F406737

General Info

Members Datasets Scaffolds Average Seq Length
323 220 297 430

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10071926|rootH1_100719261
Length 447
Sequence MNDTIYAPATGAGRAAVAVVRLSGPRAGDAVRALSGDLPKPRRAALRRLVHGGIALDDALVLWFPGPASYTGEDAAEFHVHGGRAVVEALVEALASEGLRLAEPGEFTRRAFENGKLDLTQAEGVADLIDAETDAQRRQALGQLGGALSQRYDRWRQLLVQALAMLEAAVDFPDEELPEDVAARARPGLEALEAEIAAALVDASRGRRVRDGFRIALVGAPNAGKSTLLNALAERDAAIVTSTPGTTRDIIEVPLTLGGYRTLLADTAGLRDTDDAIEAEGVRRARAWAAEADLRLWVIDAATFHVKHAHEQAAIQAGDWAVINKIDLVDGFRLEALREDFATLDLKIVELAARKPGGAEQARDALTRHVVEALSGAEFPAATRIRHAENLTEARAFLLRALSDVGLEVELAAEDVRLAARALSRITGRIDPEDVLDRVFSSFCIGK

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
3 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
4 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
5 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
6 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
7 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
8 2643221583 Caulobacter sp. Root655 Isolate Unclassified
9 2643221584 Caulobacter sp. Root656 Isolate Unclassified
10 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
11 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
12 2643221640 Caulobacter sp. Root342 Isolate Unclassified
13 2643221642 Caulobacter sp. Root343 Isolate Unclassified
14 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
15 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
16 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
17 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
18 2818991435 Caulobacter henricii 536 Isolate Unclassified
19 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
20 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
21 2849560528 Caulobacter zeae 410 Isolate Unclassified
22 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
23 2851153111 Caulobacter radicis 736 Isolate Unclassified
24 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
25 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
26 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
27 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
28 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
29 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
30 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
31 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
32 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
33 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
34 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
35 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
36 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
37 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
38 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
39 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
40 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
41 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
42 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
43 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
44 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
45 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
46 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
47 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
48 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
49 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
54 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
55 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
56 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
60 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
61 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
77 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
82 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
111 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
116 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
130 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
131 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
134 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
135 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
136 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
137 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
138 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
139 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
140 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
143 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
144 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
145 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
146 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
147 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
148 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
149 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
150 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
151 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
152 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
156 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
157 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
158 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
159 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
160 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
176 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
182 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
183 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
186 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
187 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
188 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
189 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
190 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
191 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
192 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
193 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
194 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
195 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
196 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
197 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
198 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
199 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
200 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
201 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
202 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
203 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
204 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
205 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
206 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
207 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
208 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
209 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
210 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
211 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
212 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
213 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
214 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
215 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
216 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
217 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
218 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
219 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
220 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.64
Metatranscriptomes 0.31
Isolates 8.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.7
Nodule 0
Rhizoplane 2.79
Rhizosphere 60.06
Stem 0
Stem Tuber 0
Unclassified 11.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10024917 3300003215 Bacteria 2148
2 rootH1_10071926 3300003316 Bacteria 2498
3 rootL2_10118399 3300003322 Bacteria 2326
4 Ga0055537_1005236 3300003773 Bacteria 3521
5 Ga0055524_1005147 3300003775 Bacteria 5900
6 Ga0055524_1008973 3300003775 Bacteria 4108
7 Ga0055536_1001620 3300003781 Bacteria 13403
8 Ga0055536_1001718 3300003781 Bacteria 12954
9 Ga0055528_1001543 3300003790 Bacteria 13871
10 Ga0055530_10000313 3300003791 Bacteria 44170
11 Ga0055530_10009028 3300003791 Bacteria 3888
12 Ga0055531_10002262 3300003794 Bacteria 13034
13 Ga0055531_10002325 3300003794 Bacteria 12828
14 Ga0055531_10010355 3300003794 Bacteria 4642
15 Ga0065165_1003708 3300005262 Bacteria 10340
16 Ga0065165_1006468 3300005262 Bacteria 6129
17 Ga0070658_10144953 3300005327 Bacteria 1985
18 Ga0070670_100045309 3300005331 Bacteria 3780
19 Ga0070687_100028782 3300005343 Bacteria 2698
20 Ga0070661_100001212 3300005344 Bacteria 18170
21 Ga0070661_100013397 3300005344 Bacteria 5755
22 Ga0070692_10003616 3300005345 Bacteria 6308
23 Ga0070692_10062469 3300005345 Bacteria 1965
24 Ga0070668_100002624 3300005347 Bacteria 13203
25 Ga0070668_100010163 3300005347 Bacteria 6979
26 Ga0070671_100112445 3300005355 Bacteria 2288
27 Ga0070671_100221552 3300005355 Bacteria 1605
28 Ga0070659_100000552 3300005366 Bacteria 27366
29 Ga0070659_100124452 3300005366 Bacteria 2091
30 Ga0070667_100029043 3300005367 Bacteria 4606
31 Ga0070667_100084087 3300005367 Bacteria 2727
32 Ga0070714_100128424 3300005435 Bacteria 2263
33 Ga0070708_100024810 3300005445 Bacteria 5121
34 Ga0070681_10049197 3300005458 Bacteria 4211
35 Ga0070699_100047084 3300005518 Bacteria 3731
36 Ga0068853_100019401 3300005539 Bacteria 5636
37 Ga0068853_100036533 3300005539 Bacteria 4179
38 Ga0070686_100006073 3300005544 Bacteria 6702
39 Ga0070665_100000198 3300005548 Bacteria 105999
40 Ga0070665_100000721 3300005548 Bacteria 44003
41 Ga0070704_100019428 3300005549 Bacteria 4365
42 Ga0068855_100219438 3300005563 Bacteria 2133
43 Ga0068855_100295247 3300005563 Bacteria 1796
44 Ga0070664_100132675 3300005564 Bacteria 2188
45 Ga0070664_100216963 3300005564 Bacteria 1711
46 Ga0068856_100318858 3300005614 Bacteria 1571
47 Ga0068852_100050004 3300005616 Bacteria 3579
48 Ga0068860_100018094 3300005843 Bacteria 6862
49 Ga0075369_10001353 3300006186 Bacteria 8324
50 Ga0068865_100005249 3300006881 Bacteria 7831
51 Ga0075436_100011590 3300006914 Bacteria 6047
52 Ga0075435_100027142 3300007076 Bacteria 4474
53 Ga0099794_10000007 3300007265 Bacteria 128667
54 Ga0105240_10024667 3300009093 Bacteria 7921
55 Ga0105240_10054598 3300009093 Bacteria 5006
56 Ga0105240_10082102 3300009093 Bacteria 3958
57 Ga0105248_10000789 3300009177 Bacteria 35531
58 Ga0105248_10007947 3300009177 Bacteria 11659
59 Ga0105238_10052209 3300009551 Bacteria 4110
60 Ga0105238_10084262 3300009551 Bacteria 3168
61 Ga0105239_10175016 3300010375 Bacteria 2400
62 Ga0157373_10000879 3300013100 Bacteria 23263
63 Ga0157373_10015482 3300013100 Bacteria 5576
64 Ga0157371_10032813 3300013102 Bacteria 3734
65 Ga0157371_10082625 3300013102 Bacteria 2274
66 Ga0157370_10237287 3300013104 Bacteria 1688
67 Ga0157370_10255547 3300013104 Bacteria 1620
68 Ga0157369_10022235 3300013105 Bacteria 7082
69 Ga0157369_10190889 3300013105 Bacteria 2153
70 Ga0157369_10284633 3300013105 Bacteria 1721
71 Ga0157372_10046340 3300013307 Bacteria 4826
72 Ga0157372_10055484 3300013307 Bacteria 4425
73 Ga0157375_10022923 3300013308 Bacteria 5753
74 Ga0206353_10958273 3300020082 Bacteria 2476
75 Ga0213876_10016103 3300021384 Bacteria 3954
76 Ga0209026_1000749 3300025250 Bacteria 18446
77 Ga0209565_1000172 3300025263 Bacteria 84264
78 Ga0209673_1000451 3300025273 Bacteria 69853
79 Ga0209676_1000257 3300025292 Bacteria 112662
80 Ga0209676_1000316 3300025292 Bacteria 94380
81 Ga0209564_1007726 3300025295 Bacteria 5474
82 Ga0209564_1014650 3300025295 Bacteria 3242
83 Ga0209758_1001380 3300025297 Bacteria 28958
84 Ga0209758_1003726 3300025297 Bacteria 13507
85 Ga0209758_1005673 3300025297 Bacteria 9441
86 Ga0209050_1000053 3300025298 Bacteria 349521
87 Ga0209050_1001072 3300025298 Bacteria 33540
88 Ga0209050_1002076 3300025298 Bacteria 18402
89 Ga0209050_1007846 3300025298 Bacteria 5863
90 Ga0209256_1002114 3300025299 Bacteria 17273
91 Ga0209256_1006421 3300025299 Bacteria 6239
92 Ga0209256_1009495 3300025299 Bacteria 4256
93 Ga0209257_1000192 3300025304 Bacteria 151851
94 Ga0209257_1000419 3300025304 Bacteria 81956
95 Ga0209257_1000541 3300025304 Bacteria 64943
96 Ga0209257_1002736 3300025304 Bacteria 16714
97 Ga0209257_1008536 3300025304 Bacteria 5786
98 Ga0207647_10014936 3300025904 Bacteria 5336
99 Ga0207705_10142300 3300025909 Bacteria 1792
100 Ga0207707_10091243 3300025912 Bacteria 2663
101 Ga0207695_10015201 3300025913 Bacteria 9077
102 Ga0207662_10039028 3300025918 Bacteria 2784
103 Ga0207649_10000026 3300025920 Bacteria 177395
104 Ga0207649_10017380 3300025920 Bacteria 4076
105 Ga0207650_10033962 3300025925 Bacteria 3698
106 Ga0207664_10059340 3300025929 Bacteria 3046
107 Ga0207644_10127301 3300025931 Bacteria 1945
108 Ga0207644_10213680 3300025931 Bacteria 1526
109 Ga0207690_10000031 3300025932 Bacteria 154724
110 Ga0207690_10112526 3300025932 Bacteria 1963
111 Ga0207690_10124913 3300025932 Bacteria 1875
112 Ga0207704_10004551 3300025938 Bacteria 6345
113 Ga0207711_10000331 3300025941 Bacteria 50472
114 Ga0207711_10032776 3300025941 Bacteria 4394
115 Ga0207668_10000004 3300025972 Bacteria 201204
116 Ga0207668_10015236 3300025972 Bacteria 4772
117 Ga0207640_10173402 3300025981 Unclassified 1610
118 Ga0207658_10024073 3300025986 Bacteria 4255
119 Ga0207658_10037987 3300025986 Bacteria 3465
120 Ga0207639_10001476 3300026041 Bacteria 15830
121 Ga0207639_10016777 3300026041 Bacteria 5188
122 Ga0207648_10086696 3300026089 Bacteria 2732
123 Ga0207676_10205693 3300026095 Bacteria 1742
124 Ga0207698_10008526 3300026142 Bacteria 6493
125 Ga0209999_1000636 3300027543 Bacteria 5609
126 Ga0209588_1000056 3300027671 Bacteria 41939
127 Ga0268266_10000003 3300028379 Bacteria 1701703
128 Ga0268266_10001373 3300028379 Bacteria 29333
129 Ga0307517_10099755 3300028786 Bacteria 2299
130 Ga0307515_10066409 3300028794 Bacteria 4998
131 Ga0307515_10105008 3300028794 Bacteria 3368
132 Ga0265338_10023968 3300028800 Bacteria 6252
133 Ga0265331_10000008 3300031250 Bacteria 324311
134 Ga0265331_10000067 3300031250 Bacteria 158073
135 Ga0265327_10000036 3300031251 Bacteria 312827
136 Ga0265327_10000331 3300031251 Bacteria 89636
137 Ga0265327_10011420 3300031251 Bacteria 6114
138 Ga0307513_10000178 3300031456 Bacteria 91751
139 Ga0307513_10006957 3300031456 Bacteria 14706
140 Ga0307513_10029439 3300031456 Bacteria 6260
141 Ga0307516_10000144 3300031730 Bacteria 87138
142 Ga0307510_10008808 3300033180 Bacteria 12027
143 Ga0373944_0006302 3300035089 Bacteria 3146
144 Ga0373943_0025456 3300035170 Bacteria 2766
145 Ga0373927_0000111 3300035695 Bacteria 62031
146 Ga0373925_0000209 3300037068 Bacteria 64086
147 Ga0395899_0004063 3300037312 Bacteria 11532
148 Ga0395900_0024324 3300037418 Bacteria 6201
149 Ga0395900_0144222 3300037418 Bacteria 2436
150 Ga0395900_0198805 3300037418 Bacteria 2029
151 Ga0395898_0002796 3300037466 Bacteria 20008
152 Ga0395905_0007745 3300037471 Bacteria 10651
153 Ga0395905_0035812 3300037471 Bacteria 4661
154 Ga0395905_0170160 3300037471 Bacteria 2046
155 Ga0395901_0286500 3300038443 Bacteria 1710
156 Ga0436365_1464659 3300039437 Bacteria 8569
157 Ga0439446_0022852 3300042156 Bacteria 1775
158 Ga0451576_0014722 3300045051 Bacteria 8696
159 Ga0451576_0019753 3300045051 Bacteria 7353
160 Ga0466958_0152348 3300045836 Bacteria 1459
161 Ga0466967_0004702 3300045976 Bacteria 9279
162 Ga0466967_0008739 3300045976 Bacteria 7461
163 Ga0495627_001270 3300046453 Bacteria 15536
164 Ga0495590_0000799 3300046457 Bacteria 14327
165 Ga0495629_0014626 3300046459 Bacteria 5646
166 Ga0495638_0000939 3300046460 Bacteria 29527
167 Ga0495638_0001890 3300046460 Bacteria 18090
168 Ga0495638_0003640 3300046460 Bacteria 12016
169 Ga0495638_0007491 3300046460 Bacteria 7817
170 Ga0495650_0000168 3300046471 Bacteria 145714
171 Ga0495585_0051780 3300046492 Bacteria 2274
172 Ga0495607_0022733 3300046501 Bacteria 3934
173 Ga0495583_0000003 3300046506 Bacteria 709273
174 Ga0495583_0050806 3300046506 Bacteria 1893
175 Ga0495606_0002273 3300046507 Bacteria 22733
176 Ga0495610_0001080 3300046512 Bacteria 24952
177 Ga0495610_0003502 3300046512 Bacteria 12206
178 Ga0495616_0001685 3300046513 Bacteria 15085
179 Ga0495620_0012316 3300046515 Bacteria 4427
180 Ga0495628_0222271 3300046516 Bacteria 1418
181 Ga0495631_0008575 3300046518 Bacteria 5146
182 Ga0495632_0003311 3300046519 Bacteria 11490
183 Ga0495632_0062052 3300046519 Bacteria 1812
184 Ga0495637_0025183 3300046520 Bacteria 2683
185 Ga0495637_0025944 3300046520 Bacteria 2637
186 Ga0495643_0003478 3300046522 Bacteria 11494
187 Ga0495643_0047683 3300046522 Bacteria 2319
188 Ga0495648_0000107 3300046524 Bacteria 104376
189 Ga0495648_0027724 3300046524 Bacteria 3787
190 Ga0495654_0000085 3300046530 Bacteria 107010
191 Ga0495654_0064961 3300046530 Bacteria 1743
192 Ga0495621_0025186 3300046539 Bacteria 1997
193 Ga0495597_0005527 3300046542 Bacteria 6684
194 Ga0495645_0089012 3300046543 Bacteria 2207
195 Ga0495622_0005647 3300046557 Bacteria 5802
196 Ga0495668_0001466 3300046616 Bacteria 22674
197 Ga0495668_0010251 3300046616 Bacteria 5687
198 Ga0495668_0017873 3300046616 Bacteria 4108
199 Ga0495668_0017878 3300046616 Bacteria 4107
200 Ga0495668_0027130 3300046616 Bacteria 3245
201 Ga0495668_0029297 3300046616 Bacteria 3111
202 Ga0495668_0045447 3300046616 Bacteria 2442
203 Ga0495625_0000767 3300046660 Bacteria 44760
204 Ga0495625_0003963 3300046660 Bacteria 14216
205 Ga0495625_0010509 3300046660 Bacteria 7648
206 Ga0495625_0021560 3300046660 Bacteria 4957
207 Ga0495625_0022304 3300046660 Bacteria 4857
208 Ga0495625_0137446 3300046660 Bacteria 1650
209 Ga0495625_0160354 3300046660 Bacteria 1507
210 Ga0495635_0216054 3300046663 Bacteria 1298
211 Ga0495669_0000548 3300046684 Bacteria 16774
212 Ga0495589_0000827 3300046794 Bacteria 19436
213 Ga0495660_0003895 3300046810 Bacteria 9125
214 Ga0495672_0016768 3300047320 Bacteria 4917
215 Ga0495679_004760 3300047446 Bacteria 6151
216 Ga0495673_0000341 3300047469 Bacteria 59080
217 Ga0495673_0001283 3300047469 Bacteria 20512
218 Ga0495673_0002678 3300047469 Bacteria 12281
219 Ga0495686_0001488 3300047472 Bacteria 25389
220 Ga0495686_0008338 3300047472 Bacteria 7618
221 Ga0495686_0011896 3300047472 Bacteria 6116
222 Ga0495686_0015415 3300047472 Bacteria 5219
223 Ga0495593_0018786 3300047673 Bacteria 3881
224 Ga0496104_0184516 3300048907 Bacteria 1997
225 Ga0496106_0027462 3300048909 Bacteria 4239
226 Ga0496106_0134058 3300048909 Bacteria 1944
227 Ga0496107_0007325 3300048910 Bacteria 7606
228 Ga0496108_0013416 3300048911 Bacteria 6683
229 Ga0496109_0004453 3300048912 Bacteria 11699
230 Ga0496115_0003176 3300048918 Bacteria 11807
231 Ga0496115_0019029 3300048918 Bacteria 5281
232 Ga0496115_0051897 3300048918 Bacteria 3289
233 Ga0496117_0035545 3300048920 Bacteria 3738
234 Ga0496118_0016666 3300048921 Bacteria 6731
235 Ga0496119_0047613 3300048922 Bacteria 2666
236 Ga0496121_0000042 3300048924 Bacteria 342304
237 Ga0496121_0000607 3300048924 Bacteria 67089
238 Ga0496124_0024090 3300048927 Bacteria 5541
239 Ga0496126_0088495 3300048929 Bacteria 2727
240 Ga0495678_001166 3300049459 Bacteria 21684
241 Ga0501032_0145180 3300049569 Bacteria 1562
242 Ga0501033_0008559 3300049570 Bacteria 7916
243 Ga0501034_0069770 3300049571 Bacteria 3525
244 Ga0501037_0058855 3300049573 Bacteria 2803
245 Ga0501046_0023399 3300049580 Bacteria 5084
246 Ga0501067_0039806 3300049583 Bacteria 2610
247 Ga0501077_0016532 3300049593 Bacteria 4649
248 Ga0501257_003474 3300049686 Bacteria 3381
249 Ga0501044_0003338 3300049823 Bacteria 18099
250 nmdc:mga0k408_48614_c1 3300050493 Bacteria 2454
251 nmdc:mga07m45_168468_c1 3300050496 Bacteria 1272
252 nmdc:mga0n895_12894_c1 3300050512 Bacteria 7512
253 nmdc:mga0sz30_10984_c1 3300050516 Bacteria 3484
254 Ga0500635_0000051 3300053080 Bacteria 76510
255 Ga0500578_0164015 3300053086 Bacteria 1377
256 Ga0500643_000934 3300053087 Bacteria 18294
257 Ga0500644_0000124 3300053088 Bacteria 47262
258 Ga0500651_0008681 3300053093 Bacteria 5998
259 Ga0500566_0008778 3300053094 Bacteria 5977
260 Ga0500566_0064637 3300053094 Bacteria 2065
261 Ga0500641_0015060 3300053096 Bacteria 2863
262 Ga0500554_001176 3300053102 Bacteria 5071
263 Ga0500555_000725 3300053103 Bacteria 12273
264 Ga0500555_008560 3300053103 Bacteria 2919
265 Ga0500556_0000814 3300053104 Bacteria 18111
266 Ga0500562_000606 3300053108 Bacteria 8652
267 Ga0500562_002083 3300053108 Bacteria 4991
268 Ga0500569_018041 3300053109 Bacteria 1816
269 Ga0500594_0000206 3300053118 Bacteria 14562
270 Ga0500595_010816 3300053119 Bacteria 3605
271 Ga0500608_000011 3300053122 Bacteria 92215
272 Ga0500608_002016 3300053122 Bacteria 7276
273 Ga0500608_048675 3300053122 Bacteria 2037
274 Ga0500614_002591 3300053123 Bacteria 4009
275 Ga0500618_000159 3300053125 Bacteria 56114
276 Ga0500655_010299 3300053133 Bacteria 1688
277 Ga0500658_0005645 3300053134 Bacteria 4654
278 Ga0500559_0000009 3300053136 Bacteria 174153
279 Ga0500559_0001618 3300053136 Bacteria 12519
280 Ga0500559_0003202 3300053136 Bacteria 8138
281 Ga0500559_0012432 3300053136 Bacteria 3618
282 Ga0500564_000063 3300053138 Bacteria 28411
283 Ga0500577_0000311 3300053142 Bacteria 12547
284 Ga0500590_026274 3300053148 Bacteria 3020
285 Ga0500616_0005541 3300053153 Bacteria 8550
286 Ga0500620_009104 3300053155 Bacteria 2547
287 Ga0500622_0000643 3300053156 Bacteria 31235
288 Ga0500622_0005642 3300053156 Bacteria 7455
289 Ga0500622_0015548 3300053156 Bacteria 4074
290 Ga0500636_0011846 3300053177 Bacteria 5107
291 Ga0500637_0001628 3300053178 Bacteria 9633
292 Ga0500576_022747 3300053725 Bacteria 2862
293 Ga0500625_031716 3300053729 Bacteria 2508
294 Ga0500645_000539 3300053730 Bacteria 25211
295 Ga0500645_001528 3300053730 Bacteria 11575
296 Ga0500645_003026 3300053730 Bacteria 7089
297 Ga0500596_002924 3300053735 Bacteria 3309

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_0014722 Ga0451576_0014722_3861_4913 342
2 3300050512 nmdc:mga0n895_12894_c1 nmdc:mga0n895_12894_c1_2680_3732 342
3 3300007076 Ga0075435_100027142 Ga0075435_1000271424 353
4 3300050496 nmdc:mga07m45_168468_c1 nmdc:mga07m45_168468_c1_50_1135 359
5 3300031250 Ga0265331_10000067 Ga0265331_1000006749 362
6 3300045836 Ga0466958_0152348 Ga0466958_0152348_294_1403 367
7 3300005563 Ga0068855_100295247 Ga0068855_1002952472 379
8 3300005564 Ga0070664_100132675 Ga0070664_1001326753 379
9 3300005616 Ga0068852_100050004 Ga0068852_1000500042 379
10 3300025904 Ga0207647_10014936 Ga0207647_100149364 379
11 3300025909 Ga0207705_10142300 Ga0207705_101423002 379
12 3300025920 Ga0207649_10017380 Ga0207649_100173803 379
13 3300025932 Ga0207690_10112526 Ga0207690_101125262 379
14 3300025981 Ga0207640_10173402 Ga0207640_101734022 379
15 3300026041 Ga0207639_10001476 Ga0207639_100014765 379
16 3300026142 Ga0207698_10008526 Ga0207698_100085266 379
17 3300046663 Ga0495635_0216054 Ga0495635_0216054_77_1219 379
18 3300005518 Ga0070699_100047084 Ga0070699_1000470842 381
19 3300006914 Ga0075436_100011590 Ga0075436_1000115907 384
20 3300005445 Ga0070708_100024810 Ga0070708_1000248102 385
21 3300007265 Ga0099794_10000007 Ga0099794_1000000799 385
22 3300027671 Ga0209588_1000056 Ga0209588_100005632 385
23 3300046539 Ga0495621_0025186 Ga0495621_0025186_426_1604 386
24 3300053133 Ga0500655_010299 Ga0500655_010299_23_1201 391
25 3300005435 Ga0070714_100128424 Ga0070714_1001284242 395
26 3300025929 Ga0207664_10059340 Ga0207664_100593403 395
27 3300037418 Ga0395900_0198805 Ga0395900_0198805_431_1705 396
28 3300038443 Ga0395901_0286500 Ga0395901_0286500_36_1310 396
29 3300005345 Ga0070692_10062469 Ga0070692_100624692 397
30 3300005563 Ga0068855_100219438 Ga0068855_1002194382 397
31 3300005343 Ga0070687_100028782 Ga0070687_1000287822 398
32 3300005544 Ga0070686_100006073 Ga0070686_1000060732 398
33 3300005549 Ga0070704_100019428 Ga0070704_1000194282 398
34 3300013307 Ga0157372_10055484 Ga0157372_100554844 398
35 3300025918 Ga0207662_10039028 Ga0207662_100390282 398
36 3300026089 Ga0207648_10086696 Ga0207648_100866962 398
37 3300009177 Ga0105248_10000789 Ga0105248_1000078912 401
38 3300025941 Ga0207711_10032776 Ga0207711_100327762 401
39 3300048920 Ga0496117_0035545 Ga0496117_0035545_1867_3171 401
40 3300048922 Ga0496119_0047613 Ga0496119_0047613_1150_2454 401
41 3300048924 Ga0496121_0000042 Ga0496121_0000042_153995_155299 401
42 3300013104 Ga0157370_10255547 Ga0157370_102555472 402
43 3300045051 Ga0451576_0019753 Ga0451576_0019753_5148_6398 402
44 3300048921 Ga0496118_0016666 Ga0496118_0016666_3308_4612 402
45 3300013102 Ga0157371_10032813 Ga0157371_100328132 404
46 3300013105 Ga0157369_10190889 Ga0157369_101908892 404
47 3300037471 Ga0395905_0170160 Ga0395905_0170160_312_1586 404
48 3300005345 Ga0070692_10003616 Ga0070692_100036165 406
49 3300046459 Ga0495629_0014626 Ga0495629_0014626_614_1918 406
50 3300046506 Ga0495583_0050806 Ga0495583_0050806_373_1677 406
51 3300046522 Ga0495643_0003478 Ga0495643_0003478_3796_5100 406
52 3300046557 Ga0495622_0005647 Ga0495622_0005647_3490_4794 406
53 3300047673 Ga0495593_0018786 Ga0495593_0018786_863_2167 406
54 3300053093 Ga0500651_0008681 Ga0500651_0008681_770_2074 406
55 3300053094 Ga0500566_0008778 Ga0500566_0008778_1736_3040 406
56 3300053109 Ga0500569_018041 Ga0500569_018041_466_1770 406
57 3300053119 Ga0500595_010816 Ga0500595_010816_614_1918 406
58 3300053122 Ga0500608_002016 Ga0500608_002016_4261_5565 406
59 3300053136 Ga0500559_0003202 Ga0500559_0003202_1634_2938 406
60 3300053148 Ga0500590_026274 Ga0500590_026274_545_1849 406
61 3300053155 Ga0500620_009104 Ga0500620_009104_843_2147 406
62 3300053725 Ga0500576_022747 Ga0500576_022747_1087_2391 406
63 3300053729 Ga0500625_031716 Ga0500625_031716_412_1716 406
64 3300053735 Ga0500596_002924 Ga0500596_002924_963_2267 406
65 3300031730 Ga0307516_10000144 Ga0307516_1000014445 408
66 3300005331 Ga0070670_100045309 Ga0070670_1000453092 409
67 3300005344 Ga0070661_100001212 Ga0070661_1000012129 409
68 3300005367 Ga0070667_100084087 Ga0070667_1000840874 409
69 3300009093 Ga0105240_10082102 Ga0105240_100821023 409
70 3300025920 Ga0207649_10000026 Ga0207649_100000269 409
71 3300025925 Ga0207650_10033962 Ga0207650_100339624 409
72 3300025986 Ga0207658_10037987 Ga0207658_100379872 409
73 3300049580 Ga0501046_0023399 Ga0501046_0023399_2456_3754 409
74 3300031251 Ga0265327_10011420 Ga0265327_100114206 412
75 3300053086 Ga0500578_0164015 Ga0500578_0164015_57_1301 413
76 3300005347 Ga0070668_100010163 Ga0070668_1000101636 415
77 3300025972 Ga0207668_10015236 Ga0207668_100152362 415
78 3300006881 Ga0068865_100005249 Ga0068865_1000052495 416
79 3300025938 Ga0207704_10004551 Ga0207704_100045513 416
80 3300046616 Ga0495668_0029297 Ga0495668_0029297_376_1680 417
81 3300005539 Ga0068853_100036533 Ga0068853_1000365332 419
82 3300005843 Ga0068860_100018094 Ga0068860_1000180942 419
83 3300026041 Ga0207639_10016777 Ga0207639_100167772 419
84 3300048911 Ga0496108_0013416 Ga0496108_0013416_3719_4993 419
85 3300020082 Ga0206353_10958273 Ga0206353_109582732 420
86 3300037418 Ga0395900_0144222 Ga0395900_0144222_859_2136 420
87 3300037471 Ga0395905_0035812 Ga0395905_0035812_1577_2854 420
88 3300005327 Ga0070658_10144953 Ga0070658_101449532 421
89 3300005344 Ga0070661_100013397 Ga0070661_1000133973 421
90 3300005539 Ga0068853_100019401 Ga0068853_1000194013 421
91 3300005614 Ga0068856_100318858 Ga0068856_1003188582 421
92 3300009093 Ga0105240_10024667 Ga0105240_100246677 421
93 3300009551 Ga0105238_10084262 Ga0105238_100842622 421
94 3300013102 Ga0157371_10082625 Ga0157371_100826252 421
95 3300013104 Ga0157370_10237287 Ga0157370_102372872 421
96 3300013105 Ga0157369_10022235 Ga0157369_100222356 421
97 3300013105 Ga0157369_10284633 Ga0157369_102846332 421
98 3300013307 Ga0157372_10046340 Ga0157372_100463405 421
99 3300021384 Ga0213876_10016103 Ga0213876_100161033 421
100 3300037312 Ga0395899_0004063 Ga0395899_0004063_9334_10614 421
101 3300037418 Ga0395900_0024324 Ga0395900_0024324_1319_2599 421
102 3300037466 Ga0395898_0002796 Ga0395898_0002796_11489_12769 421
103 3300037471 Ga0395905_0007745 Ga0395905_0007745_1205_2485 421
104 3300039437 Ga0436365_1464659 Ga0436365_1464659_5435_6781 421
105 3300045976 Ga0466967_0004702 Ga0466967_0004702_7287_8570 421
106 3300045976 Ga0466967_0008739 Ga0466967_0008739_2936_4216 421
107 3300047469 Ga0495673_0001283 Ga0495673_0001283_2381_3718 421
108 3300049686 Ga0501257_003474 Ga0501257_003474_992_2326 422
109 3300028786 Ga0307517_10099755 Ga0307517_100997552 423
110 3300031456 Ga0307513_10029439 Ga0307513_100294397 423
111 3300053080 Ga0500635_0000051 Ga0500635_0000051_52847_54151 423
112 3300053177 Ga0500636_0011846 Ga0500636_0011846_1507_2811 423
113 3300053178 Ga0500637_0001628 Ga0500637_0001628_2980_4284 423
114 3300027543 Ga0209999_1000636 Ga0209999_10006362 424
115 3300053088 Ga0500644_0000124 Ga0500644_0000124_14802_16139 424
116 iso_pu_bacteria 2928531327 2928532174 424
117 3300013100 Ga0157373_10015482 Ga0157373_100154824 425
118 3300031250 Ga0265331_10000008 Ga0265331_10000008134 425
119 3300031251 Ga0265327_10000036 Ga0265327_1000003614 425
120 3300053096 Ga0500641_0015060 Ga0500641_0015060_876_2213 425
121 3300005458 Ga0070681_10049197 Ga0070681_100491972 426
122 3300025912 Ga0207707_10091243 Ga0207707_100912432 426
123 3300046524 Ga0495648_0000107 Ga0495648_0000107_15389_16726 426
124 3300053138 Ga0500564_000063 Ga0500564_000063_13500_14837 426
125 3300049583 Ga0501067_0039806 Ga0501067_0039806_1228_2550 428
126 3300050493 nmdc:mga0k408_48614_c1 nmdc:mga0k408_48614_c1_1141_2430 428
127 3300053136 Ga0500559_0001618 Ga0500559_0001618_2536_3879 429
128 3300009093 Ga0105240_10054598 Ga0105240_100545981 430
129 3300046522 Ga0495643_0047683 Ga0495643_0047683_40_1335 430
130 3300005347 Ga0070668_100002624 Ga0070668_10000262411 432
131 3300005355 Ga0070671_100112445 Ga0070671_1001124452 432
132 3300005355 Ga0070671_100221552 Ga0070671_1002215521 432
133 3300005367 Ga0070667_100029043 Ga0070667_1000290434 432
134 3300005548 Ga0070665_100000198 Ga0070665_10000019835 432
135 3300005564 Ga0070664_100216963 Ga0070664_1002169632 432
136 3300009177 Ga0105248_10007947 Ga0105248_1000794712 432
137 3300013308 Ga0157375_10022923 Ga0157375_100229236 432
138 3300025913 Ga0207695_10015201 Ga0207695_100152018 432
139 3300025931 Ga0207644_10127301 Ga0207644_101273012 432
140 3300025931 Ga0207644_10213680 Ga0207644_102136802 432
141 3300025941 Ga0207711_10000331 Ga0207711_1000033148 432
142 3300025972 Ga0207668_10000004 Ga0207668_1000000488 432
143 3300025986 Ga0207658_10024073 Ga0207658_100240732 432
144 3300026095 Ga0207676_10205693 Ga0207676_102056932 432
145 3300028379 Ga0268266_10001373 Ga0268266_1000137311 432
146 3300031456 Ga0307513_10006957 Ga0307513_100069579 432
147 3300033180 Ga0307510_10008808 Ga0307510_100088084 432
148 3300035089 Ga0373944_0006302 Ga0373944_0006302_532_1836 432
149 3300035170 Ga0373943_0025456 Ga0373943_0025456_609_1913 432
150 3300035695 Ga0373927_0000111 Ga0373927_0000111_15381_16685 432
151 3300037068 Ga0373925_0000209 Ga0373925_0000209_47415_48719 432
152 3300046660 Ga0495625_0160354 Ga0495625_0160354_170_1474 432
153 3300048907 Ga0496104_0184516 Ga0496104_0184516_194_1498 432
154 3300048909 Ga0496106_0134058 Ga0496106_0134058_233_1537 432
155 3300048912 Ga0496109_0004453 Ga0496109_0004453_4330_5634 432
156 3300049569 Ga0501032_0145180 Ga0501032_0145180_118_1422 432
157 3300053087 Ga0500643_000934 Ga0500643_000934_12906_14246 432
158 3300053103 Ga0500555_008560 Ga0500555_008560_1466_2770 432
159 3300049593 Ga0501077_0016532 Ga0501077_0016532_3002_4324 434
160 3300031456 Ga0307513_10000178 Ga0307513_1000017876 436
161 3300046684 Ga0495669_0000548 Ga0495669_0000548_10943_12280 436
162 3300003322 rootL2_10118399 rootL2_101183992 438
163 3300005366 Ga0070659_100124452 Ga0070659_1001244521 438
164 3300009551 Ga0105238_10052209 Ga0105238_100522092 438
165 3300025932 Ga0207690_10124913 Ga0207690_101249133 438
166 3300049570 Ga0501033_0008559 Ga0501033_0008559_3344_4669 438
167 3300049571 Ga0501034_0069770 Ga0501034_0069770_1976_3301 438
168 3300049573 Ga0501037_0058855 Ga0501037_0058855_220_1545 438
169 3300049823 Ga0501044_0003338 Ga0501044_0003338_3414_4739 438
170 iso_pu_bacteria 2643221598 2643999645 438
171 iso_pu_bacteria 2643221614 2644087631 438
172 iso_pu_bacteria 2643221661 2644344325 438
173 iso_pu_bacteria 2643221666 2644366990 438
174 3300013100 Ga0157373_10000879 Ga0157373_100008796 440
175 iso_pu_bacteria 2582581279 2585149742 440
176 iso_pu_bacteria 2585428106 2587920023 440
177 iso_pu_bacteria 2643221640 2644223345 440
178 iso_pu_bacteria 2643221642 2644237087 440
179 iso_pu_bacteria 2791355048 2792460840 440
180 iso_pu_bacteria 2843744320 2843745500 440
181 iso_pu_bacteria 2849560528 2849561114 440
182 iso_pu_bacteria 2849573788 2849578580 440
183 iso_pu_bacteria 2851153111 2851157150 440
184 iso_pu_bacteria 2857504554 2857505722 440
185 iso_pu_bacteria 2898329390 2898332808 440
186 iso_pu_bacteria 2510917020 2511124967 442
187 iso_pu_bacteria 2582581280 2585151183 442
188 iso_pu_bacteria 2582581293 2585197054 442
189 iso_pu_bacteria 2643221545 2643747610 442
190 iso_pu_bacteria 2643221552 2643781772 442
191 iso_pu_bacteria 2643221583 2643924079 442
192 iso_pu_bacteria 2643221584 2643931961 442
193 iso_pu_bacteria 2643221691 2644507008 442
194 iso_pu_bacteria 2818991435 2819538260 442
195 iso_pu_bacteria 2818991454 2819647170 442
196 3300003791 Ga0055530_10000313 Ga0055530_1000031314 443
197 3300003794 Ga0055531_10010355 Ga0055531_100103554 443
198 3300005262 Ga0065165_1006468 Ga0065165_10064681 443
199 3300005366 Ga0070659_100000552 Ga0070659_10000055211 443
200 3300005548 Ga0070665_100000721 Ga0070665_1000007214 443
201 3300010375 Ga0105239_10175016 Ga0105239_101750163 443
202 3300025250 Ga0209026_1000749 Ga0209026_100074911 443
203 3300025297 Ga0209758_1001380 Ga0209758_100138012 443
204 3300025298 Ga0209050_1000053 Ga0209050_100005380 443
205 3300025304 Ga0209257_1000419 Ga0209257_100041968 443
206 3300025304 Ga0209257_1002736 Ga0209257_100273613 443
207 3300025932 Ga0207690_10000031 Ga0207690_1000003192 443
208 3300028379 Ga0268266_10000003 Ga0268266_100000031447 443
209 3300031251 Ga0265327_10000331 Ga0265327_1000033192 443
210 3300046516 Ga0495628_0222271 Ga0495628_0222271_10_1347 443
211 3300046543 Ga0495645_0089012 Ga0495645_0089012_826_2163 443
212 3300048918 Ga0496115_0003176 Ga0496115_0003176_1452_2789 443
213 3300053108 Ga0500562_000606 Ga0500562_000606_2425_3762 443
214 3300053730 Ga0500645_000539 Ga0500645_000539_15380_16717 443
215 3300003781 Ga0055536_1001620 Ga0055536_10016205 444
216 3300003781 Ga0055536_1001718 Ga0055536_10017188 444
217 3300003791 Ga0055530_10009028 Ga0055530_100090283 444
218 3300003794 Ga0055531_10002262 Ga0055531_100022628 444
219 3300006186 Ga0075369_10001353 Ga0075369_100013535 444
220 3300025292 Ga0209676_1000257 Ga0209676_100025719 444
221 3300025292 Ga0209676_1000316 Ga0209676_100031684 444
222 3300025295 Ga0209564_1014650 Ga0209564_10146502 444
223 3300025298 Ga0209050_1001072 Ga0209050_10010729 444
224 3300025298 Ga0209050_1002076 Ga0209050_10020769 444
225 3300025299 Ga0209256_1006421 Ga0209256_10064212 444
226 3300025304 Ga0209257_1000541 Ga0209257_100054160 444
227 3300025304 Ga0209257_1008536 Ga0209257_10085365 444
228 3300028794 Ga0307515_10105008 Ga0307515_101050082 444
229 3300046457 Ga0495590_0000799 Ga0495590_0000799_9967_11310 444
230 3300046460 Ga0495638_0001890 Ga0495638_0001890_13728_15071 444
231 3300046518 Ga0495631_0008575 Ga0495631_0008575_2621_3964 444
232 3300046520 Ga0495637_0025944 Ga0495637_0025944_409_1752 444
233 3300046542 Ga0495597_0005527 Ga0495597_0005527_2930_4270 444
234 3300046616 Ga0495668_0001466 Ga0495668_0001466_17748_19088 444
235 3300046616 Ga0495668_0010251 Ga0495668_0010251_1060_2403 444
236 3300046616 Ga0495668_0045447 Ga0495668_0045447_538_1878 444
237 3300046660 Ga0495625_0010509 Ga0495625_0010509_605_1945 444
238 3300047472 Ga0495686_0001488 Ga0495686_0001488_14168_15511 444
239 3300047472 Ga0495686_0008338 Ga0495686_0008338_2432_3772 444
240 3300048918 Ga0496115_0051897 Ga0496115_0051897_1248_2588 444
241 3300048927 Ga0496124_0024090 Ga0496124_0024090_3297_4637 444
242 3300048929 Ga0496126_0088495 Ga0496126_0088495_595_1935 444
243 3300049459 Ga0495678_001166 Ga0495678_001166_9839_11182 444
244 3300050516 nmdc:mga0sz30_10984_c1 nmdc:mga0sz30_10984_c1_38_1378 444
245 3300053103 Ga0500555_000725 Ga0500555_000725_2390_3733 444
246 3300053108 Ga0500562_002083 Ga0500562_002083_2031_3374 444
247 3300053118 Ga0500594_0000206 Ga0500594_0000206_9891_11234 444
248 3300053122 Ga0500608_000011 Ga0500608_000011_24573_25913 444
249 3300053136 Ga0500559_0012432 Ga0500559_0012432_2267_3607 444
250 3300053156 Ga0500622_0000643 Ga0500622_0000643_6176_7519 444
251 3300053156 Ga0500622_0015548 Ga0500622_0015548_2530_3870 444
252 3300028800 Ga0265338_10023968 Ga0265338_100239686 445
253 3300003215 JGI25153J46596_10024917 JGI25153J46596_100249172 446
254 3300003316 rootH1_10071926 rootH1_100719261 446
255 3300003773 Ga0055537_1005236 Ga0055537_10052362 446
256 3300003775 Ga0055524_1005147 Ga0055524_10051473 446
257 3300003775 Ga0055524_1008973 Ga0055524_10089734 446
258 3300003790 Ga0055528_1001543 Ga0055528_100154311 446
259 3300003794 Ga0055531_10002325 Ga0055531_100023254 446
260 3300005262 Ga0065165_1003708 Ga0065165_10037087 446
261 3300025263 Ga0209565_1000172 Ga0209565_100017281 446
262 3300025273 Ga0209673_1000451 Ga0209673_100045149 446
263 3300025295 Ga0209564_1007726 Ga0209564_10077262 446
264 3300025297 Ga0209758_1003726 Ga0209758_10037269 446
265 3300025297 Ga0209758_1005673 Ga0209758_10056738 446
266 3300025298 Ga0209050_1007846 Ga0209050_10078461 446
267 3300025299 Ga0209256_1002114 Ga0209256_10021145 446
268 3300025299 Ga0209256_1009495 Ga0209256_10094953 446
269 3300025304 Ga0209257_1000192 Ga0209257_100019256 446
270 3300028794 Ga0307515_10066409 Ga0307515_100664094 446
271 3300042156 Ga0439446_0022852 Ga0439446_0022852_372_1715 446
272 3300046453 Ga0495627_001270 Ga0495627_001270_13795_15138 446
273 3300046460 Ga0495638_0000939 Ga0495638_0000939_13537_14880 446
274 3300046460 Ga0495638_0003640 Ga0495638_0003640_1417_2760 446
275 3300046460 Ga0495638_0007491 Ga0495638_0007491_4010_5353 446
276 3300046471 Ga0495650_0000168 Ga0495650_0000168_58568_59911 446
277 3300046492 Ga0495585_0051780 Ga0495585_0051780_661_2004 446
278 3300046501 Ga0495607_0022733 Ga0495607_0022733_1915_3258 446
279 3300046506 Ga0495583_0000003 Ga0495583_0000003_528200_529543 446
280 3300046507 Ga0495606_0002273 Ga0495606_0002273_11192_12535 446
281 3300046512 Ga0495610_0001080 Ga0495610_0001080_9078_10421 446
282 3300046512 Ga0495610_0003502 Ga0495610_0003502_1452_2795 446
283 3300046513 Ga0495616_0001685 Ga0495616_0001685_3592_4935 446
284 3300046515 Ga0495620_0012316 Ga0495620_0012316_1127_2470 446
285 3300046519 Ga0495632_0003311 Ga0495632_0003311_2542_3885 446
286 3300046519 Ga0495632_0062052 Ga0495632_0062052_250_1593 446
287 3300046520 Ga0495637_0025183 Ga0495637_0025183_234_1577 446
288 3300046524 Ga0495648_0027724 Ga0495648_0027724_2084_3427 446
289 3300046530 Ga0495654_0000085 Ga0495654_0000085_55759_57102 446
290 3300046530 Ga0495654_0064961 Ga0495654_0064961_205_1548 446
291 3300046616 Ga0495668_0017873 Ga0495668_0017873_1804_3147 446
292 3300046616 Ga0495668_0017878 Ga0495668_0017878_1804_3147 446
293 3300046616 Ga0495668_0027130 Ga0495668_0027130_944_2287 446
294 3300046660 Ga0495625_0000767 Ga0495625_0000767_3575_4918 446
295 3300046660 Ga0495625_0003963 Ga0495625_0003963_9887_11230 446
296 3300046660 Ga0495625_0021560 Ga0495625_0021560_2442_3785 446
297 3300046660 Ga0495625_0022304 Ga0495625_0022304_2734_4077 446
298 3300046660 Ga0495625_0137446 Ga0495625_0137446_57_1400 446
299 3300046794 Ga0495589_0000827 Ga0495589_0000827_14002_15345 446
300 3300046810 Ga0495660_0003895 Ga0495660_0003895_5514_6857 446
301 3300047320 Ga0495672_0016768 Ga0495672_0016768_1667_3010 446
302 3300047446 Ga0495679_004760 Ga0495679_004760_2817_4160 446
303 3300047469 Ga0495673_0000341 Ga0495673_0000341_46380_47723 446
304 3300047469 Ga0495673_0002678 Ga0495673_0002678_2638_3981 446
305 3300047472 Ga0495686_0011896 Ga0495686_0011896_2436_3779 446
306 3300047472 Ga0495686_0015415 Ga0495686_0015415_317_1660 446
307 3300048909 Ga0496106_0027462 Ga0496106_0027462_639_1982 446
308 3300048910 Ga0496107_0007325 Ga0496107_0007325_3868_5211 446
309 3300048918 Ga0496115_0019029 Ga0496115_0019029_1269_2612 446
310 3300048924 Ga0496121_0000607 Ga0496121_0000607_64780_66123 446
311 3300053094 Ga0500566_0064637 Ga0500566_0064637_623_1966 446
312 3300053102 Ga0500554_001176 Ga0500554_001176_1500_2843 446
313 3300053104 Ga0500556_0000814 Ga0500556_0000814_3410_4753 446
314 3300053122 Ga0500608_048675 Ga0500608_048675_647_1990 446
315 3300053123 Ga0500614_002591 Ga0500614_002591_1928_3271 446
316 3300053125 Ga0500618_000159 Ga0500618_000159_19325_20668 446
317 3300053134 Ga0500658_0005645 Ga0500658_0005645_300_1643 446
318 3300053136 Ga0500559_0000009 Ga0500559_0000009_82927_84270 446
319 3300053142 Ga0500577_0000311 Ga0500577_0000311_8595_9938 446
320 3300053153 Ga0500616_0005541 Ga0500616_0005541_7158_8501 446
321 3300053156 Ga0500622_0005642 Ga0500622_0005642_2269_3612 446
322 3300053730 Ga0500645_001528 Ga0500645_001528_9897_11240 446
323 3300053730 Ga0500645_003026 Ga0500645_003026_253_1596 446

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10396

TrmE_N

GTP-binding protein TrmE N-terminus

4

116

0.95

PF12631

MnmE_helical

MnmE helical domain

119

444

0.93

PF02421

FeoB_N

Ferrous iron transport protein B

213

366

0.86

PF01926

MMR_HSR1

50S ribosome-binding GTPase

214

326

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9558 2 115
1xzp-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima 0.9467 1 117
1xzq-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima complexed with 5-formyl-thf 0.9241 2 115
1xzp-assembly1.cif.gz_B structure of the gtp-binding protein trme from thermotoga maritima 0.8419 1 117
3gei-assembly2.cif.gz_C crystal structure of mnme from chlorobium tepidum in complex with gcp 0.8201 3 446
ID Description Score Start End Superfamily
af_Q923K4_29_152_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.976 3 115 3.30.1360.120
af_Q9UTE7_14_142_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9752 3 115 3.30.1360.120
af_Q9XTZ1_1_119_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9654 2 117 3.30.1360.120
af_P25522_1_121_3.30.1360.120 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9582 2 117 3.30.1360.120
1xzqB00 Alpha Beta;2-Layer Sandwich;Gyrase A; domain 2;Probable tRNA modification gtpase trme; domain 1 0.9558 2 115 3.30.1360.120
ID Description Score Start End GO Terms
AF-A0A3C0NXD6-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9766 2 143 GO:0002098
GO:0005525
GO:0005829
GO:0030488
AF-A0A355YCK9-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9736 2 119 GO:0002098
GO:0005525
GO:0005829
GO:0030488
AF-A0A523P3F8-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9703 2 151 GO:0002098
GO:0005525
GO:0005829
GO:0030488
AF-A0A014DS15-F1-model_v4 deleted 0.9683 3 138
AF-A0A348UUX7-F1-model_v4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.9673 1 100 GO:0002098
GO:0005525
GO:0005829
GO:0030488

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pLDDT pTM Quality
85.22 0.79 High
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Predicted Structure (AlphaFold2)

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