F407167

General Info

Members Datasets Scaffolds Average Seq Length
323 217 646 464

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8003830390|8003833172
Length 491
Sequence VIIGGGPAGYEAALVAAQLDADVTVVEADGAGGACVLSDCVPSKTFIASSGVVTGYRDTEEFGVHSDGLEAVTVDARAVHERVKRLALAQSADIHAKLLKAGVTFVAGTARLGEDALGHTHLVIVTPADGSEEYSIAASSVLVATGSTPRQLPTAVPDGERILTWRQVYDLPELPEHLIVVGSGVTGAEFASAYLAMGVEVTLVSSRDRVMPHEDADAASAIERVFRNRGMEILNNSRADAVRRTADGVEVELSDGRKVTGSHALIAVGSIPNTANLGLAEYGVELGRGGYVTVDRVSRTNVPGIYAAGDCTGVLLLASVAAMQGRIAMWHALGEAVRPLRLRTVAANVFTDPELATVGVSQDEVDAGKVPARQVMLPLSGNARAKMDDLSDGFVKLFCRPASGQVVGGVVVAGQVGGQAFDGGLEVGVEVDEVAQALAQPLQGHLLVAPAFDQLLDATVGEVHGVRPRARPGSGQGGWSDGPTRAGAGPW

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
41 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
64 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
67 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
68 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
69 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
70 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
71 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
79 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
90 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
91 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
92 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
93 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
94 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
95 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
96 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
97 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
98 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
99 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
100 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
101 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
102 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
103 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
104 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
105 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
112 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
118 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
119 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
122 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
126 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
127 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
146 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
147 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
148 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
149 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
153 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
154 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
155 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
156 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
157 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
158 2501939600 Micromonospora sp. L5 Isolate Unclassified
159 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
160 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
161 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
162 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
163 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
164 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
165 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
166 2643221615 Nocardioides sp. Root224 Isolate Unclassified
167 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
168 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
169 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
170 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
171 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
172 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
173 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
174 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
175 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
176 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
177 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
178 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
179 2855683550 Micromonospora sp. RP3T Isolate Unclassified
180 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
181 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
182 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
183 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
184 2858868258 Micromonospora sp. MH33 Isolate Unclassified
185 2858882152 Micromonospora noduli MED15 Isolate Nodule
186 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
187 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
188 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
189 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
190 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
191 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
192 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
193 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
194 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
195 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
196 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
197 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
198 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
199 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
200 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
201 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
202 2902582711 Micromonospora sp. AP08 Isolate Unclassified
203 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
204 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
205 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
206 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
207 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
208 649633069 Micromonospora sp. L5 Isolate Unclassified
209 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
210 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
211 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
212 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
213 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
214 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
215 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
216 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
217 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.8
Metatranscriptomes 0.31
Isolates 18.89

Biome Distribution

Category Percentage (%)
Aerial Root 0.31
Bulb 0
Endosphere 2.79
Nodule 1.86
Rhizoplane 7.43
Rhizosphere 70.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003111 3300003203 Bacteria 7803
2 JGI25406J46586_10020248 3300003203 Bacteria 2695
3 Ga0070683_100002971 3300005329 Bacteria 13595
4 Ga0070683_100012295 3300005329 Bacteria 7435
5 Ga0070683_100035730 3300005329 Bacteria 4543
6 Ga0070660_100079049 3300005339 Bacteria 2580
7 Ga0070661_100030364 3300005344 Bacteria 3903
8 Ga0070668_100004461 3300005347 Bacteria 10388
9 Ga0070675_100000194 3300005354 Bacteria 38282
10 Ga0070659_100032806 3300005366 Bacteria 4031
11 Ga0070700_100005482 3300005441 Bacteria 6729
12 Ga0070662_100026476 3300005457 Bacteria 4017
13 Ga0070681_10123719 3300005458 Bacteria 2519
14 Ga0070698_100002871 3300005471 Bacteria 18973
15 Ga0070679_100024476 3300005530 Bacteria 5916
16 Ga0070684_100030778 3300005535 Bacteria 4564
17 Ga0070665_100017622 3300005548 Bacteria 7172
18 Ga0070665_100145741 3300005548 Bacteria 2371
19 Ga0070664_100003747 3300005564 Bacteria 12262
20 Ga0070664_100053840 3300005564 Bacteria 3412
21 Ga0070664_100108242 3300005564 Bacteria 2423
22 Ga0068857_100006170 3300005577 Bacteria 10247
23 Ga0068864_100003191 3300005618 Bacteria 13560
24 Ga0068863_100094741 3300005841 Bacteria 2833
25 Ga0068863_100123349 3300005841 Bacteria 2471
26 Ga0068858_100092142 3300005842 Bacteria 2821
27 Ga0068860_100047665 3300005843 Bacteria 4084
28 Ga0068862_100004630 3300005844 Bacteria 11593
29 Ga0081540_1019486 3300005983 Bacteria 4118
30 Ga0081539_10000320 3300005985 Bacteria 106935
31 Ga0081539_10000837 3300005985 Bacteria 59104
32 Ga0081539_10005629 3300005985 Bacteria 12603
33 Ga0081539_10007604 3300005985 Bacteria 9790
34 Ga0081539_10020169 3300005985 Bacteria 4522
35 Ga0081539_10083121 3300005985 Bacteria 1677
36 Ga0075365_10005160 3300006038 Bacteria 7020
37 Ga0075364_10002272 3300006051 Bacteria 10780
38 Ga0070712_100187816 3300006175 Bacteria 1615
39 Ga0075428_100000669 3300006844 Bacteria 35178
40 Ga0075428_100029062 3300006844 Bacteria 6117
41 Ga0075428_100099735 3300006844 Bacteria 3167
42 Ga0075428_100223060 3300006844 Bacteria 2035
43 Ga0075430_100002894 3300006846 Bacteria 14361
44 Ga0075430_100006087 3300006846 Bacteria 10170
45 Ga0075431_100000513 3300006847 Bacteria 32457
46 Ga0075431_100002934 3300006847 Bacteria 16514
47 Ga0075431_100004909 3300006847 Bacteria 13173
48 Ga0075431_100026327 3300006847 Bacteria 5967
49 Ga0075431_100274707 3300006847 Bacteria 1707
50 Ga0075429_100045172 3300006880 Bacteria 3832
51 Ga0111539_10007714 3300009094 Bacteria 13747
52 Ga0105245_10010077 3300009098 Bacteria 8235
53 Ga0105245_10180558 3300009098 Bacteria 2016
54 Ga0114129_10000001 3300009147 Bacteria 292978
55 Ga0114129_10000011 3300009147 Bacteria 139000
56 Ga0114129_10017732 3300009147 Bacteria 10137
57 Ga0114129_10172758 3300009147 Bacteria 2945
58 Ga0105248_10218678 3300009177 Bacteria 2145
59 Ga0157370_10147088 3300013104 Bacteria 2193
60 Ga0157369_10013261 3300013105 Bacteria 9325
61 Ga0163163_10013251 3300014325 Bacteria 7541
62 Ga0157377_10022686 3300014745 Bacteria 3318
63 Ga0157379_10123820 3300014968 Bacteria 2326
64 Ga0206353_10555065 3300020082 Bacteria 2989
65 Ga0207713_1044712 3300025735 Bacteria 1816
66 Ga0207705_10023035 3300025909 Bacteria 4442
67 Ga0207660_10098779 3300025917 Bacteria 2178
68 Ga0207657_10124216 3300025919 Bacteria 2121
69 Ga0207652_10032068 3300025921 Bacteria 4413
70 Ga0207650_10112056 3300025925 Bacteria 2113
71 Ga0207659_10022279 3300025926 Bacteria 4216
72 Ga0207687_10005703 3300025927 Bacteria 8234
73 Ga0207687_10113081 3300025927 Bacteria 2019
74 Ga0207706_10018954 3300025933 Bacteria 6188
75 Ga0207711_10090647 3300025941 Bacteria 2688
76 Ga0207661_10002214 3300025944 Bacteria 13420
77 Ga0207661_10008993 3300025944 Bacteria 7156
78 Ga0207661_10010501 3300025944 Bacteria 6667
79 Ga0207679_10003381 3300025945 Bacteria 9849
80 Ga0207668_10020493 3300025972 Bacteria 4202
81 Ga0207677_10052848 3300026023 Bacteria 2762
82 Ga0207703_10035445 3300026035 Bacteria 3966
83 Ga0207641_10146049 3300026088 Bacteria 2138
84 Ga0207676_10116425 3300026095 Bacteria 2246
85 Ga0207674_10020095 3300026116 Bacteria 7223
86 Ga0207674_10044129 3300026116 Bacteria 4594
87 Ga0207674_10100006 3300026116 Bacteria 2882
88 Ga0268266_10168030 3300028379 Bacteria 1989
89 Ga0268264_10033764 3300028381 Bacteria 4206
90 Ga0307515_10000088 3300028794 Bacteria 215810
91 Ga0307515_10016232 3300028794 Bacteria 13648
92 Ga0307515_10022426 3300028794 Bacteria 11127
93 Ga0307515_10067553 3300028794 Bacteria 4928
94 Ga0307513_10000001 3300031456 Bacteria 1660464
95 Ga0307513_10006441 3300031456 Bacteria 15342
96 Ga0307509_10003555 3300031507 Bacteria 23479
97 Ga0307509_10070748 3300031507 Bacteria 3642
98 Ga0307408_100021654 3300031548 Bacteria 4354
99 Ga0307408_100082703 3300031548 Bacteria 2404
100 Ga0307508_10006417 3300031616 Bacteria 11058
101 Ga0307508_10006815 3300031616 Bacteria 10686
102 Ga0307508_10007256 3300031616 Bacteria 10325
103 Ga0316576_10008261 3300031727 Bacteria 6625
104 Ga0307516_10005654 3300031730 Bacteria 14865
105 Ga0307516_10057341 3300031730 Bacteria 3794
106 Ga0307405_10001952 3300031731 Bacteria 8903
107 Ga0307413_10010107 3300031824 Bacteria 4557
108 Ga0307413_10032522 3300031824 Bacteria 2958
109 Ga0307413_10040253 3300031824 Bacteria 2726
110 Ga0307410_10010192 3300031852 Bacteria 5313
111 Ga0307410_10016228 3300031852 Bacteria 4437
112 Ga0307410_10087528 3300031852 Bacteria 2203
113 Ga0307406_10014455 3300031901 Bacteria 4543
114 Ga0307406_10015998 3300031901 Bacteria 4351
115 Ga0307406_10032742 3300031901 Bacteria 3175
116 Ga0307407_10004726 3300031903 Bacteria 5822
117 Ga0307412_10098646 3300031911 Bacteria 2061
118 Ga0307409_100014197 3300031995 Bacteria 5166
119 Ga0307409_100108608 3300031995 Bacteria 2321
120 Ga0307409_100157255 3300031995 Bacteria 1982
121 Ga0307416_100005319 3300032002 Bacteria 7896
122 Ga0307416_100047395 3300032002 Bacteria 3401
123 Ga0307416_100065956 3300032002 Bacteria 2978
124 Ga0307416_100266475 3300032002 Bacteria 1678
125 Ga0307414_10120536 3300032004 Bacteria 2016
126 Ga0307415_100001024 3300032126 Bacteria 12908
127 Ga0307415_100006063 3300032126 Bacteria 6481
128 Ga0307415_100023096 3300032126 Bacteria 3853
129 Ga0307415_100037621 3300032126 Bacteria 3182
130 Ga0307415_100051459 3300032126 Bacteria 2795
131 Ga0307415_100152477 3300032126 Bacteria 1780
132 Ga0373953_0059673 3300035117 Bacteria 1558
133 Ga0373942_0000536 3300035207 Bacteria 10633
134 Ga0316574_0005262 3300035398 Bacteria 6889
135 Ga0373935_0002839 3300035692 Bacteria 9967
136 Ga0373937_0040454 3300036401 Bacteria 4249
137 Ga0316584_0002680 3300036712 Bacteria 11366
138 Ga0395899_0013760 3300037312 Bacteria 6185
139 Ga0395899_0063917 3300037312 Bacteria 2707
140 Ga0395900_0014766 3300037418 Bacteria 7960
141 Ga0395900_0021489 3300037418 Bacteria 6600
142 Ga0395900_0068682 3300037418 Bacteria 3642
143 Ga0395900_0130452 3300037418 Bacteria 2576
144 Ga0395898_0017307 3300037466 Bacteria 7363
145 Ga0395898_0018431 3300037466 Bacteria 7118
146 Ga0395898_0032796 3300037466 Bacteria 5186
147 Ga0395898_0215553 3300037466 Bacteria 1831
148 Ga0395905_0014884 3300037471 Bacteria 7421
149 Ga0395905_0059330 3300037471 Bacteria 3577
150 Ga0395901_0001310 3300038443 Bacteria 26249
151 Ga0395901_0016764 3300038443 Bacteria 7465
152 Ga0395901_0108007 3300038443 Bacteria 2921
153 Ga0436365_0229273 3300039437 Bacteria 3072
154 Ga0439436_0006079 3300041404 Bacteria 3703
155 Ga0451789_0648374 3300041443 Bacteria 1703
156 Ga0451791_0042919 3300041451 Bacteria 3678
157 Ga0451791_0735937 3300041451 Bacteria 3014
158 Ga0451793_0067692 3300041452 Bacteria 7186
159 Ga0451833_0810642 3300041491 Bacteria 1428
160 Ga0451841_1418516 3300041498 Bacteria 2159
161 Ga0451843_0382589 3300041509 Bacteria 5938
162 Ga0439449_0003210 3300042007 Bacteria 6377
163 Ga0439457_000568 3300042014 Bacteria 10805
164 Ga0466969_0031520 3300044656 Bacteria 2698
165 Ga0466972_0013259 3300044658 Bacteria 4139
166 Ga0466972_0034960 3300044658 Bacteria 2460
167 Ga0466965_0035102 3300044683 Bacteria 2456
168 Ga0466966_0000266 3300044684 Bacteria 34363
169 Ga0466961_0000723 3300044693 Bacteria 20772
170 Ga0466961_0055014 3300044693 Bacteria 2538
171 Ga0466961_0089838 3300044693 Bacteria 1940
172 Ga0466963_0026398 3300044694 Bacteria 3715
173 Ga0466963_0038459 3300044694 Bacteria 3128
174 Ga0466970_0006321 3300044765 Bacteria 5915
175 Ga0466970_0014230 3300044765 Bacteria 4082
176 Ga0466970_0029022 3300044765 Bacteria 2910
177 Ga0466957_0002237 3300044842 Bacteria 10378
178 Ga0466957_0030758 3300044842 Bacteria 3206
179 Ga0466960_0010897 3300044901 Bacteria 3786
180 Ga0466960_0026200 3300044901 Bacteria 2646
181 Ga0466960_0027723 3300044901 Bacteria 2587
182 Ga0466958_0001740 3300045836 Bacteria 10527
183 Ga0466958_0068952 3300045836 Bacteria 2162
184 Ga0466967_0083951 3300045976 Bacteria 2881
185 Ga0466967_0104509 3300045976 Bacteria 2593
186 Ga0466967_0235066 3300045976 Bacteria 1746
187 Ga0495629_0123247 3300046459 Bacteria 1805
188 Ga0495629_0131847 3300046459 Bacteria 1741
189 Ga0495641_0093759 3300046461 Bacteria 1341
190 Ga0495662_0018624 3300046476 Bacteria 3361
191 Ga0495606_0001132 3300046507 Bacteria 37971
192 Ga0495630_0032730 3300046517 Bacteria 3876
193 Ga0495668_0000615 3300046616 Bacteria 43050
194 Ga0495625_0008271 3300046660 Bacteria 8895
195 Ga0495626_0000127 3300048091 Bacteria 97134
196 Ga0496100_0121644 3300048903 Bacteria 1827
197 Ga0496102_0100148 3300048905 Bacteria 2691
198 Ga0496102_0138643 3300048905 Bacteria 2280
199 Ga0496104_0003155 3300048907 Bacteria 14192
200 Ga0496104_0108083 3300048907 Bacteria 2665
201 Ga0496105_0071243 3300048908 Bacteria 2873
202 Ga0496109_0004982 3300048912 Bacteria 11090
203 Ga0496110_0070830 3300048913 Bacteria 3090
204 Ga0496111_0001582 3300048914 Bacteria 13150
205 Ga0496111_0013230 3300048914 Bacteria 5609
206 Ga0496112_0007762 3300048915 Bacteria 9549
207 Ga0496112_0041192 3300048915 Bacteria 4517
208 Ga0496112_0121898 3300048915 Bacteria 2578
209 Ga0496112_0207023 3300048915 Bacteria 1919
210 Ga0496113_0002367 3300048916 Bacteria 10927
211 Ga0496113_0021993 3300048916 Bacteria 4504
212 Ga0496114_0000330 3300048917 Bacteria 34389
213 Ga0496114_0078940 3300048917 Bacteria 2777
214 Ga0496114_0080786 3300048917 Bacteria 2746
215 Ga0496114_0152399 3300048917 Bacteria 2006
216 Ga0496126_0086786 3300048929 Bacteria 2758
217 Ga0501031_0022438 3300049568 Bacteria 4114
218 Ga0501032_0038419 3300049569 Bacteria 3260
219 Ga0501032_0043473 3300049569 Bacteria 3042
220 Ga0501034_0045558 3300049571 Bacteria 4432
221 Ga0501036_0031579 3300049572 Bacteria 4475
222 Ga0501036_0101105 3300049572 Bacteria 2439
223 Ga0501036_0178386 3300049572 Bacteria 1789
224 Ga0501037_0001184 3300049573 Bacteria 19269
225 Ga0501037_0014792 3300049573 Bacteria 5740
226 Ga0501038_0003553 3300049574 Bacteria 14508
227 Ga0501038_0026431 3300049574 Bacteria 5170
228 Ga0501039_0023260 3300049575 Bacteria 4756
229 Ga0501042_0038234 3300049578 Bacteria 3408
230 Ga0501043_0045441 3300049579 Bacteria 3454
231 Ga0501046_0000280 3300049580 Bacteria 51719
232 Ga0501046_0000883 3300049580 Bacteria 29184
233 Ga0501046_0023046 3300049580 Bacteria 5126
234 Ga0501047_0002765 3300049581 Bacteria 16668
235 Ga0501047_0083961 3300049581 Bacteria 3061
236 Ga0501048_0001685 3300049582 Bacteria 16844
237 Ga0501067_0049829 3300049583 Bacteria 2321
238 Ga0501074_0060060 3300049590 Bacteria 2738
239 Ga0501035_0002821 3300049822 Bacteria 16810
240 Ga0501044_0009760 3300049823 Bacteria 10441
241 Ga0501044_0156100 3300049823 Bacteria 2262
242 nmdc:mga00v17_8753_c1 3300050491 Bacteria 5453
243 nmdc:mga0yw44_24178_c1 3300050492 Bacteria 3434
244 nmdc:mga05p37_100148_c1 3300050507 Bacteria 3569
245 nmdc:mga05p37_26547_c1 3300050507 Bacteria 7043
246 nmdc:mga05p37_823_c1 3300050507 Bacteria 34775
247 nmdc:mga09592_13042_c1 3300050508 Bacteria 6784
248 nmdc:mga09592_16_c1 3300050508 Bacteria 97518
249 nmdc:mga09592_69538_c1 3300050508 Bacteria 2987
250 nmdc:mga0qj67_16_c1 3300050509 Bacteria 124323
251 nmdc:mga0qj67_290_c1 3300050509 Bacteria 34974
252 nmdc:mga06r32_12190_c2 3300050510 Bacteria 2530
253 nmdc:mga06r32_15277_c1 3300050510 Bacteria 6974
254 nmdc:mga06r32_220029_c1 3300050510 Bacteria 1887
255 nmdc:mga06r32_493_c1 3300050510 Bacteria 34078
256 nmdc:mga06r32_9105_c1 3300050510 Bacteria 8949
257 nmdc:mga08y16_46885_c1 3300050511 Bacteria 4524
258 Ga0500644_0001227 3300053088 Bacteria 7112
259 Ga0500646_0000356 3300053090 Bacteria 13775
260 Ga0500651_0039808 3300053093 Bacteria 2960
261 Ga0500594_0002817 3300053118 Bacteria 3790
262 Ga0500600_0016177 3300053149 Bacteria 4515
263 8003833172 8003830390 Bacteria 6541657
264 2501942736 2501939600 Bacteria 6907073
265 2515493797 2515154088 Bacteria 5526283
266 2515720721 2515154129 Bacteria 5584369
267 2515755188 2515154137 Bacteria 5711575
268 2516085536 2515154202 Bacteria 5471270
269 2516087670 2515154203 Bacteria 5458536
270 2623502086 2622736605 Bacteria 4992138
271 2623586562 2622736626 Bacteria 7181580
272 2644090481 2643221615 Bacteria 5487866
273 2644323391 2643221657 Bacteria 5490246
274 2676481421 2675903059 Bacteria 8644972
275 2753270652 2751185782 Bacteria 11227053
276 2772641786 2772190715 Bacteria 6959372
277 2774394429 2773857762 Bacteria 5971770
278 2795795075 2795385472 Bacteria 6627535
279 2809194718 2808606439 Bacteria 5952208
280 2812353047 2811994878 Bacteria 5992952
281 2831940459 2831935698 Bacteria 5963223
282 2832007769 2832004796 Bacteria 6538017
283 2855671629 2855670206 Bacteria 7120389
284 2855678999 2855676851 Bacteria 7063653
285 2855684248 2855683550 Bacteria 7134265
286 2856860485 2856858025 Bacteria 7255264
287 2857292324 2857288857 Bacteria 7189066
288 2857483854 2857481737 Bacteria 4761446
289 2858852018 2858848962 Bacteria 6963058
290 2858870030 2858868258 Bacteria 7683772
291 2858883517 2858882152 Bacteria 7230291
292 2858890639 2858888857 Bacteria 7060307
293 2858901267 2858895516 Bacteria 7378898
294 2858907510 2858902515 Bacteria 7086037
295 2861524849 2861520306 Bacteria 8348283
296 2866066610 2866065130 Bacteria 6518152
297 2867303943 2867302475 Bacteria 7087181
298 2867313219 2867312974 Bacteria 7058875
299 2867324811 2867319477 Bacteria 7069771
300 2867509446 2867507094 Bacteria 6506033
301 2869052382 2869048445 Bacteria 6875584
302 2869063649 2869061728 Bacteria 7112407
303 2869070236 2869068681 Bacteria 7205615
304 2880493633 2880489317 Bacteria 7096270
305 2880498694 2880495981 Bacteria 7340502
306 2887484647 2887478801 Bacteria 8972725
307 2891972826 2891968417 Bacteria 5821697
308 2902586255 2902582711 Bacteria 6187705
309 2929220692 2929219909 Bacteria 6984360
310 2929227271 2929226422 Bacteria 7248583
311 2932398326 2932398195 Bacteria 3847976
312 2984595647 2984592036 Bacteria 3670284
313 2996227225 2996221748 Bacteria 6799777
314 649811223 649633069 Bacteria 6962533
315 8001782396 8001781756 Bacteria 9586736
316 8003863680 8003856774 Bacteria 7675274
317 8003877432 8003870546 Bacteria 7396674
318 8054706936 8054704163 Bacteria 7247792
319 8054730872 8054727385 Bacteria 7558670
320 8054736036 8054734606 Bacteria 6947278
321 8055415722 8055412473 Bacteria 6257500
322 8056056879 8056054917 Bacteria 5736694
323 8057569859 8057568493 Bacteria 7221719
324 JGI25406J46586_10003111
325 JGI25406J46586_10020248
326 Ga0070683_100002971
327 Ga0070683_100012295
328 Ga0070683_100035730
329 Ga0070660_100079049
330 Ga0070661_100030364
331 Ga0070668_100004461
332 Ga0070675_100000194
333 Ga0070659_100032806
334 Ga0070700_100005482
335 Ga0070662_100026476
336 Ga0070681_10123719
337 Ga0070698_100002871
338 Ga0070679_100024476
339 Ga0070684_100030778
340 Ga0070665_100017622
341 Ga0070665_100145741
342 Ga0070664_100003747
343 Ga0070664_100053840
344 Ga0070664_100108242
345 Ga0068857_100006170
346 Ga0068864_100003191
347 Ga0068863_100094741
348 Ga0068863_100123349
349 Ga0068858_100092142
350 Ga0068860_100047665
351 Ga0068862_100004630
352 Ga0081540_1019486
353 Ga0081539_10000320
354 Ga0081539_10000837
355 Ga0081539_10005629
356 Ga0081539_10007604
357 Ga0081539_10020169
358 Ga0081539_10083121
359 Ga0075365_10005160
360 Ga0075364_10002272
361 Ga0070712_100187816
362 Ga0075428_100000669
363 Ga0075428_100029062
364 Ga0075428_100099735
365 Ga0075428_100223060
366 Ga0075430_100002894
367 Ga0075430_100006087
368 Ga0075431_100000513
369 Ga0075431_100002934
370 Ga0075431_100004909
371 Ga0075431_100026327
372 Ga0075431_100274707
373 Ga0075429_100045172
374 Ga0111539_10007714
375 Ga0105245_10010077
376 Ga0105245_10180558
377 Ga0114129_10000001
378 Ga0114129_10000011
379 Ga0114129_10017732
380 Ga0114129_10172758
381 Ga0105248_10218678
382 Ga0157370_10147088
383 Ga0157369_10013261
384 Ga0163163_10013251
385 Ga0157377_10022686
386 Ga0157379_10123820
387 Ga0206353_10555065
388 Ga0207713_1044712
389 Ga0207705_10023035
390 Ga0207660_10098779
391 Ga0207657_10124216
392 Ga0207652_10032068
393 Ga0207650_10112056
394 Ga0207659_10022279
395 Ga0207687_10005703
396 Ga0207687_10113081
397 Ga0207706_10018954
398 Ga0207711_10090647
399 Ga0207661_10002214
400 Ga0207661_10008993
401 Ga0207661_10010501
402 Ga0207679_10003381
403 Ga0207668_10020493
404 Ga0207677_10052848
405 Ga0207703_10035445
406 Ga0207641_10146049
407 Ga0207676_10116425
408 Ga0207674_10020095
409 Ga0207674_10044129
410 Ga0207674_10100006
411 Ga0268266_10168030
412 Ga0268264_10033764
413 Ga0307515_10000088
414 Ga0307515_10016232
415 Ga0307515_10022426
416 Ga0307515_10067553
417 Ga0307513_10000001
418 Ga0307513_10006441
419 Ga0307509_10003555
420 Ga0307509_10070748
421 Ga0307408_100021654
422 Ga0307408_100082703
423 Ga0307508_10006417
424 Ga0307508_10006815
425 Ga0307508_10007256
426 Ga0316576_10008261
427 Ga0307516_10005654
428 Ga0307516_10057341
429 Ga0307405_10001952
430 Ga0307413_10010107
431 Ga0307413_10032522
432 Ga0307413_10040253
433 Ga0307410_10010192
434 Ga0307410_10016228
435 Ga0307410_10087528
436 Ga0307406_10014455
437 Ga0307406_10015998
438 Ga0307406_10032742
439 Ga0307407_10004726
440 Ga0307412_10098646
441 Ga0307409_100014197
442 Ga0307409_100108608
443 Ga0307409_100157255
444 Ga0307416_100005319
445 Ga0307416_100047395
446 Ga0307416_100065956
447 Ga0307416_100266475
448 Ga0307414_10120536
449 Ga0307415_100001024
450 Ga0307415_100006063
451 Ga0307415_100023096
452 Ga0307415_100037621
453 Ga0307415_100051459
454 Ga0307415_100152477
455 Ga0373953_0059673
456 Ga0373942_0000536
457 Ga0316574_0005262
458 Ga0373935_0002839
459 Ga0373937_0040454
460 Ga0316584_0002680
461 Ga0395899_0013760
462 Ga0395899_0063917
463 Ga0395900_0014766
464 Ga0395900_0021489
465 Ga0395900_0068682
466 Ga0395900_0130452
467 Ga0395898_0017307
468 Ga0395898_0018431
469 Ga0395898_0032796
470 Ga0395898_0215553
471 Ga0395905_0014884
472 Ga0395905_0059330
473 Ga0395901_0001310
474 Ga0395901_0016764
475 Ga0395901_0108007
476 Ga0436365_0229273
477 Ga0439436_0006079
478 Ga0451789_0648374
479 Ga0451791_0042919
480 Ga0451791_0735937
481 Ga0451793_0067692
482 Ga0451833_0810642
483 Ga0451841_1418516
484 Ga0451843_0382589
485 Ga0439449_0003210
486 Ga0439457_000568
487 Ga0466969_0031520
488 Ga0466972_0013259
489 Ga0466972_0034960
490 Ga0466965_0035102
491 Ga0466966_0000266
492 Ga0466961_0000723
493 Ga0466961_0055014
494 Ga0466961_0089838
495 Ga0466963_0026398
496 Ga0466963_0038459
497 Ga0466970_0006321
498 Ga0466970_0014230
499 Ga0466970_0029022
500 Ga0466957_0002237
501 Ga0466957_0030758
502 Ga0466960_0010897
503 Ga0466960_0026200
504 Ga0466960_0027723
505 Ga0466958_0001740
506 Ga0466958_0068952
507 Ga0466967_0083951
508 Ga0466967_0104509
509 Ga0466967_0235066
510 Ga0495629_0123247
511 Ga0495629_0131847
512 Ga0495641_0093759
513 Ga0495662_0018624
514 Ga0495606_0001132
515 Ga0495630_0032730
516 Ga0495668_0000615
517 Ga0495625_0008271
518 Ga0495626_0000127
519 Ga0496100_0121644
520 Ga0496102_0100148
521 Ga0496102_0138643
522 Ga0496104_0003155
523 Ga0496104_0108083
524 Ga0496105_0071243
525 Ga0496109_0004982
526 Ga0496110_0070830
527 Ga0496111_0001582
528 Ga0496111_0013230
529 Ga0496112_0007762
530 Ga0496112_0041192
531 Ga0496112_0121898
532 Ga0496112_0207023
533 Ga0496113_0002367
534 Ga0496113_0021993
535 Ga0496114_0000330
536 Ga0496114_0078940
537 Ga0496114_0080786
538 Ga0496114_0152399
539 Ga0496126_0086786
540 Ga0501031_0022438
541 Ga0501032_0038419
542 Ga0501032_0043473
543 Ga0501034_0045558
544 Ga0501036_0031579
545 Ga0501036_0101105
546 Ga0501036_0178386
547 Ga0501037_0001184
548 Ga0501037_0014792
549 Ga0501038_0003553
550 Ga0501038_0026431
551 Ga0501039_0023260
552 Ga0501042_0038234
553 Ga0501043_0045441
554 Ga0501046_0000280
555 Ga0501046_0000883
556 Ga0501046_0023046
557 Ga0501047_0002765
558 Ga0501047_0083961
559 Ga0501048_0001685
560 Ga0501067_0049829
561 Ga0501074_0060060
562 Ga0501035_0002821
563 Ga0501044_0009760
564 Ga0501044_0156100
565 nmdc:mga00v17_8753_c1
566 nmdc:mga0yw44_24178_c1
567 nmdc:mga05p37_100148_c1
568 nmdc:mga05p37_26547_c1
569 nmdc:mga05p37_823_c1
570 nmdc:mga09592_13042_c1
571 nmdc:mga09592_16_c1
572 nmdc:mga09592_69538_c1
573 nmdc:mga0qj67_16_c1
574 nmdc:mga0qj67_290_c1
575 nmdc:mga06r32_12190_c2
576 nmdc:mga06r32_15277_c1
577 nmdc:mga06r32_220029_c1
578 nmdc:mga06r32_493_c1
579 nmdc:mga06r32_9105_c1
580 nmdc:mga08y16_46885_c1
581 Ga0500644_0001227
582 Ga0500646_0000356
583 Ga0500651_0039808
584 Ga0500594_0002817
585 Ga0500600_0016177
586 8003833172
587 2501942736
588 2515493797
589 2515720721
590 2515755188
591 2516085536
592 2516087670
593 2623502086
594 2623586562
595 2644090481
596 2644323391
597 2676481421
598 2753270652
599 2772641786
600 2774394429
601 2795795075
602 2809194718
603 2812353047
604 2831940459
605 2832007769
606 2855671629
607 2855678999
608 2855684248
609 2856860485
610 2857292324
611 2857483854
612 2858852018
613 2858870030
614 2858883517
615 2858890639
616 2858901267
617 2858907510
618 2861524849
619 2866066610
620 2867303943
621 2867313219
622 2867324811
623 2867509446
624 2869052382
625 2869063649
626 2869070236
627 2880493633
628 2880498694
629 2887484647
630 2891972826
631 2902586255
632 2929220692
633 2929227271
634 2932398326
635 2984595647
636 2996227225
637 649811223
638 8001782396
639 8003863680
640 8003877432
641 8054706936
642 8054730872
643 8054736036
644 8055415722
645 8056056879
646 8057569859

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

177

256

0.96

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

1

325

0.93

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

345

453

0.9

PF01134

GIDA

Glucose inhibited division protein A

1

83

0.86

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

123

309

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xdi-assembly1.cif.gz_A crystal structure of lpda (rv3303c) from mycobacterium tuberculosis 0.9621 1 462
1xdi-assembly1.cif.gz_A crystal structure of lpda (rv3303c) from mycobacterium tuberculosis 0.958 1 462
1ebd-assembly1.cif.gz_B dihydrolipoamide dehydrogenase complexed with the binding domain of the dihydrolipoamide acetylase 0.9543 2 460
2qae-assembly1.cif.gz_B crystal structure analysis of trypanosoma cruzi lipoamide dehydrogenase 0.9524 2 462
1vkz-assembly2.cif.gz_B crystal structure of phosphoribosylamine--glycine ligase (tm1250) from thermotoga maritima at 2.30 a resolution 0.9496 3 30
ID Description Score Start End Superfamily
1xdiB03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9902 342 462 3.30.390.30
af_Q58582_1_364_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9765 3 30 3.50.50.60
1xdiB03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9742 342 462 3.30.390.30
1xdiB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9717 154 272 3.50.50.60
af_P27306_158_276_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9676 165 278 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A387HBP7-F1-model_v4 NAD(P)H dehydrogenase (Quinone) (EC 1.6.5.2) 0.979 1 461 GO:0003955
GO:0050660
AF-A0A0D6QDE4-F1-model_v4 Dihydrolipoyl dehydrogenase, mitochondrial 0.9763 377 462 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A7X7FZV1-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9755 376 462 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A1S1NGD4-F1-model_v4 NAD(P)H-quinone dehydrogenase 0.9748 1 467 GO:0003955
GO:0050660
AF-A0A1S1NGD4-F1-model_v4 NAD(P)H-quinone dehydrogenase 0.9728 1 467 GO:0003955
GO:0050660

Map