga0307409_100166240
451 Ga0373938_0014001
452 Ga0373944_0030858
453 Ga0373932_0008216
454 Ga0373941_0011068
455 Ga0373953_0026517
456 Ga0373954_0027222
457 Ga0373956_0002604
458 Ga0373957_0010593
459 Ga0373955_0071963
460 Ga0373942_0010198
461 Ga0373924_0038426
462 Ga0373933_0004771
463 Ga0373937_0004966
464 Ga0373937_0007368
465 Ga0373937_0022216
466 Ga0373925_0024177
467 Ga0373925_0190861
468 Ga0395898_0010678
469 Ga0395898_0042734
470 Ga0395898_0282955
471 Ga0436364_0395778
472 Ga0436364_0408115
473 Ga0436364_0534684
474 Ga0436364_0538583
475 Ga0436364_0563740
476 Ga0436364_0923878
477 Ga0395901_0024749
478 Ga0395901_0045386
479 Ga0395901_0152702
480 Ga0436365_0049077
481 Ga0436365_0226253
482 Ga0436365_0372186
483 Ga0436365_0710011
484 Ga0436365_1187662
485 Ga0436363_0023265
486 Ga0436363_0080092
487 Ga0436363_0512974
488 Ga0436362_0167268
489 Ga0436362_0482592
490 Ga0436362_0944285
491 Ga0453683_0015846
492 Ga0466961_0032353
493 Ga0466963_0001534
494 Ga0466963_0001651
495 Ga0466963_0025545
496 Ga0466963_0044658
497 Ga0466963_0108368
498 Ga0453684_0007243
499 Ga0466971_0023358
500 Ga0466970_0020600
501 Ga0466957_0044859
502 Ga0466959_0008201
503 Ga0466959_0009366
504 Ga0466959_0037340
505 Ga0466959_0049382
506 Ga0466959_0085701
507 Ga0466958_0003850
508 Ga0466958_0008657
509 Ga0466958_0023625
510 Ga0466958_0029003
511 Ga0466967_0001114
512 Ga0466967_0015634
513 Ga0466967_0029999
514 Ga0466967_0135777
515 Ga0466967_0197218
516 Ga0495592_0009299
517 Ga0495592_0025606
518 Ga0495592_0081977
519 Ga0495603_0010756
520 Ga0495603_0055246
521 Ga0495651_0002652
522 Ga0495651_0038658
523 Ga0495653_0013390
524 Ga0495653_0033705
525 Ga0495582_0121217
526 Ga0495664_0027065
527 Ga0495664_0081878
528 Ga0495584_0056001
529 Ga0495596_0017284
530 Ga0495608_0030138
531 Ga0495608_0047334
532 Ga0495618_0008511
533 Ga0495618_0008607
534 Ga0495628_0010884
535 Ga0495628_0210352
536 Ga0495630_0005980
537 Ga0495630_0189470
538 Ga0495652_0004945
539 Ga0495652_0044367
540 Ga0495665_0033288
541 Ga0495640_0006963
542 Ga0495640_0034647
543 Ga0495640_0049177
544 Ga0495586_0094634
545 Ga0495587_0062464
546 Ga0495645_0087805
547 Ga0495667_0000485
548 Ga0495667_0004404
549 Ga0495667_0025143
550 Ga0495667_0137067
551 Ga0495634_0015251
552 Ga0495634_0055817
553 Ga0495635_0005844
554 Ga0495635_0031621
555 Ga0495657_0003716
556 Ga0495657_0028202
557 Ga0495657_0050128
558 Ga0495599_0015941
559 Ga0495599_0072793
560 Ga0495623_0095138
561 Ga0495613_0036096
562 Ga0495613_0054728
563 Ga0495600_0006483
564 Ga0495600_0023726
565 Ga0495600_0074777
566 Ga0495581_0026320
567 Ga0495604_0013060
568 Ga0495604_0013654
569 Ga0495604_0017298
570 Ga0495604_0046494
571 Ga0495674_0007027
572 Ga0495674_0158549
573 Ga0495676_0171728
574 Ga0495680_0001410
575 Ga0495680_0006295
576 Ga0495680_0025918
577 Ga0495675_0005280
578 Ga0495675_0006707
579 Ga0495684_0014715
580 Ga0495684_0118358
581 Ga0495602_0019551
582 Ga0495602_0122875
583 Ga0495602_0138418
584 Ga0496100_0014597
585 Ga0496100_0023136
586 Ga0496100_0056259
587 Ga0496100_0081884
588 Ga0496101_0167175
589 Ga0496102_0200617
590 Ga0496103_0059062
591 Ga0496104_0001684
592 Ga0496104_0003731
593 Ga0496104_0020592
594 Ga0496104_0040555
595 Ga0496104_0054839
596 Ga0496105_0028585
597 Ga0496105_0030991
598 Ga0496105_0095556
599 Ga0496105_0225305
600 Ga0496106_0035899
601 Ga0496106_0053038
602 Ga0496106_0057691
603 Ga0496107_0089436
604 Ga0496108_0002572
605 Ga0496108_0014511
606 Ga0496109_0005577
607 Ga0496109_0215082
608 Ga0496110_0003891
609 Ga0496110_0018284
610 Ga0496110_0033361
611 Ga0496110_0123471
612 Ga0496111_0010591
613 Ga0496111_0028242
614 Ga0496112_0000184
615 Ga0496112_0004270
616 Ga0496112_0024424
617 Ga0496112_0037165
618 Ga0496113_0113647
619 Ga0496114_0058365
620 Ga0496114_0170890
621 Ga0496115_0025478
622 Ga0496115_0152288
623 Ga0501039_0005264
624 Ga0501041_0012272
625 Ga0501042_0036663
626 Ga0501042_0167312
627 Ga0501048_0056417
628 Ga0501071_0034523
629 Ga0501072_0081967
630 nmdc:mga09592_14241_c1
631 nmdc:mga0qj67_11974_c1
632 nmdc:mga0qj67_206553_c1
633 nmdc:mga0qj67_5644_c1
634 nmdc:mga06r32_188595_c1
635 nmdc:mga06r32_9976_c1
636 nmdc:mga08y16_164672_c1
637 nmdc:mga08y16_20148_c1
638 nmdc:mga0n895_120160_c1
639 Ga0495601_0055766
640 Ga0495595_0002522
641 Ga0495619_0019759
642 Ga0495619_0023380
643 Ga0495619_0027491
644 Ga0466962_0008941
645 Ga0466962_0024142
646 Ga0530510_0051071
647 2523467384
648 2739347822
649 2861524980
650 8056066093

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11762

Arabinose_Iso_C

L-arabinose isomerase C-terminal domain

338

481

0.97

PF02610

Arabinose_Isome

L-arabinose isomerase

30

190

0.92

PF24856

193

336

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4f2d-assembly1.cif.gz_A crystal structure of escherichia coli l-arabinose isomerase (ecai) complexed with ribitol 0.7178 21 465
7cx7-assembly1.cif.gz_C-2 crystal structure of arabinose isomerase from hybrid ai8 0.7173 20 465
7cx7-assembly1.cif.gz_F-2 crystal structure of arabinose isomerase from hybrid ai8 0.7164 20 465
7cyy-assembly1.cif.gz_A crystal structure of arabinose isomerase from hybrid ai8 with adonitol 0.7161 20 465
7chl-assembly1.cif.gz_D crystal structure of hybrid arabinose isomerase ai-10 0.7141 20 465
ID Description Score Start End Superfamily
4lqlD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8885 16 168 3.40.50.10940
4f2dC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.847 21 171 3.40.50.10940
1fuiF03 Alpha Beta;Alpha-Beta Barrel;L-fucose Isomerase; Chain A, domain 3;L-fucose/L-arabinose isomerase, C-terminal 0.8196 318 464 3.20.14.10
4lqlD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7792 16 168 3.40.50.10940
4f2dC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7529 21 171 3.40.50.10940
ID Description Score Start End GO Terms
AF-A0A524N9S6-F1-model_v4 Arabinose isomerase 0.9916 181 465 GO:0005829
GO:0008733
GO:0019569
GO:0046872
AF-A0A524N9S6-F1-model_v4 Arabinose isomerase 0.9848 181 465 GO:0005829
GO:0008733
GO:0019569
GO:0046872
AF-A0A644XY48-F1-model_v4 L-arabinose isomerase (EC 5.3.1.4) 0.9822 168 465 GO:0005829
GO:0008733
GO:0019569
GO:0046872
AF-A0A7C3W6S8-F1-model_v4 Arabinose isomerase 0.9764 165 465 GO:0005829
GO:0008733
GO:0019569
GO:0046872
AF-A0A3D5A3L1-F1-model_v4 L-arabinose isomerase C-terminal domain-containing protein 0.9716 170 465 GO:0005829
GO:0008733
GO:0019569
GO:0046872

Map